BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126006.11 + phase: 0
(325 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CO979922 216 9e-57
TC232199 similar to GB|AAP13430.1|30023794|BT006322 At3g54390 {A... 190 7e-49
TC234634 homologue to GB|AAP13430.1|30023794|BT006322 At3g54390 ... 180 9e-46
TC234814 similar to GB|AAP13430.1|30023794|BT006322 At3g54390 {A... 179 1e-45
BI969409 140 8e-34
TC218891 homologue to UP|GAC1_YEAST (P28006) Protein phosphatase... 120 1e-27
TC228286 weakly similar to GB|AAH20129.1|18044890|BC020129 Robo4... 91 5e-19
TC205836 83 2e-16
TC208994 similar to UP|Q8W3M8 (Q8W3M8) 6b-interacting protein 1,... 77 8e-15
TC221495 similar to UP|Q8W3M8 (Q8W3M8) 6b-interacting protein 1,... 73 2e-13
TC224157 weakly similar to UP|Q6YTS9 (Q6YTS9) Proline-rich prote... 70 1e-12
TC223010 weakly similar to UP|Q08196 (Q08196) Cysteine-rich exte... 62 3e-10
BQ296694 similar to GP|14030681|gb| AT3g10030/T22K18_15 {Arabido... 57 1e-08
TC228285 52 3e-07
TC228287 49 2e-06
TC205835 48 5e-06
TC216648 weakly similar to UP|Q9FFQ8 (Q9FFQ8) Emb|CAB62360.1, pa... 39 0.004
BM731493 38 0.005
TC231472 homologue to UP|Q9FLZ6 (Q9FLZ6) Emb|CAB62594.1, partial... 36 0.021
TC203439 weakly similar to UP|Q9LX02 (Q9LX02) ESTs AU082316(E336... 32 0.39
>CO979922
Length = 826
Score = 216 bits (551), Expect = 9e-57
Identities = 122/192 (63%), Positives = 146/192 (75%), Gaps = 2/192 (1%)
Frame = -1
Query: 136 NNQAGLVLLEPSSLVMSHAQEEVHQPLVPPPITTAQNSHGSNGVDKLI-KEDEIETKSSD 194
+NQA LVLLEP V PPPI AQNS+GSNGV++L+ KED I KSS+
Sbjct: 769 HNQA-LVLLEPPPSV------------APPPIAIAQNSYGSNGVERLLAKEDGIGAKSSE 629
Query: 195 HIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQKK-ETMGIAESIRWVAEVV 253
H++NKNP+++DSSTPALYSEKD+ R KR+M++ENN +R E M I ESIRW+AE+V
Sbjct: 628 HVSNKNPMDSDSSTPALYSEKDKVRCNKRKMKSENNKRRRNNNNEDMEIVESIRWLAEMV 449
Query: 254 VRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEIIANTQLEIARIFANVNNKDKDKDKD 313
VRSEQTRM+T+KEIE+MRVEAEAKRGEME+KRTEIIANTQLEIA+IFA+VN
Sbjct: 448 VRSEQTRMDTMKEIERMRVEAEAKRGEMELKRTEIIANTQLEIAKIFASVNK-------- 293
Query: 314 VDVDSSLRIGRS 325
VDSSLRIGRS
Sbjct: 292 -GVDSSLRIGRS 260
>TC232199 similar to GB|AAP13430.1|30023794|BT006322 At3g54390 {Arabidopsis
thaliana;} , partial (27%)
Length = 580
Score = 190 bits (483), Expect = 7e-49
Identities = 100/161 (62%), Positives = 126/161 (78%), Gaps = 1/161 (0%)
Frame = +1
Query: 166 PITTAQNSHGSNGVD-KLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRR 224
P AQNS NGVD K KED + KSSD +++KNPL+TDSSTPALYS+K+E R KR+
Sbjct: 19 PRXXAQNSXXXNGVDEKRAKEDGLGAKSSDQVSSKNPLDTDSSTPALYSQKEELRXNKRK 198
Query: 225 MRTENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIK 284
+ ++N R++KE + IAES+RW+AE ++RS+Q RM+T+KEIE+MRVEAEAKRGEM++K
Sbjct: 199 KKAIDHNTGRRRKEYVEIAESLRWLAEAMIRSDQARMDTMKEIERMRVEAEAKRGEMDLK 378
Query: 285 RTEIIANTQLEIARIFANVNNKDKDKDKDVDVDSSLRIGRS 325
RTEIIANTQLEI RIFA+VN+K VDSSLRIGRS
Sbjct: 379 RTEIIANTQLEIGRIFASVNSK--------GVDSSLRIGRS 477
>TC234634 homologue to GB|AAP13430.1|30023794|BT006322 At3g54390 {Arabidopsis
thaliana;} , partial (26%)
Length = 692
Score = 180 bits (456), Expect = 9e-46
Identities = 90/121 (74%), Positives = 101/121 (83%), Gaps = 2/121 (1%)
Frame = +3
Query: 14 NQESPRKLQNNIIGSGNERLKRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWEDVAKH 73
N + NN + RLKRDEWSEGAVTTLLEAYE+KWVLRNRAKLKG DWEDVAKH
Sbjct: 315 NPNHSTTINNNTKEDHHHRLKRDEWSEGAVTTLLEAYEAKWVLRNRAKLKGHDWEDVAKH 494
Query: 74 VSSRSNSTKSPKTQTQCKNKIESMKKRYRSESASS--DVSSWPLYSRLDLLLRGTGQLST 131
VS+R+NSTKSPKTQTQCKNKIESMKKRYRSESA++ SSWPLYSRLD+LLRGT +S+
Sbjct: 495 VSARANSTKSPKTQTQCKNKIESMKKRYRSESATTADASSSWPLYSRLDVLLRGTAPISS 674
Query: 132 T 132
+
Sbjct: 675 S 677
>TC234814 similar to GB|AAP13430.1|30023794|BT006322 At3g54390 {Arabidopsis
thaliana;} , partial (32%)
Length = 507
Score = 179 bits (455), Expect = 1e-45
Identities = 90/129 (69%), Positives = 109/129 (83%), Gaps = 4/129 (3%)
Frame = +2
Query: 3 EKIENKDQIQQNQESPRKLQNNIIGSG--NERLKRDEWSEGAVTTLLEAYESKWVLRNRA 60
E+ E +++ ++++++P L + G ER+KRDEWSEGAV+TLLEAYE+KWVLRNRA
Sbjct: 11 EEEEREEEKKKHKQAPPSLFPISVRKGFSGERVKRDEWSEGAVSTLLEAYEAKWVLRNRA 190
Query: 61 KLKGQDWEDVAKHVSSRSNSTKSPKTQTQCKNKIESMKKRYRSESASSD--VSSWPLYSR 118
KLKG DWEDVA+HVSSR+N TKSPKT TQCKNK+ESMKKRYRSESA++D SSWPLYSR
Sbjct: 191 KLKGHDWEDVARHVSSRANCTKSPKTSTQCKNKVESMKKRYRSESATADHASSSWPLYSR 370
Query: 119 LDLLLRGTG 127
LDLLLRGTG
Sbjct: 371 LDLLLRGTG 397
>BI969409
Length = 400
Score = 140 bits (353), Expect = 8e-34
Identities = 75/121 (61%), Positives = 95/121 (77%)
Frame = -1
Query: 205 DSSTPALYSEKDEQRSKKRRMRTENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETL 264
DSST ALY +K+E S KR+ T + + R++KE + IAES+RW+AE ++RSEQ RM+T+
Sbjct: 400 DSSTXALYRQKEELGSXKRKKETIDXSTGRRRKEYVEIAESLRWLAEAMIRSEQARMDTM 221
Query: 265 KEIEKMRVEAEAKRGEMEIKRTEIIANTQLEIARIFANVNNKDKDKDKDVDVDSSLRIGR 324
KEIE+MRVE EAKRGEM++KRTE IANTQ+EIARIFA+VN+K VDSSLRIGR
Sbjct: 220 KEIERMRVENEAKRGEMDLKRTESIANTQVEIARIFASVNSK--------GVDSSLRIGR 65
Query: 325 S 325
S
Sbjct: 64 S 62
>TC218891 homologue to UP|GAC1_YEAST (P28006) Protein phosphatase 1
regulatory subunit GAC1, partial (3%)
Length = 1463
Score = 120 bits (300), Expect = 1e-27
Identities = 75/286 (26%), Positives = 146/286 (50%), Gaps = 13/286 (4%)
Frame = +3
Query: 27 GSGNERLKRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWEDVAKHVSSRSNSTKSPKT 86
G G + D WSEGA L++A+ +++ +R LK + W++VA+ VS R + TK+PKT
Sbjct: 336 GGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSGREDYTKAPKT 515
Query: 87 QTQCKNKIESMKKRYRSES---ASSDVSSWPLYSRLDLLLRGTGQLSTTTLNNNQAGLVL 143
QCKN+I+++KK+Y+SE A+ S WP Y RL+ L+ + ++ +N+Q V
Sbjct: 516 DIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFYDRLEQLIGPSAKIPGAGNSNSQPQKVP 695
Query: 144 LEPSSLVMSHAQEEVHQPLVPPPITTAQNSHGSNGVDKLIKEDEIETKSSDHIANKNPLE 203
L V S A + H P P+ +K +I+ + + E
Sbjct: 696 LGIPVGVRSSANQFNHPHKQPQPVP--------------LKNQKIQFRRRGPPVESDSEE 833
Query: 204 TDSSTPA---LYSEKDEQRSKKRRMRTENNNNKRQKKETMGIAESIRWVAEVVVR----- 255
D+S+PA + + +R + R M + ++++ G ++R + + +++
Sbjct: 834 RDASSPASSDSFPPESFERKRPRLMSSNTTKGSGERRKAKGWGSAVRELTQAILKFGEAY 1013
Query: 256 --SEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEIIANTQLEIARI 299
+E ++++ + E+EK R++ ++E++R + TQ+EI+++
Sbjct: 1014EQAESSKLQQVVEMEKQRMKFAK---DLELQRMQFFMKTQVEISQL 1142
>TC228286 weakly similar to GB|AAH20129.1|18044890|BC020129 Robo4 protein
{Mus musculus;} , partial (6%)
Length = 920
Score = 91.3 bits (225), Expect = 5e-19
Identities = 79/292 (27%), Positives = 127/292 (43%), Gaps = 22/292 (7%)
Frame = +2
Query: 32 RLKRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWEDVAKHVSSRSNSTKSPKTQTQCK 91
RL WS L++AY KW R LK W++VA VSSR + PKT QC+
Sbjct: 14 RLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAVSSRCPNASPPKTPVQCR 193
Query: 92 NKIESMKKRYRSE-------SASSDVSSWPLYSRLDLLLRGTG----QLSTTTLNN---- 136
+K+E ++KRYR+E S SSW + +D + +G ++ + NN
Sbjct: 194 HKMEKLRKRYRTEIQRARSLPVSRFNSSWAHFKLMDSMEKGPSPVKPDINDSDHNNTDND 373
Query: 137 ---NQAGLVLLEPSSLVMSHAQ--EEVHQPLVPPPITTAQNSHGSNGVDKLIKEDEIETK 191
+ AG L H + ++++ P S G G ++ +
Sbjct: 374 DDDDDAGQDLYHHQINHNGHTRSLNKLYRNGFP-------GSGGGAGGFRIRIPTGLSAP 532
Query: 192 SSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNN-NKRQKKETMG-IAESIRWV 249
H S ++ + QR + N N K+++++ +G + +I+ +
Sbjct: 533 QQQH---------PGSASKVFGKVGNQRFSPNLNQNPNPNLGKKRERDPVGEVVAAIKVL 685
Query: 250 AEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEIIANTQLEIARIFA 301
+ VR EQ +ME +EIE MR+ EME+KRTE+I +Q I FA
Sbjct: 686 GDGFVRMEQMKMEMAREIETMRM-------EMEMKRTEMILESQQRIVEAFA 820
>TC205836
Length = 1114
Score = 82.8 bits (203), Expect = 2e-16
Identities = 73/293 (24%), Positives = 123/293 (41%), Gaps = 26/293 (8%)
Frame = +2
Query: 53 KWVLRNRAKLKGQDWEDVAKHVSSRS-NSTKSPKTQTQCKNKIESMKKRYRSE------- 104
KW L R LK W++VA V+++ N++ + KT QC++K+E ++KRYR+E
Sbjct: 5 KWYLLGRTNLKATHWQEVADAVTAQCPNASPTAKTAVQCRHKMEKLRKRYRTEIQRLRNL 184
Query: 105 -------SASSDVSSWPLYSRLDLLLRGTGQLSTTTLNNN------QAGLVLLE-----P 146
+ ++ SSW + +D + +G + +NNN L E P
Sbjct: 185 PFPRLNNANTNSPSSWVHFKSMDSMEKGPNHKPHSDINNNLNFHDDDDDDYLYEEFKTAP 364
Query: 147 SSLVMSHAQEEVHQPLVPPPITTAQNSHGSNGVDKLIKEDEIETKSSDHIANKNPLETDS 206
S + + ++++ NS GS H A+ N +
Sbjct: 365 GSNTNTRSLNKLYKN------NNGFNSGGSGSGSGFRIRIPAGVPQQQHTASSNKIFNSH 526
Query: 207 STPALYSEKDEQRSKKRRMRTENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKE 266
P + R +R++ + E+I+ + + VR EQ +ME +E
Sbjct: 527 LPPGIVP------------RGGGVKRERERDAVAEMVEAIKVLRDGFVRMEQMKMEMARE 670
Query: 267 IEKMRVEAEAKRGEMEIKRTEIIANTQLEIARIFANVNNKDKDKDKDVDVDSS 319
IE MR+ EME+KRTE+I ++Q I FA ++ + K K SS
Sbjct: 671 IESMRM-------EMEMKRTEMILDSQQRIVEAFAMAVSQKRSKGKSTPSPSS 808
>TC208994 similar to UP|Q8W3M8 (Q8W3M8) 6b-interacting protein 1, partial
(32%)
Length = 520
Score = 77.4 bits (189), Expect = 8e-15
Identities = 38/98 (38%), Positives = 63/98 (63%), Gaps = 7/98 (7%)
Frame = +3
Query: 33 LKRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWEDVAKHVSS-RSNSTKSPKTQTQCK 91
++ D WSE A +TL++A+ +++ NR L+ +DW+DVA V++ ++ K+ +T QCK
Sbjct: 180 VREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCK 359
Query: 92 NKIESMKKRYRSESASSDV------SSWPLYSRLDLLL 123
N+I+++KK+Y+ E A SSWP Y RLD L+
Sbjct: 360 NRIDTIKKKYKIEKARVSASNGTLSSSWPFYERLDALI 473
>TC221495 similar to UP|Q8W3M8 (Q8W3M8) 6b-interacting protein 1, partial
(24%)
Length = 484
Score = 72.8 bits (177), Expect = 2e-13
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 7/94 (7%)
Frame = +1
Query: 34 KRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWEDVAKHVSSRSN--STKSPKTQTQCK 91
+ D WSE A TL+EA+ + + NR L+ + W++VA V++R STK+ +T QCK
Sbjct: 187 REDCWSEEATFTLIEAWGQRHLELNRGNLRQRHWQEVADAVNARHGHVSTKARRTDVQCK 366
Query: 92 NKIESMKKRYRSESA-----SSDVSSWPLYSRLD 120
N+I+++KK+Y+ E A ++WP + RLD
Sbjct: 367 NRIDTLKKKYKIEKARVSDSGDSATTWPFFRRLD 468
>TC224157 weakly similar to UP|Q6YTS9 (Q6YTS9) Proline-rich protein
family-like, partial (16%)
Length = 949
Score = 70.5 bits (171), Expect = 1e-12
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 2/267 (0%)
Frame = +1
Query: 38 WSEGAVTTLLEAYESKWVLRNRAKLKGQDWEDVAKHVSSRS--NSTKSPKTQTQCKNKIE 95
W+ L+ AY+ KW R L+ WE+VA V++R + K+ QC++K+E
Sbjct: 154 WTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVAARCGYDLAHPAKSALQCRHKME 333
Query: 96 SMKKRYRSESASSDVSSWPLYSRLDLLLRGTGQLSTTTLNNNQAGLVLLEPSSLVMSHAQ 155
+++R+R+E ++ L G Q +T + + L + + L +
Sbjct: 334 KLRQRHRAEKKQQHTAA--------ALRPGAWQYNTLMDDLERGPLPISALAPLDTFEEE 489
Query: 156 EEVHQPLVPPPITTAQNSHGSNGVDKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEK 215
+E + + +N + +G I++KS + I ++ P+ S+ E
Sbjct: 490 DENNDDTIDD-----RNDYDGDG-----SFINIKSKSINCILSERPVRMRSNKRGFLRE- 636
Query: 216 DEQRSKKRRMRTENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAE 275
+ E N+ + + +G++ +R AE + E +ME +KE E+ R+E E
Sbjct: 637 -------HVVVKEEEENENEDDDVLGLSTEMRAFAERFIGMESLKMEMMKETERCRLEME 795
Query: 276 AKRGEMEIKRTEIIANTQLEIARIFAN 302
KR +M ++ I ++ I R F +
Sbjct: 796 KKRIQMILETQRRIVDS---IGRAFGS 867
>TC223010 weakly similar to UP|Q08196 (Q08196) Cysteine-rich extensin-like
protein-3, partial (18%)
Length = 588
Score = 62.4 bits (150), Expect = 3e-10
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 19/125 (15%)
Frame = +1
Query: 32 RLKRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWEDVAKHVSSR-SNSTKSPKTQTQC 90
RL W+ + L++AY KW R LK W++VA V+++ N++ + KT QC
Sbjct: 4 RLPPPCWTPEETSALIDAYRDKWYSLGRTNLKATHWQEVADSVTAQCPNASPTAKTPVQC 183
Query: 91 KNKIESMKKRYRSE--------------SASSDVSSWPLYSRLDLLLRGTGQL----STT 132
++K+E ++KRYR+E ++++ SSW + +D + +G +
Sbjct: 184 RHKMEKLRKRYRTEIQRLRNLPLPRLNNASTNSPSSWLHFKSMDSMEKGPNHKPHADNNL 363
Query: 133 TLNNN 137
+NNN
Sbjct: 364 NINNN 378
>BQ296694 similar to GP|14030681|gb| AT3g10030/T22K18_15 {Arabidopsis
thaliana}, partial (7%)
Length = 421
Score = 56.6 bits (135), Expect = 1e-08
Identities = 29/65 (44%), Positives = 38/65 (57%), Gaps = 1/65 (1%)
Frame = +3
Query: 14 NQESPRKLQNNIIGSGNE-RLKRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWEDVAK 72
N+ S N + G E R R+EWS+ A+ LLEAY K+ NR L+G+DWE+VA
Sbjct: 219 NKRSKATPSNGAVSGGAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAA 398
Query: 73 HVSSR 77
VS R
Sbjct: 399 VVSER 413
>TC228285
Length = 708
Score = 52.4 bits (124), Expect = 3e-07
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = +1
Query: 232 NKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEIIAN 291
NKR++ + +I+ + + VR+EQ +ME +EIE MR+ EME+KRTE+I
Sbjct: 187 NKRERDPVGELVAAIKVLGDGFVRTEQMKMEMAREIETMRM-------EMEMKRTEMILE 345
Query: 292 TQLEIARIFANVNNKDKDKDKDV 314
+Q I FA ++ K K K V
Sbjct: 346 SQQRIVEAFAKAISEKKKKAKTV 414
>TC228287
Length = 483
Score = 49.3 bits (116), Expect = 2e-06
Identities = 31/91 (34%), Positives = 51/91 (55%), Gaps = 1/91 (1%)
Frame = +1
Query: 230 NNNKRQKKETMG-IAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEI 288
N K+++++ +G + +I+ + + VR EQ +ME +EIE MR+E ME+KRTE+
Sbjct: 34 NLGKKRERDPVGEVVAAIKVLGDGFVRMEQMKMEMAREIETMRME-------MEMKRTEM 192
Query: 289 IANTQLEIARIFANVNNKDKDKDKDVDVDSS 319
I +Q I FA ++ K K V S+
Sbjct: 193 ILESQQRIVEAFAKAVSEKNRKKKPKTVPSA 285
>TC205835
Length = 625
Score = 48.1 bits (113), Expect = 5e-06
Identities = 31/89 (34%), Positives = 50/89 (55%), Gaps = 3/89 (3%)
Frame = +1
Query: 234 RQKKETMGIAE---SIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEIIA 290
++++E +AE +I+ + + VR EQ +ME +EIE MR+E ME+KRTE+I
Sbjct: 79 KRERERDAVAEMVGAIKVLRDGFVRMEQMKMEMAREIESMRME-------MEMKRTEMIL 237
Query: 291 NTQLEIARIFANVNNKDKDKDKDVDVDSS 319
++Q I FA ++ + K K SS
Sbjct: 238 DSQQRIVEAFARAVSQKRTKGKSTPSPSS 324
>TC216648 weakly similar to UP|Q9FFQ8 (Q9FFQ8) Emb|CAB62360.1, partial (41%)
Length = 2064
Score = 38.5 bits (88), Expect = 0.004
Identities = 30/158 (18%), Positives = 72/158 (44%), Gaps = 9/158 (5%)
Frame = +1
Query: 171 QNSHGSNGVDKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENN 230
++ H + + KE + + ++ + +K+P E + TPA ++ Q KK++ ++++
Sbjct: 883 ESPHATTDILLADKEQKGKKRTRKSVPSKSPGEASTETPAKKQKQTSQSGKKQKQSSDDD 1062
Query: 231 -NNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIK----- 284
++K + + G+++ VA V +E E+ E E+ + ++ + + +K
Sbjct: 1063 EDDKAELSDAKGVSQEDEDVA--VPNNESDDEESRSEEEEEKSKSRKRTSKKAVKESSVS 1236
Query: 285 ---RTEIIANTQLEIARIFANVNNKDKDKDKDVDVDSS 319
RT + T ++ A+ K K + DS+
Sbjct: 1237 KADRTSSVKKTPVKDAKSIEKTKKKPTSKKGVAEHDSA 1350
>BM731493
Length = 427
Score = 38.1 bits (87), Expect = 0.005
Identities = 17/49 (34%), Positives = 28/49 (56%)
Frame = +1
Query: 27 GSGNERLKRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWEDVAKHVS 75
GSG+ +EW+E LLE + K++ R L+ ++W +VA+ VS
Sbjct: 277 GSGSGSGSGEEWNESETFVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVS 423
>TC231472 homologue to UP|Q9FLZ6 (Q9FLZ6) Emb|CAB62594.1, partial (12%)
Length = 1664
Score = 36.2 bits (82), Expect = 0.021
Identities = 73/349 (20%), Positives = 143/349 (40%), Gaps = 31/349 (8%)
Frame = +1
Query: 2 NEKIENKDQIQQNQ-ESPRKLQNNIIGSGNERLKRDEWSEGAVTTLLEAYESKWVLRNRA 60
+ K+E + N+ E+P K +N +G+ ++ + + S T +++ +
Sbjct: 103 SRKVEAPPKSTANKMEAPLKSTSNKVGNPSKSTSKVKASSKRTTNMVKTSSQL------S 264
Query: 61 KLKGQDWEDVAKHVSSRSNSTKSPKTQTQCKNKIESM-KKRYRSESASSDVSSWPLYSRL 119
LKG++ + KHV+S NS+ + Q N E + +RY +V+S
Sbjct: 265 SLKGKEMKLSEKHVNS-LNSSSVRRKQISSMNSSEGVGGQRYSKIKTEKEVTS------- 420
Query: 120 DLLLRGTGQLSTTTLNNNQAGLVLLEPSSLVMSHAQEEVHQPLVPPPITTAQNS------ 173
+ ++ L L+ PS + ++ H+ L Q S
Sbjct: 421 -----SNSKAASKKLMAPSKALLTPRPSLIRVASINSRKHKSLKIASHLKNQRSARKVEH 585
Query: 174 --HGSNGVDK----LIK-EDEIETKSSDHIAN----------KNPLETDSSTPALYSEKD 216
H +N V++ +IK E +T SD A+ +P + SS S++D
Sbjct: 586 EEHNNNEVEEKTLYVIKMGSENKTSLSDQNASYDDESYLPQLSSPKSSVSSISKSLSQED 765
Query: 217 EQRSKKRRMRTENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEA 276
++ S+ E ++ ET I AE + ++ + K+ + ++ +
Sbjct: 766 QEESEYTTSEFEQDSFS-GNHETECIENEETLAAEKKGKPKKGGVVYSKDNDNQMIKLKF 942
Query: 277 KRGEMEIKRTEIIANTQLE-----IARIFANVN-NKDKDKDKDVDVDSS 319
+RG++ +TEI + +L+ + R ANVN N K +++V D+S
Sbjct: 943 RRGKVVENQTEISSPRRLKFRRARVPREKANVNSNVRKSFERNVACDNS 1089
>TC203439 weakly similar to UP|Q9LX02 (Q9LX02) ESTs AU082316(E3368), partial
(27%)
Length = 1497
Score = 32.0 bits (71), Expect = 0.39
Identities = 18/93 (19%), Positives = 42/93 (44%), Gaps = 11/93 (11%)
Frame = +2
Query: 197 ANKNPLETDSSTPALYSEKDEQRSKKRRMRTE-----------NNNNKRQKKETMGIAES 245
A KN + A +E++E++ KK + + + + +K+ G+A++
Sbjct: 338 AEKNGFDRKYKWVAEIAEEEEKKKKKMKKQVKVPKDRNVTWDAEEEEENKKRLLKGVAKN 517
Query: 246 IRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKR 278
++W AE+ + E++ + +AE K+
Sbjct: 518 VKWTAEITGKGEKSGSSRKYTFQVQSGDAEKKK 616
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.306 0.123 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,153,593
Number of Sequences: 63676
Number of extensions: 134307
Number of successful extensions: 781
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of query: 325
length of database: 12,639,632
effective HSP length: 97
effective length of query: 228
effective length of database: 6,463,060
effective search space: 1473577680
effective search space used: 1473577680
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 59 (27.3 bits)
Medicago: description of AC126006.11