Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124972.9 + phase: 0 /pseudo
         (527 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW597030 similar to SP|Q9LYT3|TT12 TRANSPARENT TESTA 12 protein....   192  2e-50
TC227415 similar to UP|Q9LVD9 (Q9LVD9) Gb|AAC28507.1, partial (89%)   154  1e-37
TC208799 weakly similar to UP|Q9LP32 (Q9LP32) T9L6.1 protein, pa...   138  5e-33
TC218592 weakly similar to UP|Q9LP32 (Q9LP32) T9L6.1 protein, pa...   135  6e-32
TC232933 similar to GB|AAN73299.1|25141209|BT002302 At3g26590/MF...   135  6e-32
TC213740 weakly similar to UP|TT12_ARATH (Q9LYT3) TRANSPARENT TE...   129  3e-30
TC210208                                                              113  2e-25
TC218593                                                               69  4e-22
TC227722                                                              102  4e-22
TC231476 weakly similar to GB|AAP31960.1|30387589|BT006616 At1g1...    98  8e-21
CD406029                                                               97  2e-20
TC209152 weakly similar to PIR|B96764|B96764 protein integral me...    92  4e-19
BQ610381                                                               67  2e-11
TC222988 weakly similar to UP|Q9MAN5 (Q9MAN5) CDS, partial (29%)       65  7e-11
CD403371                                                               61  1e-09
TC224112                                                               59  5e-09
BM308541                                                               47  3e-05
AW100396                                                               46  4e-05
TC223613 weakly similar to UP|Q9FNC1 (Q9FNC1) Emb|CAB89401.1, pa...    43  3e-04
TC223286 similar to GB|AAP31960.1|30387589|BT006616 At1g15170 {A...    43  4e-04

>AW597030 similar to SP|Q9LYT3|TT12 TRANSPARENT TESTA 12 protein. [Mouse-ear
           cress] {Arabidopsis thaliana}, partial (25%)
          Length = 401

 Score =  192 bits (488), Expect(2) = 2e-50
 Identities = 99/117 (84%), Positives = 106/117 (89%)
 Frame = +1

Query: 358 VSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLT 417
           VSNELGA+HPRVAKFSVFVVNG S+LISV+F  IILI RV LS+LFTSDS VI+AVS+LT
Sbjct: 10  VSNELGASHPRVAKFSVFVVNGTSILISVVFCTIILIFRVSLSKLFTSDSDVIDAVSNLT 189

Query: 418 PLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLGVA 474
           PLLAISV  NGIQPILSGVAIG GWQALVAYVNL  YYV+GLTVGCVLGFKTSLGVA
Sbjct: 190 PLLAISVFFNGIQPILSGVAIGSGWQALVAYVNLASYYVVGLTVGCVLGFKTSLGVA 360



 Score = 25.8 bits (55), Expect(2) = 2e-50
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3

Query: 487 HLVGNDPWSFHTD 499
           +LVGNDPWS +T+
Sbjct: 363 NLVGNDPWSSYTN 401


>TC227415 similar to UP|Q9LVD9 (Q9LVD9) Gb|AAC28507.1, partial (89%)
          Length = 1748

 Score =  154 bits (388), Expect = 1e-37
 Identities = 95/199 (47%), Positives = 118/199 (58%)
 Frame = +2

Query: 274  KLTVASAFMLWAAPQSHCGTGFYFHLSISIWYVNNFSLNNVSCLFVNMLSNHDSPSKCTS 333
            KL+ ASA ML       C   +YF + + +           + L  N     DS S CT+
Sbjct: 941  KLSAASAVML-------CLETWYFQILVLL-----------AGLLPNPELALDSLSICTT 1066

Query: 334  IFSMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIIL 393
            I       W   + +G  AAASVRVSNELGA  P+ A FSV VV   S +ISVI A ++L
Sbjct: 1067 ISG-----WVFMISVGFNAAASVRVSNELGARSPKSASFSVVVVTVISFIISVIAALVVL 1231

Query: 394  ILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVC 453
             LR  +S  FT    V  AVSDL PLLA+S++LNGIQP+LSGVA+GCGWQA VAYVN+ C
Sbjct: 1232 ALRDVISYAFTGGEEVAAAVSDLCPLLALSLVLNGIQPVLSGVAVGCGWQAFVAYVNVGC 1411

Query: 454  YYVIGLTVGCVLGFKTSLG 472
            YY +G+ +G VLGF    G
Sbjct: 1412 YYGVGIPLGAVLGFYFQFG 1468


>TC208799 weakly similar to UP|Q9LP32 (Q9LP32) T9L6.1 protein, partial (46%)
          Length = 924

 Score =  138 bits (348), Expect = 5e-33
 Identities = 80/179 (44%), Positives = 105/179 (57%)
 Frame = +2

Query: 312 NNVSCLFVNMLSNHDSPSKCTSIFSMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAK 371
           N +  L    + N +      SI  +N   W+M + LG  AAASVRV+NELG    + AK
Sbjct: 5   NTILVLLTGNMKNAEVEIDALSI-CLNINGWEMMISLGFMAAASVRVANELGRGSAKAAK 181

Query: 372 FSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQP 431
           FS+ V    S+ I  +     L  R  L+ +FTS+  V  AV DL+PLL++S+LLN +QP
Sbjct: 182 FSIIVSVLTSLAIGFLLFIFFLFFRERLAYIFTSNKEVAFAVGDLSPLLSVSILLNSVQP 361

Query: 432 ILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
           +LSGVAIG GWQ++VAYVN+ CYY IG+ VG VLG    L V         I+IG L G
Sbjct: 362 VLSGVAIGAGWQSIVAYVNMGCYYAIGIPVGIVLGNVLDLQVKG-------IWIGMLFG 517


>TC218592 weakly similar to UP|Q9LP32 (Q9LP32) T9L6.1 protein, partial (37%)
          Length = 715

 Score =  135 bits (339), Expect = 6e-32
 Identities = 76/145 (52%), Positives = 97/145 (66%), Gaps = 2/145 (1%)
 Frame = +3

Query: 348 LGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS 407
           LG  AAASVRV+NELG    + AKFS+ V    S+ I  +     L LR  L+ +FTS+ 
Sbjct: 6   LGFMAAASVRVANELGKGSSKAAKFSIVVTVLTSLAIGFVLFLFFLFLRGKLAYIFTSNK 185

Query: 408 *VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGF 467
            V +AV DL+PLLAIS+LLN +QP+LSGVAIG GWQ++VAYVN+ CYY+IG+ VG VLG 
Sbjct: 186 DVADAVGDLSPLLAISILLNSVQPVLSGVAIGAGWQSIVAYVNIGCYYIIGIPVGVVLG- 362

Query: 468 KTSLGVARSTMNLIV--IYIGHLVG 490
                   + +NL V  I+IG L G
Sbjct: 363 --------NVLNLQVKGIWIGMLFG 413


>TC232933 similar to GB|AAN73299.1|25141209|BT002302 At3g26590/MFE16_11
           {Arabidopsis thaliana;} , partial (30%)
          Length = 545

 Score =  135 bits (339), Expect = 6e-32
 Identities = 64/119 (53%), Positives = 88/119 (73%)
 Frame = +1

Query: 355 SVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVS 414
           SVRVSNELGA+HPR AKFS+ V    S LI V+ + +++I R      F++DS V   V 
Sbjct: 55  SVRVSNELGASHPRTAKFSLLVAMITSTLIGVMLSMVLIIFRNHYPFFFSNDSEVRAMVV 234

Query: 415 DLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLGV 473
           +LTP+LA+ +++N +QP+LSGVA+G GWQALVAYVN+ CYY+ G+ +G VLG+K  +GV
Sbjct: 235 ELTPMLALCIVINNVQPVLSGVAVGAGWQALVAYVNIACYYLFGIPLGLVLGYKLDMGV 411


>TC213740 weakly similar to UP|TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12
           protein, partial (20%)
          Length = 733

 Score =  129 bits (324), Expect = 3e-30
 Identities = 60/136 (44%), Positives = 86/136 (63%)
 Frame = +3

Query: 338 NYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRV 397
           N   WD  + LG+  A SVRVSN LG +HPR A +S  V    S+L+ ++F  +I   + 
Sbjct: 3   NVQGWDDMLRLGINTAISVRVSNTLGMSHPRAAIYSFCVTMFQSLLLGILFMTVIFFSKD 182

Query: 398 GLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVI 457
             +++FT    +I A +DL  LL ++++LN    ++SGVAIG GWQ +V Y+NL CYY++
Sbjct: 183 EFAKIFTDSEDMILAAADLAYLLGVTIVLNSASQVMSGVAIGSGWQVMVGYINLACYYIV 362

Query: 458 GLTVGCVLGFKTSLGV 473
           GL +G  LGFK  LGV
Sbjct: 363 GLPIGIFLGFKLHLGV 410


>TC210208 
          Length = 743

 Score =  113 bits (282), Expect = 2e-25
 Identities = 62/129 (48%), Positives = 86/129 (66%), Gaps = 3/129 (2%)
 Frame = +2

Query: 346 VMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLS---RL 402
           +  GL AAAS RVSNELGA +P  AK ++ V    S+L+ + F   +L L  G +   + 
Sbjct: 230 ITYGLSAAASTRVSNELGAGNPERAKHAMSVTLKLSLLLGLCF---VLALGFGHNIWIQF 400

Query: 403 FTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVG 462
           F+  S + +  + +TPLLAIS+LL+ IQ +LSGV+ GCGWQ L AY+NL  +Y+IGL + 
Sbjct: 401 FSDSSTIKKEFASVTPLLAISILLDAIQGVLSGVSRGCGWQHLAAYINLATFYLIGLPIS 580

Query: 463 CVLGFKTSL 471
           C LGFKT+L
Sbjct: 581 CFLGFKTNL 607


>TC218593 
          Length = 991

 Score = 68.6 bits (166), Expect(2) = 4e-22
 Identities = 38/78 (48%), Positives = 50/78 (63%)
 Frame = +3

Query: 359 SNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTP 418
           +NELG    + AKFS+ V    S  I  I   + L LR  ++ LFTS+  V  AV DL+P
Sbjct: 3   ANELGRGSSKDAKFSIVVTVLTSFSIGFILFVLFLFLREKVAYLFTSNEDVATAVGDLSP 182

Query: 419 LLAISVLLNGIQPILSGV 436
           LLA+S+LLN IQP+LSG+
Sbjct: 183 LLAVSLLLNSIQPVLSGM 236



 Score = 54.7 bits (130), Expect(2) = 4e-22
 Identities = 22/32 (68%), Positives = 28/32 (86%)
 Frame = +2

Query: 435 GVAIGCGWQALVAYVNLVCYYVIGLTVGCVLG 466
           GVA+G GWQ++VAYVN+ CYY+IG+ VG VLG
Sbjct: 341 GVAVGAGWQSIVAYVNIGCYYLIGIPVGIVLG 436


>TC227722 
          Length = 676

 Score =  102 bits (254), Expect = 4e-22
 Identities = 49/104 (47%), Positives = 76/104 (72%)
 Frame = +1

Query: 370 AKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGI 429
           AK+S +V+   S+ + + F AIIL  R   + +FT+   + +AV+ L  LLA++++LN +
Sbjct: 7   AKYSFYVIVFQSLFLGIFFMAIILATRDYYAIIFTNSEVLHKAVAKLGYLLAVTMVLNSV 186

Query: 430 QPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLGV 473
           QP++SGVAIG GWQALVAY+N+ CYY+ GL +G +LG++ +LGV
Sbjct: 187 QPVVSGVAIGGGWQALVAYINIGCYYLFGLPLGFLLGYEANLGV 318


>TC231476 weakly similar to GB|AAP31960.1|30387589|BT006616 At1g15170
           {Arabidopsis thaliana;} , partial (32%)
          Length = 734

 Score = 98.2 bits (243), Expect = 8e-21
 Identities = 47/131 (35%), Positives = 79/131 (59%)
 Frame = +2

Query: 337 MNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILR 396
           +N ++    +  G+ AAAS R+SNELGA +P  A  +V      +++ + I +  + + R
Sbjct: 20  LNTISTLFSIPFGIAAAASTRISNELGAGNPHAAHVAVLAAMSFAIMETAIVSGTLFVCR 199

Query: 397 VGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYV 456
                +F+++  V++ V+ + PL+ ISV+L+ IQ +L+GVA GCGWQ +  YVNL  +Y+
Sbjct: 200 HDFGYIFSNEKEVVDYVTVMAPLICISVILDSIQGVLAGVARGCGWQHIGVYVNLGAFYL 379

Query: 457 IGLTVGCVLGF 467
            G+ V   L F
Sbjct: 380 CGIPVAATLAF 412


>CD406029 
          Length = 464

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 47/76 (61%), Positives = 61/76 (79%)
 Frame = -2

Query: 391 IILILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVN 450
           + LILR  ++ L TS+  V+ AV DL+PLLA+S+LLN IQP+LSGVA+G GWQ+ VAYVN
Sbjct: 457 LFLILREKVAYLLTSNEDVVTAVGDLSPLLALSLLLNSIQPVLSGVALGPGWQSTVAYVN 278

Query: 451 LVCYYVIGLTVGCVLG 466
           + CYY+IG+ VG VLG
Sbjct: 277 IGCYYLIGIPVGIVLG 230


>TC209152 weakly similar to PIR|B96764|B96764 protein integral membrane
           protein F25P22.12 [imported] - Arabidopsis thaliana
           {Arabidopsis thaliana;} , partial (41%)
          Length = 1166

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 53/143 (37%), Positives = 86/143 (60%)
 Frame = +1

Query: 329 SKCTSIFSMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIF 388
           S C +  +++Y      +   +GA+AS RVSNELGA +P+ AK +V VV    +  + I 
Sbjct: 292 SICLNTTTLHYF-----IPYAVGASASTRVSNELGAGNPKTAKGAVRVVVILGVAEAAIV 456

Query: 389 AAIILILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAY 448
           + + +  R  L   +++D  VI+ V+++ PLL +SV  + +   LSG+A G G+Q + AY
Sbjct: 457 STVFISCRHVLGYAYSNDKEVIDYVAEMAPLLCVSVTADSLIGALSGIARGGGFQEIGAY 636

Query: 449 VNLVCYYVIGLTVGCVLGFKTSL 471
           VNL  YY++G+ +G +LGF   L
Sbjct: 637 VNLGAYYLVGIPMGLLLGFHLQL 705


>BQ610381 
          Length = 411

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = +1

Query: 432 ILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLGVARSTMNLI 481
           +LSGVAIG GWQALVAYVN+ CYY+ G+ VG VLG+K   GV    + +I
Sbjct: 211 VLSGVAIGAGWQALVAYVNIACYYLFGIPVGLVLGYKLDWGVKGIWLGMI 360


>TC222988 weakly similar to UP|Q9MAN5 (Q9MAN5) CDS, partial (29%)
          Length = 474

 Score = 65.1 bits (157), Expect = 7e-11
 Identities = 45/137 (32%), Positives = 65/137 (46%)
 Frame = +2

Query: 283 LWAAPQSHCGTGFYFHLSISIWYVNNFSLNNVSCLFVNMLSNHDSPSKCTSIFSMNYLNW 342
           LW   +    +G    L +  WY      + +  L    + N +      SI  +N   W
Sbjct: 89  LWPVAKLSISSGAM--LCLEFWY------STILILLTGNMKNAEVQIDALSI-CININGW 241

Query: 343 DMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRL 402
           +M +  G  AAASVRV+NELG    + AKFS+ V    S +I  I   + L +R  ++ L
Sbjct: 242 EMMIAFGFMAAASVRVANELGRGSSKAAKFSIVVTVLTSFVIGFILFLLFLFVREKVAYL 421

Query: 403 FTSDS*VIEAVSDLTPL 419
            TS+  V  AV DL+PL
Sbjct: 422 STSNEDVATAVGDLSPL 472


>CD403371 
          Length = 592

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 29/94 (30%), Positives = 53/94 (55%)
 Frame = -1

Query: 374 VFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPIL 433
           VF V   +   +V+F++++   R  L   F+++  V+  V+ + P+L +S +++G   +L
Sbjct: 592 VFAVIVLAFTDAVVFSSVLFCFRHVLGFAFSNEMEVVHYVAKIVPVLCLSFMVDGFLGVL 413

Query: 434 SGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGF 467
            G+  G GWQ + A  NLV YY +G+ V  +  F
Sbjct: 412 CGIVRGSGWQKIGAITNLVAYYAVGIPVSLLFXF 311


>TC224112 
          Length = 708

 Score = 58.9 bits (141), Expect = 5e-09
 Identities = 38/120 (31%), Positives = 58/120 (47%)
 Frame = +1

Query: 350 LGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*V 409
           L  + S RV N+LGA  P  A+ S  V    S +  V+     L++R   + +FT D  +
Sbjct: 16  LSFSVSTRVGNKLGAQKPSKARLSAIVGLSCSFMSGVLALVFALMVRNTWASMFTKDKDI 195

Query: 410 IEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKT 469
           I   S + P++ +  L N  Q    GV  G     + A +NL C+Y++G+ V   L F T
Sbjct: 196 ITLTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMPVSIWLAFFT 375


>BM308541 
          Length = 112

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 21/37 (56%), Positives = 27/37 (72%)
 Frame = +2

Query: 355 SVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAI 391
           SVRVSNELG  HPR AK+SV+V+   S+ + + F AI
Sbjct: 2   SVRVSNELGLGHPRAAKYSVYVIVFQSLFLGIFFMAI 112


>AW100396 
          Length = 426

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
 Frame = -3

Query: 362 LGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPLLA 421
           LGA  P  A+FS  V    S ++ V      +++R   + +FT D  +I   S + P++ 
Sbjct: 424 LGAQKPSKAEFSSIVGLSCSFMLGVFALVFTILVRHIWANMFTQDKEIITLTSFVLPVIG 245

Query: 422 ISVLLNGIQPILS----GVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGF 467
              LL   + +L     GV  G     + A +NL C+Y++G+ V   LGF
Sbjct: 244 ---LLQPWEHVLKQPGCGVLRGTARPKVGANINLGCFYLVGMPVAVWLGF 104


>TC223613 weakly similar to UP|Q9FNC1 (Q9FNC1) Emb|CAB89401.1, partial (15%)
          Length = 460

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 35/115 (30%), Positives = 51/115 (43%)
 Frame = +2

Query: 102 C*EWQVQCKMYVDKLMEPKNMQQCASLCKEHSSYILVQQSF*HFSIGSPEIF*KS*DRRR 161
           C*EW++ C+ +VDK    KNM     + K+H  +    QS       S   F* S* + R
Sbjct: 11  C*EWRLHCQHFVDKHTAQKNMT*WECIFKDHG*FYS*VQSVFFRCSSSQAQF*LS*AKMR 190

Query: 162 A*PCKVKCSLMDLFLNSMHLHSAVPCRGFFKHRTLFIPWQLWELEFSFFMCVLTG 216
           A*    +  L   FL+ + + S    R  F  +     + +W+L    FMC   G
Sbjct: 191 A*HKWQEPFLFGQFLSYLLILSQTAARHSFNLKARMSLFHIWQLYQ*SFMCPSPG 355


>TC223286 similar to GB|AAP31960.1|30387589|BT006616 At1g15170 {Arabidopsis
           thaliana;} , partial (17%)
          Length = 414

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = +3

Query: 432 ILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGF 467
           +L+G+A GCGWQ +  YVNL  +Y+ G+ V   L F
Sbjct: 6   VLAGIARGCGWQHIGVYVNLGAFYLCGIPVAASLAF 113


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.345    0.150    0.516 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,495,464
Number of Sequences: 63676
Number of extensions: 448688
Number of successful extensions: 5385
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 3989
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 1260
Number of HSP's gapped (non-prelim): 4314
length of query: 527
length of database: 12,639,632
effective HSP length: 102
effective length of query: 425
effective length of database: 6,144,680
effective search space: 2611489000
effective search space used: 2611489000
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 61 (28.1 bits)


Medicago: description of AC124972.9