BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124972.13 - phase: 0
(935 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226553 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), pa... 875 0.0
TC226554 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), pa... 430 e-120
TC215467 similar to UP|AGO1_ARATH (O04379) Argonaute protein, pa... 334 1e-91
TC226555 similar to GB|AAC77862.2|20197419|AC005623 Argonaute (A... 330 1e-90
TC231752 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), pa... 297 1e-80
TC219116 homologue to UP|PINH_ARATH (Q9XGW1) PINHEAD protein (ZW... 284 1e-76
TC212656 similar to GB|AAC77862.2|20197419|AC005623 Argonaute (A... 262 6e-70
AW755942 similar to GP|20197419|gb Argonaute (AGO1)-like protein... 251 1e-66
BU548100 231 9e-61
BU964667 weakly similar to GP|20197419|gb| Argonaute (AGO1)-like... 204 2e-52
TC229952 homologue to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous prot... 182 8e-46
AW756252 weakly similar to PIR|T01113|T01 translation initiation... 179 7e-45
BM108030 174 2e-43
TC229953 similar to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous protei... 137 3e-32
CO979360 131 2e-30
TC211731 similar to UP|Q9SHF2 (Q9SHF2) T19E23.8, partial (13%) 129 5e-30
TC215466 homologue to UP|AGO1_ARATH (O04379) Argonaute protein, ... 120 4e-27
BM309593 116 5e-26
AW598635 similar to SP|Q9SJK3|AGOL Argonaute-like protein At2g27... 113 4e-25
TC220730 homologue to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous prot... 112 6e-25
>TC226553 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), partial (54%)
Length = 1899
Score = 875 bits (2260), Expect = 0.0
Identities = 416/501 (83%), Positives = 463/501 (92%)
Frame = +3
Query: 434 LVEKSRQKPQERMRVLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNG 493
LVEKSRQKPQERM++L+DAL+TS+YG+EPMLRNCGISI++GFT+V+GRVL APRLKFGNG
Sbjct: 3 LVEKSRQKPQERMKILSDALRTSNYGAEPMLRNCGISISTGFTEVEGRVLPAPRLKFGNG 182
Query: 494 EDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGIHVEQPFD 553
ED NPRNGRWN + K V+P KIE+WAV NFSARCDVRGLVRDLI+ G MKGI +EQPFD
Sbjct: 183 EDLNPRNGRWNVSRVKFVEPSKIERWAVANFSARCDVRGLVRDLIRIGDMKGITIEQPFD 362
Query: 554 CFEENGQFRRAPPLVRVEKMFEHVQSKLPGAPKFLLCLLSERKNSDLYGPWKKKNLAEFG 613
F+EN QFRRAPP+VRVEKMFEH+QSKLPGAP+FLLCLL +RKN D+YGPWKKKNLA+FG
Sbjct: 363 VFDENPQFRRAPPMVRVEKMFEHIQSKLPGAPQFLLCLLPDRKNCDIYGPWKKKNLADFG 542
Query: 614 IVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMDVSHG 673
I+ QC+ P RVNDQYLTNV+LKINAKLGG+NSLLGVEHSPS+P+VSKAPTLILGMDVSHG
Sbjct: 543 IINQCMCPLRVNDQYLTNVMLKINAKLGGLNSLLGVEHSPSLPVVSKAPTLILGMDVSHG 722
Query: 674 SPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEGIIRELLI 733
SPGQT+IPSIAAVVSSR WPLISKYRACVRTQ AK+EMIDNLFK VS+ EDEGIIRELL+
Sbjct: 723 SPGQTDIPSIAAVVSSRHWPLISKYRACVRTQSAKMEMIDNLFKLVSEKEDEGIIRELLL 902
Query: 734 DFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFLVIVAQKN 793
DFY +SG RKP+NIIIFRDGVSESQFNQVLNIEL +IIEACKFLDE W PKF+VIVAQKN
Sbjct: 903 DFYTTSGRRKPENIIIFRDGVSESQFNQVLNIELDRIIEACKFLDENWEPKFVVIVAQKN 1082
Query: 794 HHTKFFQPGSPDNVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSP 853
HHT+FFQPGSPDNVPPGTV+DNKICHPRNYDFY+CAHAGMIGTSRPTHYHVLLD++GFSP
Sbjct: 1083HHTRFFQPGSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDQVGFSP 1262
Query: 854 DDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDI 913
D LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+Q+GQFMKFEDKSETSSSHGG
Sbjct: 1263DQLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGLS-GA 1439
Query: 914 NASPIPQLPKLMDSVCNSMFF 934
A P+PQLP L ++V N+MFF
Sbjct: 1440GAVPVPQLPPLQENVRNTMFF 1502
>TC226554 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), partial (25%)
Length = 944
Score = 430 bits (1106), Expect = e-120
Identities = 208/231 (90%), Positives = 218/231 (94%)
Frame = +3
Query: 704 TQGAKVEMIDNLFKPVSDTEDEGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVL 763
TQ K+EMIDNLFK VSD EDEGI+RELL+DFY SSGNRKPDNIIIFRDGVSESQFNQVL
Sbjct: 3 TQSPKMEMIDNLFKKVSDKEDEGIMRELLLDFYTSSGNRKPDNIIIFRDGVSESQFNQVL 182
Query: 764 NIELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVVDNKICHPRNY 823
NIEL QIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPG+PDNVPPGTV+DNKICHPRNY
Sbjct: 183 NIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGAPDNVPPGTVIDNKICHPRNY 362
Query: 824 DFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYA 883
DFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYA
Sbjct: 363 DFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYA 542
Query: 884 HLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSVCNSMFF 934
HLAA+Q+GQFMKFEDKSETSSSHGGSG I A P+PQLP+L D V +SMFF
Sbjct: 543 HLAATQMGQFMKFEDKSETSSSHGGSG--IPAPPVPQLPRLQDKVSSSMFF 689
>TC215467 similar to UP|AGO1_ARATH (O04379) Argonaute protein, partial (51%)
Length = 1966
Score = 334 bits (856), Expect = 1e-91
Identities = 210/546 (38%), Positives = 293/546 (53%), Gaps = 41/546 (7%)
Frame = +2
Query: 430 QRSSLVEKSRQKPQERMRVLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAPRLK 489
Q ++L+ + Q+P ER R + + + Y +P + GI I+ QV+ R+L AP LK
Sbjct: 8 QITNLLRVTCQRPGERERDIMQTVHHNAYHEDPYAKEFGIKISEKLAQVEARILPAPWLK 187
Query: 490 F---GNGEDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGI 546
+ G +D P+ G+WN NKK+V + W +NFS V+D + +G
Sbjct: 188 YHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWFCINFSRN------VQDSVA----RGF 337
Query: 547 HVEQPFDCFEENGQFRRAPPLV-------RVEKM----FEHVQSKLPGAPKFLLCLLSER 595
E C+ F P + +VEK+ + ++KL G LL ++
Sbjct: 338 CYELAQMCYISGMAFTPEPVVPPVSARPDQVEKVLKTRYHDAKNKLQGKELDLLIVILPD 517
Query: 596 KNSDLYGPWKKKNLAEFGIVTQCIAPTRV---NDQYLTNVLLKINAKLGGMNSLLGVEHS 652
N LYG K+ + G+V+QC V + QYL NV LKIN K+GG N++L S
Sbjct: 518 NNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALS 697
Query: 653 PSIPIVSKAPTLILGMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMI 712
IP+VS PT+I G DV+H PG+ PSIAAVV+S+ +P I+KY V Q + E+I
Sbjct: 698 RRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDYPEITKYAGLVCAQAHRQELI 877
Query: 713 DNLFK----PVSDTEDEGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELS 768
+LFK PV T G+I+ELLI F ++G +KP II +RDGVSE QF QVL EL
Sbjct: 878 QDLFKQWQDPVRGTVTGGMIKELLISFRRATG-QKPQRIIFYRDGVSEGQFYQVLLFELD 1054
Query: 769 QIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPD--------NVPPGTVVDNKICHP 820
I +AC L+ + P +V QK HHT+ F D N+ PGTVVD+KICHP
Sbjct: 1055AIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKSSVDKSGNILPGTVVDSKICHP 1234
Query: 821 RNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPI 880
+DFY+C+HAG+ GTSRP HYHVL DE F+ D LQ L ++L Y Y R T ++S+V P
Sbjct: 1235TEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPA 1414
Query: 881 CYAHLAASQVGQFMKFEDKSETSSSH--------GGSGRDINA----SPIPQLPKLMDSV 928
YAHLAA + +M+ E S + GG GR + + LP L ++V
Sbjct: 1415YYAHLAAFRARFYMEPETSDSGSMTSGAVAGRGMGGVGRSTRVPGANAAVRPLPALKENV 1594
Query: 929 CNSMFF 934
MF+
Sbjct: 1595KRVMFY 1612
>TC226555 similar to GB|AAC77862.2|20197419|AC005623 Argonaute (AGO1)-like
protein {Arabidopsis thaliana;} , partial (17%)
Length = 899
Score = 330 bits (847), Expect = 1e-90
Identities = 159/180 (88%), Positives = 169/180 (93%)
Frame = +1
Query: 755 SESQFNQVLNIELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVVD 814
SESQFNQVLNI QIIEACKFLDEK PKFLVIVAQKNHHTKFFQPG+PDNVPPGTV+D
Sbjct: 1 SESQFNQVLNIXXDQIIEACKFLDEKXXPKFLVIVAQKNHHTKFFQPGAPDNVPPGTVID 180
Query: 815 NKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAI 874
NKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAI
Sbjct: 181 NKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAI 360
Query: 875 SVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSVCNSMFF 934
SVVAPICYAHLAA+Q+GQFMKFEDKSETSSSHGGSG + A P+PQLP+L ++V +SMFF
Sbjct: 361 SVVAPICYAHLAATQMGQFMKFEDKSETSSSHGGSG--MPAPPVPQLPRLQENVSSSMFF 534
>TC231752 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), partial (17%)
Length = 476
Score = 297 bits (761), Expect = 1e-80
Identities = 142/158 (89%), Positives = 152/158 (95%)
Frame = +2
Query: 513 PVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGIHVEQPFDCFEENGQFRRAPPLVRVEK 572
P KIE+WAVVNFSARCD RGLVRDLIKCGGMKGI ++QPFD FEENGQFRRAPP+VRVEK
Sbjct: 2 PTKIERWAVVNFSARCDTRGLVRDLIKCGGMKGIVIDQPFDVFEENGQFRRAPPVVRVEK 181
Query: 573 MFEHVQSKLPGAPKFLLCLLSERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNV 632
MFE VQSKLPGAP+FLLCLL ERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNV
Sbjct: 182 MFELVQSKLPGAPQFLLCLLPERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNV 361
Query: 633 LLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMDV 670
LLKINAKLGG+NS+LGVEHSPSIPIVS+APT+I+GMDV
Sbjct: 362 LLKINAKLGGLNSILGVEHSPSIPIVSRAPTIIIGMDV 475
>TC219116 homologue to UP|PINH_ARATH (Q9XGW1) PINHEAD protein (ZWILLE
protein), partial (40%)
Length = 1551
Score = 284 bits (727), Expect = 1e-76
Identities = 166/391 (42%), Positives = 223/391 (56%), Gaps = 25/391 (6%)
Frame = +3
Query: 569 RVEKMFEHVQ----SKLPGAPKFLLCLLSERKNSDLYGPWKKKNLAEFGIVTQCIAPT-- 622
+VEK +HV SK LL + N LYG K+ + G+++QC
Sbjct: 72 QVEKALKHVYHVAGSKTKAKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHV 251
Query: 623 -RVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMDVSHGSPGQTEIP 681
++ QYL NV LKIN K+GG N++L S IP+VS PT+I G DV+H G+ P
Sbjct: 252 FKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSP 431
Query: 682 SIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFK----PVSDTEDEGIIRELLIDFYN 737
SIAAVV+S+ WP ++KY V Q + E+I +L+K PV T G+IR+LL+ F
Sbjct: 432 SIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRK 611
Query: 738 SSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFLVIVAQKNHHTK 797
++G +KP II +RDGVSE QF QVL EL I +AC L+ + P IV QK HHT+
Sbjct: 612 ATG-QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTR 788
Query: 798 FFQPGSPD--------NVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEI 849
F D N+ PGTVVD KICHP +DFY+C HAG+ GTSRP HYHVL DE
Sbjct: 789 LFANNYRDRSSTDRSGNILPGTVVDTKICHPTEFDFYLCNHAGIQGTSRPAHYHVLWDEN 968
Query: 850 GFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGS 909
F+PD +Q L ++L Y Y R T ++SVV P YAHLAA + +M+ D + S+ G+
Sbjct: 969 NFTPDGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYME-PDMQDNGSAGDGN 1145
Query: 910 GRDINAS------PIPQLPKLMDSVCNSMFF 934
G A+ + LP L ++V MF+
Sbjct: 1146GHGAKATRAAGDYSVKPLPDLKENVKRVMFY 1238
>TC212656 similar to GB|AAC77862.2|20197419|AC005623 Argonaute (AGO1)-like
protein {Arabidopsis thaliana;} , partial (14%)
Length = 465
Score = 262 bits (669), Expect = 6e-70
Identities = 126/155 (81%), Positives = 137/155 (88%)
Frame = +1
Query: 235 LDIILRQHAAKQGCLLVRQNFFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSGLSLNIDVS 294
LDIILRQHAA QGCLLVRQ+FFHN+P NF DVGGGVLGCRG HSSFRTTQSGLSLNIDVS
Sbjct: 1 LDIILRQHAANQGCLLVRQSFFHNNPNNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVS 180
Query: 295 TTMIVHPGPVVDFLIANQNVRDPFSLDWNKAKRTLKNLRITTSPTNQEYKITGLSEMPCK 354
TTMI+ PGPVVDFLI+NQNVRDPF LDW KAKRTLKNLRI TSP+NQE+KI+GLSE+PC+
Sbjct: 181 TTMIISPGPVVDFLISNQNVRDPFQLDWAKAKRTLKNLRIKTSPSNQEFKISGLSELPCR 360
Query: 355 DQLFTLKKRGAVPGEDDTEEITVYDYFVNRRKISL 389
+Q FTLK +G GED EEITVYDYFV RKI L
Sbjct: 361 EQTFTLKGKGGGDGEDGNEEITVYDYFVKVRKIDL 465
>AW755942 similar to GP|20197419|gb Argonaute (AGO1)-like protein
{Arabidopsis thaliana}, partial (14%)
Length = 438
Score = 251 bits (641), Expect = 1e-66
Identities = 124/148 (83%), Positives = 138/148 (92%), Gaps = 1/148 (0%)
Frame = +2
Query: 290 NIDVSTTMIVHPGPVVDFLIANQNVRDPFSLDWNKAKRTLKNLRITTSPTNQEYKITGLS 349
NIDVSTTMI+ PGPVVDFLI+NQNVRDPFSLDW KAKRTLKNLRI +SP+NQE+KITGLS
Sbjct: 2 NIDVSTTMIITPGPVVDFLISNQNVRDPFSLDWAKAKRTLKNLRIKSSPSNQEFKITGLS 181
Query: 350 EMPCKDQLFTLKKRGAVPGEDDT-EEITVYDYFVNRRKISLQYSADLPCINVGKPKRPTF 408
E+PCKDQ+FTLKK+G G+DDT EE+TVYDYFVN RKI L+YS DLPCINVGKPKRPT+
Sbjct: 182 ELPCKDQMFTLKKKG---GDDDTEEEVTVYDYFVNIRKIDLRYSGDLPCINVGKPKRPTY 352
Query: 409 VPVELCSLVSLQRYTKALSTLQRSSLVE 436
+P+ELCSLVSLQRYTKALSTLQRSSLVE
Sbjct: 353 IPLELCSLVSLQRYTKALSTLQRSSLVE 436
>BU548100
Length = 650
Score = 231 bits (590), Expect = 9e-61
Identities = 117/174 (67%), Positives = 132/174 (75%)
Frame = -1
Query: 761 QVLNIELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVVDNKICHP 820
QVL IEL+QII+A + L E P+F VIVAQK HH K F P P+NVPPGTVVD I HP
Sbjct: 647 QVLTIELNQIIKAYQHLGEVNVPQFTVIVAQKKHHIKLFLPNGPENVPPGTVVDTTITHP 468
Query: 821 RNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPI 880
RNYDFYMCAHAGM+GTSRP HYHVLLDEIGFS D LQ L+HSLSYV QRST A SVVAPI
Sbjct: 467 RNYDFYMCAHAGMLGTSRPVHYHVLLDEIGFSADGLQNLIHSLSYVNQRSTIATSVVAPI 288
Query: 881 CYAHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSVCNSMFF 934
CYAH AA+Q+GQ + F+D SET SS G PIP+LP+L +V +SMFF
Sbjct: 287 CYAHHAAAQMGQLLNFDDSSETGSSPASEG----GIPIPELPRLHRNVRSSMFF 138
>BU964667 weakly similar to GP|20197419|gb| Argonaute (AGO1)-like protein
{Arabidopsis thaliana}, partial (10%)
Length = 444
Score = 204 bits (518), Expect = 2e-52
Identities = 95/129 (73%), Positives = 112/129 (86%)
Frame = +1
Query: 32 ENEECLPPPPPIVPADIEPIKIEPQIVKKKLPTKVPMARRGLGSKGAKLPLLTNHFKVNV 91
ENE+ LPPPPP+VP+D+ P+K EP+ KK ++ P+ARRGL SKG KL LLTNH++VNV
Sbjct: 67 ENEDSLPPPPPVVPSDVVPVKAEPE---KKKASRFPIARRGLASKGTKLQLLTNHYRVNV 237
Query: 92 TNTDGYFFQYSVALFYEDGRPVEGKGAGRKILDRVQETYGSELNGKDLAYDGEKTLFTIG 151
NTDG+F+QYSVALFY+DGRPVEGKG GRK+LDRV ETY SELNGKD AYDGEKTLFT+G
Sbjct: 238 ANTDGHFYQYSVALFYDDGRPVEGKGVGRKLLDRVHETYDSELNGKDFAYDGEKTLFTLG 417
Query: 152 SLAQNKLEF 160
SLA+NKLEF
Sbjct: 418 SLARNKLEF 444
>TC229952 homologue to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous protein, partial
(20%)
Length = 913
Score = 182 bits (461), Expect = 8e-46
Identities = 98/214 (45%), Positives = 130/214 (59%), Gaps = 8/214 (3%)
Frame = +2
Query: 729 RELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFLVI 788
RELL+ F ++G +KP II +RDGVSE QF QVL EL I +AC L+ + P +
Sbjct: 65 RELLLSFKKATG-QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFV 241
Query: 789 VAQKNHHTKFFQPGSPD--------NVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPT 840
V QK HHT+ F D N+ PGTVVD+KICHP +DFY+C+HAG+ GTSRP
Sbjct: 242 VVQKRHHTRLFANNHDDRNSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPA 421
Query: 841 HYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKS 900
HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P YAHLAA + +M+ D +
Sbjct: 422 HYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYME-PDVA 598
Query: 901 ETSSSHGGSGRDINASPIPQLPKLMDSVCNSMFF 934
E + G + P+ LP L + V N MF+
Sbjct: 599 EITKLR---GTRLKEGPVRPLPALKEKVKNVMFY 691
>AW756252 weakly similar to PIR|T01113|T01 translation initiation factor
eIF-2C homolog T21L14.12 - Arabidopsis thaliana, partial
(14%)
Length = 435
Score = 179 bits (453), Expect = 7e-45
Identities = 82/144 (56%), Positives = 107/144 (73%)
Frame = +1
Query: 494 EDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGIHVEQPFD 553
+D P NGRWNFN K ++Q I+ WAVVNFSA CD + R+LI+CG KGI++E+P+
Sbjct: 4 DDCIPHNGRWNFNKKTLLQASHIDYWAVVNFSASCDTSYISRELIRCGMSKGINIERPYT 183
Query: 554 CFEENGQFRRAPPLVRVEKMFEHVQSKLPGAPKFLLCLLSERKNSDLYGPWKKKNLAEFG 613
EE Q R++ P+ RVE+MF+ + SKL PK +LC+L ERK D+YGPWKKK L+E G
Sbjct: 184 LIEEEPQLRKSHPVARVERMFDLLASKLNREPKLILCVLPERKICDIYGPWKKKCLSEIG 363
Query: 614 IVTQCIAPTRVNDQYLTNVLLKIN 637
+VTQCIAP ++ +QYLTNVLLKIN
Sbjct: 364 VVTQCIAPVKITNQYLTNVLLKIN 435
>BM108030
Length = 566
Score = 174 bits (441), Expect = 2e-43
Identities = 93/136 (68%), Positives = 110/136 (80%), Gaps = 4/136 (2%)
Frame = +2
Query: 162 VVLEDVTSNRNNGNASPDGHGSPNDTDRKRLKKSHRSKTYKVEISFASKIPLQAIANALK 221
VVLEDVTSNRNNGN SPDG G N++DRKR+++ +RSK++KVEISFA+KIP+QAIA+AL+
Sbjct: 5 VVLEDVTSNRNNGNCSPDGLGD-NESDRKRMRRPYRSKSFKVEISFAAKIPMQAIASALR 181
Query: 222 GHETENYQEAIRVLDIILRQHAAKQGCLLVRQNFFHNDPKNFTDVGGGVLGCRGL----H 277
G ETEN+QEAIRVLDIILRQHAAKQGCLLVRQ+FFHN+P NF DV C L
Sbjct: 182 GQETENFQEAIRVLDIILRQHAAKQGCLLVRQSFFHNNPNNFADVR---XWCPRL*XIPL 352
Query: 278 SSFRTTQSGLSLNIDV 293
+ +SGLSLNIDV
Sbjct: 353 QALELHRSGLSLNIDV 400
Score = 47.0 bits (110), Expect = 4e-05
Identities = 30/77 (38%), Positives = 39/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 266 VGGGVLGCRGLHSSF-RTTQSGLSLNIDVSTTMIVHPGPV--VDFLIANQNVRDPFSLDW 322
+G GVLGCR HS T+ L ST + P + + ++ PF LDW
Sbjct: 315 LGXGVLGCRXFHSKL*NYTEVACLLT*MFSTYXDISPWACXWISLISQSKXXXFPFPLDW 494
Query: 323 NKAKRTLKNLRITTSPT 339
KAKRT KNL+I T P+
Sbjct: 495 AKAKRTPKNLKI*TXPS 545
>TC229953 similar to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous protein, partial
(18%)
Length = 537
Score = 137 bits (344), Expect = 3e-32
Identities = 78/174 (44%), Positives = 103/174 (58%), Gaps = 4/174 (2%)
Frame = +3
Query: 636 INAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMDVSHGSPGQTEIPSIAAVVSSRQWPLI 695
IN K+GG N++L S IP+VS PT+I G DV+H G+ PSIAAVV+S+ WP +
Sbjct: 3 INVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDPCPSIAAVVASQDWPEV 182
Query: 696 SKYRACVRTQGAKVEMIDNLFKPVSDTED----EGIIRELLIDFYNSSGNRKPDNIIIFR 751
+KY V Q + E+I +LFK D G+IRELL+ F ++G +KP II +R
Sbjct: 183 TKYAGLVCAQPHREELIQDLFKCWKDPHHGIVYGGMIRELLLSFKKATG-QKPLRIIFYR 359
Query: 752 DGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPD 805
DGVSE QF QVL EL I +AC L+ + P +V QK HHT+ F D
Sbjct: 360 DGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSNNHDD 521
>CO979360
Length = 753
Score = 131 bits (329), Expect = 2e-30
Identities = 79/191 (41%), Positives = 108/191 (56%), Gaps = 14/191 (7%)
Frame = -1
Query: 758 QFNQVLNIELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPD------------ 805
QF +VL EL I AC + P V QK HHT+ F P D
Sbjct: 753 QFYKVLEEELQSIRCACSRFPG-YKPTITFAVVQKRHHTRLF-PFETDQSSTQKNNFLYE 580
Query: 806 NVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSY 865
N+PPGTVVD+ I HP+ +DFY+C+H G+ GTSRPTHYHVL DE F+ D+LQ+LV++L Y
Sbjct: 579 NIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCY 400
Query: 866 VYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDINASP--IPQLPK 923
+ R T IS+V P YAHLAA + ++ ++SE+ + A+P LPK
Sbjct: 399 TFVRCTKPISLVPPAYYAHLAAYRGRLYL---ERSESLGLFRSTSTLSRAAPPKTAPLPK 229
Query: 924 LMDSVCNSMFF 934
L +++ MF+
Sbjct: 228 LSENIKKLMFY 196
>TC211731 similar to UP|Q9SHF2 (Q9SHF2) T19E23.8, partial (13%)
Length = 594
Score = 129 bits (325), Expect = 5e-30
Identities = 83/204 (40%), Positives = 109/204 (52%), Gaps = 4/204 (1%)
Frame = +3
Query: 613 GIVTQCIAPTRVN---DQYLTNVLLKINAKLGGMNSLLGVEHSPSIP-IVSKAPTLILGM 668
GIVTQC N DQYLTN+ LKINAK+GG N VE +P + + +G
Sbjct: 30 GIVTQCCLSGIANEGKDQYLTNLALKINAKIGGSN----VELINRLPHFEGEGHVMFIGA 197
Query: 669 DVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEGII 728
DV+H + PSIAAVV++ WP ++Y A V QG +VE I N G I
Sbjct: 198 DVNHPASRDINSPSIAAVVATVNWPAANRYAARVCAQGHRVEKILNF----------GRI 347
Query: 729 RELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFLVI 788
L+ +Y+ +P+ I++FRDGVSESQF+ VL EL + F D + P +I
Sbjct: 348 CYELVSYYDRLNKVRPEKIVVFRDGVSESQFHMVLTEELQDLKSV--FSDANYFPTITII 521
Query: 789 VAQKNHHTKFFQPGSPDNVPPGTV 812
VAQK H T+FF G D + G V
Sbjct: 522 VAQKRHQTRFFPVGPKDGIQNGNV 593
>TC215466 homologue to UP|AGO1_ARATH (O04379) Argonaute protein, partial
(14%)
Length = 775
Score = 120 bits (300), Expect = 4e-27
Identities = 64/146 (43%), Positives = 85/146 (57%), Gaps = 17/146 (11%)
Frame = +1
Query: 806 NVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSY 865
N+ PGTVVD+KICHP +DFY+C+HAG+ GTSRP HYHVL DE F+ D LQ L ++L Y
Sbjct: 19 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCY 198
Query: 866 VYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSH-------------GGSGRD 912
Y R T ++S+V P YAHLAA + +M+ E S + GG GR
Sbjct: 199 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVAGRGMGGGGGGGVGRS 378
Query: 913 INA----SPIPQLPKLMDSVCNSMFF 934
A + + LP L ++V MF+
Sbjct: 379 TRAPGANAAVRPLPALKENVKRVMFY 456
>BM309593
Length = 188
Score = 116 bits (290), Expect = 5e-26
Identities = 56/62 (90%), Positives = 62/62 (99%)
Frame = +2
Query: 408 FVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDALKTSDYGSEPMLRNC 467
++P+ELCSLVSLQRYTKALSTLQR+SLVEKSRQKPQERMRVLTDALK+S+YGSEPMLRNC
Sbjct: 2 YIPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMRVLTDALKSSNYGSEPMLRNC 181
Query: 468 GI 469
GI
Sbjct: 182 GI 187
>AW598635 similar to SP|Q9SJK3|AGOL Argonaute-like protein At2g27880.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (10%)
Length = 320
Score = 113 bits (282), Expect = 4e-25
Identities = 57/106 (53%), Positives = 70/106 (65%), Gaps = 8/106 (7%)
Frame = +3
Query: 754 VSESQFNQVLNIELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFF--QPGSPD------ 805
VSE QF+QVL E+ I AC L E + P+ +V QK HHT+ F + GS D
Sbjct: 3 VSEGQFSQVLLYEMDAIRRACASLQEDYMPRVTFVVVQKRHHTRLFPAEHGSRDQTDKSG 182
Query: 806 NVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGF 851
N+ PGTVVD +ICHPR +DFY+ +HAG+ GTSRPTHYHVL DE F
Sbjct: 183 NILPGTVVDTQICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENNF 320
>TC220730 homologue to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous protein, partial
(10%)
Length = 556
Score = 112 bits (281), Expect = 6e-25
Identities = 56/119 (47%), Positives = 76/119 (63%)
Frame = +3
Query: 816 KICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAIS 875
KICHP +DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++S
Sbjct: 3 KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVS 182
Query: 876 VVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSVCNSMFF 934
VV P YAHLAA + +M+ + E + S G +D + P LP L + V N MF+
Sbjct: 183 VVPPAYYAHLAAYRARFYME-PNVHEIAKSRGARSKDESVRP---LPALKEKVKNVMFY 347
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.137 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,997,851
Number of Sequences: 63676
Number of extensions: 615725
Number of successful extensions: 3523
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 3374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3469
length of query: 935
length of database: 12,639,632
effective HSP length: 106
effective length of query: 829
effective length of database: 5,889,976
effective search space: 4882790104
effective search space used: 4882790104
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC124972.13