TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124967.1 - phase: 0 /pseudo
         (462 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC232208 similar to UP|Q9S7F0 (Q9S7F0) F1K23.20 (F3M18.1), parti...    29  5.1
TC207522                                                               28  8.6

>TC232208 similar to UP|Q9S7F0 (Q9S7F0) F1K23.20 (F3M18.1), partial (15%)
          Length = 863

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 8/15 (53%), Positives = 12/15 (79%)
 Frame = +2

Query: 135 VCCKICGACKVLSPL 149
           VCC +CG C+V +P+
Sbjct: 476 VCCSLCGTCRVTAPI 520


>TC207522 
          Length = 1267

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 307 SWWKSFCFDWYT 318
           SWWKS CF W T
Sbjct: 267 SWWKSICFMWCT 232


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.376    0.169    0.742 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,305,509
Number of Sequences: 63676
Number of extensions: 409877
Number of successful extensions: 8091
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3226
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 4362
Number of HSP's gapped (non-prelim): 3968
length of query: 462
length of database: 12,639,632
effective HSP length: 101
effective length of query: 361
effective length of database: 6,208,356
effective search space: 2241216516
effective search space used: 2241216516
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 13 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 35 (21.5 bits)
S2: 61 (28.1 bits)