TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124953.2 + phase: 0 
         (53 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC209730                                                               26  4.9
TC233008 similar to UP|Q9ASW3 (Q9ASW3) AT3g49260/F2K15_120 (Guar...    25  6.5
TC212476                                                               25  8.4

>TC209730 
          Length = 772

 Score = 25.8 bits (55), Expect = 4.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 11  ILFFWADYRVTSRKGLKILI 30
           + F W   R TSR GL++L+
Sbjct: 623 VCFVWTSERTTSRSGLRLLL 682


>TC233008 similar to UP|Q9ASW3 (Q9ASW3) AT3g49260/F2K15_120 (Guard cell
           associated protein) (SF16-like protein), partial (29%)
          Length = 700

 Score = 25.4 bits (54), Expect = 6.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 5   CCQQALILFFWADYRVTSRKGLKILITDEN 34
           CC   ++ FF++ +  +    LK   TDEN
Sbjct: 224 CCNFCVLSFFFSGWGESLEDDLKTFFTDEN 135


>TC212476 
          Length = 1014

 Score = 25.0 bits (53), Expect = 8.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 4  VCCQQALILFFWADYRVTSRKGLKIL 29
          +CC Q L+ FF  ++    RKG  +L
Sbjct: 42 LCCIQILMCFFMLEFPFKLRKGSHVL 119


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.327    0.140    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,457,397
Number of Sequences: 63676
Number of extensions: 20343
Number of successful extensions: 106
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of query: 53
length of database: 12,639,632
effective HSP length: 29
effective length of query: 24
effective length of database: 10,793,028
effective search space: 259032672
effective search space used: 259032672
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (24.6 bits)