BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124952.12 + phase: 2 /pseudo
(313 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC220823 UP|O48918 (O48918) CYP71A10, complete 81 5e-28
TC219574 weakly similar to UP|O48918 (O48918) CYP71A10, partial ... 100 1e-21
NP004893 cytochrome P-450 (CYP93A2) 69 2e-12
TC230557 weakly similar to UP|C7D9_SOYBN (O81971) Cytochrome P45... 66 1e-11
TC208991 weakly similar to UP|Q9AVM0 (Q9AVM0) Cytochrome P450, p... 66 2e-11
TC227063 UP|C931_SOYBN (Q42798) Cytochrome P450 93A1 , complete 64 7e-11
TC232965 weakly similar to UP|Q9AVM0 (Q9AVM0) Cytochrome P450, p... 64 9e-11
TC222902 similar to UP|C932_SOYBN (Q42799) Cytochrome P450 93A2 ... 63 2e-10
TC224852 weakly similar to UP|O48924 (O48924) CYP83D1p (Fragment... 62 3e-10
TC207575 weakly similar to UP|Q8W228 (Q8W228) Cytochrome P450, p... 62 3e-10
TC212296 UP|C933_SOYBN (O81973) Cytochrome P450 93A3 (P450 CP5)... 62 3e-10
TC228697 weakly similar to UP|C7D8_SOYBN (O81974) Cytochrome P45... 62 4e-10
TC216289 UP|Q8W3Y5 (Q8W3Y5) Flavonoid 3'-hydroxylase, complete 61 7e-10
TC217900 UP|O48924 (O48924) CYP83D1p (Fragment), complete 60 1e-09
TC228698 similar to UP|C7D8_SOYBN (O81974) Cytochrome P450 71D8 ... 60 1e-09
TC206973 UP|C7D8_SOYBN (O81974) Cytochrome P450 71D8 (P450 CP7)... 60 2e-09
TC229944 weakly similar to UP|Q6QNI1 (Q6QNI1) Cytochrome P450, p... 59 3e-09
BM892323 weakly similar to PIR|T05940|T059 cytochrome P450 83D1p... 57 8e-09
NP004888 putative cytochrome P450 57 1e-08
TC231530 homologue to UP|C7DA_SOYBN (O48923) Cytochrome P450 71D... 56 2e-08
>TC220823 UP|O48918 (O48918) CYP71A10, complete
Length = 1846
Score = 81.3 bits (199), Expect(2) = 5e-28
Identities = 44/103 (42%), Positives = 65/103 (62%)
Frame = +1
Query: 210 LKKIKDSSEEMDDFLDRVIVEHKMSRRDPKKKDFLDILLQLQDDGLTEFELTQNDLKALL 269
+ ++K + +D FLD VI EH+ S + K DFL ILLQLQ+ G +F+L +++LKA+L
Sbjct: 745 IPEMKTTFLAVDAFLDEVIAEHESSNK--KNDDFLGILLQLQECGRLDFQLDRDNLKAIL 918
Query: 270 MNMFLGGSDTTSTTLEWAMAACKKSSHNEESTGGGKENCRGIN 312
++M +GGSDTTSTTLEW A ++ + + GIN
Sbjct: 919 VDMIIGGSDTTSTTLEWTFAEFLRNPNTMKKAQEEVRRVVGIN 1047
Score = 60.8 bits (146), Expect(2) = 5e-28
Identities = 59/168 (35%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Frame = +2
Query: 9 HPHLDCQ*LATTFN*EHFLIALFNPSHKSMVL**CCILVSFLCWWFPQYIWPRKSCKHMA 68
HPH * A +* H A F SH +M L *CC V F W Q WP K K M
Sbjct: 134 HPHQRYP*SAIFTS*AHCHTAPFMHSHTNMALS*CCNWVKFQP*WSHQLTWPEK*SKRMM 313
Query: 69 *FLRTDQARH*QKPYSMVVRTLRFHLMAIHGDRKRNCV*MNC*VRKGCNQYSLLEKSNLL 128
F T K M + A GD++ V ++ *V + C + L+K L
Sbjct: 314 LFSPTADNLQLLKSLVMDAKMWLSCTTAKSGDKR*RHVRLSL*V*RRCGCFIPLDKKLLQ 493
Query: 129 HWLIRYVKL*V*VVVVA--V*TLVRC*LKQQTR*SVGVYLEGNMTMKV 174
WL KL*V VVV V* +RC* + +T + V+L+G++ M V
Sbjct: 494 SWL----KL*VKRVVVKDHV*I*LRC*WQHRTTLCLDVFLDGSVMMHV 625
>TC219574 weakly similar to UP|O48918 (O48918) CYP71A10, partial (33%)
Length = 1320
Score = 100 bits (248), Expect = 1e-21
Identities = 92/269 (34%), Positives = 124/269 (45%), Gaps = 10/269 (3%)
Frame = +1
Query: 2 HPFHVYFHPHLDCQ*LATTFN*EHFLIALFNPSHKSMVL**CCILVSFLCWWFPQYIWPR 61
+P + P Q LA N* + L PSHKSMVL* CC WWF
Sbjct: 259 NPVSICLPPQESYQSLAIFIN*ANCHTILLEPSHKSMVL*CCCSWGRLEPWWFHLQTRSG 438
Query: 62 KSCKHMA*FLRTDQARH*QKPYSMVVRTLRFHLMAIHGDRKRNCV*MNC*VRKGCNQYSL 121
KS K * +TD QKP M V TL H M G+ K V ++ * KGC+
Sbjct: 439 KS*KLTT*LSQTDPKPQQQKPCCMDVMTLVLHPMEKAGNTKEKYVSLSF*APKGCSHLVS 618
Query: 122 LEKSNLLHWLIRYVKL*V*VVVVAV*TLVRC*LKQQTR*SVGVYLEGNMTMKVTDWES-- 179
EK L + L RYVK *V+ +* V C LKQQT SV V LE N K+ S
Sbjct: 619 SEKKRLQN*LTRYVKQ-A*VMHPPL*I*VSCLLKQQTTSSVNVLLERNTVQKIVTAGSKX 795
Query: 180 LAGG*RLKF*ILVWEICFLC*VGLMFSLAKLKKIKDSSEEMDDFLDRVIVEHKMSRR--- 236
LA ++ ++ F + F ++++ K + +D D+VI EHK +R
Sbjct: 796 LAKRAMIQLGVVTVGDRFPFLGWVDFLTGQIQEFKATFGALDALFDQVIAEHKKMQRVSD 975
Query: 237 -DPKKKDFLDILL----QLQDDGLTEFEL 260
+KDF+DIL+ +L DG+ + +
Sbjct: 976 LCSTEKDFVDILIMPDSELTKDGIKSYSI 1062
>NP004893 cytochrome P-450 (CYP93A2)
Length = 1509
Score = 69.3 bits (168), Expect = 2e-12
Identities = 33/86 (38%), Positives = 57/86 (65%), Gaps = 7/86 (8%)
Frame = +1
Query: 211 KKIKDSSEEMDDFLDRVIVEHKMSRRDPKK-------KDFLDILLQLQDDGLTEFELTQN 263
K+I+ + D LDR+I + + RR+ K+ KD LD+LL + +D +E +LT+
Sbjct: 682 KRIRKTRIRFDAVLDRIIKQREEERRNNKEIGGTRQFKDILDVLLDIGEDDSSEIKLTKE 861
Query: 264 DLKALLMNMFLGGSDTTSTTLEWAMA 289
++KA +M++F+ G+DT++ T+EWAMA
Sbjct: 862 NIKAFIMDIFVAGTDTSAATMEWAMA 939
>TC230557 weakly similar to UP|C7D9_SOYBN (O81971) Cytochrome P450 71D9
(P450 CP3) , partial (14%)
Length = 511
Score = 66.2 bits (160), Expect(2) = 1e-11
Identities = 29/89 (32%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Frame = +3
Query: 212 KIKDSSEEMDDFLDRVIVEHKMSRRDPK------KKDFLDILLQLQDDGLTEFELTQNDL 265
K++ ++ D ++ +I EHK + K ++D +D+L+Q +D +F LT+N +
Sbjct: 132 KLERLHQQADQIMENIINEHKEANSKAKDDQSEAEEDLVDVLIQYEDGSKKDFSLTRNKI 311
Query: 266 KALLMNMFLGGSDTTSTTLEWAMAACKKS 294
KA+++++F G +TT+TT++WAMA K+
Sbjct: 312 KAIILDIFAAGGETTATTIDWAMAEMVKN 398
Score = 20.4 bits (41), Expect(2) = 1e-11
Identities = 9/19 (47%), Positives = 12/19 (62%)
Frame = +1
Query: 190 ILVWEICFLC*VGLMFSLA 208
+L +ICFL +G SLA
Sbjct: 67 VLALKICFLLLLGFNMSLA 123
>TC208991 weakly similar to UP|Q9AVM0 (Q9AVM0) Cytochrome P450, partial (31%)
Length = 736
Score = 65.9 bits (159), Expect = 2e-11
Identities = 37/103 (35%), Positives = 60/103 (57%), Gaps = 7/103 (6%)
Frame = +1
Query: 212 KIKDSSEEMDDFLDRVIVEH-KMSRRDPKKKDFLDILLQLQDDGLTEFELTQNDLKALLM 270
+++ + +E+D+F VI EH +R+ K +D D+LLQL+ L +LT + +KA+LM
Sbjct: 10 RLERNFKELDEFYQEVIDEHMNPNRKTTKNEDITDVLLQLKKQRLYSIDLTNDHIKAVLM 189
Query: 271 NMFLGGSDTTSTTLEWAMAACKKSS------HNEESTGGGKEN 307
+M + +DTT+ T WAM A K+ E T GGK++
Sbjct: 190 DMLVAATDTTAATTVWAMTALLKNPRVMKKVQEEIRTLGGKKD 318
>TC227063 UP|C931_SOYBN (Q42798) Cytochrome P450 93A1 , complete
Length = 1769
Score = 64.3 bits (155), Expect = 7e-11
Identities = 30/86 (34%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Frame = +1
Query: 211 KKIKDSSEEMDDFLDRVIVEHKMSRRDPKK-------KDFLDILLQLQDDGLTEFELTQN 263
+KIK++ + D +D +I + + RR K+ KD LD+LL + +D E +L +
Sbjct: 754 RKIKETRDRFDVVVDGIIKQRQEERRKNKETGTAKQFKDMLDVLLDMHEDENAEIKLDKK 933
Query: 264 DLKALLMNMFLGGSDTTSTTLEWAMA 289
++KA +M++F+ G+DT++ ++EWAMA
Sbjct: 934 NIKAFIMDIFVAGTDTSAVSIEWAMA 1011
>TC232965 weakly similar to UP|Q9AVM0 (Q9AVM0) Cytochrome P450, partial (30%)
Length = 647
Score = 63.9 bits (154), Expect = 9e-11
Identities = 35/103 (33%), Positives = 59/103 (56%), Gaps = 8/103 (7%)
Frame = +2
Query: 212 KIKDSSEEMDDFLDRVIVEHK-MSRRDPKKKDFLDILLQLQDDGLTEFELTQNDLKALLM 270
+++ + +E+D F VI EH +R+ +++D +D+LLQL++D +LT + +K +LM
Sbjct: 14 RLERNFKELDKFYQEVIDEHMDPNRQHAEEQDMVDVLLQLKNDRSLSIDLTYDHIKGVLM 193
Query: 271 NMFLGGSDTTSTTLEWAMAA-------CKKSSHNEESTGGGKE 306
N+ G+DTT+ T WAM A KK + GG K+
Sbjct: 194 NILAAGTDTTAATSVWAMTALVKNPRVMKKVQEEVRNVGGTKD 322
>TC222902 similar to UP|C932_SOYBN (Q42799) Cytochrome P450 93A2 , partial
(29%)
Length = 617
Score = 62.8 bits (151), Expect = 2e-10
Identities = 30/93 (32%), Positives = 56/93 (59%), Gaps = 7/93 (7%)
Frame = +3
Query: 211 KKIKDSSEEMDDFLDRVIVEHKMSRRDPKKK-------DFLDILLQLQDDGLTEFELTQN 263
K++ E D ++RVI EH+ R K++ D LDILL++ D E +L++
Sbjct: 6 KRLVGILERFDGMMERVIREHEEERERRKERGEGEEIRDLLDILLEIHQDESREIKLSRE 185
Query: 264 DLKALLMNMFLGGSDTTSTTLEWAMAACKKSSH 296
++KA ++++++ G+DT++ T+EWA+A + H
Sbjct: 186 NVKAFILDIYMAGTDTSAITMEWALAELINNHH 284
>TC224852 weakly similar to UP|O48924 (O48924) CYP83D1p (Fragment), partial
(45%)
Length = 1891
Score = 62.4 bits (150), Expect = 3e-10
Identities = 29/84 (34%), Positives = 54/84 (63%), Gaps = 1/84 (1%)
Frame = +1
Query: 212 KIKDSSEEMDDFLDRVIVEHKMSRRD-PKKKDFLDILLQLQDDGLTEFELTQNDLKALLM 270
+++ + +EMD F I EH S++ P+++D +D+LLQL+++ +LT +++KA+L+
Sbjct: 808 RLERNFKEMDKFYQEAIDEHMNSKKKTPEEEDLVDVLLQLKENNTFPIDLTNDNIKAVLL 987
Query: 271 NMFLGGSDTTSTTLEWAMAACKKS 294
N+ +G + TT T WAM K+
Sbjct: 988 NLLVGATGTTEVTTIWAMTELIKN 1059
>TC207575 weakly similar to UP|Q8W228 (Q8W228) Cytochrome P450, partial (19%)
Length = 643
Score = 62.0 bits (149), Expect = 3e-10
Identities = 34/115 (29%), Positives = 67/115 (57%), Gaps = 12/115 (10%)
Frame = +2
Query: 211 KKIKDSSEEMDDFLDRVIVEHKMSRRDPKK--------KDFLDILLQLQDDGLT----EF 258
+++K +S+E+D FL+++I +H+ ++ D K KDF+DILL L + + +
Sbjct: 170 RRLKKASKEIDQFLEQIIQDHEHNQYDNYKVQKAPHNNKDFVDILLSLMNQPIDLQGHQN 349
Query: 259 ELTQNDLKALLMNMFLGGSDTTSTTLEWAMAACKKSSHNEESTGGGKENCRGINK 313
+ + ++KA++++M + DT+STT+EWAM+ + + EN G+N+
Sbjct: 350 VIDRTNIKAIILDMIMAAFDTSSTTVEWAMSELLRHQSVMKRLQDELENVVGMNR 514
>TC212296 UP|C933_SOYBN (O81973) Cytochrome P450 93A3 (P450 CP5) , complete
Length = 1646
Score = 62.0 bits (149), Expect = 3e-10
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
Frame = +1
Query: 209 KLKKIKDSSEEMDDFLDRVIVEHKMSRRDPKK-------KDFLDILLQLQDDGLTEFELT 261
+L+KI+D D LDR+I + + RR+ + KD LD+L + +D +E +L
Sbjct: 721 RLEKIRDC---FDTVLDRIIKQREEERRNKNETVGKREFKDMLDVLFDISEDESSEIKLN 891
Query: 262 QNDLKALLMNMFLGGSDTTSTTLEWAMA 289
+ ++KA ++++ + G+DT++ T+EWAMA
Sbjct: 892 KENIKAFILDILIAGTDTSAVTMEWAMA 975
>TC228697 weakly similar to UP|C7D8_SOYBN (O81974) Cytochrome P450 71D8
(P450 CP7) , partial (20%)
Length = 619
Score = 61.6 bits (148), Expect = 4e-10
Identities = 27/86 (31%), Positives = 56/86 (64%), Gaps = 8/86 (9%)
Frame = +2
Query: 212 KIKDSSEEMDDFLDRVIVEHKMSRR--------DPKKKDFLDILLQLQDDGLTEFELTQN 263
K++ E++D D ++ EH+ R+ D +++D +D+LL++Q E +++
Sbjct: 218 KLEKMHEQVDKIADNILREHQEKRQRALREGKVDLEEEDLVDVLLRIQQSDNLEIKISTT 397
Query: 264 DLKALLMNMFLGGSDTTSTTLEWAMA 289
++KA+++++F G+DT+++TLEWAMA
Sbjct: 398 NIKAVILDVFTAGTDTSASTLEWAMA 475
>TC216289 UP|Q8W3Y5 (Q8W3Y5) Flavonoid 3'-hydroxylase, complete
Length = 1883
Score = 60.8 bits (146), Expect = 7e-10
Identities = 38/89 (42%), Positives = 54/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 208 AKLKKIKDSSEEMDDFLDRVIVEHK-MSRRDPKKKDFLDILLQLQDDGLTEFE-LTQNDL 265
AK+KK+ + D FL +I EH S ++ K+FL ILL L+D LT ++
Sbjct: 773 AKMKKLH---KRFDAFLTSIIEEHNNSSSKNENHKNFLSILLSLKDVRDDHGNHLTDTEI 943
Query: 266 KALLMNMFLGGSDTTSTTLEWAMAACKKS 294
KALL+NMF G+DT+S+T EWA+A K+
Sbjct: 944 KALLLNMFTAGTDTSSSTTEWAIAELIKN 1030
>TC217900 UP|O48924 (O48924) CYP83D1p (Fragment), complete
Length = 1672
Score = 60.5 bits (145), Expect = 1e-09
Identities = 32/79 (40%), Positives = 46/79 (57%)
Frame = +2
Query: 232 KMSRRDPKKKDFLDILLQLQDDGLTEFELTQNDLKALLMNMFLGGSDTTSTTLEWAMAAC 291
K + + KD +DILLQL DD F+LT + +KA+LMN+F+ G+D +S T+ WAM A
Sbjct: 818 KKDNDNKEVKDIIDILLQLLDDRSFTFDLTLDHIKAVLMNIFIAGTDPSSATIVWAMNAL 997
Query: 292 KKSSHNEESTGGGKENCRG 310
K+ + G N G
Sbjct: 998 LKNPNVMSKVQGEVRNLFG 1054
>TC228698 similar to UP|C7D8_SOYBN (O81974) Cytochrome P450 71D8 (P450 CP7)
, partial (46%)
Length = 991
Score = 60.1 bits (144), Expect = 1e-09
Identities = 27/90 (30%), Positives = 56/90 (62%), Gaps = 8/90 (8%)
Frame = +3
Query: 218 EEMDDFLDRVIVEHKMSRR--------DPKKKDFLDILLQLQDDGLTEFELTQNDLKALL 269
E++D D ++ EH+ R+ D +++D +D+LL++Q E +++ ++KA++
Sbjct: 15 EQVDKIADNILREHQEKRQRALREGKVDLEEEDLVDVLLRIQQSDNLEIKISTTNIKAVI 194
Query: 270 MNMFLGGSDTTSTTLEWAMAACKKSSHNEE 299
+++F G+DT+++TLEWAMA ++ E
Sbjct: 195 LDVFTAGTDTSASTLEWAMAEMMRNPRVRE 284
>TC206973 UP|C7D8_SOYBN (O81974) Cytochrome P450 71D8 (P450 CP7) , complete
Length = 1800
Score = 59.7 bits (143), Expect = 2e-09
Identities = 28/96 (29%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Frame = +2
Query: 212 KIKDSSEEMDDFLDRVIVEHKMSRR--------DPKKKDFLDILLQLQDDGLTEFELTQN 263
K++ + D L+ ++ +H R + +++D +D+LL+L++ G E +T
Sbjct: 776 KVEHVHQRADKILEDILRKHMEKRTRVKEGNGSEAEQEDLVDVLLRLKESGSLEVPMTME 955
Query: 264 DLKALLMNMFLGGSDTTSTTLEWAMAACKKSSHNEE 299
++KA++ N+F G+DT+++TLEWAM+ K+ +E
Sbjct: 956 NIKAVIWNIFAAGTDTSASTLEWAMSEMMKNPKVKE 1063
>TC229944 weakly similar to UP|Q6QNI1 (Q6QNI1) Cytochrome P450, partial (32%)
Length = 1143
Score = 58.9 bits (141), Expect = 3e-09
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = +2
Query: 211 KKIKDSSEEMDDFLDRVIVEHKMSRR---DPKK-KDFLDILLQLQDDGLTEFELTQND-- 264
KK+K +++E+D F+ + EHK R +PK +D +D+LL L ++G EF+ D
Sbjct: 50 KKMKKTAKELDGFVQVWLEEHKSKRNSEAEPKSNQDLMDVLLSLVEEG-QEFDGQDADTT 226
Query: 265 LKALLMNMFLGGSDTTSTTLEWAMA 289
+KA + + L GSDTT+TTL WA++
Sbjct: 227 IKATCLGLILAGSDTTTTTLSWALS 301
>BM892323 weakly similar to PIR|T05940|T059 cytochrome P450 83D1p - soybean
(fragment), partial (8%)
Length = 396
Score = 57.4 bits (137), Expect = 8e-09
Identities = 26/87 (29%), Positives = 52/87 (58%), Gaps = 4/87 (4%)
Frame = +1
Query: 212 KIKDSSEEMDDFLDRVIVEH----KMSRRDPKKKDFLDILLQLQDDGLTEFELTQNDLKA 267
+++ + E +D FL V+ EH + + ++KD +D+LL+L+ G +LT + +KA
Sbjct: 118 RLEKTFEALDGFLQEVLDEHLDPNMVKVKQNEEKDLVDLLLELKKQGRLSIDLTDDQIKA 297
Query: 268 LLMNMFLGGSDTTSTTLEWAMAACKKS 294
+++++ + G+DTT+ T W M K+
Sbjct: 298 IILDILIAGTDTTAATSVWVMTGLIKN 378
>NP004888 putative cytochrome P450
Length = 1500
Score = 56.6 bits (135), Expect = 1e-08
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Frame = +1
Query: 219 EMDDFLDRVIVEH----KMSRRDPKKKDFLDILLQLQDDGLTEFELTQNDLKALLMNMFL 274
EMD+F D+VI EH R + +D +D+LL++Q D +T + +K +L+++F+
Sbjct: 721 EMDNFYDQVIKEHIADNSSERSGAEHEDVVDVLLRVQKDPNQAIAITDDQIKGVLVDIFV 900
Query: 275 GGSDTTSTTLEWAMA-------ACKKSSHNEESTGGGKE 306
G+DT S T+ W M+ A K++ GKE
Sbjct: 901 AGTDTASATIIWIMSELIRNPKAMKRAQEEVRDLVTGKE 1017
Score = 29.6 bits (65), Expect = 1.8
Identities = 35/112 (31%), Positives = 46/112 (40%), Gaps = 2/112 (1%)
Frame = +2
Query: 17 LATTFN*EHFLIALFNPSHKSMVL**CCILVSFLCWWFPQYIWPRKSCKHMA*FLRTDQA 76
LAT+ + I FN SM L C V + W FP WP + K M F
Sbjct: 128 LATSTSLVRCHINPFNTFQISMDLSCSCSWVQYPPW*FPLLRWPERFSKTMTQFSLAG-L 304
Query: 77 RH*QKPYSMVVRTLRFHLMAIHGDRKRNCV*MNC*VRKGCNQYSL--LEKSN 126
R+ + V+ H G + +C*VRKG N+ L L+KSN
Sbjct: 305 RYTLQTV*DTVQP*VLHRTVSTGGK*GRS*SWSC*VRKGFNRLKL*GLKKSN 460
>TC231530 homologue to UP|C7DA_SOYBN (O48923) Cytochrome P450 71D10 ,
complete
Length = 1661
Score = 56.2 bits (134), Expect = 2e-08
Identities = 29/91 (31%), Positives = 58/91 (62%), Gaps = 4/91 (4%)
Frame = +1
Query: 203 LMFSLAKLKKIKDSSEEMDDFLDRVIVEHKMSRRDPKKK----DFLDILLQLQDDGLTEF 258
+M + KL+K+ ++ + L +I EHK R +++ D +D+LL+ Q + +EF
Sbjct: 706 MMGATGKLEKVHRVTDRV---LQDIIDEHKNRNRSSEEREAVEDLVDVLLKFQKE--SEF 870
Query: 259 ELTQNDLKALLMNMFLGGSDTTSTTLEWAMA 289
LT +++KA++ ++F+GG +T+S+ +EW M+
Sbjct: 871 RLTDDNIKAVIQDIFIGGGETSSSVVEWGMS 963
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.353 0.156 0.562
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,301,090
Number of Sequences: 63676
Number of extensions: 216129
Number of successful extensions: 3313
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 3260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3297
length of query: 313
length of database: 12,639,632
effective HSP length: 97
effective length of query: 216
effective length of database: 6,463,060
effective search space: 1396020960
effective search space used: 1396020960
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.5 bits)
S2: 59 (27.3 bits)
Medicago: description of AC124952.12