TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124951.10 - phase: 0 
         (446 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE555567 similar to GP|18087557|gb AT3g27930/K24A2_2 {Arabidopsi...   238  4e-63
BE058948                                                              204  7e-53
TC234641 weakly similar to UP|Q8W106 (Q8W106) AT3g27930/K24A2_2,...   140  2e-33
BG511631 similar to GP|18087557|gb| AT3g27930/K24A2_2 {Arabidops...    34  0.12
CF921625                                                               28  6.4
BU090749                                                               28  8.3

>BE555567 similar to GP|18087557|gb AT3g27930/K24A2_2 {Arabidopsis thaliana},
           partial (28%)
          Length = 422

 Score =  238 bits (607), Expect = 4e-63
 Identities = 119/157 (75%), Positives = 128/157 (80%)
 Frame = +2

Query: 133 SCAYYPRYGFGAFGVFPLLLKNRTSSQIATFTADKVRQLYRETSQDSGVMGLRYGSGNLS 192
           +CAYYP+YGFGAFGVFPLLLK R                  E+SQD G+MGLRYGSGNLS
Sbjct: 5   ACAYYPKYGFGAFGVFPLLLKKR------------------ESSQDYGLMGLRYGSGNLS 130

Query: 193 CGVTLMPFAKKDELPKSVWLVSKIGRVTAGVQYEPHHENAKLSNLMNWSCAMAYGVGSQS 252
            GVTL+PFA KDELPKS WLVSK+GR+TAGVQYEP   NAKLSNLMNWSCAM YGVGS S
Sbjct: 131 FGVTLLPFAMKDELPKSAWLVSKMGRLTAGVQYEPQQGNAKLSNLMNWSCAMGYGVGSGS 310

Query: 253 PLSPSFNFSLELVKSSQFVASFYQHMVVQRRVKNPLE 289
           PL PSFNF+LELVKSSQF+ASFYQHMVVQRRVKNPLE
Sbjct: 311 PLCPSFNFNLELVKSSQFIASFYQHMVVQRRVKNPLE 421


>BE058948 
          Length = 411

 Score =  204 bits (519), Expect = 7e-53
 Identities = 97/125 (77%), Positives = 107/125 (85%)
 Frame = +3

Query: 3   IWKWIVSWYRNEVESPPPVVLVPPLFDFPPIAARNRMLESSYDVVFGKLALRCLFNDYFQ 62
           +WKW+ S  R     PPPVVLVPPLFDFPP+AARNRML SSYDVVFGKLAL  LF DYF 
Sbjct: 42  MWKWLFS--REPAPPPPPVVLVPPLFDFPPLAARNRMLHSSYDVVFGKLALTSLFEDYFH 215

Query: 63  QPKHFVTRIMLKPIDDPHVDLIATVSGPLDQKPDENINGNALFRWQSDVNDPHTFMDLYV 122
           Q ++F TRIMLKPI+DPHVDLIATVSGPLD KP ++I G+ALFRWQSDVNDPHTFMDLYV
Sbjct: 216 QARNFTTRIMLKPIEDPHVDLIATVSGPLDHKPKDSIAGDALFRWQSDVNDPHTFMDLYV 395

Query: 123 STSDP 127
           STS+P
Sbjct: 396 STSNP 410


>TC234641 weakly similar to UP|Q8W106 (Q8W106) AT3g27930/K24A2_2, partial
           (16%)
          Length = 384

 Score =  140 bits (352), Expect = 2e-33
 Identities = 65/75 (86%), Positives = 73/75 (96%)
 Frame = +3

Query: 372 ADGQVQYGFGLQSESLREASYQRADPNFVMLTPSKEHLAEGIVWETGKRPMLQSDIDAGH 431
           ADG++QYGFG+QSESLREASYQRADPN+VMLT SKEHLA+GIVW+ GKRPML+SDIDAGH
Sbjct: 12  ADGKMQYGFGIQSESLREASYQRADPNYVMLTQSKEHLAKGIVWKAGKRPMLKSDIDAGH 191

Query: 432 FDGLPRELRPLDKIL 446
           FDGLPREL+PLDKIL
Sbjct: 192 FDGLPRELQPLDKIL 236


>BG511631 similar to GP|18087557|gb| AT3g27930/K24A2_2 {Arabidopsis
           thaliana}, partial (3%)
          Length = 297

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -2

Query: 257 SFNFSLELVKSSQFVASFYQHMVVQRRV 284
           S     + + + QF+ASFYQHM VQRRV
Sbjct: 152 SILLKFQSLNNLQFIASFYQHMAVQRRV 69


>CF921625 
          Length = 523

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 10/23 (43%), Positives = 15/23 (64%)
 Frame = +1

Query: 10  WYRNEVESPPPVVLVPPLFDFPP 32
           W + +V +PPP +  P +F FPP
Sbjct: 241 WEKKKVFNPPPPLFNPKIFFFPP 309


>BU090749 
          Length = 405

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 13/41 (31%), Positives = 21/41 (50%)
 Frame = -2

Query: 355 SWWKPSFTFSISATRDRADGQVQYGFGLQSESLREASYQRA 395
           +WW      + +   + A+G+V +  GLQS SL E    +A
Sbjct: 404 AWWLEFSEVASALGEEEAEGEVDHKTGLQSSSLMEERIWKA 282


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.320    0.135    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,512,259
Number of Sequences: 63676
Number of extensions: 279922
Number of successful extensions: 1490
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of query: 446
length of database: 12,639,632
effective HSP length: 100
effective length of query: 346
effective length of database: 6,272,032
effective search space: 2170123072
effective search space used: 2170123072
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)