Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124218.7 + phase: 0 /partial
         (281 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC217803 similar to UP|Q9AT00 (Q9AT00) At1g65410/T8F5_19, partia...   516  e-147
TC215951 similar to UP|Q9SXT3 (Q9SXT3) Multidrug resistance prot...    88  5e-18
TC207459 similar to UP|Q94IH6 (Q94IH6) CjMDR1, partial (30%)           87  6e-18
TC219347 similar to UP|Q9LF78 (Q9LF78) Mitochondrial half-ABC tr...    87  1e-17
TC220745 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-gl...    86  1e-17
TC213020 weakly similar to UP|Q8GU71 (Q8GU71) MDR-like ABC trans...    85  3e-17
TC234765 similar to UP|Q84M24 (Q84M24) AtABCA1, partial (9%)           84  5e-17
TC218418 homologue to UP|Q6X4V5 (Q6X4V5) ABC transporter, partia...    83  2e-16
TC207596 similar to UP|Q7GBY1 (Q7GBY1) Tonoplast ABC transporter...    82  2e-16
TC232373 weakly similar to UP|AB10_MOUSE (Q9JI39) ATP-binding ca...    78  4e-15
TC229551 weakly similar to UP|Q6X4V5 (Q6X4V5) ABC transporter, p...    76  2e-14
TC207563 similar to UP|Q9ZRG2 (Q9ZRG2) P-glycoprotein, partial (...    74  7e-14
TC233020 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-gl...    72  3e-13
TC227035 similar to UP|Q9M1H3 (Q9M1H3) ABC transporter-like prot...    68  4e-12
TC217096 homologue to UP|Q8W1S2 (Q8W1S2) ABC transporter-like pr...    64  8e-11
TC227906 similar to UP|Q8LGN7 (Q8LGN7) Multidrug resistance-asso...    63  2e-10
TC208899 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-gl...    61  5e-10
TC205367 similar to UP|O24525 (O24525) Glutathione-conjugate tra...    59  3e-09
TC230267 similar to UP|O65619 (O65619) Multi resistance protein ...    58  4e-09
TC204017 similar to UP|Q8LGU1 (Q8LGU1) Multidrug-resistance rela...    56  2e-08

>TC217803 similar to UP|Q9AT00 (Q9AT00) At1g65410/T8F5_19, partial (81%)
          Length = 1563

 Score =  516 bits (1330), Expect = e-147
 Identities = 262/281 (93%), Positives = 275/281 (97%)
 Frame = +3

Query: 1   GSSKSEQLNKARDHEDDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGK 60
           GSSKSEQL+ ARDHEDDSDVLIECRDVYKSFGEKKILNGVSFKI+HGEAVGIIGPSGTGK
Sbjct: 279 GSSKSEQLSTARDHEDDSDVLIECRDVYKSFGEKKILNGVSFKIKHGEAVGIIGPSGTGK 458

Query: 61  STILKIIAGLLAPDKGEVYIRGRKRDGLISDDEISGLRIGLVFQSAALFDSLTVRENVGF 120
           ST+LKIIAGLLAPDKGEVYIRG+KR GL+SDD+ISGLRIGLVFQSAALFDSLTVRENVGF
Sbjct: 459 STVLKIIAGLLAPDKGEVYIRGKKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGF 638

Query: 121 LLYEHSSMPEEEISELVKETLAAVGLKGVENRLPSELSGGMKKRVALARSIIFDTTKDSI 180
           LLYEHSSM E++ISELV ETLAAVGLKGVE+RLPSELSGGMKKRVALARSII DTTK+SI
Sbjct: 639 LLYEHSSMSEDQISELVTETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTKESI 818

Query: 181 EPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGNISSYVVVTHQHSTIKRAI 240
           EPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKG+DA GKPGNISSYVVVTHQHSTIKRAI
Sbjct: 819 EPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGQDARGKPGNISSYVVVTHQHSTIKRAI 998

Query: 241 DRLLFLHKGKLVWEGMTHEFTTSTNPIVQQFASGSLDGPIK 281
           DRLLFLHKGK+VWEGMTHEFTTSTNPIVQQFASGSLDGPI+
Sbjct: 999 DRLLFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIR 1121


>TC215951 similar to UP|Q9SXT3 (Q9SXT3) Multidrug resistance protein
           (Fragment), partial (84%)
          Length = 1226

 Score = 87.8 bits (216), Expect = 5e-18
 Identities = 70/239 (29%), Positives = 124/239 (51%), Gaps = 3/239 (1%)
 Frame = +2

Query: 36  ILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEIS 95
           IL G++ +I  G  VG+IGPSG+GKST L+ +  L  P    V++  +     I   ++ 
Sbjct: 281 ILKGINLEIPEGVIVGVIGPSGSGKSTFLRALNRLWEPPSASVFLDAQD----ICHLDVL 448

Query: 96  GLR--IGLVFQSAALFDSLTVRENVGF-LLYEHSSMPEEEISELVKETLAAVGLKGVENR 152
            LR  + ++FQ  ALF+  +V +NV +        + ++E+ +L+   L A       ++
Sbjct: 449 SLRRNVAMLFQLPALFEG-SVADNVRYGPQLRGKKLSDDEVRKLL---LMADLDASFMDK 616

Query: 153 LPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIK 212
             +ELS G  +RVALAR++       +  P+VLL DEPT+ LDPI++  +ED +  V + 
Sbjct: 617 SGAELSVGQAQRVALARTL-------ANSPQVLLLDEPTSALDPISTENIEDAL--VKLN 769

Query: 213 GRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEGMTHEFTTSTNPIVQQF 271
               +       + ++V+H    I+R    +  L  G++V     H  + + +P+ ++F
Sbjct: 770 KNQGM-------TVIMVSHSIKQIQRIAHIVCLLVDGEIVEVLNPHNLSQANHPMAKRF 925


>TC207459 similar to UP|Q94IH6 (Q94IH6) CjMDR1, partial (30%)
          Length = 1329

 Score = 87.4 bits (215), Expect = 6e-18
 Identities = 76/246 (30%), Positives = 122/246 (48%), Gaps = 12/246 (4%)
 Frame = +1

Query: 22  IECRDV---YKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEV 78
           IE R V   Y S  + +I   +S  I  G+ V ++G SG+GKST++ ++     PD G++
Sbjct: 418 IELRHVSFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYNPDSGQI 597

Query: 79  YIRGRKRDGLISDDEISGLR--IGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEEISEL 136
            + G +    I + ++  LR  +GLV Q   LF+  T+R N+ +   +     E EI   
Sbjct: 598 TLDGIE----IRELQLKWLRQQMGLVSQEPVLFNE-TIRANIAY--GKGGDATEAEIIAA 756

Query: 137 VKETLAAVGLKGVE-------NRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDE 189
            +   A   + G++           ++LSGG K+RVA+AR+II         P++LL DE
Sbjct: 757 AEMANAHKFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAII-------KSPKILLLDE 915

Query: 190 PTAGLDPIASTVVEDLIRSVHIKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKG 249
            T+ LD  +  VV+D +  V +             + VVV H+ STIK A D +  +  G
Sbjct: 916 ATSALDAESERVVQDALDKVMVN-----------RTTVVVAHRLSTIKNA-DVIAVVKNG 1059

Query: 250 KLVWEG 255
            +V +G
Sbjct: 1060VIVEKG 1077


>TC219347 similar to UP|Q9LF78 (Q9LF78) Mitochondrial half-ABC transporter,
           partial (36%)
          Length = 1085

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 16/258 (6%)
 Frame = +1

Query: 22  IECRDVYKSF-GEKKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYI 80
           I+  +V+ S+  E+KIL+G+SF +  G++V I+G SG+GKSTIL+++     P  G + I
Sbjct: 52  IQFENVHFSYLTERKILDGISFVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSGSIKI 231

Query: 81  RGRKRDGLISDDEISGLR--IGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEEISELVK 138
                D  I +  +  LR  IG+V Q   LF+  T+  N+    Y   S  EEE+ E  +
Sbjct: 232 ----DDQNIREVTLESLRKSIGVVPQDTVLFND-TIFHNIH---YGRLSATEEEVYEAAQ 387

Query: 139 ETL-------------AAVGLKGVENRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVL 185
           +                 VG +G+      +LSGG K+RVALAR+ +         P +L
Sbjct: 388 QAAIHNTIMKFPDKYSTVVGERGL------KLSGGEKQRVALARAFL-------KAPAIL 528

Query: 186 LYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLF 245
           L DE T+ LD      +   ++SV            N  + + + H+ +T  +  D ++ 
Sbjct: 529 LCDEATSALDSTTEAEILSALKSV-----------ANNRTSIFIAHRLTTAMQC-DEIIV 672

Query: 246 LHKGKLVWEGMTHEFTTS 263
           L  GK++ +G  HE   S
Sbjct: 673 LENGKVIEQG-PHEVLLS 723


>TC220745 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-glycoprotein,
           partial (18%)
          Length = 1050

 Score = 86.3 bits (212), Expect = 1e-17
 Identities = 79/241 (32%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
 Frame = +3

Query: 36  ILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEIS 95
           I  G S  I    +  ++G SG+G STI+ +I     P KG V I GR     I    + 
Sbjct: 9   IFQGFSIXIDAXRSTALVGQSGSGXSTIIGLIERFYDPMKGIVTIDGRD----IKSYHLR 176

Query: 96  GLR--IGLVFQSAALFDSLTVRENVGF-LLYEHSSMPEEEISELVKETLAAVGLKGVENR 152
            LR  I LV Q   LF   T+REN+ +     ++ + E EI E  +   A   +  +++ 
Sbjct: 177 SLRKHIALVSQEPTLFGG-TIRENIAYGASNNNNKVDETEIIEAARAANAHDFIASLKDG 353

Query: 153 LPS-------ELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDL 205
             +       +LSGG K+R+A+AR+I+ +       PEVLL DE T+ LD  +  +V+D 
Sbjct: 354 YDTSCRDRGVQLSGGQKQRIAIARAILKN-------PEVLLLDEATSALDSQSEKLVQDA 512

Query: 206 IRSVHIKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEGMTHEFTTSTN 265
           +  V + GR +          VVV H+ STI+   D +  L KGK+V +G TH    +  
Sbjct: 513 LERVMV-GRTS----------VVVAHRLSTIQNC-DLIAVLDKGKVVEKG-THSSLLAHG 653

Query: 266 P 266
           P
Sbjct: 654 P 656


>TC213020 weakly similar to UP|Q8GU71 (Q8GU71) MDR-like ABC transporter,
           partial (18%)
          Length = 864

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 72/251 (28%), Positives = 123/251 (48%), Gaps = 17/251 (6%)
 Frame = +1

Query: 40  VSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEISG--- 96
           ++ ++  G+++ ++G SG+GKST++ ++     PD G V         L+ + +I     
Sbjct: 7   LNLRVPAGKSLAVVGQSGSGKSTVISLVMRFYDPDSGLV---------LVDECDIKNLNL 159

Query: 97  ----LRIGLVFQSAALFDSLTVRENVGFLLYEHSSM----------PEEEISELVKETLA 142
               LRIGLV Q  ALF S TV EN+ +   E S +            E IS + +    
Sbjct: 160 RSLRLRIGLVQQEPALF-STTVYENIKYGKEEASEIEVMKAAKAANAHEFISRMPEGYKT 336

Query: 143 AVGLKGVENRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVV 202
            VG +GV      +LSGG K+RVA+AR+I+ D       P +LL DE T+ LD ++  +V
Sbjct: 337 EVGERGV------QLSGGQKQRVAIARAILKD-------PSILLLDEATSALDTVSERLV 477

Query: 203 EDLIRSVHIKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEGMTHEFTT 262
           ++ +  + ++GR          + ++V H+ ST++ A + +  L  G++   G       
Sbjct: 478 QEALDKL-MEGR----------TTILVAHRLSTVRDA-NSIAVLQNGRVAEMGSHERLMA 621

Query: 263 STNPIVQQFAS 273
            +  I +Q  S
Sbjct: 622 KSGSIYKQLVS 654


>TC234765 similar to UP|Q84M24 (Q84M24) AtABCA1, partial (9%)
          Length = 535

 Score = 84.3 bits (207), Expect = 5e-17
 Identities = 54/178 (30%), Positives = 93/178 (51%)
 Frame = +3

Query: 32  GEKKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISD 91
           G K  ++ ++F ++ GE  G +G +G GK+T + ++ G   P  G  +I G+    + S 
Sbjct: 12  GRKVAVDSLTFSVQEGECFGFLGTNGAGKTTTISMLCGEECPSDGTAFIFGKD---ICSH 182

Query: 92  DEISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEEISELVKETLAAVGLKGVEN 151
            + +   IG   Q  AL + LTVRE++  L      +P+  I  +V E L    L    N
Sbjct: 183 PKAARRYIGYCPQFDALLEFLTVREHLE-LYARIKGVPDFAIDNVVMEKLTEFDLLKHAN 359

Query: 152 RLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSV 209
           +    LSGG K+++++A ++I D       P +++ DEP+ G+DPIA   + D+I  +
Sbjct: 360 KPSFSLSGGNKRKLSVAIAMIGD-------PPIVILDEPSTGMDPIAKRFMWDVISRI 512


>TC218418 homologue to UP|Q6X4V5 (Q6X4V5) ABC transporter, partial (49%)
          Length = 1220

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 66/236 (27%), Positives = 110/236 (45%), Gaps = 10/236 (4%)
 Frame = +1

Query: 34  KKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPD---KGEVYIRGRKRDGLIS 90
           + +L G++     G    ++GPSG+GKST+L  ++  LA +    G + + GRK      
Sbjct: 292 QNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKA----- 456

Query: 91  DDEISGLRIGLVFQSAALFDSLTVRENVGF--LLYEHSSMPEEEISELVKETLAAVGLKG 148
             ++S      V Q   L  +LTVRE + +   L    +MP  +   LV+ T+ A+GL+ 
Sbjct: 457 --KLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDNMPWADKRALVESTIVAMGLQD 630

Query: 149 VENRLPSE-----LSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVE 203
             + +        +SGG K+RV++A  I+       + P +L  DEPT+GLD  ++  V 
Sbjct: 631 CADTVIGNWHLRGISGGEKRRVSIALEIL-------MRPRLLFLDEPTSGLDSASAFFVT 789

Query: 204 DLIRSVHIKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEGMTHE 259
             +R++   GR  +           +    S +    D+L  L  GK V+ G   E
Sbjct: 790 QTLRALARDGRTVIAS---------IHQPSSEVFELFDQLYLLSSGKTVYFGQASE 930


>TC207596 similar to UP|Q7GBY1 (Q7GBY1) Tonoplast ABC transporter IDI7,
           partial (35%)
          Length = 1076

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 73/242 (30%), Positives = 121/242 (49%), Gaps = 15/242 (6%)
 Frame = +2

Query: 41  SFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEIS----G 96
           + K+  G  V ++GPSG GKSTI  +I     P KG++ + G      +   EIS     
Sbjct: 2   TLKLHPGSKVALVGPSGGGKSTIANLIERFYDPTKGKILLNG------VPLVEISHKHLH 163

Query: 97  LRIGLVFQSAALFDSLTVRENVGF--------LLYEHSSM---PEEEISELVKETLAAVG 145
            +I +V Q   LF + ++ EN+ +        +  E+++      E IS+  ++    VG
Sbjct: 164 RKISIVSQEPTLF-NCSIEENIAYGFDGKVNDVDIENAAKMANAHEFISKFPEKYQTFVG 340

Query: 146 LKGVENRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDL 205
            +GV       LSGG K+R+A+AR+++ D       P++LL DE T+ LD  +  +V+D 
Sbjct: 341 ERGV------RLSGGQKQRIAIARALLMD-------PKILLLDEATSALDAESEYLVQDA 481

Query: 206 IRSVHIKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEGMTHEFTTSTN 265
           + S+ +KGR  L          V+ H+ ST+K A D +  +  G++V  G  HE   + N
Sbjct: 482 MESL-MKGRTVL----------VIAHRLSTVKTA-DTVAVISDGQVVERG-NHEELLNKN 622

Query: 266 PI 267
            +
Sbjct: 623 GV 628


>TC232373 weakly similar to UP|AB10_MOUSE (Q9JI39) ATP-binding cassette,
           sub-family B, member 10, mitochondrial precursor
           (ATP-binding cassette transporter 10) (ABC transporter
           10 protein) (ABC-mitochondrial erythroid protein)
           (ABC-me protein), partial (24%)
          Length = 742

 Score = 78.2 bits (191), Expect = 4e-15
 Identities = 66/225 (29%), Positives = 108/225 (47%), Gaps = 13/225 (5%)
 Frame = +1

Query: 44  IRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEISGLR--IGL 101
           I  GE V + G SG+GKST++ ++     PD G++ + G +    I   ++   R  +GL
Sbjct: 7   IHAGETVALAGESGSGKSTVISLLQRFYEPDSGQITLDGTE----IQKLQLKWFRQQMGL 174

Query: 102 VFQSAALFDSLTVRENVGF-----------LLYEHSSMPEEEISELVKETLAAVGLKGVE 150
           V Q   LF+  T+R N+ +           +     +     IS L +     VG +G+ 
Sbjct: 175 VSQEPVLFND-TIRTNIAYGKGGDATEAEIIAATELANAHTFISSLQQGYDTIVGERGI- 348

Query: 151 NRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 210
                +LSGG K+RVA+AR+I+ +       P++LL DE T+ LD  +  VV+D +  V 
Sbjct: 349 -----QLSGGQKQRVAIARAIVKN-------PKILLLDEATSALDVESERVVQDALDQVM 492

Query: 211 IKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEG 255
           +             + +VV H+ STIK A D +  +  G +  +G
Sbjct: 493 VD-----------RTTIVVAHRLSTIKDA-DSIAVVQNGVIAEQG 591


>TC229551 weakly similar to UP|Q6X4V5 (Q6X4V5) ABC transporter, partial (34%)
          Length = 1436

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 11/233 (4%)
 Frame = +3

Query: 34  KKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPD---KGEVYIRGRKRDGLIS 90
           K IL+G++   + G  + IIGPSG+GKST+L  +AG L  +    G++ I G K+     
Sbjct: 69  KLILHGLTGYAQPGRLLAIIGPSGSGKSTLLDALAGRLTSNIKQTGKILINGHKQ----- 233

Query: 91  DDEISGLRIGLVFQSAALFDSLTVRENVGF--LLYEHSSMPEEEISELVKETLAAVGLKG 148
             E++    G V Q  A+   LT  E + +  +L   ++M  EE  E    TL  +GL+ 
Sbjct: 234 --ELAYGTSGYVTQDDAMLSCLTAGETLYYSAMLQFPNTMSVEEKKERADMTLREMGLQD 407

Query: 149 VENRLP-----SELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVE 203
             N          LSGG ++R+++   I+         P++L  DEPT+GLD  AS  V 
Sbjct: 408 AINTRVGGWNCKGLSGGQRRRLSICIEIL-------THPKLLFLDEPTSGLDSAASYYVM 566

Query: 204 DLIRSVHIKGRDALGKPGNISSYVVVTHQHST-IKRAIDRLLFLHKGKLVWEG 255
             I ++       + + G   + V   HQ S+ + +    L  L  G+ V+ G
Sbjct: 567 SGIANL-------IQRDGIQRTIVASVHQPSSEVFQLFHDLFLLSSGETVYFG 704


>TC207563 similar to UP|Q9ZRG2 (Q9ZRG2) P-glycoprotein, partial (24%)
          Length = 1164

 Score = 73.9 bits (180), Expect = 7e-14
 Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 9/223 (4%)
 Frame = +1

Query: 42  FKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEISGLR--I 99
           F  R G+ + ++GPSG GKS+I+ +I     P  G V I G+     I    +  LR  I
Sbjct: 235 FVRRAGKTLALVGPSGCGKSSIIALIQRFYDPTSGRVMIDGKD----IRKYNLKSLRRHI 402

Query: 100 GLVFQSAALFDSLTVRENVGFLLYEHSSMPEEEISELVKETLAAVGLKGVENRLPS---- 155
            +V Q   LF + T+ EN+    Y H S  E EI E      A   + G+ +   +    
Sbjct: 403 SVVPQEPCLF-ATTIYENIA---YGHESATEAEIIEAATLANAHKFISGLPDGYKTFVGE 570

Query: 156 ---ELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIK 212
              +LSGG K+R+A+AR+ +        + E++L DE T+ LD  +        RSV   
Sbjct: 571 RGVQLSGGQKQRIAVARAFV-------RKAELMLLDEATSALDAESE-------RSV--- 699

Query: 213 GRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEG 255
            ++AL +  +  + ++V H+ STI+ A + +  +  GK+  +G
Sbjct: 700 -QEALDRASSGKTTIIVAHRLSTIRNA-NLIAVIDDGKVAEQG 822


>TC233020 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-glycoprotein,
           partial (15%)
          Length = 605

 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 16/230 (6%)
 Frame = +1

Query: 39  GVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGL-ISDDEISGL 97
           G   ++  G+ V ++G SG+GKST++ ++     P  GEV +     DG+ I   ++  L
Sbjct: 16  GTRLRVPAGKRVALVGESGSGKSTVIALLQRFYDPCGGEVRV-----DGVGIQKLQLKWL 180

Query: 98  R--IGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEEISELVKETLA------------- 142
           R  +GLV Q  ALF + ++++N+   L+      ++++ E  K   A             
Sbjct: 181 RSCMGLVSQEPALF-ATSIKDNI---LFGKEDATQDQVVEAAKAAHAHNFISLLPHGYHT 348

Query: 143 AVGLKGVENRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVV 202
            VG +G+      ++SGG K+R+A+AR+II        +P +LL DE T+ LD  +  +V
Sbjct: 349 QVGERGI------QMSGGQKQRIAIARAII-------KKPRILLLDEATSALDSESERLV 489

Query: 203 EDLIRSVHIKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLV 252
           ++ + +       A+G      + +++ H+ STI+ A D +  +  GK++
Sbjct: 490 QEALDNA------AVG-----CTTIIIAHRLSTIQNA-DLIAVVGGGKII 603


>TC227035 similar to UP|Q9M1H3 (Q9M1H3) ABC transporter-like protein
           (At3g54540), partial (56%)
          Length = 1561

 Score = 68.2 bits (165), Expect = 4e-12
 Identities = 59/161 (36%), Positives = 75/161 (45%), Gaps = 2/161 (1%)
 Frame = +2

Query: 37  LNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEISG 96
           L+ V   I  G  V I+GP+G GKST+L ++AG L P +GEV  R +K            
Sbjct: 596 LSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVR-RSQK------------ 736

Query: 97  LRIGLVFQSAALFDSLTVREN-VGFLLYEHSSMPEEEISELVKETLAAVGLKGVENRLP- 154
           LRIG   Q     D LT+ E  V +LL  H         E V+  L   GL    +  P 
Sbjct: 737 LRIGRYSQH--FVDLLTMDETAVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPI 910

Query: 155 SELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLD 195
           ++LSGG K RV         T+     P +LL DEPT  LD
Sbjct: 911 AKLSGGQKARVVF-------TSISMSNPHILLLDEPTNHLD 1012



 Score = 35.0 bits (79), Expect = 0.038
 Identities = 28/100 (28%), Positives = 45/100 (45%)
 Frame = +2

Query: 152 RLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHI 211
           R     SGG + R++LAR++        ++P +LL DEPT  LD  A   +E+ +     
Sbjct: 5   RPTKSFSGGWRMRISLARALF-------VQPTLLLLDEPTNHLDLRAVLWLEEYL----C 151

Query: 212 KGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKL 251
           + +  L         VVV+H    +      ++ LH  KL
Sbjct: 152 RWKKTL---------VVVSHDRDFLNTVCTEIIHLHDLKL 244


>TC217096 homologue to UP|Q8W1S2 (Q8W1S2) ABC transporter-like protein,
            complete
          Length = 2478

 Score = 63.9 bits (154), Expect = 8e-11
 Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
 Frame = +3

Query: 36   ILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEIS 95
            +   ++F I     + ++GP+G GKSTILK+IAG L P  G V+   + R  + S   + 
Sbjct: 1668 LFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGDLQPSSGTVFRSAKVRIAVFSQHHVD 1847

Query: 96   GLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEEISELVKETLAAVGLKGVENRLPS 155
            GL +                  + +++  +  +PE+++        A +G  GV   L  
Sbjct: 1848 GLDLS--------------SNPLLYMMRCYPGVPEQKLR-------AHLGSFGVTGNLAL 1964

Query: 156  E----LSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHI 211
            +    LSGG K RVA A+ I F       +P ++L DEP+  LD  A   VE LI+ +  
Sbjct: 1965 QPMYTLSGGQKSRVAFAK-ITFK------KPHIILLDEPSNHLDLDA---VEALIQGL-- 2108

Query: 212  KGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKL 251
                 L + G     ++V+H    I  +++ L  + +G++
Sbjct: 2109 ----VLFQGG----ILMVSHDEHLISGSVEELWVVSEGRV 2204



 Score = 44.3 bits (103), Expect = 6e-05
 Identities = 60/231 (25%), Positives = 96/231 (40%), Gaps = 34/231 (14%)
 Frame = +3

Query: 30  SFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPD---------KGEVYI 80
           S G + ++      +  G   G++G +GTGK+T L+ +A + A D           E  +
Sbjct: 666 SVGGRDLIVDGCVTLSFGRHYGLVGRNGTGKTTFLRHMA-MHAIDGVPRNCQILHVEQEV 842

Query: 81  RGRKRDGL-------ISDDEISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEEI 133
            G     L       I   ++      LV Q   L D     +  G +  +  S   EEI
Sbjct: 843 TGDATTALQCVLNADIERTQLLDEETQLVAQQRELEDKNEKGDLNGVVGRDDISKRLEEI 1022

Query: 134 SELVK-------ETLAAVGLKGV------ENRLPSELSGGMKKRVALARSIIFDTTKDSI 180
            + ++       E  AA  L G+      + +     SGG + R+ALAR++        I
Sbjct: 1023YKRLEHIDADSAEARAASILAGLSFTPEMQKKATKTFSGGWRMRIALARALF-------I 1181

Query: 181 EPEVLLYDEPTAGLD-----PIASTVVEDLIRSVHIKGRDALGKPGNISSY 226
           EP++LL DEPT  LD        +TVV D+I   H++ +      GN  ++
Sbjct: 1182EPDILLLDEPTNHLDLHAVREFLNTVVTDII---HLQNQKLTTYKGNYDAF 1325


>TC227906 similar to UP|Q8LGN7 (Q8LGN7) Multidrug resistance-associated
           protein MRP1 (Fragment), partial (49%)
          Length = 1394

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 52/180 (28%), Positives = 90/180 (49%), Gaps = 8/180 (4%)
 Frame = +2

Query: 36  ILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEIS 95
           +L G+S  I  GE +G++G +G+GKST+++++  L+ P  G++ + G     L   D  S
Sbjct: 479 VLKGISLTIEAGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKITVDGINICTLGLHDVRS 658

Query: 96  GLRIGLVFQSAALFDSLTVRENVGFL-LYEH----SSMPEEEISELV---KETLAAVGLK 147
             R G++ Q   LF   TVR N+  L LY       S+   ++ ++V    E L A  + 
Sbjct: 659 --RFGIIPQEPVLFQG-TVRSNIDPLGLYSEEEIWKSLERCQLKDVVAAKPEKLEAPVVD 829

Query: 148 GVENRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIR 207
           G +N      S G ++ + L R ++  +       ++L  DE TA +D     V++ +IR
Sbjct: 830 GGDN-----WSVGQRQLLCLGRIMLKSS-------KILFMDEATASVDSQTDAVIQKIIR 973


>TC208899 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-glycoprotein,
           partial (14%)
          Length = 983

 Score = 61.2 bits (147), Expect = 5e-10
 Identities = 61/183 (33%), Positives = 90/183 (48%), Gaps = 10/183 (5%)
 Frame = +3

Query: 86  DGL-ISDDEISGLR--IGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEEISELVKETLA 142
           DG+ I    +  LR  I LV Q   LF   T+REN+ +   E   + E EI E  +   A
Sbjct: 15  DGMDIKSYNLKSLRKHIALVSQEPTLFGG-TIRENIAYGRCESERVDESEIIEAARAANA 191

Query: 143 AVGLKGVENRLPS-------ELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLD 195
              +  ++    +       +LSGG K+R+A+AR+I+ +       P+VLL DE T+ LD
Sbjct: 192 HDFIASLKEGYETWCGDKGVQLSGGQKQRIAIARAILKN-------PKVLLLDEATSALD 350

Query: 196 PIASTVVEDLIRSVHIKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEG 255
             +  VV+D +  V ++GR            VVV H+ STI    D +  L KG++V  G
Sbjct: 351 GPSEKVVQDTLMRV-MRGRTG----------VVVAHRLSTIHNC-DVIGVLEKGRVVEIG 494

Query: 256 MTH 258
            TH
Sbjct: 495 -TH 500


>TC205367 similar to UP|O24525 (O24525) Glutathione-conjugate transporter
           AtMRP4, partial (23%)
          Length = 1548

 Score = 58.5 bits (140), Expect = 3e-09
 Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
 Frame = +2

Query: 36  ILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEIS 95
           +L G++  I  GE +G++G +G+GKST++++   L+ P  G++ I G     L   D  S
Sbjct: 389 VLKGITLSINGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDISALGLHDLRS 568

Query: 96  GLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEEISELVKETLAAVGLKGVENRLPS 155
             R G++ Q   LF+  TVR N+           +EEI + ++       +     +L +
Sbjct: 569 --RFGIIPQEPVLFEG-TVRSNID----PTGQYTDEEIWKSLERCQLKDAVASKPEKLDT 727

Query: 156 EL-------SGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIR 207
            +       S G ++ + L R ++        +  +L  DE TA +D     V++ +IR
Sbjct: 728 SVVDNGDNWSVGQRQLLCLGRVML-------KQSRLLFMDEATASVDSQTDAVIQKIIR 883


>TC230267 similar to UP|O65619 (O65619) Multi resistance protein
           (Sulfonylurea receptor-like protein), partial (16%)
          Length = 1197

 Score = 58.2 bits (139), Expect = 4e-09
 Identities = 48/181 (26%), Positives = 93/181 (50%), Gaps = 8/181 (4%)
 Frame = +3

Query: 36  ILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEIS 95
           +L+GV+     G+ +GI+G +G+GKST+++ +  L+ P  G + I        IS+  + 
Sbjct: 33  VLHGVTCTFPGGKKIGIVGRTGSGKSTLIQALFRLIEPASGSILIDNIN----ISEIGLH 200

Query: 96  GLR--IGLVFQSAALFDSLTVRENVGFLLYEHS------SMPEEEISELVKETLAAVGLK 147
            LR  + ++ Q   LF+  T+  N+   L EHS      ++ + ++ E+++E    +   
Sbjct: 201 DLRSHLSIIPQDPTLFEG-TI*GNLD-PLDEHSDKEIWEALDKSQLGEVIREKGQQLDTP 374

Query: 148 GVENRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIR 207
            +EN      S G ++ VAL R+++        +  +L+ DE TA +D     +++ +IR
Sbjct: 375 VLEN--GDNWSVGQRQLVALGRALL-------QQSRILVLDEATASVDTATDNLIQKIIR 527

Query: 208 S 208
           S
Sbjct: 528 S 530


>TC204017 similar to UP|Q8LGU1 (Q8LGU1) Multidrug-resistance related protein,
           partial (31%)
          Length = 1388

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
 Frame = +3

Query: 36  ILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEIS 95
           +L G++   + G  VG++G +G+GKST++  +  L+ P KG + I G     +   D   
Sbjct: 495 VLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVDPAKGYILIDGINICSIGLKD--L 668

Query: 96  GLRIGLVFQSAALFDSLTVRENVGFL-LYEHSSMPEEEISELVKETLAAVGLKGVENRLP 154
            +++ ++ Q   LF   ++R N+  L LY      ++EI E +++      +  + N L 
Sbjct: 669 RMKLSIIPQEPTLFKG-SIRTNLDPLGLYS-----DDEIWEALEKCQLKETISRLPNLLD 830

Query: 155 SELSG-------GMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIR 207
           S +S        G ++   L R ++           +L+ DE TA +D     +++ +IR
Sbjct: 831 SSVSDEGGNWSLGQRQLFCLGRVLL-------KRNRILVLDEATASIDSATDAILQQIIR 989

Query: 208 SVHIKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLV 252
              ++            + + V H+  T+  + D ++ L  GKLV
Sbjct: 990 QEFVE-----------CTVITVAHRVPTVIDS-DMVMVLSYGKLV 1088


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.315    0.137    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,425,387
Number of Sequences: 63676
Number of extensions: 109933
Number of successful extensions: 471
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of query: 281
length of database: 12,639,632
effective HSP length: 96
effective length of query: 185
effective length of database: 6,526,736
effective search space: 1207446160
effective search space used: 1207446160
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)


Medicago: description of AC124218.7