BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124214.17 - phase: 0
(362 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226172 similar to UP|Q8VZI2 (Q8VZI2) AT4g33700/T16L1_190, part... 510 e-145
TC210144 similar to UP|Q8VZI2 (Q8VZI2) AT4g33700/T16L1_190, part... 333 e-109
AW132688 similar to GP|19715640|gb At1g47330/T3F24_2 {Arabidopsi... 184 5e-47
TC209827 158 4e-39
TC207787 147 7e-36
BM269811 weakly similar to GP|17381276|gb| AT4g33700/T16L1_190 {... 105 4e-23
TC207723 similar to UP|Q75LY7 (Q75LY7) Expressed protein, partia... 102 3e-22
BE661737 82 1e-20
TC230466 similar to UP|Q8RY60 (Q8RY60) At1g47330/T3F24_2, partia... 62 3e-10
CA801895 54 8e-08
CO979798 47 1e-05
TC214156 similar to UP|Q9FQF0 (Q9FQF0) Glutathione S-transferase... 33 0.15
TC230388 UP|Q9FQF2 (Q9FQF2) Glutathione S-transferase GST 6 , c... 33 0.26
TC207810 homologue to UP|Q9LG18 (Q9LG18) F14J16.20, partial (14%) 33 0.26
TC204303 UP|Q9FQF0 (Q9FQF0) Glutathione S-transferase GST 8 , c... 30 1.3
TC225038 similar to UP|Q41025 (Q41025) Histone H1, partial (67%) 30 1.3
BF068794 30 1.7
TC214345 UP|Q9FQF0 (Q9FQF0) Glutathione S-transferase GST 8 , p... 29 2.9
TC227896 similar to GB|AAO63329.1|28950811|BT005265 At5g21920 {A... 29 2.9
TC225033 similar to UP|O65758 (O65758) Histone H1, partial (81%) 29 3.8
>TC226172 similar to UP|Q8VZI2 (Q8VZI2) AT4g33700/T16L1_190, partial (62%)
Length = 1134
Score = 510 bits (1313), Expect = e-145
Identities = 249/279 (89%), Positives = 268/279 (95%)
Frame = +3
Query: 84 FPISKLLDYLLGHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTA 143
FPISKLLD+LLGHR+EALFRRAELKTLV+LHGNEAGKGGELTHDETTIIAGALELSEKTA
Sbjct: 3 FPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTA 182
Query: 144 SDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPE 203
SDAMTPISETF +DINSKLDRELM EILEKGHSRVPVYYEQ TNIIGL+L+KNLLT+HPE
Sbjct: 183 SDAMTPISETFTVDINSKLDRELMNEILEKGHSRVPVYYEQPTNIIGLVLVKNLLTVHPE 362
Query: 204 DESPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCDKTKQPSSKNDSNDSVK 263
DE+PVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVR+CDKT Q SS+N++NDSV+
Sbjct: 363 DEAPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRRCDKTNQQSSQNNANDSVR 542
Query: 264 EVKVDIDGEKPLQEKVLKPKIPIQKWKSFPNTNKSNRGGSRSRKWSKNMYSDILEIDGSP 323
+VKVDIDGEKP +EK LKPK+P+ KWKSFPNTNKS+ GSRSRKWSKNMYSDILEIDGSP
Sbjct: 543 DVKVDIDGEKPPKEKALKPKMPLHKWKSFPNTNKSSNRGSRSRKWSKNMYSDILEIDGSP 722
Query: 324 LPNIPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 362
LP +PEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS
Sbjct: 723 LPKLPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 839
>TC210144 similar to UP|Q8VZI2 (Q8VZI2) AT4g33700/T16L1_190, partial (54%)
Length = 1167
Score = 333 bits (854), Expect(2) = e-109
Identities = 166/209 (79%), Positives = 185/209 (88%)
Frame = +2
Query: 154 FAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESPVKSVTI 213
F + + SKLDR+LM ILEKGHSRVPVYYEQ TNIIGL+L+KNLLTI PE+E PVK+VTI
Sbjct: 194 FLLILISKLDRDLMNLILEKGHSRVPVYYEQPTNIIGLVLVKNLLTIDPEEEIPVKNVTI 373
Query: 214 RRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCDKTKQPSSKNDSNDSVKEVKVDIDGEK 273
RRIPRVPE++PLYDILNEFQKGHSHMAVVVR C+KT Q SS N N V++VKVDIDGEK
Sbjct: 374 RRIPRVPETLPLYDILNEFQKGHSHMAVVVRHCEKTGQQSSNN--NADVRDVKVDIDGEK 547
Query: 274 PLQEKVLKPKIPIQKWKSFPNTNKSNRGGSRSRKWSKNMYSDILEIDGSPLPNIPEEEEA 333
QE +LK K +QKWKSFPN+N SNRGGSRSRKWSKNMYSDILEIDG+ LP++PE+EEA
Sbjct: 548 NPQENMLKTKRSLQKWKSFPNSNNSNRGGSRSRKWSKNMYSDILEIDGNSLPSLPEKEEA 727
Query: 334 VGIITMEDVIEELLQEEIFDETDHHFEDS 362
VGIITMEDVIEELLQEEIFDETDHHFEDS
Sbjct: 728 VGIITMEDVIEELLQEEIFDETDHHFEDS 814
Score = 79.7 bits (195), Expect(2) = e-109
Identities = 39/44 (88%), Positives = 42/44 (94%)
Frame = +1
Query: 118 AGKGGELTHDETTIIAGALELSEKTASDAMTPISETFAIDINSK 161
AGKGGELTHDETTIIAGALELSEKTASDAMTPI++ F+IDIN K
Sbjct: 85 AGKGGELTHDETTIIAGALELSEKTASDAMTPITDIFSIDINFK 216
>AW132688 similar to GP|19715640|gb At1g47330/T3F24_2 {Arabidopsis thaliana},
partial (25%)
Length = 417
Score = 184 bits (467), Expect = 5e-47
Identities = 87/136 (63%), Positives = 117/136 (85%)
Frame = +1
Query: 28 LDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPIS 87
LDSLV AILISVTLIL+FGEI+PQ++C+RYGL +GA++ P VRVL+ + +P+++PIS
Sbjct: 7 LDSLVHPAAAILISVTLILMFGEILPQAICTRYGLTVGATLAPLVRVLLIVFFPLSYPIS 186
Query: 88 KLLDYLLGHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAM 147
K+LD++LG + AL +RAELKT V+ HGNEAGKGG+LTHDETTII GAL+L+EKTA DAM
Sbjct: 187 KVLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALDLTEKTAKDAM 366
Query: 148 TPISETFAIDINSKLD 163
TPIS+ F++D+++ L+
Sbjct: 367 TPISKAFSLDLDATLN 414
>TC209827
Length = 761
Score = 158 bits (399), Expect = 4e-39
Identities = 74/117 (63%), Positives = 95/117 (80%)
Frame = +1
Query: 16 CGCWFYQALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVL 75
C +ALP++LD L + AI++SVT +L FGE+IPQ++CSRYGLA+GA+ VR+L
Sbjct: 412 CNAVAMEALPLYLDKLFNQFVAIILSVTFVLFFGEVIPQAICSRYGLAVGANFAWLVRIL 591
Query: 76 VWICYPVAFPISKLLDYLLGHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTII 132
+ ICYPV++P+ K+LD+LLGH NEALFRRA+LK LV +HG EAGKGGELTHDETTII
Sbjct: 592 MIICYPVSYPVGKVLDHLLGH-NEALFRRAQLKALVSIHGQEAGKGGELTHDETTII 759
>TC207787
Length = 944
Score = 147 bits (371), Expect = 7e-36
Identities = 90/207 (43%), Positives = 118/207 (56%), Gaps = 15/207 (7%)
Frame = +3
Query: 169 EILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESPVKSVTIRRIPRVPESMPLYDI 228
++L +GHSRVPVY NIIGL+L+K+LLT+ PE E+PV +V+IRRIPRVP MPLYDI
Sbjct: 3 QVLARGHSRVPVYSGNPRNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDI 182
Query: 229 LNEFQKGHSHMAVVVRQCDKTKQPSS--KNDSNDSVKEVKVDIDGEKPLQEK-------- 278
LNEFQKG SHMA VV+ K K+ + N+ K + D PL +K
Sbjct: 183 LNEFQKGSSHMAAVVKARGKGKETPQIIDEEKNEENKSIGGDSQLTTPLLQKQDAKSGSV 362
Query: 279 ---VLKPKIP--IQKWKSFPNTNKSNRGGSRSRKWSKNMYSDILEIDGSPLPNIPEEEEA 333
++KP P I K ++ + G S S+N+ E+ E
Sbjct: 363 VVDIVKPSKPSSINKLSVLQRSDSTTNGPS-----SENI----------------EDGEV 479
Query: 334 VGIITMEDVIEELLQEEIFDETDHHFE 360
+GIIT+EDV EELLQEEI DETD + +
Sbjct: 480 IGIITLEDVFEELLQEEIVDETDEYVD 560
>BM269811 weakly similar to GP|17381276|gb| AT4g33700/T16L1_190 {Arabidopsis
thaliana}, partial (14%)
Length = 420
Score = 105 bits (261), Expect = 4e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +2
Query: 299 NRGGSRSRKWSKNMYSDILEIDGSPLPNIPEEEEAVGIITMEDVIEELLQEEIFDETDHH 358
N+G +SRKWSKNMYSDILEIDG+ +P +PE+E AVGIITMEDVIEELLQ EIFDETDH
Sbjct: 5 NKGSPQSRKWSKNMYSDILEIDGNSIPKLPEKEAAVGIITMEDVIEELLQGEIFDETDHD 184
Query: 359 FEDS 362
FE S
Sbjct: 185 FEVS 196
>TC207723 similar to UP|Q75LY7 (Q75LY7) Expressed protein, partial (33%)
Length = 492
Score = 102 bits (254), Expect = 3e-22
Identities = 54/75 (72%), Positives = 58/75 (77%)
Frame = +2
Query: 1 MLVCILFLYGFNIQNCGCWFYQALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRY 60
+L+C L + C + LPIFLD LVTAWGAILISVTLILLFGEIIPQSVCSRY
Sbjct: 287 LLLCTLLI-------CNAAAMETLPIFLDGLVTAWGAILISVTLILLFGEIIPQSVCSRY 445
Query: 61 GLAIGASVTPFVRVL 75
GLAIGASV PFVRVL
Sbjct: 446 GLAIGASVAPFVRVL 490
>BE661737
Length = 793
Score = 82.4 bits (202), Expect(2) = 1e-20
Identities = 37/73 (50%), Positives = 53/73 (71%)
Frame = +2
Query: 16 CGCWFYQALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVL 75
C +ALPI+LD + + AI++SVT +L FGE+IPQ++CSRYGLA+GA+ V +L
Sbjct: 332 CNAAAMEALPIYLDKMFNQYVAIILSVTFVLFFGEVIPQAICSRYGLAVGANFVWLVPIL 511
Query: 76 VWICYPVAFPISK 88
+ I YP+A+PI K
Sbjct: 512 MIIWYPIAYPIWK 550
Score = 35.4 bits (80), Expect(2) = 1e-20
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 114 HGNEAGKGGELTHDETTIIAGALEL-SEKTASD 145
H E GK GELTHDETTII + + EKTA +
Sbjct: 621 HXQEXGKXGELTHDETTII*WSSRI*LEKTAXN 719
>TC230466 similar to UP|Q8RY60 (Q8RY60) At1g47330/T3F24_2, partial (13%)
Length = 704
Score = 62.4 bits (150), Expect = 3e-10
Identities = 29/43 (67%), Positives = 34/43 (78%)
Frame = +2
Query: 316 ILEIDGSPLPNIPEEEEAVGIITMEDVIEELLQEEIFDETDHH 358
IL++D +PLP P E VG+ITMEDVIEELLQEEI DETD +
Sbjct: 170 ILDLDNAPLPVFPPNEVVVGVITMEDVIEELLQEEILDETDEY 298
>CA801895
Length = 454
Score = 54.3 bits (129), Expect = 8e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +2
Query: 133 AGALELSEKTASDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVY 181
A A+E+ + D+ +PI TF++D+NSKLD E M +IL GH RVPVY
Sbjct: 305 AAAMEIDCRRGHDSYSPIESTFSLDVNSKLDWEAMGKILALGHRRVPVY 451
>CO979798
Length = 850
Score = 47.4 bits (111), Expect = 1e-05
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = -3
Query: 219 VPESMPLYDILNEFQKGHSHMAVVVRQCDKTK 250
VP MP YDILNEFQKG SHMA VVR K K
Sbjct: 773 VPSDMPXYDILNEFQKGSSHMAAVVRARVKEK 678
Score = 36.6 bits (83), Expect(2) = 0.001
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = -2
Query: 286 IQKWKSFPNTNKSNRGGSRSRKWSKNMYSDILEIDGSPLPNIPEEEEAVGIITMEDVIEE 345
I K+ P+ NKS G RS + +SD +E +E +G+IT+EDV EE
Sbjct: 555 IDKFSRPPSINKST-GLQRSDSRTNGSFSDNIE------------DEVIGVITLEDVFEE 415
Query: 346 LLQ 348
LLQ
Sbjct: 414 LLQ 406
Score = 22.7 bits (47), Expect(2) = 0.001
Identities = 8/15 (53%), Positives = 12/15 (79%)
Frame = -1
Query: 346 LLQEEIFDETDHHFE 360
++QEEI DETD + +
Sbjct: 319 MMQEEIVDETDEYVD 275
>TC214156 similar to UP|Q9FQF0 (Q9FQF0) Glutathione S-transferase GST 8 ,
partial (79%)
Length = 576
Score = 33.5 bits (75), Expect = 0.15
Identities = 24/97 (24%), Positives = 46/97 (46%)
Frame = +1
Query: 258 SNDSVKEVKVDIDGEKPLQEKVLKPKIPIQKWKSFPNTNKSNRGGSRSRKWSKNMYSDIL 317
SN K+V V I EKP+ E ++ + + WK+ P + +R WSK + I+
Sbjct: 190 SNPVHKKVPVFIHNEKPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIV 369
Query: 318 EIDGSPLPNIPEEEEAVGIITMEDVIEELLQEEIFDE 354
+ + + E+E ++ + + + L+ EI D+
Sbjct: 370 GAAWNAVFTVDEKEREKNVVETYEAL-QFLENEIKDK 477
>TC230388 UP|Q9FQF2 (Q9FQF2) Glutathione S-transferase GST 6 , complete
Length = 779
Score = 32.7 bits (73), Expect = 0.26
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 258 SNDSVKEVKVDIDGEKPLQEKVLKPKIPIQKWKSFPNTNKSNRGGSRSRKWSKNMYSDIL 317
SN K+V V I EKP+ E ++ + + WK+ P S +R WSK + I+
Sbjct: 184 SNPVYKKVPVFIHNEKPIAESLVIVEYIDETWKNNPILPSDPYQRSFARFWSKFIDDKIV 363
Query: 318 EIDGSPLPNIPEEEEAVGIITMEDVIEEL--LQEEIFDE 354
+ + E+E + E+ +E L L+ E+ D+
Sbjct: 364 GASWKSVFTVDEKEREKNV---EESLEALQFLENELQDK 471
>TC207810 homologue to UP|Q9LG18 (Q9LG18) F14J16.20, partial (14%)
Length = 749
Score = 32.7 bits (73), Expect = 0.26
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 334 VGIITMEDVIEELLQEEIFDETD 356
VGI+T+EDV+EE++ EIFDE D
Sbjct: 20 VGIVTLEDVVEEIV-GEIFDEND 85
>TC204303 UP|Q9FQF0 (Q9FQF0) Glutathione S-transferase GST 8 , complete
Length = 1075
Score = 30.4 bits (67), Expect = 1.3
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 258 SNDSVKEVKVDIDGEKPLQEKVLKPKIPIQKWKSFPNTNKSNRGGSRSRKWSKNMYSDIL 317
SN K+V V I EKP+ E ++ + + WK+ P + +R WSK + +
Sbjct: 235 SNPVHKKVPVFIHNEKPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKVF 414
Query: 318 EIDGSPLPNIPEEEEAVGIITMEDVIEEL--LQEEIFDE 354
G+ ++ +E +E+ IE L L+ EI D+
Sbjct: 415 ---GAAWKSVFTADEKEREKNVEEAIEALQFLENEIKDK 522
>TC225038 similar to UP|Q41025 (Q41025) Histone H1, partial (67%)
Length = 862
Score = 30.4 bits (67), Expect = 1.3
Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 18/199 (9%)
Frame = +2
Query: 124 LTHDETTIIAGALELSEKTASDAMTPISET-FAIDINSKL---------DRELMTEILEK 173
L+ ++ I++ A + K + + P+S FA+ I + + +T+ +E
Sbjct: 110 LSFNQAIIMSTASQPKAKKTASSKKPLSHPPFAVMIAEAIASLKERTGSSQYAITKYIEG 289
Query: 174 GHSRVPVYYEQ--------STNIIGLILIKNLLTIHPEDESPVKSVTIRRIPRVPESMPL 225
H +P Y++ S L+ +KN + P +PVK+ ++ P + P
Sbjct: 290 KHKELPATYKKLVLVHLKKSVAAGKLVKVKNSFKLAPTKPAPVKAAAPKK-PTKAATKPA 466
Query: 226 YDILNEFQKGHSHMAVVVRQCDKTKQPSSKNDSNDSVKEVKVDIDGEKPLQEKVLKPKIP 285
K + + T +P SK + + K+V +K + V KPK
Sbjct: 467 SKPKAATPKKKAVAKPKAKAAATTAKPKSK-PAKVAAKKVAAKPAKKKTPVKAVKKPKSV 643
Query: 286 IQKWKSFPNTNKSNRGGSR 304
++K KS + K + ++
Sbjct: 644 VKKPKSVKSPAKKTKAKAK 700
>BF068794
Length = 383
Score = 30.0 bits (66), Expect = 1.7
Identities = 20/59 (33%), Positives = 32/59 (53%), Gaps = 1/59 (1%)
Frame = -1
Query: 288 KWKSFPNTNKSNRGGSRS-RKWSKNMYSDILEIDGSPLPNIPEEEEAVGIITMEDVIEE 345
K++S N+ S+ G RS KW + L I G+ L + PE+EE + + T+ +EE
Sbjct: 326 KFESHSNSAMSSYGTQRSSEKWPSERFR--LPISGTVLGSEPEKEEELQLWTVVVTVEE 156
>TC214345 UP|Q9FQF0 (Q9FQF0) Glutathione S-transferase GST 8 , partial (48%)
Length = 487
Score = 29.3 bits (64), Expect = 2.9
Identities = 17/62 (27%), Positives = 31/62 (49%)
Frame = +1
Query: 258 SNDSVKEVKVDIDGEKPLQEKVLKPKIPIQKWKSFPNTNKSNRGGSRSRKWSKNMYSDIL 317
SN K+V V I EKP+ E ++ + + WK+ P + +R WSK + ++
Sbjct: 211 SNPVHKKVPVFIHNEKPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKVI 390
Query: 318 EI 319
++
Sbjct: 391 QL 396
>TC227896 similar to GB|AAO63329.1|28950811|BT005265 At5g21920 {Arabidopsis
thaliana;} , partial (44%)
Length = 1078
Score = 29.3 bits (64), Expect = 2.9
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 173 KGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESPVKSVTIRRIPRVPESMPLYDILNEF 232
+GH + + + + L L NL T HP+ +S + TI + +PE + L+ +L +
Sbjct: 759 QGHLVLMLNRTWESLFVPLCLFINLDTFHPDYDSSILGNTIFEL-MIPEILELWSLLLKA 935
Query: 233 QKGHSHMAVV 242
Q H +V
Sbjct: 936 QGSSFHSPIV 965
>TC225033 similar to UP|O65758 (O65758) Histone H1, partial (81%)
Length = 1228
Score = 28.9 bits (63), Expect = 3.8
Identities = 35/176 (19%), Positives = 65/176 (36%), Gaps = 17/176 (9%)
Frame = +1
Query: 139 SEKTASDAMTPISETFAIDINSKL---------DRELMTEILEKGHSRVP--------VY 181
++KTAS TFA+ I + + +T+ +E H +P V+
Sbjct: 538 AKKTASSKKPLSHPTFAVMIAEAIASLKERTGSSQYAITKFIEGKHKELPPTYKKLVLVH 717
Query: 182 YEQSTNIIGLILIKNLLTIHPEDESPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAV 241
++S L+ +KN + P +PVK+ + P + P ++ +
Sbjct: 718 LKKSVAAGKLVKVKNSFKLAPTKSAPVKAAAAPKKPTKAAAKPAAKPASKPKAAAPKKKA 897
Query: 242 VVRQCDKTKQPSSKNDSNDSVKEVKVDIDGEKPLQEKVLKPKIPIQKWKSFPNTNK 297
V + K K + + +K + V KPK ++K KS + K
Sbjct: 898 VAKPKAKAAATKPKAKPAKAAPKKVAAKPAKKTPVKAVKKPKSVVKKPKSVKSPAK 1065
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.138 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,860,584
Number of Sequences: 63676
Number of extensions: 214127
Number of successful extensions: 1280
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of query: 362
length of database: 12,639,632
effective HSP length: 98
effective length of query: 264
effective length of database: 6,399,384
effective search space: 1689437376
effective search space used: 1689437376
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC124214.17