Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC122729.4 - phase: 0 
         (113 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC225749 homologue to UP|Q8CGN9 (Q8CGN9) Histone protein Hist2h3...   185  2e-48
TC215237 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c...   185  2e-48
TC218355 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c...   185  2e-48
TC214469 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c...   185  2e-48
TC214488 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c...   185  2e-48
TC225748 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c...   185  2e-48
TC225752 UP|H3_PEA (P02300) Histone H3, partial (98%)                 185  2e-48
TC217752 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c...   185  2e-48
TC225747 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c...   185  2e-48
TC214482 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c...   185  2e-48
TC215233 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c...   185  2e-48
TC205707 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c...   185  2e-48
TC214467 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete         178  3e-46
TC214466 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete         178  3e-46
TC214464 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete         178  3e-46
TC214471 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete         178  3e-46
TC214463 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete         178  3e-46
TC214470 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete         178  3e-46
BE190464 PIR|A27501|HS histone H3.3 [validated] - human, complete     177  5e-46
BE190474 similar to PIR|A27501|HSH histone H3.3 [validated] - hu...   157  9e-40

>TC225749 homologue to UP|Q8CGN9 (Q8CGN9) Histone protein Hist2h3c1, partial
           (77%)
          Length = 686

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +2

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 143 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 322

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 323 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 478


>TC215237 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
          Length = 686

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +2

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 122 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 301

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 302 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 457


>TC218355 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
          Length = 652

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +2

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 149 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 328

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 329 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 484


>TC214469 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
          Length = 642

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +2

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 149 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 328

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 329 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 484


>TC214488 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
          Length = 692

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +2

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 137 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 316

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 317 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 472


>TC225748 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
          Length = 914

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +3

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 156 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 335

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 336 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 491


>TC225752 UP|H3_PEA (P02300) Histone H3, partial (98%)
          Length = 631

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +1

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 232 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 411

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 412 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 567


>TC217752 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
          Length = 710

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +3

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 135 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 314

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 315 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 470


>TC225747 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
          Length = 1486

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +2

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 146 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 325

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 326 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 481



 Score = 25.4 bits (54), Expect = 4.2
 Identities = 25/93 (26%), Positives = 38/93 (39%), Gaps = 18/93 (19%)
 Frame = -2

Query: 5    KSALATGG-----MKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTD 59
            KS+L  G      MKKP         L EIRKY+             +L+ EIAQ+FK +
Sbjct: 1461 KSSLLNGNTW*FFMKKPRSPPQARTWLSEIRKYR------------YQLLCEIAQNFKIN 1318

Query: 60   L-------------RFQISAVSALQEIAEACIV 79
            +               Q+  +S+L  +   C++
Sbjct: 1317 IIDRYLWSTIVL*KELQLLGISSLLSMKRYCLL 1219


>TC214482 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
          Length = 724

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +2

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 143 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 322

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 323 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 478


>TC215233 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
          Length = 707

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +3

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 138 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 317

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 318 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 473


>TC205707 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
          Length = 708

 Score =  185 bits (470), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 102/112 (90%)
 Frame = +1

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 148 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 327

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 328 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 483


>TC214467 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
          Length = 835

 Score =  178 bits (452), Expect = 3e-46
 Identities = 93/112 (83%), Positives = 99/112 (88%)
 Frame = +2

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA  TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 119 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 298

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ  AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 299 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454


>TC214466 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
          Length = 666

 Score =  178 bits (452), Expect = 3e-46
 Identities = 93/112 (83%), Positives = 99/112 (88%)
 Frame = +3

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA  TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 129 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 308

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ  AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 309 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 464


>TC214464 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
          Length = 805

 Score =  178 bits (452), Expect = 3e-46
 Identities = 93/112 (83%), Positives = 99/112 (88%)
 Frame = +1

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA  TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 124 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 303

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ  AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 304 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 459


>TC214471 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
          Length = 993

 Score =  178 bits (452), Expect = 3e-46
 Identities = 93/112 (83%), Positives = 99/112 (88%)
 Frame = +3

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA  TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 168 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 347

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ  AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 348 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 503


>TC214463 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
          Length = 814

 Score =  178 bits (452), Expect = 3e-46
 Identities = 93/112 (83%), Positives = 99/112 (88%)
 Frame = +2

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA  TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 173 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 352

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ  AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 353 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 508


>TC214470 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
          Length = 708

 Score =  178 bits (452), Expect = 3e-46
 Identities = 93/112 (83%), Positives = 99/112 (88%)
 Frame = +1

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA  TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 148 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 327

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ  AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 328 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 483


>BE190464 PIR|A27501|HS histone H3.3 [validated] - human, complete
          Length = 435

 Score =  177 bits (450), Expect = 5e-46
 Identities = 90/112 (80%), Positives = 101/112 (89%)
 Frame = +1

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A RKSA +TGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 100 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 279

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ +A+ ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 280 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 435


>BE190474 similar to PIR|A27501|HSH histone H3.3 [validated] - human, partial
           (91%)
          Length = 440

 Score =  157 bits (396), Expect = 9e-40
 Identities = 81/112 (72%), Positives = 92/112 (81%)
 Frame = +1

Query: 2   ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
           A  K AL   G+  PHR RPG V++REIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 100 AAPKIALYA*GVNNPHRDRPGAVSVREIRRYQKFTELLIRKLPFQRLVREIAQDFKTDLR 279

Query: 62  FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
           FQ +A+ ALQE +EA +VGLFED NLCAIHAKRVTI+P DI+LA RIR ERA
Sbjct: 280 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPNDIQLARRIRGERA 435


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.328    0.140    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,175,272
Number of Sequences: 63676
Number of extensions: 43273
Number of successful extensions: 277
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of query: 113
length of database: 12,639,632
effective HSP length: 89
effective length of query: 24
effective length of database: 6,972,468
effective search space: 167339232
effective search space used: 167339232
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 51 (24.3 bits)


Medicago: description of AC122729.4