
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122729.4 - phase: 0
(113 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225749 homologue to UP|Q8CGN9 (Q8CGN9) Histone protein Hist2h3... 185 2e-48
TC215237 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 185 2e-48
TC218355 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 185 2e-48
TC214469 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 185 2e-48
TC214488 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 185 2e-48
TC225748 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 185 2e-48
TC225752 UP|H3_PEA (P02300) Histone H3, partial (98%) 185 2e-48
TC217752 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 185 2e-48
TC225747 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 185 2e-48
TC214482 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 185 2e-48
TC215233 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 185 2e-48
TC205707 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, c... 185 2e-48
TC214467 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 178 3e-46
TC214466 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 178 3e-46
TC214464 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 178 3e-46
TC214471 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 178 3e-46
TC214463 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 178 3e-46
TC214470 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete 178 3e-46
BE190464 PIR|A27501|HS histone H3.3 [validated] - human, complete 177 5e-46
BE190474 similar to PIR|A27501|HSH histone H3.3 [validated] - hu... 157 9e-40
>TC225749 homologue to UP|Q8CGN9 (Q8CGN9) Histone protein Hist2h3c1, partial
(77%)
Length = 686
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +2
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 143 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 322
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 323 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 478
>TC215237 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 686
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +2
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 122 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 301
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 302 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 457
>TC218355 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 652
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +2
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 149 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 328
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 329 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 484
>TC214469 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 642
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +2
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 149 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 328
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 329 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 484
>TC214488 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 692
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +2
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 137 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 316
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 317 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 472
>TC225748 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 914
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +3
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 156 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 335
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 336 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 491
>TC225752 UP|H3_PEA (P02300) Histone H3, partial (98%)
Length = 631
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +1
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 232 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 411
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 412 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 567
>TC217752 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 710
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +3
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 135 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 314
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 315 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 470
>TC225747 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 1486
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +2
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 146 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 325
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 326 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 481
Score = 25.4 bits (54), Expect = 4.2
Identities = 25/93 (26%), Positives = 38/93 (39%), Gaps = 18/93 (19%)
Frame = -2
Query: 5 KSALATGG-----MKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTD 59
KS+L G MKKP L EIRKY+ +L+ EIAQ+FK +
Sbjct: 1461 KSSLLNGNTW*FFMKKPRSPPQARTWLSEIRKYR------------YQLLCEIAQNFKIN 1318
Query: 60 L-------------RFQISAVSALQEIAEACIV 79
+ Q+ +S+L + C++
Sbjct: 1317 IIDRYLWSTIVL*KELQLLGISSLLSMKRYCLL 1219
>TC214482 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 724
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +2
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 143 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 322
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 323 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 478
>TC215233 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 707
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +3
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 138 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 317
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 318 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 473
>TC205707 homologue to UP|Q6LBE8 (Q6LBE8) Histone H3.2 protein, complete
Length = 708
Score = 185 bits (470), Expect = 2e-48
Identities = 97/112 (86%), Positives = 102/112 (90%)
Frame = +1
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 148 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 327
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 328 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 483
>TC214467 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 835
Score = 178 bits (452), Expect = 3e-46
Identities = 93/112 (83%), Positives = 99/112 (88%)
Frame = +2
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 119 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 298
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 299 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
>TC214466 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 666
Score = 178 bits (452), Expect = 3e-46
Identities = 93/112 (83%), Positives = 99/112 (88%)
Frame = +3
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 129 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 308
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 309 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 464
>TC214464 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 805
Score = 178 bits (452), Expect = 3e-46
Identities = 93/112 (83%), Positives = 99/112 (88%)
Frame = +1
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 124 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 303
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 304 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 459
>TC214471 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 993
Score = 178 bits (452), Expect = 3e-46
Identities = 93/112 (83%), Positives = 99/112 (88%)
Frame = +3
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 168 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 347
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 348 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 503
>TC214463 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 814
Score = 178 bits (452), Expect = 3e-46
Identities = 93/112 (83%), Positives = 99/112 (88%)
Frame = +2
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 173 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 352
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 353 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 508
>TC214470 UP|Q6LB28 (Q6LB28) Histone H3 variant H3.3, complete
Length = 708
Score = 178 bits (452), Expect = 3e-46
Identities = 93/112 (83%), Positives = 99/112 (88%)
Frame = +1
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 148 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 327
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 328 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 483
>BE190464 PIR|A27501|HS histone H3.3 [validated] - human, complete
Length = 435
Score = 177 bits (450), Expect = 5e-46
Identities = 90/112 (80%), Positives = 101/112 (89%)
Frame = +1
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA +TGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 100 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 279
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ +A+ ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 280 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 435
>BE190474 similar to PIR|A27501|HSH histone H3.3 [validated] - human, partial
(91%)
Length = 440
Score = 157 bits (396), Expect = 9e-40
Identities = 81/112 (72%), Positives = 92/112 (81%)
Frame = +1
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A K AL G+ PHR RPG V++REIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 100 AAPKIALYA*GVNNPHRDRPGAVSVREIRRYQKFTELLIRKLPFQRLVREIAQDFKTDLR 279
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ +A+ ALQE +EA +VGLFED NLCAIHAKRVTI+P DI+LA RIR ERA
Sbjct: 280 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPNDIQLARRIRGERA 435
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.328 0.140 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,175,272
Number of Sequences: 63676
Number of extensions: 43273
Number of successful extensions: 277
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of query: 113
length of database: 12,639,632
effective HSP length: 89
effective length of query: 24
effective length of database: 6,972,468
effective search space: 167339232
effective search space used: 167339232
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 51 (24.3 bits)
Medicago: description of AC122729.4