TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC122169.6 + phase: 0 
         (622 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC229009 similar to UP|Q94BZ7 (Q94BZ7) AT3g10270/F14P13_13, part...   325  e-109
TC224461 similar to UP|Q94BZ7 (Q94BZ7) AT3g10270/F14P13_13, part...   306  2e-83
TC229008 similar to UP|Q94BZ7 (Q94BZ7) AT3g10270/F14P13_13, part...   112  6e-25
TC224147 similar to UP|Q9LS52 (Q9LS52) Gb|AAD39678.1, partial (37%)    30  2.4
TC217251 weakly similar to UP|DJB1_HUMAN (P25685) DnaJ homolog s...    29  5.5

>TC229009 similar to UP|Q94BZ7 (Q94BZ7) AT3g10270/F14P13_13, partial (30%)
          Length = 1122

 Score =  325 bits (833), Expect(2) = e-109
 Identities = 160/177 (90%), Positives = 170/177 (95%)
 Frame = +1

Query: 446 MYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFYRYQRA 505
           +YKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFF+RYQRA
Sbjct: 136 LYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRA 315

Query: 506 LFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKLKSSFAPNASYNMQRFKGLGEMMPLQ 565
           LFDEG IYVGVPPLYKV RGKQVHYCYD+ADLKKL+ SF PNASYNMQRFKGLGEMMPLQ
Sbjct: 316 LFDEGCIYVGVPPLYKVVRGKQVHYCYDDADLKKLQRSFPPNASYNMQRFKGLGEMMPLQ 495

Query: 566 LWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGARVDVRKELIQNAANMIDLDQLDI 622
           LWETTMDPE+RLLK+L VEDAAEANIVFSSLMG RVDVRKELI+N+A++IDL QLDI
Sbjct: 496 LWETTMDPERRLLKQLKVEDAAEANIVFSSLMGTRVDVRKELIRNSASLIDLHQLDI 666



 Score = 88.6 bits (218), Expect(2) = e-109
 Identities = 43/44 (97%), Positives = 44/44 (99%)
 Frame = +3

Query: 402 DCEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEAA 445
           +CEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEAA
Sbjct: 3   ECEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEAA 134


>TC224461 similar to UP|Q94BZ7 (Q94BZ7) AT3g10270/F14P13_13, partial (24%)
          Length = 526

 Score =  306 bits (783), Expect = 2e-83
 Identities = 145/174 (83%), Positives = 161/174 (92%)
 Frame = +3

Query: 75  AGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQTYSRGKPVTTLNCV 134
           AGGKFGG NSGYSVS GLHGVGLSVVNALSE+LE+TVWR+G+EY QTYSRGKPV+ L C+
Sbjct: 3   AGGKFGGANSGYSVS*GLHGVGLSVVNALSESLEITVWRDGMEYMQTYSRGKPVSILKCL 182

Query: 135 MLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNPKLTIALRKEDNDPE 194
           +LP E KD +GTR++FWPDKEVFTTAI+F++NTIAGRIRELAFLNPKLTI LRKEDNDPE
Sbjct: 183 VLPDERKDLRGTRVRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKLTITLRKEDNDPE 362

Query: 195 KVQSNEYFYAGGLAEYVQFLNTDKKAVHDVLSFRKEIDGITVDIALQWCEDAYS 248
           KVQ NEYFYAGGL EYV++LNTDKKA+HDVLSFRKE DGITVDIA QWCEDAYS
Sbjct: 363 KVQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKETDGITVDIAFQWCEDAYS 524


>TC229008 similar to UP|Q94BZ7 (Q94BZ7) AT3g10270/F14P13_13, partial (9%)
          Length = 653

 Score =  112 bits (279), Expect = 6e-25
 Identities = 56/64 (87%), Positives = 60/64 (93%)
 Frame = +3

Query: 559 GEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGARVDVRKELIQNAANMIDLD 618
           GEMMPLQLWETTMDPE+RLLK+L VEDAAEANIVFSSLMG RVD RKELI N+A+MIDLD
Sbjct: 3   GEMMPLQLWETTMDPERRLLKQLKVEDAAEANIVFSSLMGTRVDFRKELIGNSASMIDLD 182

Query: 619 QLDI 622
           QLDI
Sbjct: 183 QLDI 194


>TC224147 similar to UP|Q9LS52 (Q9LS52) Gb|AAD39678.1, partial (37%)
          Length = 816

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 19/69 (27%), Positives = 32/69 (45%), Gaps = 4/69 (5%)
 Frame = +3

Query: 528 VHYCYDEAD--LKKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRL--LKKLTV 583
           V Y +D+++  +   K    P   Y +Q+   + E  P+   +T MDP   +  ++  T 
Sbjct: 267 VRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVNEAAPMDQQKTGMDPAANVNAVRATTT 446

Query: 584 EDAAEANIV 592
           E AA  N V
Sbjct: 447 ETAANVNAV 473


>TC217251 weakly similar to UP|DJB1_HUMAN (P25685) DnaJ homolog subfamily B
            member 1 (Heat shock 40 kDa protein 1) (Heat shock
            protein 40) (HSP40) (DnaJ protein homolog 1) (HDJ-1),
            partial (21%)
          Length = 1669

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 27/97 (27%), Positives = 40/97 (40%)
 Frame = +2

Query: 240  LQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEH 299
            L  C+ +Y D ILG    + TVDG   +     +   T   + KK      KD     + 
Sbjct: 1145 LYTCKVSYIDAILGTTIKVPTVDGTVDLKIPAGTQPNTTLVMAKKGVPFLNKDNMRGDQL 1324

Query: 300  VREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQ 336
            VR      V V++P          RL N E RK++++
Sbjct: 1325 VR------VQVEIPK---------RLSNDE-RKLIEE 1387


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.317    0.136    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,670,079
Number of Sequences: 63676
Number of extensions: 282246
Number of successful extensions: 1185
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of query: 622
length of database: 12,639,632
effective HSP length: 103
effective length of query: 519
effective length of database: 6,081,004
effective search space: 3156041076
effective search space used: 3156041076
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)