BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122166.12 - phase: 0 /pseudo
(170 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC233392 107 2e-24
TC231841 107 2e-24
TC211809 102 1e-22
CO984521 95 1e-20
CD396188 weakly similar to GP|6175788|gb|A ORF144 {Xestia c-nigr... 94 4e-20
TC222789 93 7e-20
CO979823 91 3e-19
TC233956 91 3e-19
TC222857 89 8e-19
TC213061 87 3e-18
CA851073 86 7e-18
TC222557 82 1e-16
CO986021 82 2e-16
TC231904 similar to GB|AAL25568.1|16648753|AY058152 AT5g16150/T2... 80 6e-16
TC233056 79 8e-16
BQ629929 79 1e-15
AW595917 76 7e-15
TC210600 similar to UP|Q51534 (Q51534) PilW protein, partial (7%) 76 7e-15
TC210729 similar to UP|Q7QHL7 (Q7QHL7) AgCP7056 (Fragment), part... 74 3e-14
TC213899 72 1e-13
>TC233392
Length = 1145
Score = 107 bits (268), Expect = 2e-24
Identities = 59/162 (36%), Positives = 84/162 (51%)
Frame = -1
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W +++P K S+FAWRL+RDRLPTKSNL R V+ E LC E A H+FL C+
Sbjct: 545 LWKLKIPAKASIFAWRLIRDRLPTKSNLHRRQVV-LEDSLCPFCRIREEDASHIFLECNK 369
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
LW + W+ +GV HF+Q VH T GSK + + W+ W LW RN
Sbjct: 368 IRPLWWESQTWVRSLGVSPINKRQHFLQHVHGTPGSKRYNRW-KTWWIALTWSLWKHRNQ 192
Query: 122 MCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
+ F ++ +LL+ +L W++ + F W SN
Sbjct: 191 VIFQNAQFNGIKLLEDAVFLHWTWIRAMEKDFSMHYNQWSSN 66
>TC231841
Length = 791
Score = 107 bits (268), Expect = 2e-24
Identities = 59/163 (36%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = +3
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W +++P K+++FAWRL+RDRLPT+SNL R I + C ESA HLF CS
Sbjct: 174 LWKLKLPSKITIFAWRLIRDRLPTRSNL-RRKQIEVDDPRCPFCRSAEESAAHLFFHCSR 350
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHS-TGGSKASQSFLQLIWLLCAWVLWTERN 120
A +W W+ +GV N HF+Q ++ T G +AS+ + WL W +W +RN
Sbjct: 351 IAPVWWESLSWVNLLGVFPNHPRQHFLQHIYGVTAGMRASR--WKWWWLALTWTIWKQRN 524
Query: 121 NMCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
NM F++ ++LD+ +L WL + F W SN
Sbjct: 525 NMIFSNGTFNANKILDEAIFLIWTWLTHLEKDFSIHYNQWSSN 653
>TC211809
Length = 895
Score = 102 bits (253), Expect = 1e-22
Identities = 55/167 (32%), Positives = 90/167 (52%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGV--IPSEAGLCVSG*GVLESAQHLFLSC 59
+W++++P K VFAWRL++DRLPT +NL R V S LC S E A HLF C
Sbjct: 281 LWNLKIPSKAIVFAWRLIKDRLPTWTNLRVRQVELNDSRCPLCNSS---EEDAAHLFFHC 451
Query: 60 SYFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTER 119
+ LW + W+ +G + DHF+Q + + G ++ + + +W+ WV+W R
Sbjct: 452 TKTEXLWWETQSWVNSLGAFPHNPKDHFLQHDNRSAGGVXARRW-KCLWVALTWVIWKHR 628
Query: 120 NNMCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSNPLQ 166
N + F++ ++++ L+ WLK + F G FS+WS+ L+
Sbjct: 629 NGVVFHNHSFDGSKVMEDAILLTWSWLKVMEKGFT-GPFSFWSSHLK 766
>CO984521
Length = 716
Score = 95.1 bits (235), Expect = 1e-20
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Frame = -2
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W ++VPLKV++FAWRL++D+LPTK+NL + V E LC V E+A HLF CS
Sbjct: 535 LWKLRVPLKVAIFAWRLIQDKLPTKANLRKKRVELQEY-LCPLCRSVEETASHLFFHCSK 359
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQ-SFLQLIWLLCAWVLWTERN 120
+ LW + W+ +GV HF Q H G S Q Q W + +W RN
Sbjct: 358 VSPLWWESQSWVNMMGVFPYQPDQHFSQ--HIFGASVGLQGKRWQWWWFALTYSIWKHRN 185
Query: 121 NMCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
++ F+++ +L+D ++ WL+ + F W SN
Sbjct: 184 SIIFSNANFDAHKLMDDAVFILWTWLRCFEKDFSLHFNQWSSN 56
>CD396188 weakly similar to GP|6175788|gb|A ORF144 {Xestia c-nigrum
granulovirus}, partial (5%)
Length = 701
Score = 93.6 bits (231), Expect = 4e-20
Identities = 55/162 (33%), Positives = 82/162 (49%)
Frame = -1
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W I++P FAWRLL DRLP+K NL+ R ++ + LC +ESA HLF +C
Sbjct: 626 LWEIKIPPTALSFAWRLLWDRLPSKENLIRRQIV-LQNDLCPFCQSQVESASHLFFTCHK 450
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
LW W+ V + D+F+Q S GS+ S ++ W+ +W RN+
Sbjct: 449 VMPLWWEFNTWVREDRVLHSKPMDNFLQHC-SLAGSRNSNRRRKIWWIAATRSIWNLRND 273
Query: 122 MCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
M FN+ I +L+DK +L+ WL+ + F W SN
Sbjct: 272 MIFNNQPFDISKLVDKAIFLTWSWLRGWEKDFNVPFHQWSSN 147
>TC222789
Length = 954
Score = 92.8 bits (229), Expect = 7e-20
Identities = 55/163 (33%), Positives = 77/163 (46%), Gaps = 1/163 (0%)
Frame = +2
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W ++VP+K VFAWRLLRDRLPTK NL +R I C V E A HLF CS
Sbjct: 362 LWKLKVPIKYEVFAWRLLRDRLPTKVNL-HRRQIQVMDRSCPFCRNVEEDAGHLFFHCSK 538
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQF-VHSTGGSKASQSFLQLIWLLCAWVLWTERN 120
+W W+ G HF+Q + GG + ++ + WL W +W +RN
Sbjct: 539 IIPIWWESLSWVNISGALPKDPRQHFLQHDLIMAGGIRTTR--WKCWWLAVTWTIWQQRN 712
Query: 121 NMCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
+ F + +L+D+ +L WL + F W SN
Sbjct: 713 KIIFFNDSFDANKLIDEAAFLLWTWLSNLEKDFSVNFNQWSSN 841
>CO979823
Length = 853
Score = 90.5 bits (223), Expect = 3e-19
Identities = 51/165 (30%), Positives = 80/165 (47%)
Frame = -2
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
IW +++P K +VFAWRL+RDRLPTKSNL R V+ + +C + E A HLF +C+
Sbjct: 591 IWKLKIPTKAAVFAWRLVRDRLPTKSNLRRRQVMVQDM-VCPLCNNIEEGAAHLFFNCTK 415
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
LW W+ HF+Q+ S+ + + W+ W +W RN
Sbjct: 414 TLPLWWESMSWVNLKTAMPQTPRQHFLQYGTDIADGLKSKRW-KCWWIALTWTIWQHRNK 238
Query: 122 MCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSNPLQ 166
+ F ++ ++L+ L W K + F F+ WS+ L+
Sbjct: 237 VVFQNATFHGNKVLEDALLLLWSWFKALEKDFNL-HFNQWSSGLR 106
>TC233956
Length = 757
Score = 90.5 bits (223), Expect = 3e-19
Identities = 56/162 (34%), Positives = 79/162 (48%)
Frame = +2
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W I+VP K F WRLL DRLPTK NL+ R I E LC E+A HLF +C
Sbjct: 170 LWEIKVPPKALSFVWRLLWDRLPTKDNLIKR-QIQVEDDLCPFCHSQSETASHLFFTCGK 346
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
LW W+ V D+F+Q +S+ SK S + + W+ +W RN+
Sbjct: 347 IMPLWWEFLSWVKEDKVFHCRPMDNFLQH-YSSAASKVSNTRRTMWWIAVTNSIWRLRND 523
Query: 122 MCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
+ F + + I RL D +L WL+ + +F + W SN
Sbjct: 524 IIFQNQTVDITRLTDSTLFLLWTWLRGWERNFQIPYYCWSSN 649
>TC222857
Length = 657
Score = 89.4 bits (220), Expect = 8e-19
Identities = 53/162 (32%), Positives = 81/162 (49%)
Frame = -3
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W I++P K +FAWRLL DRLPTK+NL R V S+ C V E+A H+F+ C
Sbjct: 613 LWKIKIPSKFLMFAWRLLWDRLPTKANLRARQVQISDL-TCPFCRRVEETASHMFIHCIK 437
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
+W +WI G ++DHF+QF S+ + Q W+ W +W RN+
Sbjct: 436 TQPIWWETMNWINMQGPLPWSITDHFMQFSSLKEAGIRSRRW-QWWWMAVTWSIWQLRNS 260
Query: 122 MCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
+ F+++ +L++ +L WL + F W SN
Sbjct: 259 IVFSNATFDGNKLVEDASFLLWTWLHNLEKDFSLHFNQWSSN 134
>TC213061
Length = 823
Score = 87.4 bits (215), Expect = 3e-18
Identities = 50/162 (30%), Positives = 78/162 (47%)
Frame = +2
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W ++VP+KV++FAWRLL+D LPT+ NL + V E +C + ESA HLF CS
Sbjct: 239 LWKLKVPMKVTMFAWRLLKDILPTRDNLRRKRVELHEY-VCPLCRSMDESASHLFFHCSK 415
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
+W W+ VG + HF Q H + + WL W +W RN+
Sbjct: 416 ILPIWWESLSWVKLVGAFPHHPRHHFHQHSHEVYQGLQGNRW-KWWWLALTWTIWKHRND 592
Query: 122 MCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
+ F+++ +++D +L W + + F W SN
Sbjct: 593 IIFSNATFNAHKVMDDAVFLIWTWFRHLENDFTSHYNQWSSN 718
>CA851073
Length = 633
Score = 86.3 bits (212), Expect = 7e-18
Identities = 51/162 (31%), Positives = 78/162 (47%)
Frame = +1
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
IW +++P + +VF+WRL++DRLPT+ NL+ R V E + G E A HLF +C
Sbjct: 139 IWKLKIPPRAAVFSWRLIKDRLPTRHNLLRRNVSIQENECPLCG-YEQEEADHLFFNCKM 315
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
LW W VG + + HFVQF G + + W+ +W RN
Sbjct: 316 TRGLWWESMRWNQIVGPLSVSPASHFVQFCDGFGAGRNHTRWCGW-WIALTSSIWKHRNL 492
Query: 122 MCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
+ F + +++D +L+ WLK R+ +F W SN
Sbjct: 493 LIFQGNQFEPSKVMDDALFLAWSWLKVREKNFNTPFNHWSSN 618
>TC222557
Length = 1002
Score = 82.4 bits (202), Expect = 1e-16
Identities = 47/164 (28%), Positives = 81/164 (48%)
Frame = +1
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W +++PLK + FAWRL+++R+PTK NL +R + +C E A HLF +C
Sbjct: 439 LWQLKIPLKATTFAWRLIKERIPTKGNL-WRRRVQLNNLMCPFCNRQEEEASHLFFNCPR 615
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
LW W VGV + + +++Q + G K Q+ + W+ W +W RN
Sbjct: 616 ILPLWWESLAWTKTVGVFSPIPRQNYMQHTLISKG-KHLQARWKCWWVALTWSIWRHRNR 792
Query: 122 MCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSNPL 165
+ F + +L+D +L W + + F +++WS+ L
Sbjct: 793 IVFLNKAFNGSKLMDDAIFLVWSWFRQLEKGFA-QPYNYWSSNL 921
>CO986021
Length = 900
Score = 81.6 bits (200), Expect = 2e-16
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Frame = -1
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCS 60
++W +++P + +F+WRL RDRL ++NL+ R V + +C E A HLF C
Sbjct: 675 ILWKLKIPPRAELFSWRLFRDRLSIRANLLRRHVALQDI-MCPLCGNHQEEAGHLFFHCR 499
Query: 61 YFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTG-GSKASQSFLQLIWLLCAWVLWTER 119
LW +W +G + + HF+QF S G G++ + + L W+ +W R
Sbjct: 498 MTIGLWWESMNWTRTLGAFLDDPAAHFIQF--SDGFGAQRNHNRRCLWWIALTSTIWQHR 325
Query: 120 NNMCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSNPLQCLG 169
N++ F + P+++D + + WLK + F W +N L+ G
Sbjct: 324 NSLLFKGTPFQPPKVMDDALFHAWTWLKATEKGFNIPFNQWSTNLLESFG 175
>TC231904 similar to GB|AAL25568.1|16648753|AY058152 AT5g16150/T21H19_70
{Arabidopsis thaliana;} , partial (17%)
Length = 903
Score = 79.7 bits (195), Expect = 6e-16
Identities = 50/154 (32%), Positives = 79/154 (50%)
Frame = +1
Query: 12 SVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSYFALLWSLVRD 71
++ AWRL+RDRLPTKSNL R + S++ LC E+A HLF CS LW +
Sbjct: 271 TIVAWRLIRDRLPTKSNLRRRQIDISDS-LCPFCSIKDETASHLFFECSKIQHLWWESQS 447
Query: 72 WIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNNMCFNDSIIPI 131
WIG G HF+Q G K + + + W+ W +W +RN + F ++
Sbjct: 448 WIGTSGAYPINPRHHFLQHNIGMKGGKIYKRW-KCWWVALNWSIWQQRNKVIFMNAPFNG 624
Query: 132 PRLLDKVKYLSLGWLKTRKASFLFGTFSWWSNPL 165
+LL+ +++ W + + +F F++WS+ L
Sbjct: 625 SKLLEDALFVAWTWFRAMEENFTI-HFNFWSSNL 723
>TC233056
Length = 680
Score = 79.3 bits (194), Expect = 8e-16
Identities = 50/163 (30%), Positives = 77/163 (46%), Gaps = 1/163 (0%)
Frame = -1
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W +++P K +VFAWRL+RDRLPTK+NL R V+ +++ LC E A HLF + S
Sbjct: 659 LWKLKIPAKSAVFAWRLIRDRLPTKTNLRRRQVMLTDS-LCPFCRNKEEEATHLFFNYSN 483
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSF-LQLIWLLCAWVLWTERN 120
LW + DH++Q H G ++ + W+ +W RN
Sbjct: 482 ILPLWWESLS*VNLTTALPQNPRDHYLQ--HGIGNDHGKKAIRWKCWWIALTRTIWQHRN 309
Query: 121 NMCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
+ F ++ +LLD L W+K+ + F W SN
Sbjct: 308 KIVFQNASFDGSKLLDDAVLLIWTWVKSMEKDFAVHFNQWSSN 180
>BQ629929
Length = 437
Score = 78.6 bits (192), Expect = 1e-15
Identities = 49/141 (34%), Positives = 71/141 (49%)
Frame = +3
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W I+VP + FAWRLL DRLPTK NL+ R V+ E LC +ESA HLF +
Sbjct: 18 LWEIKVPPRALSFAWRLLWDRLPTKENLIRRQVV-IENDLCPFCQSQVESASHLFFTYKK 194
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
+W W+ V D+F+Q S GS+ S ++ W+ +W RN+
Sbjct: 195 VMPMW*EFNSWVKEDTVMHCRPGDNFLQH-FSLAGSRDSNRKWKIWWIAATTSIWNLRND 371
Query: 122 MCFNDSIIPIPRLLDKVKYLS 142
M F + I +L+D +L+
Sbjct: 372 MIFKNQPFVISKLVDNAIFLT 434
>AW595917
Length = 404
Score = 76.3 bits (186), Expect = 7e-15
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Frame = +1
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
+W +++P K +VF WRL++D+LPTK+NL R + LC E A HLF +CS
Sbjct: 7 LWKLKIPPKAAVFTWRLIKDQLPTKANL--RRQMEISDSLCPLCNNSKEDATHLFFNCSK 180
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQF-VHSTGGSKASQSFLQLIWLLCAWVLWTERN 120
W W+ VG L +HF+Q +T G+KA++ + W+ +W RN
Sbjct: 181 TLPFWWESLSWVKTVGAFPKDLREHFLQHNSGNTAGTKATR--*RCWWIALTRTIWQHRN 354
Query: 121 NMCFNDSIIPIPRLLD 136
+ F + +++D
Sbjct: 355 KLVFENQTFNASKVMD 402
>TC210600 similar to UP|Q51534 (Q51534) PilW protein, partial (7%)
Length = 1093
Score = 76.3 bits (186), Expect = 7e-15
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Frame = +3
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVI--PSEAGLCVSG*GVLESAQHLFLS 58
M W+I+ + A ++DRLPT++NL R V S LC S + E A HLF
Sbjct: 462 MTWNIKFDINEDN*A-EYIKDRLPTRTNLRVRQVELNDSRCPLCNS---LEEDAAHLFFP 629
Query: 59 CSYFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTE 118
C+ LW + WI +G + DHF+Q +S+ ++ + + W+ WV+W
Sbjct: 630 CTKTLPLWWETQSWINSLGAFPHNPKDHFLQHDNSSADGVRARRW-KCWWVALTWVIWKH 806
Query: 119 RNNMCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSNPLQ 166
RN + F++ +++D +L WLK + F FS WS+ L+
Sbjct: 807 RNGVVFHNHSFDGSKVMDDAIFLFWSWLKVMEKGFTV-PFSSWSSQLK 947
>TC210729 similar to UP|Q7QHL7 (Q7QHL7) AgCP7056 (Fragment), partial (5%)
Length = 727
Score = 74.3 bits (181), Expect = 3e-14
Identities = 46/159 (28%), Positives = 72/159 (44%)
Frame = +2
Query: 5 IQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSYFAL 64
I+VP K+++F WRL+RDRLPT+ L R V ++ C E+A HLF C+
Sbjct: 65 IKVPNKIAIFVWRLIRDRLPTRHKLQRRQVQVADMS-CPFCRVKEENAGHLFFHCTKIQP 241
Query: 65 LWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNNMCF 124
LW WI G +F Q + S + Q W+ W +W RN++ F
Sbjct: 242 LWWEAMSWINLKGAAPLTPKMNFNQHMGLQADGVRSNRW-QCWWMALTWSIWKTRNSIVF 418
Query: 125 NDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSWWSN 163
+++ +L + ++ WL+ + F W SN
Sbjct: 419 SNASFDANQLFEDAVFILWTWLRNYEKGFTEHFNHWSSN 535
>TC213899
Length = 497
Score = 72.4 bits (176), Expect = 1e-13
Identities = 41/103 (39%), Positives = 58/103 (55%), Gaps = 3/103 (2%)
Frame = +3
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGV--IPSEAGLCVSG*GVLESAQHLFLSC 59
+W ++VP K++ FAWRLL+DRLPT+ NL R + + S C V ESA HLF C
Sbjct: 69 LWKLKVP*KIAAFAWRLLKDRLPTRINL*KRQIEMVESSCPFCSL---VEESAGHLFFQC 239
Query: 60 SYFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHS-TGGSKASQ 101
S +W W+ VGV + HF+Q +H T G +A++
Sbjct: 240 SKIIQVWWESLSWVNLVGVFPHHPRRHFLQHIHEVTRGMRANR 368
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.331 0.143 0.497
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,446,528
Number of Sequences: 63676
Number of extensions: 195965
Number of successful extensions: 1442
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1382
length of query: 170
length of database: 12,639,632
effective HSP length: 90
effective length of query: 80
effective length of database: 6,908,792
effective search space: 552703360
effective search space used: 552703360
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)
Medicago: description of AC122166.12