BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122165.6 + phase: 0
(424 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC224199 similar to UP|Q6NKY5 (Q6NKY5) At1g55880, partial (46%) 369 e-102
BE555595 similar to GP|8778327|gb| F14J16.13 {Arabidopsis thalia... 212 3e-55
BQ080986 similar to GP|8778327|gb|A F14J16.13 {Arabidopsis thali... 147 7e-36
TC227211 UP|Q8W1A0 (Q8W1A0) Cysteine synthase, complete 146 2e-35
TC226709 similar to UP|CYSK_CITLA (Q43317) Cysteine synthase (B... 145 3e-35
TC216146 similar to UP|Q7Y256 (Q7Y256) Beta-cyanoalanine synthas... 137 1e-32
TC221992 homologue to UP|Q81J79 (Q81J79) Cysteine synthase , pa... 90 1e-29
TC220787 homologue to UP|O65747 (O65747) Cysteine synthase, O-ac... 110 1e-24
TC229951 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragm... 103 2e-22
TC204859 similar to UP|Q9FS26 (Q9FS26) Plastidic cysteine syntha... 96 3e-20
TC219764 similar to UP|CYSK_CITLA (Q43317) Cysteine synthase (B... 86 4e-17
TC204856 similar to UP|CYSL_ARATH (P47999) Cysteine synthase, ch... 84 1e-16
BE610004 81 1e-15
TC212759 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragm... 72 5e-13
TC231114 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragm... 69 3e-12
AW201485 68 7e-12
BQ741579 similar to GP|18252506|gb cysteine synthase {Glycine ma... 57 2e-08
BU548116 54 1e-07
BM309180 similar to GP|4996618|dbj| cysteine synthase {Arabidops... 48 7e-06
TC222049 similar to UP|Q9SXS7 (Q9SXS7) Cysteine synthase (AT5g2... 43 2e-04
>TC224199 similar to UP|Q6NKY5 (Q6NKY5) At1g55880, partial (46%)
Length = 726
Score = 369 bits (946), Expect = e-102
Identities = 178/194 (91%), Positives = 188/194 (96%)
Frame = +3
Query: 231 NFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCYLIDPPGSGL 290
NFRAHYEGTGPEIWEQTNG LDAFVAAAGTGGTVAGVSKFLQEKNPNIKC+L+DPPGSGL
Sbjct: 3 NFRAHYEGTGPEIWEQTNGKLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCFLLDPPGSGL 182
Query: 291 FNKVMRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGAFRGTDMEAVEMA 350
FNKV RGVMYTKEEAEGRRLKNPFDTITEGIGINR+T+NFA AKLDGAFRGTD EAVEM+
Sbjct: 183 FNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRITRNFAMAKLDGAFRGTDREAVEMS 362
Query: 351 RFLVKNDGLFLGSSSAMNCVGAVRIAQSIGPGHTIVTILCDSGMRHLSKFYNAEYLSQLG 410
RFL+KNDGLFLGSSSAMNCVGAVR+AQ+IG GHTIVTILCDSGMRHLSKFY+AEYLSQLG
Sbjct: 363 RFLLKNDGLFLGSSSAMNCVGAVRVAQAIGTGHTIVTILCDSGMRHLSKFYDAEYLSQLG 542
Query: 411 LTPKATGLEFLGIK 424
LTPKA GLEFLG+K
Sbjct: 543 LTPKAIGLEFLGVK 584
>BE555595 similar to GP|8778327|gb| F14J16.13 {Arabidopsis thaliana}, partial
(25%)
Length = 411
Score = 212 bits (539), Expect = 3e-55
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = +1
Query: 242 EIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCYLIDPPGSGLFNKVMRGVMYT 301
EIWEQTNG LDAFVAAAGTGGTVAGVSKFLQEKNPNIKC+L+DPPGSGLFNKV RGVMYT
Sbjct: 1 EIWEQTNGKLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCFLLDPPGSGLFNKVTRGVMYT 180
Query: 302 KEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGAFRGTDMEAVEMARFLV 354
KEEAEGRRLKNPFDTITEGIGINR+T+NFA AKLDGAFRGTD EAVEM+R L+
Sbjct: 181 KEEAEGRRLKNPFDTITEGIGINRITRNFAMAKLDGAFRGTDREAVEMSRLLL 339
>BQ080986 similar to GP|8778327|gb|A F14J16.13 {Arabidopsis thaliana},
partial (16%)
Length = 420
Score = 147 bits (372), Expect = 7e-36
Identities = 74/106 (69%), Positives = 87/106 (81%)
Frame = +2
Query: 1 MAPVAARNAGAVGVGTAIFVSLVVAYFFCDRLCNPSKKKKKKKSKNGIIDAIGNTPLIRI 60
MA VAAR+ G+VGVG IF+S+ + +F + KKK+ +K K G++DAIGNTPLIRI
Sbjct: 104 MAAVAARSTGSVGVGAVIFISVALTTYFISKK-KKKKKKESRKKKKGLVDAIGNTPLIRI 280
Query: 61 NSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRRGG 106
NSLS ATGC+ILGKCEFLNPGGSVKDRVAVQII+EALESGQLR GG
Sbjct: 281 NSLSAATGCQILGKCEFLNPGGSVKDRVAVQIIQEALESGQLRPGG 418
>TC227211 UP|Q8W1A0 (Q8W1A0) Cysteine synthase, complete
Length = 1256
Score = 146 bits (369), Expect = 2e-35
Identities = 107/353 (30%), Positives = 160/353 (45%), Gaps = 2/353 (0%)
Frame = +2
Query: 48 IIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRRG-G 106
+ + IG TPL+ +N L+D + K E + P SVKDR+ +I +A E G + G
Sbjct: 122 VTELIGKTPLVYLNKLADGCVARVAAKLELMEPCSSVKDRIGYSMIADAEEKGLITPGKS 301
Query: 107 IVTEGSAGSTAISIATVAPAYGCKCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKD 166
++ E ++G+T I +A +A A G K + +P ++E+ I+ A GA + P
Sbjct: 302 VLIEPTSGNTGIGLAFMAAARGYKLIITMPASMSLERRIILLAFGAELVLTDPA------ 463
Query: 167 HFVNIARRRASEANEFAFKHRKSQPKGTDSQQINGCKSDGHKHSTLFPNDCQGGFFADQF 226
KG + G + PN + QF
Sbjct: 464 -------------------------KG-----MKGAVQKAEEILAKTPN----AYILQQF 541
Query: 227 ENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCYLIDPP 286
EN AN + HYE TGPEIW+ ++G +DAFV+ GTGGT+ G K+L+E+NPNIK ++P
Sbjct: 542 ENPANPKVHYETTGPEIWKGSDGKIDAFVSGIGTGGTITGAGKYLKEQNPNIKLIGVEPV 721
Query: 287 GSGLFNKVMRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGAFRGTDMEA 346
S V+ G P +GIG + LD + + EA
Sbjct: 722 ES----PVLSG-------------GKPGPHKIQGIGAGFIPGVLEVNLLDEVIQISSDEA 850
Query: 347 VEMARFLVKNDGLFLGSSSAMNCVGAVRIA-QSIGPGHTIVTILCDSGMRHLS 398
+E A+ L +GLF+G SS A +IA + G IV + G R+LS
Sbjct: 851 IETAKLLALKEGLFVGISSGAAAAAAFQIAKRPENAGKLIVAVFPSFGERYLS 1009
>TC226709 similar to UP|CYSK_CITLA (Q43317) Cysteine synthase
(Beta-pyrazolylalanine synthase) (Beta-PA/CSase)
(L-mimosine synthase) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) (CSase) (OAS-TL) ,
complete
Length = 1350
Score = 145 bits (366), Expect = 3e-35
Identities = 103/361 (28%), Positives = 161/361 (44%), Gaps = 2/361 (0%)
Frame = +2
Query: 40 KKKKSKNGIIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALES 99
+K + + IG TPL+ +N + D ++ K E + P SVKDR+ +I +A E
Sbjct: 218 EKSNIAKDVTELIGKTPLVYLNHIVDGCVAKVAAKLEMMEPCSSVKDRIGYSMIVDAEEK 397
Query: 100 GQLRRG-GIVTEGSAGSTAISIATVAPAYGCKCHVVIPDDAAIEKSQIIEALGATVERVR 158
G + G ++ E ++G+T I +A +A A G K + +P ++E+ I+ A GA +
Sbjct: 398 GLITPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPSSMSLERRTILRAFGAELVLTD 577
Query: 159 PVSITHKDHFVNIARRRASEANEFAFKHRKSQPKGTDSQQINGCKSDGHKHSTLFPNDCQ 218
P KG + G + PN
Sbjct: 578 PA-------------------------------KG-----MKGAVQKAEEIRDKTPNS-- 643
Query: 219 GGFFADQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNI 278
+ QFEN AN + HYE TGPEIW+ ++G +DA V+ GTGGT+ G K+L+E+NP+I
Sbjct: 644 --YMLQQFENPANPKVHYETTGPEIWKGSSGKVDALVSGIGTGGTITGAGKYLKEQNPDI 817
Query: 279 KCYLIDPPGSGLFNKVMRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGA 338
K Y I+P S + + P +GIG + LD
Sbjct: 818 KLYGIEPVESPILSG-----------------GKPGPHKIQGIGAGFIPGVLDVDLLDEV 946
Query: 339 FRGTDMEAVEMARFLVKNDGLFLGSSSAMNCVGAVRIA-QSIGPGHTIVTILCDSGMRHL 397
+ + EA+E A+ L +GL +G SS A++IA + G I+ + G R+L
Sbjct: 947 VQISSEEAIETAKLLALKEGLLVGISSGAAAAAAIKIAKRPENAGKLIIAVFPSFGERYL 1126
Query: 398 S 398
S
Sbjct: 1127S 1129
>TC216146 similar to UP|Q7Y256 (Q7Y256) Beta-cyanoalanine synthase, partial
(96%)
Length = 1431
Score = 137 bits (344), Expect = 1e-32
Identities = 104/356 (29%), Positives = 156/356 (43%), Gaps = 2/356 (0%)
Frame = +1
Query: 45 KNGIIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRR 104
K + IG TPL+ +N +++ G + K E + P S+KDR A +I +A E +
Sbjct: 322 KKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIKDRPAYAMITDAEEKNLITP 501
Query: 105 GGI-VTEGSAGSTAISIATVAPAYGCKCHVVIPDDAAIEKSQIIEALGATVERVRPVSIT 163
G + E ++G+ IS+A +A G K + +P ++E+ + GA + P
Sbjct: 502 GKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRVFGAELILTDPA--- 672
Query: 164 HKDHFVNIARRRASEANEFAFKHRKSQPKGTDSQQINGCKSDGHKHSTLFPNDCQGGFFA 223
KG + G ++ PN
Sbjct: 673 ----------------------------KG-----MGGTVKKAYELLENTPN----AHML 741
Query: 224 DQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCYLI 283
QF N AN + H+E TGPEIWE TNG +D FV G+GGTV+GV ++L+ KNPN+K Y +
Sbjct: 742 QQFSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGV 921
Query: 284 DPPGSGLFNKVMRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGAFRGTD 343
+P S + N G P G+G + ++ +
Sbjct: 922 EPSESNVLNGGKPG---------------PHHITGNGVGFKPDILDM--DVMEKVLEVSS 1050
Query: 344 MEAVEMARFLVKNDGLFLGSSSAMNCVGAVRIAQ-SIGPGHTIVTILCDSGMRHLS 398
+AV MAR L +GL +G SS N V A+R+AQ G IVT+ G R+LS
Sbjct: 1051EDAVNMARVLALKEGLMVGISSGANTVAALRLAQLPENKGKLIVTVHPSFGERYLS 1218
>TC221992 homologue to UP|Q81J79 (Q81J79) Cysteine synthase , partial (91%)
Length = 893
Score = 90.1 bits (222), Expect(2) = 1e-29
Identities = 77/282 (27%), Positives = 117/282 (41%)
Frame = +1
Query: 98 ESGQLRRGGIVTEGSAGSTAISIATVAPAYGCKCHVVIPDDAAIEKSQIIEALGATVERV 157
+ G L+ G + E ++G+T I +A VA A G +V+P+ +IE+ ++ A GA +
Sbjct: 220 KKGLLKEGDTIIEPTSGNTGIGLAMVAAAKGYNAILVMPETMSIERRNLLRAYGAELV-- 393
Query: 158 RPVSITHKDHFVNIARRRASEANEFAFKHRKSQPKGTDSQQINGCKSDGHKHSTLFPNDC 217
+T + A R+A+E A +H
Sbjct: 394 ----LTPGPEGMGGAIRKATE---LAKEH------------------------------- 459
Query: 218 QGGFFADQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPN 277
G F QF+N +N H TGPEI EQ LDAF+A GTGGT+ G + L+E
Sbjct: 460 -GYFIPQQFKNQSNPEIHRLTTGPEIIEQMGDQLDAFIAGIGTGGTITGAGEVLKEAYEG 636
Query: 278 IKCYLIDPPGSGLFNKVMRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDG 337
IK Y ++P S V+ G P +GIG V + D
Sbjct: 637 IKIYAVEPADS----PVLSG-------------GKPGPHKIQGIGAGFVPETLDVEVYDE 765
Query: 338 AFRGTDMEAVEMARFLVKNDGLFLGSSSAMNCVGAVRIAQSI 379
+ +A E AR + K +G+ +G SS A +A+ +
Sbjct: 766 IIQLKTEQAFEYARRVAKEEGILVGISSGSVIYAATEVAKKL 891
Score = 58.2 bits (139), Expect(2) = 1e-29
Identities = 24/58 (41%), Positives = 42/58 (72%)
Frame = +3
Query: 48 IIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRRG 105
+ + IG TP++++N + ++ +I K EF+NPG SVKDR+A+ +IE+A + G ++RG
Sbjct: 69 VSELIGKTPIVKLNRIVESDSADIYLKLEFMNPGSSVKDRIALAMIEDAEKKGIVKRG 242
>TC220787 homologue to UP|O65747 (O65747) Cysteine synthase,
O-acetyl-L-serine (Thiol)-lyase (Fragment) , partial
(77%)
Length = 797
Score = 110 bits (275), Expect = 1e-24
Identities = 70/179 (39%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Frame = +3
Query: 221 FFADQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNIKC 280
+ QFEN AN + HYE TGPEIWE T G +DA V+ GTGGT+ G KFL+EKNPNIK
Sbjct: 84 YILQQFENPANPKVHYETTGPEIWEGTRGKVDALVSGIGTGGTITGAGKFLKEKNPNIKL 263
Query: 281 YLIDPPGSGLFNKVMRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGAFR 340
Y ++P S V+ G P +GIG V + +D +
Sbjct: 264 YGVEPVES----PVLSG-------------GKPGPHKIQGIGAGFVPGVLEVSLVDEVVQ 392
Query: 341 GTDMEAVEMARFLVKNDGLFLGSSSAMNCVGAVRIA-QSIGPGHTIVTILCDSGMRHLS 398
+ EA+E A+ L +GLF+G SS A++IA + G IV I G R+LS
Sbjct: 393 ISSDEAIETAKLLALQEGLFVGISSGAAAAAAIKIAKRPENAGKLIVVIFPSFGERYLS 569
>TC229951 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragment) ,
partial (59%)
Length = 832
Score = 103 bits (256), Expect = 2e-22
Identities = 63/179 (35%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Frame = +3
Query: 221 FFADQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNIKC 280
F QFEN AN + HYE TGPEIW + G +DA VA GTGGT+ G KFL+E+NP IK
Sbjct: 39 FMPHQFENPANPKIHYETTGPEIWTDSGGKVDALVAGIGTGGTITGAGKFLKERNPKIKV 218
Query: 281 YLIDPPGSGLFNKVMRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGAFR 340
Y ++P S + + P + +GIG V LD +
Sbjct: 219 YGVEPVESAVLSG-----------------GQPGGHLIQGIGAGIVPAVLDVNLLDEILQ 347
Query: 341 GTDMEAVEMARFLVKNDGLFLGSSSAMNCVGAVRIA-QSIGPGHTIVTILCDSGMRHLS 398
+ EA+E A+ L +GL +G SS A+++ + IV + SG R+LS
Sbjct: 348 VSSEEAIETAKLLALKEGLLVGISSGAAAAAAIKLGKRPENADKLIVVVFPSSGERYLS 524
>TC204859 similar to UP|Q9FS26 (Q9FS26) Plastidic cysteine synthase 1,
partial (63%)
Length = 1092
Score = 95.9 bits (237), Expect = 3e-20
Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Frame = +3
Query: 221 FFADQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNIKC 280
+ QF+N +N + HYE TGPEIWE T G +D VA GTGGTV+G +FL+++NP I+
Sbjct: 192 YMLQQFDNPSNPKVHYETTGPEIWEDTRGKIDILVAGIGTGGTVSGAGQFLKQQNPKIQV 371
Query: 281 YLIDPPGSGLFNKVMRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGAFR 340
++P L + ++ G P +GIG V +N + LD
Sbjct: 372 IGVEP----LESNILTG-------------GKPGPHKIQGIGAGFVPRNLDQDVLDEVIA 500
Query: 341 GTDMEAVEMARFLVKNDGLFLGSSSAMNCVGAVRIA-QSIGPGHTIVTILCDSGMRHLS 398
+ EAVE A+ L +GL +G SS A+++ + G I + G R+LS
Sbjct: 501 ISSDEAVETAKQLALQEGLLVGISSGAAAAAALKVGKRPENAGKLIGVVFPSFGERYLS 677
>TC219764 similar to UP|CYSK_CITLA (Q43317) Cysteine synthase
(Beta-pyrazolylalanine synthase) (Beta-PA/CSase)
(L-mimosine synthase) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) (CSase) (OAS-TL) ,
partial (42%)
Length = 750
Score = 85.5 bits (210), Expect = 4e-17
Identities = 50/136 (36%), Positives = 70/136 (50%), Gaps = 1/136 (0%)
Frame = +3
Query: 231 NFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCYLIDPPGSGL 290
N + HYE TGPEIW + G +DA VA GTGGT+ G +FL+E+NPN+K Y I+P S +
Sbjct: 3 NPKIHYETTGPEIWRDSGGKVDALVAGVGTGGTITGAGRFLKERNPNVKLYGIEPVESAV 182
Query: 291 FNKVMRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGAFRGTDMEAVEMA 350
+ P D + +GIG + LD + + EA+E A
Sbjct: 183 LSG-----------------GPPGDHLIQGIGNGLIPSVLDFNLLDEVIQISSEEAIETA 311
Query: 351 RFL-VKNDGLFLGSSS 365
+ L +K DG F+ S S
Sbjct: 312 KLLALKEDGNFIRSRS 359
>TC204856 similar to UP|CYSL_ARATH (P47999) Cysteine synthase, chloroplast
precursor (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL
B) (AtCS-B) (cpACS1) (At.OAS.7-4) , partial (49%)
Length = 857
Score = 84.0 bits (206), Expect = 1e-16
Identities = 57/206 (27%), Positives = 95/206 (45%), Gaps = 1/206 (0%)
Frame = +3
Query: 48 IIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRRG-G 106
+ IG TP++ +N++ + I K E + P SVKDR+ +I +A + G + G
Sbjct: 360 VTQLIGKTPMVYLNNIVKGSVANIAAKLEIMEPCCSVKDRIGFSMINDAEQRGAITPGKS 539
Query: 107 IVTEGSAGSTAISIATVAPAYGCKCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKD 166
I+ E ++G+T I +A +A + G K + +P ++E+ +++A GA + +T
Sbjct: 540 ILVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVLLKAFGA------ELVLTDAA 701
Query: 167 HFVNIARRRASEANEFAFKHRKSQPKGTDSQQINGCKSDGHKHSTLFPNDCQGGFFADQF 226
+N A ++A E KS P + QF
Sbjct: 702 KGMNGAVQKAEEI-------LKSTP---------------------------NAYMLQQF 779
Query: 227 ENLANFRAHYEGTGPEIWEQTNGNLD 252
+N +N + HYE TGPEIWE T G +D
Sbjct: 780 DNPSNPKIHYETTGPEIWEDTRGKID 857
>BE610004
Length = 373
Score = 80.9 bits (198), Expect = 1e-15
Identities = 34/59 (57%), Positives = 45/59 (75%)
Frame = +2
Query: 221 FFADQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNIK 279
+ QFEN AN + HYE TGPEIW+ ++G +DAFV+ GTGGT+ G K+L+E+NPNIK
Sbjct: 194 YILQQFENPANPKVHYETTGPEIWKGSDGKIDAFVSGIGTGGTITGAGKYLKEQNPNIK 370
>TC212759 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragment) ,
partial (42%)
Length = 464
Score = 72.0 bits (175), Expect = 5e-13
Identities = 39/116 (33%), Positives = 65/116 (55%), Gaps = 1/116 (0%)
Frame = +3
Query: 45 KNGIIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRR 104
K + IGNTP++ +N++ D I K E++ SVKDR+A+ +IE+A + G +
Sbjct: 63 KKDATELIGNTPMVYLNNIVDGCVARIAAKLEYMQACCSVKDRIALSMIEDAEKKGLITP 242
Query: 105 G-GIVTEGSAGSTAISIATVAPAYGCKCHVVIPDDAAIEKSQIIEALGATVERVRP 159
G ++ E ++G+T I +A +A G K V +P ++E+ I+ A GA V P
Sbjct: 243 GKTVLVEYTSGNTGIGLAFIAALRGYKLQVTMPSYVSLERKIILRAFGAEVYLTDP 410
>TC231114 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragment) ,
partial (45%)
Length = 459
Score = 69.3 bits (168), Expect = 3e-12
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Frame = +3
Query: 255 VAAAGTGGTVAGVSKFLQEKNPNIKCYLIDPPGSGLFNKVMRGVMYTKEEAEGRRLKNPF 314
VA GTGG++AG +FL+EKNP+IK Y ++P S + N P
Sbjct: 6 VAGIGTGGSIAGAGRFLREKNPDIKLYGVEPAESPVLNG-----------------GQPG 134
Query: 315 DTITEGIGINRVTKNFAEAKLDGAFRGTDMEAVEMARFLVKNDGLFLGSSSAMNCVGAVR 374
+ +GIG + K LD + + EA+E A+ L +GL +G SS A++
Sbjct: 135 KHLIQGIGAGIIPKVLDVNLLDEVIQVSSEEAIETAKLLALKEGLLMGISSGAAAAAAIK 314
Query: 375 IA-QSIGPGHTIVTILCDSGMRHLS 398
+ + G IV I G R+LS
Sbjct: 315 VGKRPENAGKLIVVIFPSFGERYLS 389
>AW201485
Length = 411
Score = 68.2 bits (165), Expect = 7e-12
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +1
Query: 33 CNPSKKKKKKKSKNGIIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQI 92
C PS + + K + + IGNTP++ +N++ + I K E + P S+KDR A +
Sbjct: 73 CRPSNMEPQCAIKKDVTELIGNTPMVYLNNIVEGCVARIAAKLESMQPCFSIKDRTAFSM 252
Query: 93 IEEALESGQLRRG-GIVTEGSAGSTAISIATVAPAYGCKCHVVIPDDAAIEK 143
I++A + G + G ++ E ++G+T I +A VA G K V +P ++E+
Sbjct: 253 IKDAEDKGLITPGKSVLVEATSGNTGIGMAFVATLKGYKVIVAMPASVSLER 408
>BQ741579 similar to GP|18252506|gb cysteine synthase {Glycine max}, partial
(30%)
Length = 452
Score = 57.0 bits (136), Expect = 2e-08
Identities = 29/80 (36%), Positives = 48/80 (59%), Gaps = 1/80 (1%)
Frame = +3
Query: 52 IGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRRG-GIVTE 110
IG TP++ +N ++D + + K E + P SVKDR+A +I +A + G + G I+ E
Sbjct: 198 IGKTPIVYLNKIADGSVARVAAKLELMEPCSSVKDRIAYSMIADAEKKGLITPGQSILIE 377
Query: 111 GSAGSTAISIATVAPAYGCK 130
++G+T I +A +A A G K
Sbjct: 378 PTSGNTGIGLAFLAAAKGYK 437
>BU548116
Length = 624
Score = 53.9 bits (128), Expect = 1e-07
Identities = 37/123 (30%), Positives = 58/123 (47%)
Frame = -2
Query: 255 VAAAGTGGTVAGVSKFLQEKNPNIKCYLIDPPGSGLFNKVMRGVMYTKEEAEGRRLKNPF 314
VA GTGGT GV +FL+++NP I+ ++P L + ++ G P
Sbjct: 623 VAGIGTGGTXXGVGQFLKQQNPKIQVIGVEP----LESNILTG-------------GKPG 495
Query: 315 DTITEGIGINRVTKNFAEAKLDGAFRGTDMEAVEMARFLVKNDGLFLGSSSAMNCVGAVR 374
+GIG V +N + LD + EAVE A+ L +GL +G SS A++
Sbjct: 494 PHKIQGIGAGFVPRNLDQDVLDEVIAISSDEAVETAKQLALQEGLLVGISSGAAAAAALK 315
Query: 375 IAQ 377
+ +
Sbjct: 314 VGK 306
>BM309180 similar to GP|4996618|dbj| cysteine synthase {Arabidopsis
thaliana}, partial (20%)
Length = 428
Score = 48.1 bits (113), Expect = 7e-06
Identities = 23/75 (30%), Positives = 42/75 (55%)
Frame = +2
Query: 45 KNGIIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRR 104
K + + IGNTP++ +N + + I K E + P SVKDR+A+ +I++A +
Sbjct: 14 KQDVTELIGNTPMVYLNKVVEGCVARIAAKLESMEPCSSVKDRLALSMIKDAEDK----- 178
Query: 105 GGIVTEGSAGSTAIS 119
G++T G G+ ++
Sbjct: 179 -GLITPGKVGNRTLA 220
>TC222049 similar to UP|Q9SXS7 (Q9SXS7) Cysteine synthase
(AT5g28020/F15F15_90) , partial (21%)
Length = 477
Score = 43.1 bits (100), Expect = 2e-04
Identities = 20/61 (32%), Positives = 34/61 (54%)
Frame = +1
Query: 45 KNGIIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRR 104
K + IGNTP++ +N++ + I K E + P S+KDR A +I++A + G +
Sbjct: 292 KKDATELIGNTPMVYLNNIVEGCMARIAAKLESMQPCFSIKDRTAFSMIKDAEDKGLITP 471
Query: 105 G 105
G
Sbjct: 472 G 474
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,764,789
Number of Sequences: 63676
Number of extensions: 222079
Number of successful extensions: 2009
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1930
length of query: 424
length of database: 12,639,632
effective HSP length: 100
effective length of query: 324
effective length of database: 6,272,032
effective search space: 2032138368
effective search space used: 2032138368
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC122165.6