
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122163.2 + phase: 0
(428 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC229743 298 3e-81
AW705311 277 6e-75
TC232297 234 7e-62
TC210527 130 9e-31
TC209670 118 6e-27
BG316062 93 2e-19
TC222540 similar to GB|AAP31936.1|30387541|BT006592 At4g22290 {A... 93 2e-19
BU965258 92 6e-19
TC231508 65 4e-11
BG352658 54 1e-07
TC205988 UP|PM1_SOYBN (Q01417) 18 kDa seed maturation protein, c... 37 0.017
TC207049 UP|Q01527 (Q01527) Maturation protein (Soybean seed mat... 36 0.038
TC217113 similar to UP|Q708X5 (Q708X5) Leucine rich repeat prote... 35 0.085
TC208731 33 0.19
TC221470 similar to GB|AAR24741.1|38603996|BT010963 At2g34600 {A... 33 0.25
TC211099 similar to UP|NR41_HUMAN (P22736) Orphan nuclear recept... 32 0.72
TC211133 weakly similar to UP|Q9BKV7 (Q9BKV7) Ppg3, partial (4%) 30 1.6
TC206339 weakly similar to UP|Q9LVB8 (Q9LVB8) HSR203J protein-li... 30 1.6
AW156741 similar to GP|14597792|em c_pp004075307r {Physcomitrell... 30 2.1
TC233356 similar to PIR|A86166|A86166 protein F21B7.6 [imported]... 30 2.1
>TC229743
Length = 962
Score = 298 bits (763), Expect = 3e-81
Identities = 133/220 (60%), Positives = 175/220 (79%)
Frame = +2
Query: 209 NCVLGRKGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSYQRIPRCVYVSSEL 268
N GR+ ++GFV YPD+ELR A +GQ+VKV+GVVTCG++PLESS+Q++PRCVY S+ L
Sbjct: 2 NTYWGRRSIMGFVAHYPDSELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRCVYTSTSL 181
Query: 269 YEYKGWGGKSAHPKHRCFTWGSRYSEKYIADFYISDFQTGLRALVKAGYGNKVAPFVKPT 328
YEY+GW K+A+P HR TWG R E+ + DFYISDFQ+GLRALVK G+G +V P+V +
Sbjct: 182 YEYRGWNSKAANPTHRRLTWGLRLLERRVVDFYISDFQSGLRALVKTGHGARVTPYVDDS 361
Query: 329 TVVDVTKENRELSPNFLGWLADRKLSTDDRIMRLKEGHIKEGSTVSVMGVVRRHENVLMI 388
+++V ELSP FL WL +R LS+DDRIMRL+EG+IKEGSTVSVMGVV+R+ENVLMI
Sbjct: 362 VLINVNPTKEELSPEFLRWLGERNLSSDDRIMRLEEGYIKEGSTVSVMGVVQRNENVLMI 541
Query: 389 VPPTEPVSTGCQWMRCLLPTGVEGLIITCEDNQNADVIAV 428
VPP +P++TGCQW +C+ P+ +EG+++ CED DVI V
Sbjct: 542 VPPPDPITTGCQWTKCIFPSSLEGIVLRCEDASKNDVIPV 661
>AW705311
Length = 444
Score = 277 bits (709), Expect = 6e-75
Identities = 130/147 (88%), Positives = 141/147 (95%)
Frame = +3
Query: 196 GGVIVPVLVLIIWNCVLGRKGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSY 255
G VIVPV+VLI WNCV GR+GLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSY
Sbjct: 3 GAVIVPVVVLIAWNCVWGRRGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSY 182
Query: 256 QRIPRCVYVSSELYEYKGWGGKSAHPKHRCFTWGSRYSEKYIADFYISDFQTGLRALVKA 315
QR+PRCVYVS+ELYEYKG GGKSA+ KHRCFTWGSRYSEKY+ADFY+SDFQ+GLRALVKA
Sbjct: 183 QRVPRCVYVSTELYEYKGLGGKSANSKHRCFTWGSRYSEKYVADFYVSDFQSGLRALVKA 362
Query: 316 GYGNKVAPFVKPTTVVDVTKENRELSP 342
GYG KVAPFV+PTTVVD+TK+NRELSP
Sbjct: 363 GYGAKVAPFVEPTTVVDITKDNRELSP 443
>TC232297
Length = 637
Score = 234 bits (596), Expect = 7e-62
Identities = 103/164 (62%), Positives = 134/164 (80%)
Frame = +1
Query: 265 SSELYEYKGWGGKSAHPKHRCFTWGSRYSEKYIADFYISDFQTGLRALVKAGYGNKVAPF 324
S+ LYEY+GW K+A+PKHR FTWG R +E+++ DFYISDFQ+GLRALVK GYG +V P+
Sbjct: 4 STSLYEYRGWDSKAANPKHRRFTWGLRAAERHVVDFYISDFQSGLRALVKTGYGARVTPY 183
Query: 325 VKPTTVVDVTKENRELSPNFLGWLADRKLSTDDRIMRLKEGHIKEGSTVSVMGVVRRHEN 384
V + V+DV N+++SP FL WL +RKLS+DDRIM+LKEG+IKEGSTVSVMGVV+R++N
Sbjct: 184 VDDSIVIDVNPANKDMSPEFLRWLGERKLSSDDRIMQLKEGYIKEGSTVSVMGVVQRNDN 363
Query: 385 VLMIVPPTEPVSTGCQWMRCLLPTGVEGLIITCEDNQNADVIAV 428
VLMIVPP EP++TGCQW +C+ P +EG+++ CED DVI V
Sbjct: 364 VLMIVPPPEPLTTGCQWAKCIFPASLEGIVLRCEDTSKIDVIPV 495
>TC210527
Length = 844
Score = 130 bits (328), Expect = 9e-31
Identities = 96/237 (40%), Positives = 123/237 (51%), Gaps = 51/237 (21%)
Frame = +1
Query: 1 MGTRIPSHQLSSGLYVSGRPEQPKERQPPTMASRSVPYTGGDPKKSGELGKMLDIPVLDP 60
MG+R PSHQLS+GLYVSGRPEQPKER PTM S ++PYTGGD KKSGELGKM DIP+
Sbjct: 148 MGSRFPSHQLSNGLYVSGRPEQPKER-TPTMTSVAMPYTGGDIKKSGELGKMFDIPMDAS 324
Query: 61 KSHPSSSSSQLSTGPARS-------------RPNSGQVGKNITGSG----TLSRKSTGSG 103
KS S QL+ P+R+ PN+ T SG +LS K T SG
Sbjct: 325 KSR---KSGQLNNAPSRTGSFAAAASHSGPILPNTAPRSIYTTSSGGMAASLSMKKTNSG 495
Query: 104 PI----------------------------ALQPTGLITSGPVGSGPVGASRR-SGQLEQ 134
P+ L TGLITSGP+ S GA R+ SG LE
Sbjct: 496 PLNKHGEPVKKSSGPQSGGVTRQNSGPIPHVLPTTGLITSGPLNSS--GAPRKVSGPLEF 669
Query: 135 SGSM---GKAVYGSAVTSLGEEVKVGFR--VSRSVVWVFMVVVAMCLLVGVFLMVAV 186
SGSM + A+T+L + + FR + ++W +++ M + G F++ AV
Sbjct: 670 SGSMKSHTSVTHNPAMTTLSLDDEYSFRRNFPKPILWSVILIFVMGFIAGAFILGAV 840
>TC209670
Length = 827
Score = 118 bits (295), Expect = 6e-27
Identities = 84/210 (40%), Positives = 112/210 (53%), Gaps = 51/210 (24%)
Frame = +2
Query: 1 MGTRIPSHQLSSGLYVSGRPEQPKERQPPTMASRSVPYTGGDPKKSGELGKMLDIPVLDP 60
MG+R PSHQLS+GLYVSGRPEQPKE+ PTM+S ++PYTGGD K+SGELGKM DIP+
Sbjct: 182 MGSRFPSHQLSNGLYVSGRPEQPKEK-TPTMSSVAMPYTGGDIKRSGELGKMFDIPMDGS 358
Query: 61 KSHPSS--------------------------------------SSSQLSTGPARSRPNS 82
KS S S+ +S + + NS
Sbjct: 359 KSRKSGPINNAPSRTGSFAGAASHSGPIMQNAAARSVYITSGNVSAGGMSASASMKKTNS 538
Query: 83 GQVGKN------ITG--SGTLSRKSTGSGPIALQPTGLITSGPVGSGPVGASRR-SGQLE 133
G + K+ +G SG ++R+++G P L TGLITSGP+ S GA R+ SGQL+
Sbjct: 539 GPLNKHGEPVKKSSGPQSGGVTRQNSGPIPPVLPTTGLITSGPLNSS--GAPRKVSGQLD 712
Query: 134 QSGSMGK----AVYGSAVTSLGEEVKVGFR 159
+GSM + AVT+L + + FR
Sbjct: 713 STGSMKSLSSFVAHNPAVTTLSLDDEYSFR 802
>BG316062
Length = 324
Score = 93.2 bits (230), Expect = 2e-19
Identities = 45/57 (78%), Positives = 51/57 (88%)
Frame = +2
Query: 1 MGTRIPSHQLSSGLYVSGRPEQPKERQPPTMASRSVPYTGGDPKKSGELGKMLDIPV 57
MG+R PSHQLS+GLYVSGRPEQPKER PTM+S ++PYTGGD KKSGELGKM DIP+
Sbjct: 140 MGSRFPSHQLSNGLYVSGRPEQPKER-TPTMSSVAMPYTGGDIKKSGELGKMFDIPM 307
>TC222540 similar to GB|AAP31936.1|30387541|BT006592 At4g22290 {Arabidopsis
thaliana;} , partial (12%)
Length = 600
Score = 93.2 bits (230), Expect = 2e-19
Identities = 43/55 (78%), Positives = 49/55 (88%)
Frame = +3
Query: 374 SVMGVVRRHENVLMIVPPTEPVSTGCQWMRCLLPTGVEGLIITCEDNQNADVIAV 428
SVMGVV+RH+NVLMIV EPVSTGCQW+RCLLPT VEG I+TC+D+QNADVI V
Sbjct: 3 SVMGVVQRHDNVLMIVXAAEPVSTGCQWIRCLLPTYVEGXILTCDDSQNADVIPV 167
>BU965258
Length = 449
Score = 91.7 bits (226), Expect = 6e-19
Identities = 45/55 (81%), Positives = 49/55 (88%)
Frame = +1
Query: 1 MGTRIPSHQLSSGLYVSGRPEQPKERQPPTMASRSVPYTGGDPKKSGELGKMLDI 55
MG+RIPSH+LS+GLYVSGRPEQPKER PTM S +VPYTGGD KKSGELGKM DI
Sbjct: 286 MGSRIPSHKLSNGLYVSGRPEQPKER-TPTMTSTAVPYTGGDIKKSGELGKMFDI 447
>TC231508
Length = 433
Score = 65.5 bits (158), Expect = 4e-11
Identities = 26/44 (59%), Positives = 33/44 (74%)
Frame = +3
Query: 385 VLMIVPPTEPVSTGCQWMRCLLPTGVEGLIITCEDNQNADVIAV 428
VLMIVPP EP++TGCQW +C+ P +EG+I+ CED DVI V
Sbjct: 54 VLMIVPPPEPLTTGCQWAKCIFPASLEGIILRCEDTSKIDVIPV 185
>BG352658
Length = 145
Score = 53.9 bits (128), Expect = 1e-07
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +2
Query: 4 RIPSHQLSSGLYVSGRPEQPKERQPPTMASRSVPYTGG 41
R PSHQLS+GLYVS PEQ KE + PTM+S ++PYTGG
Sbjct: 5 RFPSHQLSNGLYVSSPPEQAKE-ETPTMSSVAMPYTGG 115
>TC205988 UP|PM1_SOYBN (Q01417) 18 kDa seed maturation protein, complete
Length = 846
Score = 37.0 bits (84), Expect = 0.017
Identities = 32/124 (25%), Positives = 51/124 (40%), Gaps = 18/124 (14%)
Frame = +1
Query: 25 ERQPPTMASRSVPYTGGDPKKSGELGKMLDIPVLDPKSHPSSSSSQLSTGPARSRPNSGQ 84
E+ T+ ++ T DP + EL ++ ++ Q +T +S +G
Sbjct: 151 EKTKATVQEKAERMTARDPVQK-ELATQKKEAKMNQAELDKQAARQHNTAAKQSATTAGH 327
Query: 85 VGKNI----TGSGTLSRKSTGS--------------GPIALQPTGLITSGPVGSGPVGAS 126
+G TG+GT + +TG G QPTG +T G VGS P+G +
Sbjct: 328 MGHGHHTTGTGTGTATYSTTGEYGQPMGAHQTSAMPGHGTGQPTGHVTEGVVGSHPIGTN 507
Query: 127 RRSG 130
R G
Sbjct: 508 RGPG 519
>TC207049 UP|Q01527 (Q01527) Maturation protein (Soybean seed maturation
polypeptides), complete
Length = 759
Score = 35.8 bits (81), Expect = 0.038
Identities = 28/106 (26%), Positives = 47/106 (43%)
Frame = +1
Query: 25 ERQPPTMASRSVPYTGGDPKKSGELGKMLDIPVLDPKSHPSSSSSQLSTGPARSRPNSGQ 84
E+ T+ ++ T DP + EL + ++ Q +T A+ +G
Sbjct: 124 EKTKATVQEKAERMTARDPMQK-ELATQKKEAKMSQAELDKQAARQHNTA-AKQAATAGH 297
Query: 85 VGKNITGSGTLSRKSTGSGPIALQPTGLITSGPVGSGPVGASRRSG 130
+G+ + T + G+G QPTG +T G VGS P+G +R G
Sbjct: 298 MGQPMGTHQTSAMPGHGTG----QPTGHVTEGVVGSHPIGTNRGPG 423
>TC217113 similar to UP|Q708X5 (Q708X5) Leucine rich repeat protein
precursor, partial (96%)
Length = 1553
Score = 34.7 bits (78), Expect = 0.085
Identities = 26/76 (34%), Positives = 35/76 (45%), Gaps = 9/76 (11%)
Frame = +1
Query: 17 SGRPEQPKERQP------PTMASRSVPYTGGDPKKSGELGKMLD--IPVLDPKSHPSSSS 68
+G P+ P R+P P + R + P S +GK L P P+ PS+SS
Sbjct: 232 AGSPKTPSSRKPVAPAT*PENSQRRSAASTPSPPSSSLIGKTLPGRSPPASPRFPPSASS 411
Query: 69 SQLSTG-PARSRPNSG 83
+ T PARSRP G
Sbjct: 412 TS*GTSSPARSRPTWG 459
>TC208731
Length = 1075
Score = 33.5 bits (75), Expect = 0.19
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +1
Query: 43 PKKSGELGKMLDI----PVLDPKSHPSSSSSQLSTGPARSRPNSGQVGKNITGSGTLSRK 98
P K G G +L + P+ PKS SS S S P +S P K I +GTL +
Sbjct: 274 PVKKGVKGSVLHLQIHKPIKKPKSPESSRSPSASNSPPKSSPVLVSTRKRIVTNGTLEER 453
>TC221470 similar to GB|AAR24741.1|38603996|BT010963 At2g34600 {Arabidopsis
thaliana;} , partial (24%)
Length = 754
Score = 33.1 bits (74), Expect = 0.25
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 403 RCLLPTGVEGLIITCEDNQNADVIAV 428
+C+ P +EG+++ CED DVI V
Sbjct: 482 KCIFPASLEGIVLRCEDTSKIDVIPV 559
>TC211099 similar to UP|NR41_HUMAN (P22736) Orphan nuclear receptor NR4A1
(Orphan nuclear receptor HMR) (Early response protein
NAK1) (TR3 orphan receptor), partial (4%)
Length = 898
Score = 31.6 bits (70), Expect = 0.72
Identities = 29/107 (27%), Positives = 38/107 (35%)
Frame = +1
Query: 33 SRSVPYTGGDPKKSGELGKMLDIPVLDPKSHPSSSSSQLSTGPARSRPNSGQVGKNITGS 92
S+ P G P S E P + SSS+SQ + PA ++ + +
Sbjct: 313 SKPTPSRGSTPPPSSEHASTSSAATTLPGTTSSSSASQRTFSPATPPASASPSTPSAPSA 492
Query: 93 GTLSRKSTGSGPIALQPTGLITSGPVGSGPVGASRRSGQLEQSGSMG 139
TLS S PT P P A RSG + GS G
Sbjct: 493 TTLSAPCASSSATCSPPT------PTTPRPASAPSRSG-ARRGGSTG 612
>TC211133 weakly similar to UP|Q9BKV7 (Q9BKV7) Ppg3, partial (4%)
Length = 709
Score = 30.4 bits (67), Expect = 1.6
Identities = 30/109 (27%), Positives = 39/109 (35%), Gaps = 15/109 (13%)
Frame = +1
Query: 28 PPTMASRSVPYTGGDPKKSGELGKMLDIPVLDPKSHPSSSSSQLSTGPARSRPNSGQVGK 87
PPT A+ S P P P P S PSSSSS + P+ + P+
Sbjct: 184 PPTSATSSTPSPSSSP------------PSPSPTSSPSSSSSPSPSPPSSAAPDPAAASA 327
Query: 88 --------------NITGSGTLSRKSTGS-GPIALQPTGLITSGPVGSG 121
+ S KS S G AL+PT + T+ SG
Sbjct: 328 RDARASRRPWSSICRFSASAPPPPKSISSPGRAALRPTPITTASGPSSG 474
>TC206339 weakly similar to UP|Q9LVB8 (Q9LVB8) HSR203J protein-like protein,
partial (43%)
Length = 1255
Score = 30.4 bits (67), Expect = 1.6
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Frame = -2
Query: 63 HPSSSSSQLSTGPARSRPNSGQVGKNITGSGTLSRKSTGSGPIALQPTGLI-TSGPVGSG 121
HPSSS S +T P S N+ ++ITGS +T L P+ LI P
Sbjct: 936 HPSSSKSLTTTTPFSSNNNTKSFSRSITGSPPFPLTNT------LHPSSLIFPIFPTHFS 775
Query: 122 PVGASRRSGQLEQSGSMGKAVYGSAVTSLGEEVKVGFRVSRSVVWV 167
+G + +GS + +VT G S ++WV
Sbjct: 774 ALGLQYS*SRSTPTGSASS--HNKSVTHSGRTSSFSSLTSDLLLWV 643
>AW156741 similar to GP|14597792|em c_pp004075307r {Physcomitrella patens},
partial (34%)
Length = 411
Score = 30.0 bits (66), Expect = 2.1
Identities = 20/63 (31%), Positives = 28/63 (43%), Gaps = 2/63 (3%)
Frame = +1
Query: 60 PKSHPSSSSSQLSTGPARSRPNSGQV-GKNITGSGTLSRKSTG-SGPIALQPTGLITSGP 117
P P SSSS LST P P + + + S T+S ST P+ + P + P
Sbjct: 145 PPVRPRSSSSTLSTTPVPVSPTTTSLPPRAALASSTVSSTSTARPSPLTVSPVSTVALSP 324
Query: 118 VGS 120
+ S
Sbjct: 325 LSS 333
>TC233356 similar to PIR|A86166|A86166 protein F21B7.6 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(51%)
Length = 659
Score = 30.0 bits (66), Expect = 2.1
Identities = 24/86 (27%), Positives = 34/86 (38%), Gaps = 7/86 (8%)
Frame = +2
Query: 3 TRIPSHQLSSGLYVSGR--PEQPKERQPPTMASRSVPYTGGDPKKSGELGKMLDIPVLDP 60
T P+ L S GR P P P+ +S P+ + + VL P
Sbjct: 182 TATPTRSLRSTSATPGRALPASPAASTTPSASS---------PRSPSSPSSLAEYTVLSP 334
Query: 61 KSHP-----SSSSSQLSTGPARSRPN 81
K P SS+S ++ PA+ RPN
Sbjct: 335 KRSPI*RTSGSSASTATSSPAKFRPN 412
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.317 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,147,974
Number of Sequences: 63676
Number of extensions: 267125
Number of successful extensions: 1771
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1760
length of query: 428
length of database: 12,639,632
effective HSP length: 100
effective length of query: 328
effective length of database: 6,272,032
effective search space: 2057226496
effective search space used: 2057226496
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC122163.2