BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121245.10 - phase: 0
(300 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC204369 similar to GB|BAB09857.1|9759402|AB008268 phi-1-like pr... 510 e-145
TC217146 similar to UP|Q7Y0S8 (Q7Y0S8) Erg-1, partial (76%) 434 e-122
TC217145 similar to UP|Q7Y0S8 (Q7Y0S8) Erg-1, partial (69%) 417 e-117
TC204367 similar to UP|O82161 (O82161) Phi-1 protein, partial (85%) 374 e-104
TC206099 similar to UP|O82161 (O82161) Phi-1 protein, partial (85%) 350 6e-97
TC204372 similar to GB|BAB09857.1|9759402|AB008268 phi-1-like pr... 325 2e-89
TC204377 similar to UP|O82161 (O82161) Phi-1 protein, partial (76%) 304 3e-83
TC206098 similar to UP|O82161 (O82161) Phi-1 protein, partial (67%) 275 2e-74
TC204368 similar to UP|O82161 (O82161) Phi-1 protein, partial (66%) 249 8e-67
TC204375 similar to UP|O82161 (O82161) Phi-1 protein, partial (63%) 144 3e-63
TC230146 similar to UP|O82161 (O82161) Phi-1 protein, partial (43%) 236 7e-63
TC228873 similar to GB|BAB09857.1|9759402|AB008268 phi-1-like pr... 229 1e-60
CD415108 similar to GP|14190477|gb AT5g64260/MSJ1_10 {Arabidopsi... 198 3e-51
CA820241 similar to GP|14190477|gb| AT5g64260/MSJ1_10 {Arabidops... 180 6e-46
TC228874 similar to GB|BAB09857.1|9759402|AB008268 phi-1-like pr... 179 2e-45
AW152953 similar to GP|14190477|gb| AT5g64260/MSJ1_10 {Arabidops... 157 7e-39
TC224934 similar to UP|Q9SII5 (Q9SII5) Expressed protein (At2g17... 141 3e-34
TC204378 similar to GB|BAB09857.1|9759402|AB008268 phi-1-like pr... 135 2e-32
TC228529 similar to UP|Q93YZ5 (Q93YZ5) AT5g51550/K17N15_10, part... 132 2e-31
TC224906 similar to UP|Q9SII5 (Q9SII5) Expressed protein (At2g17... 128 3e-30
>TC204369 similar to GB|BAB09857.1|9759402|AB008268 phi-1-like protein
{Arabidopsis thaliana;} , partial (75%)
Length = 1276
Score = 510 bits (1313), Expect = e-145
Identities = 248/304 (81%), Positives = 268/304 (87%), Gaps = 4/304 (1%)
Frame = +3
Query: 1 MASNYYFAIVLSAVL-LLVLPTLSFGELVQEQPLVLKYHNGQLLKGKLTVNLIWYGTFTP 59
M NY A+ SAVL LL+ P L+ GELV+EQPLVLKYHNGQLLKG++TVNLIWYGTFTP
Sbjct: 81 MTLNYNIALAFSAVLTLLLFPLLTVGELVEEQPLVLKYHNGQLLKGRITVNLIWYGTFTP 260
Query: 60 IQRSIIVDFINSLSTT-GAALPSASAWWKTTEKYKVG--SSALTVGKQFLHPAYTLGKNL 116
IQRSIIVDFINSLS+ A LPS + WWKTTEKYKVG S AL VG QFLHPAYTLGKNL
Sbjct: 261 IQRSIIVDFINSLSSAPNAPLPSTATWWKTTEKYKVGGGSPALVVGMQFLHPAYTLGKNL 440
Query: 117 KGKDLLALATKFNELSSITVVLTAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNA 176
KG+DLLALA+KFNE++SITVVLTAKDV VEGFCMSRCGTHGS R ART YIWVGN+
Sbjct: 441 KGRDLLALASKFNEINSITVVLTAKDVAVEGFCMSRCGTHGSTRNVKSNARTAYIWVGNS 620
Query: 177 ETLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQGP 236
ET CPGQCAWPFHQPIYGPQTPPLV+PNGD GVDGMVINLATLLAGTVTNPFNNGYFQGP
Sbjct: 621 ETQCPGQCAWPFHQPIYGPQTPPLVSPNGDAGVDGMVINLATLLAGTVTNPFNNGYFQGP 800
Query: 237 AAAPLEAVTACTGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSAC 296
APLEAV+ACTGVFGSG+YPGY GRVLVD A+G+SYNAHGANGR+YL+PAMWDPQTS C
Sbjct: 801 PTAPLEAVSACTGVFGSGSYPGYPGRVLVDKATGASYNAHGANGRRYLVPAMWDPQTSTC 980
Query: 297 KTLV 300
KTLV
Sbjct: 981 KTLV 992
>TC217146 similar to UP|Q7Y0S8 (Q7Y0S8) Erg-1, partial (76%)
Length = 1026
Score = 434 bits (1117), Expect = e-122
Identities = 210/297 (70%), Positives = 244/297 (81%), Gaps = 1/297 (0%)
Frame = +3
Query: 5 YYFAIVLSAVLLLVLPTLSFGELVQEQPLVLKYHNGQLLKGKLTVNLIWYGTFTPIQRSI 64
YY A+V VLLL+ PT+ GE EQ LVL+YH G LLKG++TVNL+WYG+FTPIQRS
Sbjct: 24 YYLALVCCCVLLLLNPTV--GEQ-DEQNLVLQYHKGALLKGRITVNLLWYGSFTPIQRST 194
Query: 65 IVDFINSLSTT-GAALPSASAWWKTTEKYKVGSSALTVGKQFLHPAYTLGKNLKGKDLLA 123
IVDFI SLS++ GA LPS + WWKTTEKY GS+ L VGKQ L Y+LGK L G LL
Sbjct: 195 IVDFIKSLSSSPGAPLPSVAWWWKTTEKYNGGSTTLVVGKQILQQTYSLGKYLNGTQLLY 374
Query: 124 LATKFNELSSITVVLTAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAETLCPGQ 183
L+++FN+L++I VVLT+ DV V+GFC SRCGTHGS+ +G AR PY+WVGN+E CPGQ
Sbjct: 375 LSSRFNDLNAINVVLTSNDVGVDGFCRSRCGTHGSI---NGKARIPYMWVGNSEAQCPGQ 545
Query: 184 CAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQGPAAAPLEA 243
CAWPFHQP YGPQTPPLVAPN DVGVDGMVIN+ATLLAGTVTNPFN G++QGP APLEA
Sbjct: 546 CAWPFHQPAYGPQTPPLVAPNADVGVDGMVINIATLLAGTVTNPFNEGFYQGPPTAPLEA 725
Query: 244 VTACTGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSACKTLV 300
V+ACTG+FGSGAYPGY GRVL+D +G+SYNA+G NGRKYLLPAMWDPQTSACKT V
Sbjct: 726 VSACTGIFGSGAYPGYPGRVLLDKTTGASYNAYGGNGRKYLLPAMWDPQTSACKTQV 896
>TC217145 similar to UP|Q7Y0S8 (Q7Y0S8) Erg-1, partial (69%)
Length = 999
Score = 417 bits (1071), Expect = e-117
Identities = 197/289 (68%), Positives = 238/289 (82%), Gaps = 2/289 (0%)
Frame = +1
Query: 14 VLLLVLPTLSFGELVQEQPLVLKYHNGQLLKGKLTVNLIWYGTFTPIQRSIIVDFINSLS 73
+LLL+ P + G Q L+L YHNG LLKG +TVNL+WYG+FTPIQRSII+DFINSLS
Sbjct: 25 LLLLLNPHTTLGA----QNLMLPYHNGALLKGTITVNLLWYGSFTPIQRSIILDFINSLS 192
Query: 74 TT-GAALPSASAWWKTTEKYKVGSSALTVGKQFLHPAYTLGKNLKGKDLLALATKFNELS 132
+T GA LPS ++WWKTT+KY+ GS+ + +GKQ L Y+LG L G L++L+++F+ L+
Sbjct: 193 STAGAPLPSVASWWKTTDKYRGGSTTIVLGKQILEQTYSLGNYLNGTQLVSLSSRFDHLN 372
Query: 133 SITVVLTAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAETLCPGQCAWPFHQPI 192
+I VVLT+ DV V+GFC SRCGTHGS+ G AR PY+WVGN+E CPGQCAWPFHQP
Sbjct: 373 AINVVLTSSDVGVDGFCRSRCGTHGSITNGQK-ARIPYVWVGNSEAQCPGQCAWPFHQPA 549
Query: 193 YGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQGPAAAPLEAVTACTGVFG 252
YGPQ PPL+APNGDVG+DGMVIN+ATLLAGTVTNPFN G++QGP APLEAV+ACTG+FG
Sbjct: 550 YGPQAPPLIAPNGDVGLDGMVINVATLLAGTVTNPFNEGFYQGPPTAPLEAVSACTGIFG 729
Query: 253 SGAYPGYAGRVLVDGASGSSYNAHGA-NGRKYLLPAMWDPQTSACKTLV 300
SGAYPGY GRVLVD +G+SYN++GA NGRKYLLPAMWDPQTSACKT V
Sbjct: 730 SGAYPGYPGRVLVDKTTGASYNSYGAGNGRKYLLPAMWDPQTSACKTQV 876
>TC204367 similar to UP|O82161 (O82161) Phi-1 protein, partial (85%)
Length = 1317
Score = 374 bits (961), Expect = e-104
Identities = 190/324 (58%), Positives = 236/324 (72%), Gaps = 24/324 (7%)
Frame = +3
Query: 1 MASNYYFAIVLSAVLLLVLPTLSFG-----ELVQEQPLVLKYHNGQLLKGKLTVNLIWYG 55
MA+ + L +LL+ + LSF +LVQ+Q +L YHNG LL GK+ VNLIWYG
Sbjct: 87 MATLVLYQFFLKLLLLISVFQLSFAARRLNQLVQDQSQLLHYHNGPLLYGKIAVNLIWYG 266
Query: 56 TFTPIQRSIIVDFINSLSTTGA--ALPSASAWWKTTEKY--------KVGSS-ALTVGKQ 104
F P Q++II DF+ SLS+ + + PS + WWKTTEKY K SS +L++G Q
Sbjct: 267 HFKPSQKAIITDFVTSLSSPSSQSSQPSVATWWKTTEKYYHLSPKNKKAASSLSLSLGDQ 446
Query: 105 FLHPAYTLGKNLKGKDLLALATKFNELSSITVVLTAKDVNVEGFCMSRCGTHGS------ 158
FL ++LGK+L K+L+ LA+K + ++I VVLT+ DV VEGFCMSRCGTHGS
Sbjct: 447 FLDEGFSLGKSLTSKNLVELASKGGQRNAINVVLTSADVAVEGFCMSRCGTHGSSSSASH 626
Query: 159 VRRGSGGA--RTPYIWVGNAETLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINL 216
V++ + G + YIWVGN+ET CPGQCAWPFHQPIYGPQ+PPLVAPN DVG+DGMVINL
Sbjct: 627 VKKNNNGKNYKFAYIWVGNSETQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGLDGMVINL 806
Query: 217 ATLLAGTVTNPFNNGYFQGPAAAPLEAVTACTGVFGSGAYPGYAGRVLVDGASGSSYNAH 276
A+LLAGT TNPF NGYFQGPA APLEA +AC GV+G GAYPGYAG +LVD A+G+SYN
Sbjct: 807 ASLLAGTATNPFGNGYFQGPAEAPLEAASACPGVYGKGAYPGYAGNLLVDSATGASYNVE 986
Query: 277 GANGRKYLLPAMWDPQTSACKTLV 300
G NGRKYL+PA++DP TS+C T V
Sbjct: 987 GDNGRKYLVPALYDPSTSSCSTPV 1058
>TC206099 similar to UP|O82161 (O82161) Phi-1 protein, partial (85%)
Length = 1174
Score = 350 bits (897), Expect = 6e-97
Identities = 175/299 (58%), Positives = 211/299 (70%), Gaps = 9/299 (3%)
Frame = +3
Query: 10 VLSAVLLLVLPTLSFGELVQEQPLVLKYHNGQLLKGKLTVNLIWYGTFTPIQRSIIVDFI 69
++SA+ L E +Q L +YH G LL G ++VNLIWYG+F P QR+II DFI
Sbjct: 144 IVSALHLGAAAARILSEKEDQQQLQFQYHKGPLLSGNISVNLIWYGSFKPSQRAIISDFI 323
Query: 70 NSLSTT--GAALPSASAWWKTTEKY-------KVGSSALTVGKQFLHPAYTLGKNLKGKD 120
SLS++ A PS + WWK TEKY S L +G Q L Y+LGK+L +
Sbjct: 324 TSLSSSPKSTAQPSVATWWKGTEKYYQLIKSAPKPSLTLALGAQILDENYSLGKSLTTDN 503
Query: 121 LLALATKFNELSSITVVLTAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAETLC 180
+++LA+K +I VVLT DV VEGFC SRCGTHGS G + Y+WVGN+ET C
Sbjct: 504 IVSLASKGAPNDAINVVLTFSDVTVEGFCSSRCGTHGS---SVGHGKLAYVWVGNSETQC 674
Query: 181 PGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQGPAAAP 240
PGQCAWPFHQPIYGPQ+PPLVAPN DVG+DGMVIN+ATLLAGTVTNP+ NGYFQGP AP
Sbjct: 675 PGQCAWPFHQPIYGPQSPPLVAPNNDVGLDGMVINVATLLAGTVTNPWGNGYFQGPKEAP 854
Query: 241 LEAVTACTGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSACKTL 299
LEA +ACTGV+G GAYPGYAG +LVD + +SYNA+ N RKYLLPA++DP TSAC TL
Sbjct: 855 LEAASACTGVYGKGAYPGYAGELLVDPTTAASYNANAVNHRKYLLPALFDPTTSACSTL 1031
>TC204372 similar to GB|BAB09857.1|9759402|AB008268 phi-1-like protein
{Arabidopsis thaliana;} , partial (44%)
Length = 675
Score = 325 bits (833), Expect = 2e-89
Identities = 163/204 (79%), Positives = 174/204 (84%), Gaps = 3/204 (1%)
Frame = +2
Query: 1 MASNYYFAIVLSAVL-LLVLPTLSFGELVQEQPLVLKYHNGQLLKGKLTVNLIWYGTFTP 59
MA NY A+ S VL LL+LP + GELVQEQPLVLKYHNGQLLKG++TVNLIWYGTFTP
Sbjct: 62 MALNYNIALAFSTVLTLLLLPLPTLGELVQEQPLVLKYHNGQLLKGRITVNLIWYGTFTP 241
Query: 60 IQRSIIVDFINSLSTT-GAALPSASAWWKTTEKYKVG-SSALTVGKQFLHPAYTLGKNLK 117
IQRSIIVDFINSLS+ A LPS + WWKTTEKYK G SSAL VGKQFLH AY+LGKNLK
Sbjct: 242 IQRSIIVDFINSLSSAPNAPLPSTATWWKTTEKYKGGGSSALVVGKQFLHSAYSLGKNLK 421
Query: 118 GKDLLALATKFNELSSITVVLTAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAE 177
GKD+LALA+KFNEL SITVVLTAKDV VEGFCMSRCGTHGS R ART YIWVGN+E
Sbjct: 422 GKDVLALASKFNELKSITVVLTAKDVAVEGFCMSRCGTHGSTRNVKNAARTAYIWVGNSE 601
Query: 178 TLCPGQCAWPFHQPIYGPQTPPLV 201
T CPGQCAWPFHQPIYGPQTPPLV
Sbjct: 602 TQCPGQCAWPFHQPIYGPQTPPLV 673
>TC204377 similar to UP|O82161 (O82161) Phi-1 protein, partial (76%)
Length = 906
Score = 304 bits (779), Expect = 3e-83
Identities = 155/245 (63%), Positives = 183/245 (74%), Gaps = 13/245 (5%)
Frame = +2
Query: 69 INSLSTTG--AALPSASAWWKTTEKYKVGSS---ALTVGK-QFLHPAYTLGKNLKGKDLL 122
I SLS+ A PS + WWK T+KY SS AL++G Q L Y+LGK+L +L
Sbjct: 2 ITSLSSPKPVTAQPSVATWWKATDKYYKNSSPKLALSLGTTQILDENYSLGKSLTNNQIL 181
Query: 123 ALATKFNELSSITVVLTAKDVNVEGFCMSRCGTHGSVRRGSGGART-------PYIWVGN 175
LA+K + ++I +VLT+ DV VEGFC SRCGTHGS S GAR YIWVGN
Sbjct: 182 KLASKGPQRNAINIVLTSADVAVEGFCSSRCGTHGS----SVGARVNGKRYKLAYIWVGN 349
Query: 176 AETLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQG 235
+ET CPGQCAWPFHQPIYGPQ PPLVAPN DVG+DGM+IN+A+LLAGTVTNPF NGYFQG
Sbjct: 350 SETQCPGQCAWPFHQPIYGPQNPPLVAPNNDVGLDGMLINVASLLAGTVTNPFGNGYFQG 529
Query: 236 PAAAPLEAVTACTGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSA 295
P APLEA +ACTGV+G GAYPGYAG +L+D +G+SYNA+G NGRKYLLPA+ DP+TSA
Sbjct: 530 PKEAPLEAGSACTGVYGKGAYPGYAGNLLLDPTTGASYNANGVNGRKYLLPALVDPETSA 709
Query: 296 CKTLV 300
C TLV
Sbjct: 710 CSTLV 724
>TC206098 similar to UP|O82161 (O82161) Phi-1 protein, partial (67%)
Length = 807
Score = 275 bits (703), Expect = 2e-74
Identities = 146/252 (57%), Positives = 175/252 (68%), Gaps = 16/252 (6%)
Frame = +3
Query: 8 AIVLSAVLL---LVLPTLSFG-------ELVQEQPLVLKYHNGQLLKGKLTVNLIWYGTF 57
++V S+VLL L++ L G E Q+Q L +YH G LL GK++VNLIWYG F
Sbjct: 60 SLVSSSVLLHLFLIISALHLGAAARILSEKDQQQQLQFQYHKGPLLSGKISVNLIWYGNF 239
Query: 58 TPIQRSIIVDFINSLST-TGAALPSASAWWKTTEKYK--VGSS---ALTVGKQFLHPAYT 111
P QR+II DFI SLS+ A PS + WWK T+KY + SS LT+G Q L Y+
Sbjct: 240 KPSQRAIISDFITSLSSHKSTAQPSVATWWKGTQKYYQLIKSSPKLTLTLGTQILDENYS 419
Query: 112 LGKNLKGKDLLALATKFNELSSITVVLTAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYI 171
LGK+L ++++LA+K +I VVLT+ DV VEGFC SRCGTHGS G + Y+
Sbjct: 420 LGKSLTNDNIVSLASKGASKDAINVVLTSSDVTVEGFCSSRCGTHGS---SVGPRKFAYV 590
Query: 172 WVGNAETLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNG 231
WVGN+ET CPGQCAWPF QPIYGPQ PPLVAPN DVG+DGMVIN+ATLLAGTVTNPF NG
Sbjct: 591 WVGNSETQCPGQCAWPFQQPIYGPQNPPLVAPNNDVGLDGMVINVATLLAGTVTNPFGNG 770
Query: 232 YFQGPAAAPLEA 243
YFQGP APLEA
Sbjct: 771 YFQGPKEAPLEA 806
>TC204368 similar to UP|O82161 (O82161) Phi-1 protein, partial (66%)
Length = 799
Score = 249 bits (637), Expect = 8e-67
Identities = 132/238 (55%), Positives = 164/238 (68%), Gaps = 14/238 (5%)
Frame = +2
Query: 11 LSAVLLLVLPTLSFGELVQEQP-LVLKYHNGQLLKGKLTVNLIWYGTFTPIQRSIIVDFI 69
L L ++L S +L + P L +YH G LL GK++VNLIWYG F P Q++I+ DFI
Sbjct: 98 LFVTLSMILHLSSARKLSESDPQLQFQYHRGPLLTGKISVNLIWYGKFKPSQKAIVADFI 277
Query: 70 NSLSTTG--AALPSASAWWKTTEKYKVGSS---ALTVGKQFLHPAYTLGKNLKGKDLLAL 124
SLS++ A PS + WWK T+KY S AL++G Q + Y+LGK+L +L L
Sbjct: 278 TSLSSSKPLTAQPSVATWWKATDKYYKNSFPKLALSLGSQIVDENYSLGKSLTTNQILKL 457
Query: 125 ATKFNELSSITVVLTAKDVNVEGFCMSRCGTHGSVRRGSGGART-------PYIWVGNAE 177
A+K + ++I +VLT+ +V VEGFC SRCGTHGS S GAR Y+WVGN+E
Sbjct: 458 ASKGPQRNAINIVLTSAEVAVEGFCSSRCGTHGS----SVGARVNGKRYKFAYMWVGNSE 625
Query: 178 TLCPGQCAWPFHQPIYGPQTP-PLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQ 234
T CPGQCAWPFHQPIYGPQ P PLVAPN DVG+DGMVIN+A+LLAGTVTNPF NGYFQ
Sbjct: 626 TQCPGQCAWPFHQPIYGPQNPAPLVAPNNDVGLDGMVINVASLLAGTVTNPFGNGYFQ 799
>TC204375 similar to UP|O82161 (O82161) Phi-1 protein, partial (63%)
Length = 780
Score = 144 bits (364), Expect(2) = 3e-63
Identities = 67/98 (68%), Positives = 76/98 (77%), Gaps = 4/98 (4%)
Frame = +1
Query: 135 TVVLTAKDVNVEGFCMSRCGTHGS----VRRGSGGARTPYIWVGNAETLCPGQCAWPFHQ 190
TVVLT+ DV VEGFCMSRCGTHGS +++ S + YIWVGN+ET CPGQCAWPFHQ
Sbjct: 487 TVVLTSADVAVEGFCMSRCGTHGSSASHLKKNSKSYKFAYIWVGNSETQCPGQCAWPFHQ 666
Query: 191 PIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPF 228
PIYGPQ+PP VAPN DVG+DGM IN +LL T NPF
Sbjct: 667 PIYGPQSPPFVAPNNDVGLDGMFINPRSLLCRTRNNPF 780
Score = 115 bits (287), Expect(2) = 3e-63
Identities = 59/116 (50%), Positives = 81/116 (68%), Gaps = 7/116 (6%)
Frame = +3
Query: 26 ELVQEQPLVLKYHNGQLLKGKLTVNLIWYGTFTPIQRSIIVDFINSLST--TGAALPSAS 83
ELVQ+Q +L YHNG LL GK+ VNLIWYG F P Q++II DF+ SLS+ + ++ PS +
Sbjct: 138 ELVQDQSQLLHYHNGPLLYGKIAVNLIWYGNFKPSQKAIITDFVTSLSSPASQSSQPSVA 317
Query: 84 AWWKTTEKY-----KVGSSALTVGKQFLHPAYTLGKNLKGKDLLALATKFNELSSI 134
WWKTTEKY + S +L++G Q L Y+LGK+L GK+L+ LA+K + +SI
Sbjct: 318 TWWKTTEKYYHLSPRKASLSLSLGDQILDETYSLGKSLTGKNLVQLASKGGQRNSI 485
>TC230146 similar to UP|O82161 (O82161) Phi-1 protein, partial (43%)
Length = 564
Score = 236 bits (603), Expect = 7e-63
Identities = 104/131 (79%), Positives = 118/131 (89%)
Frame = +1
Query: 170 YIWVGNAETLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFN 229
YIWVGN+E CPGQCAWPFHQPIYGPQ+PPLVAPN DVG+DGMVINLA+LLAGTVTNPF
Sbjct: 10 YIWVGNSEAQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGIDGMVINLASLLAGTVTNPFG 189
Query: 230 NGYFQGPAAAPLEAVTACTGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMW 289
NG++QGPA APLEA TAC GV+G GAYPGYAG + VD ++G+SYNAHGANGRKYLLPA++
Sbjct: 190 NGFYQGPAEAPLEAATACPGVYGKGAYPGYAGNLNVDSSTGASYNAHGANGRKYLLPALY 369
Query: 290 DPQTSACKTLV 300
DP TS+C TLV
Sbjct: 370 DPATSSCSTLV 402
>TC228873 similar to GB|BAB09857.1|9759402|AB008268 phi-1-like protein
{Arabidopsis thaliana;} , partial (46%)
Length = 554
Score = 229 bits (584), Expect = 1e-60
Identities = 113/185 (61%), Positives = 135/185 (72%), Gaps = 6/185 (3%)
Frame = +2
Query: 59 PIQRSIIVDFINSLSTTGA-ALPSASAWWKTTEKYKVGSSALTVGKQFLHPAYTLGKNLK 117
P QRSI++DF+ SL++T A PS S WW+TTE Y+ G L VG Q L Y+LGK+LK
Sbjct: 2 PTQRSIVIDFLESLTSTSAPGAPSVSTWWQTTESYRGGPCTLVVGNQILDETYSLGKSLK 181
Query: 118 GKDLLALAT--KFNELSS---ITVVLTAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIW 172
L+ALA+ K N I V+LTA DV VE FCM++CGTHG + G+ + Y W
Sbjct: 182 NDHLVALASNPKLNSAPGDRVIHVILTAADVAVEDFCMNQCGTHGRGKNGNS-EKIAYAW 358
Query: 173 VGNAETLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGY 232
VGN+ T CPGQCAWPFHQP+YGPQT PLVAPNGDVGVDGMVINLAT+LAG VTNPF +GY
Sbjct: 359 VGNSVTQCPGQCAWPFHQPLYGPQTAPLVAPNGDVGVDGMVINLATVLAGAVTNPFEDGY 538
Query: 233 FQGPA 237
+QGPA
Sbjct: 539 YQGPA 553
>CD415108 similar to GP|14190477|gb AT5g64260/MSJ1_10 {Arabidopsis thaliana},
partial (37%)
Length = 629
Score = 198 bits (503), Expect = 3e-51
Identities = 88/113 (77%), Positives = 99/113 (86%)
Frame = +3
Query: 172 WVGNAETLCPGQCAWPFHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNG 231
WVGN+ T CPGQCAWPFHQP+YGPQTPPLVAPNGDVGVDGMVINLAT+ AG VTNPF +G
Sbjct: 291 WVGNSVTQCPGQCAWPFHQPLYGPQTPPLVAPNGDVGVDGMVINLATVWAGAVTNPFEDG 470
Query: 232 YFQGPAAAPLEAVTACTGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYL 284
Y+ GPA+APLEAV+ACTG+FG GAYPGYAG VL + A+G SYNA G GRK+L
Sbjct: 471 YYXGPASAPLEAVSACTGIFGKGAYPGYAGDVLAENATGVSYNAVGMRGRKFL 629
>CA820241 similar to GP|14190477|gb| AT5g64260/MSJ1_10 {Arabidopsis
thaliana}, partial (30%)
Length = 429
Score = 180 bits (457), Expect = 6e-46
Identities = 88/143 (61%), Positives = 104/143 (72%), Gaps = 5/143 (3%)
Frame = +1
Query: 83 SAWWKTTEKYKVGSSALTVGKQFLHPAYTLGKNLKGKDLLALAT--KFNELSS---ITVV 137
S WWKTTE Y+ G L VG Q L Y+LGK+LK +L+ALA+ K N + V+
Sbjct: 4 STWWKTTESYRGGPCTLVVGNQILDENYSLGKSLKNDNLVALASNPKLNSAPGDRVVHVI 183
Query: 138 LTAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAETLCPGQCAWPFHQPIYGPQT 197
LTA DV VE FCM++CGTHG + G+ + Y WVGN+ T CPGQCAWPFHQP+YGPQT
Sbjct: 184 LTAADVAVEDFCMNQCGTHGRGKNGNS-EKIAYAWVGNSVTQCPGQCAWPFHQPLYGPQT 360
Query: 198 PPLVAPNGDVGVDGMVINLATLL 220
PPLVAPNGDVGVDGMVINLAT+L
Sbjct: 361 PPLVAPNGDVGVDGMVINLATVL 429
>TC228874 similar to GB|BAB09857.1|9759402|AB008268 phi-1-like protein
{Arabidopsis thaliana;} , partial (37%)
Length = 615
Score = 179 bits (453), Expect = 2e-45
Identities = 83/113 (73%), Positives = 94/113 (82%)
Frame = +2
Query: 188 FHQPIYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQGPAAAPLEAVTAC 247
FH +YGPQT LVAPN DVGVDGMVINLAT+LAG VTNPF +GY+QGPA+ L AV+AC
Sbjct: 2 FHXXLYGPQTXXLVAPNXDVGVDGMVINLATVLAGAVTNPFEDGYYQGPASXXLXAVSAC 181
Query: 248 TGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSACKTLV 300
TG+FG GAYPGYAG VL + A+G+SYNA G GRK+LLPAMWDP TS CKTLV
Sbjct: 182 TGIFGKGAYPGYAGNVLAENATGASYNAVGVRGRKFLLPAMWDPLTSTCKTLV 340
>AW152953 similar to GP|14190477|gb| AT5g64260/MSJ1_10 {Arabidopsis
thaliana}, partial (31%)
Length = 419
Score = 157 bits (396), Expect = 7e-39
Identities = 71/98 (72%), Positives = 81/98 (82%)
Frame = +1
Query: 203 PNGDVGVDGMVINLATLLAGTVTNPFNNGYFQGPAAAPLEAVTACTGVFGSGAYPGYAGR 262
PNGDVGVDGMVI+LAT+LAG VTNPF NGY+QG A APLEAV+AC G+FG GAYPGY G
Sbjct: 7 PNGDVGVDGMVISLATVLAGAVTNPFGNGYYQGSATAPLEAVSACAGIFGKGAYPGYTGN 186
Query: 263 VLVDGASGSSYNAHGANGRKYLLPAMWDPQTSACKTLV 300
VLVD +G+ YNA +G K+LLPAMWDP TS CKTL+
Sbjct: 187 VLVDNVTGAIYNALDVHGHKFLLPAMWDPVTSTCKTLI 300
>TC224934 similar to UP|Q9SII5 (Q9SII5) Expressed protein
(At2g17230/T23A1.9), partial (70%)
Length = 953
Score = 141 bits (356), Expect = 3e-34
Identities = 88/244 (36%), Positives = 127/244 (51%), Gaps = 19/244 (7%)
Frame = +2
Query: 35 LKYHNGQLLKGKLTVNLIWYGTFTPIQRSIIVDFINSLSTT---GAALPSASAWWKTTEK 91
LKYH G +L + + LIWYG + Q+ +I DF+NS+S + PS S WW+T
Sbjct: 218 LKYHMGPVLSSPINIYLIWYGKWPQSQKLLIKDFLNSISDDHHRASPSPSVSDWWRTVSL 397
Query: 92 Y--KVG---SSALTVGKQFLHPAYTLGKNLKG---KDLLALATK-----FNELSSITVVL 138
Y + G S ++++ ++ Y+ G +L +D++A A + + + I ++L
Sbjct: 398 YTDQTGANISRSVSIAGEYSDLRYSHGTHLTRLSVQDVIATAVQAKPFPVDHRNGIYLIL 577
Query: 139 TAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAETLCPGQCAWPFHQPIY--GPQ 196
TA+DV +E FC + CG H G PY WVGN+ CP CA+PF P Y G
Sbjct: 578 TAEDVTMEDFCRAVCGFHYFTFPSKVGYTLPYAWVGNSGKQCPEVCAYPFAVPGYMGGGG 757
Query: 197 TPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQG-PAAAPLEAVTACTGVFGSGA 255
L PNGDVGVDGMV + LA +NP N ++ G AP E C G++G+G
Sbjct: 758 PGHLTPPNGDVGVDGMVSVIGHELAELSSNPLVNAWYAGEDPTAPTEIGDLCEGLYGTGG 937
Query: 256 YPGY 259
GY
Sbjct: 938 GGGY 949
>TC204378 similar to GB|BAB09857.1|9759402|AB008268 phi-1-like protein
{Arabidopsis thaliana;} , partial (24%)
Length = 546
Score = 135 bits (340), Expect = 2e-32
Identities = 60/73 (82%), Positives = 67/73 (91%)
Frame = +2
Query: 228 FNNGYFQGPAAAPLEAVTACTGVFGSGAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPA 287
FNNGY +GP APLEAV+ACTGVFGSG+YPGY GRVLVD A+G+SYNAHGANGR+YL+PA
Sbjct: 14 FNNGYLRGPPTAPLEAVSACTGVFGSGSYPGYPGRVLVDKATGASYNAHGANGRRYLVPA 193
Query: 288 MWDPQTSACKTLV 300
MWDPQTS CKTLV
Sbjct: 194 MWDPQTSTCKTLV 232
>TC228529 similar to UP|Q93YZ5 (Q93YZ5) AT5g51550/K17N15_10, partial (68%)
Length = 876
Score = 132 bits (332), Expect = 2e-31
Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 11/212 (5%)
Frame = +3
Query: 96 SSALTVGKQFLHPAYTLGKNLKG-------KDLLALATK---FNELSSITVVLTAKDVNV 145
S ++ +G++ Y+ GK+L K + T+ N S + ++LTA DV V
Sbjct: 45 SKSVRLGEEKNDRFYSHGKSLTRLSIQTVIKSAITAKTRPLPINPRSGLYLLLTADDVYV 224
Query: 146 EGFCMSRCGTHGSVRRGSGGARTPYIWVGNAETLCPGQCAWPFHQPIYGPQTPPLVAPNG 205
+ FC S CG H G PY WVGN+ CPGQCA+PF P Y P P +PNG
Sbjct: 225 QDFCTSVCGFHYFTFPSLVGYTLPYAWVGNSAKFCPGQCAYPFAVPAYIPNRKPFKSPNG 404
Query: 206 DVGVDGMVINLATLLAGTVTNPFNNGYFQG-PAAAPLEAVTACTGVFGSGAYPGYAGRVL 264
DVGVDGM+ + +A TNP N ++ G + P+E C G++G+G Y G+V
Sbjct: 405 DVGVDGMISVIGHEMAELATNPLANAWYAGQDPSFPVEIADLCEGIYGTGGGGSYTGQVF 584
Query: 265 VDGASGSSYNAHGANGRKYLLPAMWDPQTSAC 296
D G++YN +G RK+L+ +W + C
Sbjct: 585 -DARDGATYNMNGIR-RKFLVQWLWSHVLNYC 674
>TC224906 similar to UP|Q9SII5 (Q9SII5) Expressed protein
(At2g17230/T23A1.9), partial (45%)
Length = 627
Score = 128 bits (322), Expect = 3e-30
Identities = 70/163 (42%), Positives = 90/163 (54%), Gaps = 3/163 (1%)
Frame = +2
Query: 137 VLTAKDVNVEGFCMSRCGTHGSVRRGSGGARTPYIWVGNAETLCPGQCAWPFHQPIY--G 194
+LTA+DV +E FC + CG H G PY WVGN+ CP CA+PF P Y G
Sbjct: 2 ILTAEDVTMEDFCRAVCGFHYFTFPSKVGYTLPYAWVGNSGKQCPEVCAYPFAVPGYMGG 181
Query: 195 PQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQG-PAAAPLEAVTACTGVFGS 253
L PNGDVGVDGMV + LA +NP N ++ G AP E C G++G+
Sbjct: 182 GGPGHLTPPNGDVGVDGMVSVIGHELAELSSNPLVNAWYAGEDPTAPTEIGDLCEGLYGT 361
Query: 254 GAYPGYAGRVLVDGASGSSYNAHGANGRKYLLPAMWDPQTSAC 296
G GY G V+ DG G ++N +G NGRK+L+ +W P AC
Sbjct: 362 GGGGGYIGSVMKDG-EGRTFNLNGRNGRKFLVQWIWSPVLKAC 487
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,578,796
Number of Sequences: 63676
Number of extensions: 220640
Number of successful extensions: 1148
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of query: 300
length of database: 12,639,632
effective HSP length: 97
effective length of query: 203
effective length of database: 6,463,060
effective search space: 1312001180
effective search space used: 1312001180
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC121245.10