TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC121238.3 - phase: 0 /pseudo
         (423 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC223666 UP|O81532 (O81532) Mariner transposase, complete              99  5e-21
TC214675 similar to UP|Q6YGT9 (Q6YGT9) Purple acid phosphatase-l...    29  4.6

>TC223666 UP|O81532 (O81532) Mariner transposase, complete
          Length = 1278

 Score = 98.6 bits (244), Expect = 5e-21
 Identities = 101/295 (34%), Positives = 150/295 (50%), Gaps = 1/295 (0%)
 Frame = +3

Query: 112 RCFASAFKCTKTTHDR**YESSS*ILFVHVGGK*HSI*AKV*VNAQCYSHR*KVVLCDQK 171
           RC  ++F+C K T DR   + +  ILFV      ++ *+ V    Q YSH *K+VL D++
Sbjct: 342 RCNKASFECHKATTDRGR*KIAVGILFVDA*R--YTA*SNVPKYVQYYSH**KMVLHDEE 515

Query: 172 ISELLPSCR*G*SIPSVQKQKLSNEGHVYSCSG*T*V*LCRS*NMVGKNWSVASS*KSAC 231
           I E+L + R G*+   + K K  ++ +V++C   T +*L +  N   +NW+         
Sbjct: 516 I*EILFAPRRG*TTS*L*K*KFCSKSYVFNCCSSTKI*LGKKCNFFRENWNFPVCHSRTG 695

Query: 232 KKVQCQ*TRRDTRNKTNRFYY*RS*SNVLKRQDFTGRQRKSATRTCIGNNLHSTR*CTVS 291
            K +C  +  +  +K+N F  *R        +  +  +   A R    N++HSTR*C  S
Sbjct: 696 *KDKC*QSGGNNGDKSNNFDK*RPHKVSFY*ESASSYKGSVAKRRIGVNDIHSTR*CKNS 875

Query: 292 CFC**RRISSSSF*RWI*HPFD*SAT*FS*FKCIGFGIFCSHSSITTKESDKDG**TYSS 351
              **  + S S  RWI*HPF+ S +*FS   C+G  IF  ++ I  + S  + * T   
Sbjct: 876 Y*S**S*VCSGSHTRWI*HPFNVSTS*FSGL*CLGPRIFQCYTVIALQGST*NY*RTCQC 1055

Query: 352 SANFV**IF*CGFKQ-NISYTSVVHD*NHEG*RVQ*I*DSSYEERCHA*TSYTTH 405
           S   V* +  CG  Q +IS  +V+HD ++E  R Q*I  S+Y E        TTH
Sbjct: 1056SGEVV*KLL-CGEVQFHISLIAVMHDRDNESQRFQ*IYISAYAEGKIRNRRTTTH 1217


>TC214675 similar to UP|Q6YGT9 (Q6YGT9) Purple acid phosphatase-like protein,
           partial (34%)
          Length = 841

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 88  T*QSSISSRSIRVYHWTTNEVNKK 111
           T*QS I +R+  +YHW  N+  KK
Sbjct: 375 T*QSEIKNRTHAIYHWYRNDDGKK 446


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.372    0.162    0.611 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,876,700
Number of Sequences: 63676
Number of extensions: 267094
Number of successful extensions: 2743
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 1235
Number of HSP's gapped (non-prelim): 1608
length of query: 423
length of database: 12,639,632
effective HSP length: 100
effective length of query: 323
effective length of database: 6,272,032
effective search space: 2025866336
effective search space used: 2025866336
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.9 bits)
S2: 60 (27.7 bits)