TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC121234.2 + phase: 0 
         (1118 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC220721 similar to UP|Q942A0 (Q942A0) Beta Galactosidase-like p...   162  1e-39
BM107835 similar to GP|16930405|gb| At2g32080/F22D22.17 {Arabido...    34  0.41
TC213549 similar to UP|Q84XI2 (Q84XI2) Glycosyl hydrolase, parti...    33  0.54
BF425633                                                               32  1.2
TC232975 similar to UP|Q7L5R2 (Q7L5R2) Testis-specific protein T...    32  1.6
TC206036 similar to UP|Q8YN47 (Q8YN47) Threonyl-tRNA synthetase,...    30  6.0
TC233539 similar to UP|Q711Q9 (Q711Q9) Allene oxide cyclase prec...    30  6.0

>TC220721 similar to UP|Q942A0 (Q942A0) Beta Galactosidase-like protein,
            partial (7%)
          Length = 662

 Score =  162 bits (409), Expect = 1e-39
 Identities = 72/86 (83%), Positives = 81/86 (93%)
 Frame = +2

Query: 1033 MQMSASYYSTSELDRAGHDYELVKGDNIEVHLDHKHMGLGGDDSWSPCVHDQYLVPPVPY 1092
            +QMSASYYSTSELDRA H+ EL++GD+IE+HLDHKHMGLGGDDSWSPCVH+QYL+PPVPY
Sbjct: 8    VQMSASYYSTSELDRATHNEELIEGDSIEIHLDHKHMGLGGDDSWSPCVHEQYLIPPVPY 187

Query: 1093 SFSVRLSPVTPATSGHDIYRSQLQNS 1118
            SFSVRL PV PATSGHDIY+SQ QNS
Sbjct: 188  SFSVRLCPVNPATSGHDIYKSQFQNS 265


>BM107835 similar to GP|16930405|gb| At2g32080/F22D22.17 {Arabidopsis
           thaliana}, partial (16%)
          Length = 623

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 29/82 (35%), Positives = 37/82 (44%), Gaps = 9/82 (10%)
 Frame = -3

Query: 127 LPVPSNWQLH---GFDRPIYTNVTYPFPLDPPFVPTENP-TGCYRMDF---HLPKEWEGR 179
           LP  S WQ     GF  P   +   P  L PP    +NP T   R      HL   W G 
Sbjct: 375 LPTXSVWQEQFKCGF--PPLLSAGVPLHLPPPITNXDNPATDLNRHSLVTAHLGFVWFGL 202

Query: 180 RILLHFE--AVDSAFCAWINGH 199
           RILLHF+  A   +F  +++G+
Sbjct: 201 RILLHFKVTATTVSFFXFVDGY 136


>TC213549 similar to UP|Q84XI2 (Q84XI2) Glycosyl hydrolase, partial (19%)
          Length = 551

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 17/184 (9%)
 Frame = +3

Query: 359 PKLW---SAEQPYLYTLVVVLKDKSGRVLDCESSQVGFKNVSK------AHKQLLVNGHP 409
           P LW      +  LY +++ +  K     D  +   GF+ +          +   VNG P
Sbjct: 21  PNLWWPNGMGKQSLYNVIINIDIKGYGESDSWNHHFGFRKIESHIDGATGGRLFKVNGEP 200

Query: 410 VVIRGVN--RHEHHPEVGKANIESCMVKDLVLMKQNNINAVR--NSHYPQHPRWYELCDL 465
           + IRG N    +    + K   E+    D+      N N +R       + P +Y  CD 
Sbjct: 201 IFIRGGNWILSDGLLRLSKKRYET----DIKFHADMNFNMIRCWGGGLTERPEFYHYCDY 368

Query: 466 FGMYMIDE----ANIETHGFDYSKHLKHPTLEPMWATAMLDRVIGMVERDKNHTCIISWS 521
           +G+ +  E     +++  G   S    +P   P+     L      V+  +NH  +  W 
Sbjct: 369 YGLLVWQEFWITGDVDGRGIPVS----NPN-GPLDHDLFLFCARDTVKLLRNHPSLALWV 533

Query: 522 LGNE 525
            GNE
Sbjct: 534 GGNE 545


>BF425633 
          Length = 419

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +3

Query: 486 HLKHPTLE--PMWATAMLDRVIGMVERDKNHTCIISWSLGNESGFGTNHFAMAGWI 539
           HL +PTL   P W   +LD ++GMV+ D  HT  ++ +  +      ++ ++A WI
Sbjct: 6   HLFNPTLSIAPNWREVLLDTMMGMVD*DHGHTGHLTHTSMSCCVCFFHYLSIASWI 173


>TC232975 similar to UP|Q7L5R2 (Q7L5R2) Testis-specific protein TES101RP,
            partial (6%)
          Length = 580

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 28/106 (26%), Positives = 45/106 (42%)
 Frame = -3

Query: 988  KSVDELHVPYIVPGESGGRADVRWATFLNKNGFGIYTSKYGSSPPMQMSASYYSTSELDR 1047
            K+  + HV  +VP +S  + D++W+ +LN   F + T     S   Q + S YS+ E   
Sbjct: 386  KADKDAHV--VVPLQSSEQEDIKWSEYLNNTPFSLGT----MSVQHQTTNSLYSSDE--- 234

Query: 1048 AGHDYELVKGDNIEVHLDHKHMGLGGDDSWSPCVHDQYLVPPVPYS 1093
                   VK +           G   D+S + C H Q+  P   Y+
Sbjct: 233  -------VKPET---------TGFIADESSASCHHSQHFQPSEIYT 144


>TC206036 similar to UP|Q8YN47 (Q8YN47) Threonyl-tRNA synthetase, partial
           (35%)
          Length = 1334

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
 Frame = -3

Query: 316 SGSWESSDGNPDLLSSNVADITFQPTTTPLGFYGYTL----VGKLQSPKLWSAEQPYLYT 371
           +G   SS  N DL  +     +F+PTTT  G + ++     +G+ +SP   SA  PY+ +
Sbjct: 885 TGMVPSSPPNLDLTVTVSVSTSFEPTTTINGIFCFSAFLISLGR-RSPWQTSARMPYILS 709

Query: 372 LVV 374
           L+V
Sbjct: 708 LLV 700


>TC233539 similar to UP|Q711Q9 (Q711Q9) Allene oxide cyclase precursor  ,
           partial (22%)
          Length = 265

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 3   SSPSSSLVGPLLLAPNNGYKVWEDPSFIKWRKRDPHVHLHC 43
           S+P +S    L + PN  +K+   PS I  +K+    H HC
Sbjct: 90  SNPKASRFKSLSILPNQNFKILSYPSSIYIQKKYQQDHYHC 212


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.318    0.136    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,493,700
Number of Sequences: 63676
Number of extensions: 1038477
Number of successful extensions: 4536
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4533
length of query: 1118
length of database: 12,639,632
effective HSP length: 107
effective length of query: 1011
effective length of database: 5,826,300
effective search space: 5890389300
effective search space used: 5890389300
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)