BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC119414.2 + phase: 0
(636 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC217866 230 1e-60
TC207556 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl... 229 4e-60
TC208509 similar to UP|Q9LRP8 (Q9LRP8) Non-phototropic hypocotyl... 215 6e-56
TC222625 similar to GB|BAB11327.1|10177916|AB016886 photorecepto... 201 8e-52
AW781720 198 7e-51
TC230833 178 6e-45
TC222154 172 5e-43
TC211209 157 2e-38
TC207970 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23... 149 5e-36
TC231995 similar to GB|BAB11327.1|10177916|AB016886 photorecepto... 139 4e-33
TC230959 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl... 137 1e-32
BI497474 similar to GP|15451228|gb| photoreceptor-interacting pr... 134 1e-31
TC231319 similar to UP|Q9LFU0 (Q9LFU0) Non-phototropic hypocotyl... 130 1e-30
TC213886 125 6e-29
TC229238 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (40%) 124 2e-28
TC223643 similar to UP|Q9FJY3 (Q9FJY3) Photoreceptor-interacting... 118 7e-27
TC209886 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (39%) 115 5e-26
TC218140 107 2e-23
TC233658 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23... 104 1e-22
TC234775 similar to UP|Q9FMF5 (Q9FMF5) Non-phototropic hypocotyl... 103 2e-22
>TC217866
Length = 1362
Score = 230 bits (587), Expect = 1e-60
Identities = 142/357 (39%), Positives = 205/357 (56%), Gaps = 11/357 (3%)
Frame = +2
Query: 283 SKHRLLLESIVSLLPTEKGAVSCSFLLKLLKASNILNASSSSKMELARRVGLQLEEATVN 342
SKHRL++E+IV LLPTEKG+V C FLLKLLKA+ + + +K EL +R+G QLEEA+V+
Sbjct: 41 SKHRLIVETIVWLLPTEKGSVPCRFLLKLLKAAIFVESGDRTKEELVKRIGQQLEEASVS 220
Query: 343 DLLIPSLSYTNDTLYDVELVMTILEQFMLQGQSPPTSPPRSLKTFERRRSRSAENINF-E 401
D+LI + T+YDV +V I+ +F F + + E++ E
Sbjct: 221 DILIQAPD--GATIYDVSIVQNIVREF-----------------FMKNGNAEIESVGGDE 343
Query: 402 LQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFSLSKFIALADIIPEFARYDHDDLYR 461
L+ R+ S +SKL VAKL+D YL E+A+D N L +F+ LA+++ +R HD LYR
Sbjct: 344 LEGIRKPGILSDASKLMVAKLIDEYLAEIAKDPNLPLPEFVNLAELVSSISRPAHDGLYR 523
Query: 462 AIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR-A 520
AID YLK HP +NK E+KR+C+++DC+KLS++AC+HA QNE LPLRVVVQVL+FEQ R A
Sbjct: 524 AIDTYLKEHPAINKGEKKRICKLMDCRKLSVDACLHAVQNERLPLRVVVQVLYFEQLRTA 703
Query: 521 ASSGGKVTELQSNIKALLTTHGIDPSKHTTTQLSSTTSIQGEDNWSVSGFKSPKSKSSTL 580
ASSG ++ IK L TT ++ + K+ + + ++L
Sbjct: 704 ASSGTSTPDIPRGIKDLNNESNGSSRSGTTNPEDELDAVA-----TAEELKALRKELASL 868
Query: 581 RMKLAEEHDEFDENGLVNDDGIGRN---------SKFKSICALPTQPKKMLSKLWST 628
R+ NG+ N+D G N SK K + + KK K+W++
Sbjct: 869 RL----------SNGVGNNDKDGDNKPSMDKAVMSKVKGL----LKSKKSFIKIWAS 997
>TC207556 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl 3, partial
(43%)
Length = 1457
Score = 229 bits (583), Expect = 4e-60
Identities = 136/345 (39%), Positives = 209/345 (60%), Gaps = 4/345 (1%)
Frame = +1
Query: 253 LPNISKNGNR--KKNVSLAESESNSDSASEITSKHRLLLESIVSLLPTEKGAVSCSFLLK 310
+ N S +G K + + + + D++S + R+++ES+VS++P +K +VSCSFLL+
Sbjct: 52 MSNSSSSGGSSWKGGLHMVVTGTKDDTSSLQAKEQRMIIESLVSIIPPQKDSVSCSFLLR 231
Query: 311 LLKASNILNASSSSKMELARRVGLQLEEATVNDLLIPSLSYTNDTLYDVELVMTILEQFM 370
LL+ + +L + + EL +RVG+Q E+AT+ DLLIPS + +T+YDV+LV +LE F+
Sbjct: 232 LLRMAIMLKVAPALVTELEKRVGMQFEQATLADLLIPSYN-KGETMYDVDLVQRLLEHFI 408
Query: 371 LQGQSPPTSPPRSLKTFERRRSRSAENINFELQESRRSSSASHSSKLKVAKLVDRYLQEV 430
+Q Q+ +SP R+ + ++ ++K +VA+LVD YL EV
Sbjct: 409 VQEQTESSSPSRNSFSDKQHMGMGM------------GMGCILNAKARVARLVDSYLTEV 552
Query: 431 ARDVNFSLSKFIALADIIPEFARYDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKL 490
+RD N SL+KF LA+ +PE AR D LYRAID YLKAHP L++ ERKRLCR++DC+KL
Sbjct: 553 SRDRNLSLTKFQVLAEALPESARTCDDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKL 732
Query: 491 SMEACMHAAQNELLPLRVVVQVLFFEQARA--ASSGGKVTELQSNIKALLTTHGIDPSKH 548
S++AC+HAAQNE LPLRVVVQVLF EQ + A + V +++S A++T
Sbjct: 733 SIDACLHAAQNERLPLRVVVQVLFAEQVKISNALASSSVKDVESESHAMVTNRKTLLEGT 912
Query: 549 TTTQLSSTTSIQGEDNWSVSGFKSPKSKSSTLRMKLAEEHDEFDE 593
+ T+ + + N +S K+K L+ +A +FD+
Sbjct: 913 PQSFQEGWTAAKKDINTLKFELESVKAKYMELQNDMASLQKQFDK 1047
>TC208509 similar to UP|Q9LRP8 (Q9LRP8) Non-phototropic hypocotyl-like
protein, partial (63%)
Length = 972
Score = 215 bits (547), Expect = 6e-56
Identities = 124/309 (40%), Positives = 182/309 (58%)
Frame = +3
Query: 211 WAEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNISKNGNRKKNVSLAE 270
W +D + +D +T+ +IK G V ++LIG + YAS WLP++S +
Sbjct: 6 WFDDACIVDMDYLVKTLSSIKQKG-VRADLIGSIITHYASIWLPDLSSSAENGVTTHFQS 182
Query: 271 SESNSDSASEITSKHRLLLESIVSLLPTEKGAVSCSFLLKLLKASNILNASSSSKMELAR 330
ES ++S K R +E++VS+LP EK +V C+FLL+LL+ +N++ ++ + EL
Sbjct: 183 PESVTNS----WMKKRFFVETLVSVLPPEKDSVPCNFLLRLLRTANMVRVDATYRGELEN 350
Query: 331 RVGLQLEEATVNDLLIPSLSYTNDTLYDVELVMTILEQFMLQGQSPPTSPPRSLKTFERR 390
R+ QL++A++ +L+IPS S+T TL DVELV+ ++++FM
Sbjct: 351 RISWQLDQASLKELMIPSFSHTCGTLLDVELVLRLVKRFM-------------------- 470
Query: 391 RSRSAENINFELQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFSLSKFIALADIIPE 450
S ++ +KVAKLVD YL E A D N +LS+FIALA +P
Sbjct: 471 -----------------SLDRDGAALVKVAKLVDCYLAEAAVDANLTLSEFIALAGALPS 599
Query: 451 FARYDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVV 510
+R D LYRAID YLKAHP+++K ERK LCR+LD +KL+ EA +HAAQNE LP+R V+
Sbjct: 600 HSRATDDGLYRAIDTYLKAHPDVSKQERKGLCRLLDSRKLTTEASLHAAQNERLPVRAVI 779
Query: 511 QVLFFEQAR 519
QVLF EQ +
Sbjct: 780 QVLFSEQTK 806
>TC222625 similar to GB|BAB11327.1|10177916|AB016886
photoreceptor-interacting protein-like {Arabidopsis
thaliana;} , partial (31%)
Length = 663
Score = 201 bits (511), Expect = 8e-52
Identities = 102/227 (44%), Positives = 148/227 (64%)
Frame = +3
Query: 70 VQLPDFPGGVEAFELCAKFCYGIQITLSPYNIVAARCAAEYLQMTEEVEKGNLIHKLEVF 129
++L D PGG +AFELCAKFCYGI I +S +N V+A CAA++L+M + +EKGN + KLE F
Sbjct: 33 LELHDIPGGEDAFELCAKFCYGIAINISAHNFVSALCAAKFLRMNDSIEKGNFVGKLESF 212
Query: 130 FNSCILHGWKDTIVSLQTTKALHLWSEDLGITSRCIETIASKVLSHPTKVSLSHSHSRRV 189
FNSCIL GWKD+I +LQTT L WSE+LGI +CI++I K+L+ P +V S++++R
Sbjct: 213 FNSCILEGWKDSIATLQTTATLPEWSENLGIVRKCIDSIIEKILTPPPQVKWSYTYTR-- 386
Query: 190 RDDISCNDTESLRIKSGSKGWWAEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYA 249
+ S K WW ED+++L IDL+ ++AI+S +P LIG+AL +YA
Sbjct: 387 ------PGYTKKQHHSVPKDWWTEDVSDLDIDLFRCIIMAIRSTYVLPPQLIGEALHVYA 548
Query: 250 SRWLPNISKNGNRKKNVSLAESESNSDSASEITSKHRLLLESIVSLL 296
RWLP ++K + S S++ E K+R +LE+IVS++
Sbjct: 549 CRWLPGLTK---------IKSSCSSASQTEESKEKNRKILETIVSMI 662
>AW781720
Length = 366
Score = 198 bits (503), Expect = 7e-51
Identities = 100/118 (84%), Positives = 109/118 (91%)
Frame = +3
Query: 458 DLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQ 517
DLYRAIDIYLKAHPEL+KSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQ
Sbjct: 3 DLYRAIDIYLKAHPELSKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQ 182
Query: 518 ARAASSGGKVTELQSNIKALLTTHGIDPSKHTTTQLSSTTSIQGEDNWSVSGFKSPKS 575
RAA++GGKV+++ SNIKALLT +GIDPSKH T LS+TTSI +DNWSVSGFKS KS
Sbjct: 183 VRAAAAGGKVSDMPSNIKALLTANGIDPSKH-TAPLSTTTSIHVDDNWSVSGFKSSKS 353
>TC230833
Length = 732
Score = 178 bits (452), Expect = 6e-45
Identities = 97/207 (46%), Positives = 133/207 (63%)
Frame = +1
Query: 317 ILNASSSSKMELARRVGLQLEEATVNDLLIPSLSYTNDTLYDVELVMTILEQFMLQGQSP 376
IL S S L +R+G+QL++AT+ LL+P+ SY+ +TLY+V+ V IL+ F+ Q
Sbjct: 19 ILRVSPSCISNLEKRIGMQLDQATLEGLLMPNFSYSMETLYNVDCVQRILDHFLAMDQVT 198
Query: 377 PTSPPRSLKTFERRRSRSAENINFELQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNF 436
+ P S+ + + S S + VAKL+D YL EVA D+N
Sbjct: 199 GCASPCSI------------------DDGQLIGSPSLTPITMVAKLIDGYLAEVAPDINL 324
Query: 437 SLSKFIALADIIPEFARYDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACM 496
L KF ALA +PE+AR D LYRAIDIYLK+HP L +SER++LCR++DC+KLS+EAC
Sbjct: 325 KLPKFQALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACT 504
Query: 497 HAAQNELLPLRVVVQVLFFEQARAASS 523
HAAQNE LP+R++VQVLFFEQ + +S
Sbjct: 505 HAAQNERLPIRIIVQVLFFEQLQLRTS 585
>TC222154
Length = 600
Score = 172 bits (435), Expect = 5e-43
Identities = 88/188 (46%), Positives = 123/188 (64%), Gaps = 3/188 (1%)
Frame = +1
Query: 38 RYLLHKFPLLSKCLCLQRLCSESPPDSSHHQIVQLPDFPGGVEAFELCAKFCYGIQITLS 97
++ LHKFPLLSK +Q L S + ++ VQ+ D PGG FE+CAKFCYG+ +TL+
Sbjct: 19 KFYLHKFPLLSKSSHIQTLISLNNEENVDE--VQISDIPGGANTFEICAKFCYGMTVTLN 192
Query: 98 PYNIVAARCAAEYLQMTEEVEKGNLIHKLEVFFNSCILHGWKDTIVSLQTTKALHLWSED 157
YN++A RCAAEYL M E +EKGNLI+K++VF +S I WKD+I+ LQT+K++ ED
Sbjct: 193 AYNVIATRCAAEYLGMHEAIEKGNLIYKIDVFLSSSIFRSWKDSIILLQTSKSMLPLVED 372
Query: 158 LGITSRCIETIASKVLSHPTKVSLSHSHSRR---VRDDISCNDTESLRIKSGSKGWWAED 214
L + S CIE+IA+K +KV S++++R+ + I N LR + K WW ED
Sbjct: 373 LKVVSHCIESIANKACVDVSKVDWSYTYNRKKLPEENGIESNQ-NGLRTRLVPKDWWVED 549
Query: 215 LAELSIDL 222
L EL +DL
Sbjct: 550 LCELEVDL 573
>TC211209
Length = 681
Score = 157 bits (396), Expect = 2e-38
Identities = 86/114 (75%), Positives = 97/114 (84%), Gaps = 3/114 (2%)
Frame = +2
Query: 526 KVTELQSNIKALLTTHGIDPSKHTTTQLSSTTSIQGEDNWSVSGFKSPKSKSSTLRMKLA 585
KVT+L +NIKALLT HGIDPSK T LS+TTSI EDNWSVS FKSPKSKSSTLRMKLA
Sbjct: 2 KVTDLPTNIKALLTAHGIDPSK-PTAPLSTTTSINAEDNWSVSNFKSPKSKSSTLRMKLA 178
Query: 586 EEHDEFDENGLVNDDGIGRNSKFKSICALPTQPKKMLSKLWS-TNRTA--TEKN 636
E+ D F++NGL + DGIGRNS+FK+ICA+PTQPKKML+K WS TNRTA TEKN
Sbjct: 179 EDED-FNQNGLAH-DGIGRNSRFKAICAIPTQPKKMLTKFWSTTNRTAATTEKN 334
>TC207970 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23, partial
(16%)
Length = 1114
Score = 149 bits (375), Expect = 5e-36
Identities = 82/223 (36%), Positives = 130/223 (57%)
Frame = +1
Query: 341 VNDLLIPSLSYTNDTLYDVELVMTILEQFMLQGQSPPTSPPRSLKTFERRRSRSAENINF 400
++DLLIPS S+T DTL+DV+ V I+ ++ S++ ++ F
Sbjct: 4 LDDLLIPSYSFTGDTLFDVDTVQRIMSNYL--------------------ESQTGNHLVF 123
Query: 401 ELQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFSLSKFIALADIIPEFARYDHDDLY 460
+ S S + V KL++ Y+ E+A D N +++KF +LA++IPE +R D +Y
Sbjct: 124 NADDEYFSPPQSDMER--VGKLMENYIAEIATDRNLAVTKFTSLAELIPEQSRPTEDGMY 297
Query: 461 RAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARA 520
RAIDI+LKAHP L+ +RK++C ++DC+KLS EAC HAAQN+ LP++ VVQVL++EQ R
Sbjct: 298 RAIDIFLKAHPALSDMDRKKVCSVMDCQKLSREACAHAAQNDRLPVQTVVQVLYYEQQRL 477
Query: 521 ASSGGKVTELQSNIKALLTTHGIDPSKHTTTQLSSTTSIQGED 563
++ +S++ + L + D H + ST + ED
Sbjct: 478 RNAMNGSRSGESSVDSKLNVYSTD--LHPVSNELSTLRRENED 600
>TC231995 similar to GB|BAB11327.1|10177916|AB016886
photoreceptor-interacting protein-like {Arabidopsis
thaliana;} , partial (19%)
Length = 918
Score = 139 bits (350), Expect = 4e-33
Identities = 77/178 (43%), Positives = 107/178 (59%)
Frame = +2
Query: 342 NDLLIPSLSYTNDTLYDVELVMTILEQFMLQGQSPPTSPPRSLKTFERRRSRSAENINFE 401
+DLL PS S + YD ELV+ +LE ++ F +R S A +
Sbjct: 2 SDLLYPSTSPLDHNFYDTELVLAVLESYL---------------KFWKRISPGAVDKRHL 136
Query: 402 LQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFSLSKFIALADIIPEFARYDHDDLYR 461
++ R V KL+D YLQ VARD N +SKF++LA+ +P R HDDLY+
Sbjct: 137 IKSIR-----------SVGKLIDSYLQVVARDDNMPVSKFVSLAETVPAIGRL*HDDLYQ 283
Query: 462 AIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR 519
AI+IYLK HP+L+K+++KRLC IL+C+KL+ E HA +NE LPLR VVQ+L+FEQ +
Sbjct: 284 AINIYLKVHPDLSKADKKRLCGILECQKLTPEVRAHAVKNEFLPLRTVVQLLYFEQEK 457
>TC230959 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl 3, partial
(26%)
Length = 944
Score = 137 bits (345), Expect = 1e-32
Identities = 67/102 (65%), Positives = 82/102 (79%)
Frame = +1
Query: 422 LVDRYLQEVARDVNFSLSKFIALADIIPEFARYDHDDLYRAIDIYLKAHPELNKSERKRL 481
LVD YL EV+RD N SL+KF L++ +PE AR D LYRAID YLKAHP L + ERKRL
Sbjct: 10 LVDSYLTEVSRDRNLSLTKFQVLSEALPESARTSDDGLYRAIDSYLKAHPTLTEHERKRL 189
Query: 482 CRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAASS 523
CR++DC+KLS++ACMHAAQNE LPLRVVVQVLF EQ + +++
Sbjct: 190 CRVMDCQKLSIDACMHAAQNERLPLRVVVQVLFSEQVKISNA 315
>BI497474 similar to GP|15451228|gb| photoreceptor-interacting protein-like
{Arabidopsis thaliana}, partial (16%)
Length = 426
Score = 134 bits (337), Expect = 1e-31
Identities = 72/159 (45%), Positives = 97/159 (60%)
Frame = +3
Query: 343 DLLIPSLSYTNDTLYDVELVMTILEQFMLQGQSPPTSPPRSLKTFERRRSRSAENINFEL 402
DLLI + DT++ V++V ++E+F+ GQ T + E
Sbjct: 3 DLLIRAP--VGDTIFYVDIVQRLVEEFVACGQQVQTD----------------SLLEDEF 128
Query: 403 QESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFSLSKFIALADIIPEFARYDHDDLYRA 462
QE R S SK KVAKLVD YL E+ARD N L+KF+ LA+++ F R HD LYRA
Sbjct: 129 QEIRSPGMVSDPSKAKVAKLVDGYLAEIARDPNLPLAKFVNLAELVSSFTRASHDGLYRA 308
Query: 463 IDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQN 501
ID+YLK HP ++KSERK++CR+++C+ LS EACMHA QN
Sbjct: 309 IDMYLKEHPGISKSERKKICRLMNCRNLSAEACMHAVQN 425
>TC231319 similar to UP|Q9LFU0 (Q9LFU0) Non-phototropic hypocotyl 3-like
protein, partial (31%)
Length = 897
Score = 130 bits (328), Expect = 1e-30
Identities = 60/120 (50%), Positives = 85/120 (70%)
Frame = +2
Query: 400 FELQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFSLSKFIALADIIPEFARYDHDDL 459
F + E ++ + K +++L+D YL E+ARD N S++KF A+++PE R D L
Sbjct: 98 FLMHEQQQIQQQQKTRKFNISRLLDNYLAEIARDPNLSITKFQVFAELLPENTRSYDDGL 277
Query: 460 YRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR 519
YRAID YLK P L + +RKRLC+I++C+KLS++AC+HAAQNE LPLR VVQ+LF EQ +
Sbjct: 278 YRAIDTYLKTQPSLTEHDRKRLCKIMNCEKLSLDACLHAAQNERLPLRTVVQILFSEQVK 457
>TC213886
Length = 718
Score = 125 bits (314), Expect = 6e-29
Identities = 83/231 (35%), Positives = 119/231 (50%)
Frame = +2
Query: 23 SSEVSSDLIIQVRGSRYLLHKFPLLSKCLCLQRLCSESPPDSSHHQIVQLPDFPGGVEAF 82
S E+ SD+ +QV + LHKFPL+SK + +L SES D S ++L D PGG EAF
Sbjct: 38 SHEILSDVTVQVGEVSFSLHKFPLVSKSGYIGKLVSESSDDVS---FIELYDVPGGAEAF 208
Query: 83 ELCAKFCYGIQITLSPYNIVAARCAAEYLQMTEEVEKGNLIHKLEVFFNSCILHGWKDTI 142
EL KFCYGI +S NI RC AEY MTE+ GNL+ +++ + N L +
Sbjct: 209 ELATKFCYGINFEISVENIATLRCVAEYFGMTEDYSVGNLVGRVDSYLNEVALKTISGAV 388
Query: 143 VSLQTTKALHLWSEDLGITSRCIETIASKVLSHPTKVSLSHSHSRRVRDDISCNDTESLR 202
L ++ +E + SRCI+ IA + S T+ +R DI D +
Sbjct: 389 SILHMSERFLPIAEKAKLVSRCIDAIAF-IASKETQ------FCSPMRGDIIGTDGMASH 547
Query: 203 IKSGSKGWWAEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWL 253
+ WWAEDL L ID++ R +IA+ + G +G + +YA + L
Sbjct: 548 -QRPVVHWWAEDLTVLRIDIFQRVLIAMMARG-FKQFALGPIIMLYAQKSL 694
>TC229238 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (40%)
Length = 1111
Score = 124 bits (310), Expect = 2e-28
Identities = 74/207 (35%), Positives = 115/207 (54%)
Frame = +3
Query: 330 RRVGLQLEEATVNDLLIPSLSYTNDTLYDVELVMTILEQFMLQGQSPPTSPPRSLKTFER 389
+RV LE TV+DLL+ + SY + L D++ V I+ F+ ER
Sbjct: 6 KRVTEILEHVTVDDLLVLTFSYDGERLLDLDSVRRIISGFV-----------------ER 134
Query: 390 RRSRSAENINFELQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFSLSKFIALADIIP 449
+ + N E ++ +VAK VD YL E+A S+SKF +A +IP
Sbjct: 135 EKGTTVFNAGVNFNEDFSATMQ------RVAKTVDSYLAEIAAYAELSISKFNGIAILIP 296
Query: 450 EFARYDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVV 509
+ AR DDLYRA+DIYLK HP L++ E++++C +LD KLS EA +HA++N+ LPL++V
Sbjct: 297 KGARKSDDDLYRAVDIYLKVHPNLDEIEKEKVCSVLDTLKLSYEARVHASKNKRLPLQIV 476
Query: 510 VQVLFFEQARAASSGGKVTELQSNIKA 536
+ L+++Q + S G + Q+ + A
Sbjct: 477 LHALYYDQLQIRS--GTAADKQAVVAA 551
>TC223643 similar to UP|Q9FJY3 (Q9FJY3) Photoreceptor-interacting
protein-like, partial (27%)
Length = 737
Score = 118 bits (296), Expect = 7e-27
Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
Frame = +3
Query: 430 VARDVNFSLSKFIALADIIPEFARYDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKK 489
+A D N SKF LA +P+ AR HD LYRA+D+YLKAHP ++KS+R+++C +LDC+K
Sbjct: 3 IATDANLKPSKFYDLAISVPDRARLFHDGLYRAVDVYLKAHPWVSKSDREKICAVLDCQK 182
Query: 490 LSMEACMHAAQNELLPLRVVVQVLFFEQARAASS-GGKVTELQSNIKALLTTHGIDPSKH 548
L++EAC HAAQNE LPLR VV+VLFFEQ + + GK+ + +PS+H
Sbjct: 183 LTLEACSHAAQNERLPLRAVVRVLFFEQLQLRRAIAGKLGAAE------------EPSRH 326
Query: 549 TTTQLSSTTSIQGEDNWSVS 568
+ W V+
Sbjct: 327 SAAMAEEEEVEDDNTTWQVT 386
>TC209886 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (39%)
Length = 844
Score = 115 bits (289), Expect = 5e-26
Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 2/273 (0%)
Frame = +1
Query: 23 SSEVSSDLIIQVRGSRYLLHKFPLLSKCLCLQRLCSESPPDSSHHQIVQLPDFPGGVEAF 82
S ++ +D+I++V + + LHKF L++K +++L ES + + L D PGG F
Sbjct: 127 SQDIPTDVIVEVGETIFSLHKFMLVAKSNYIRKLILES--NEGELTRIDLSDIPGGPSIF 300
Query: 83 ELCAKFCYGIQITLSPYNIVAARCAAEYLQMTEEVEKGNLIHKLEVFFNSCILHGWKDTI 142
E AKFCYG+ ++ +N+ RCAAE+LQMT++ + NL + E F +
Sbjct: 301 EKTAKFCYGVNFEITVHNVAVLRCAAEFLQMTDQYCENNLAGRTEEFLTQVAFFTLTGAV 480
Query: 143 VSLQTTKALHLWSEDLGITSRCIETIASKVLSHPTKVSLSHSHSRRVRDDISCNDTESLR 202
L++ + L +++D+ + RC+E +++K S S S
Sbjct: 481 TVLKSCRHLLPYADDINVVKRCVEAVSAKACSEANFPSRS-------------------- 600
Query: 203 IKSGSKGWWAEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNISKN--G 260
WW E+LA L ID + R + A+K + + AL Y R L ++ ++ G
Sbjct: 601 ----PPNWWTEELALLDIDFFARVIDAMKQ-RSAKALTVAAALITYTERALRDLVRDHTG 765
Query: 261 NRKKNVSLAESESNSDSASEITSKHRLLLESIV 293
N ++ +S+S SK R LLE+IV
Sbjct: 766 NGIRSSDPGDSDSR--------SKQRKLLEAIV 840
>TC218140
Length = 724
Score = 107 bits (267), Expect = 2e-23
Identities = 73/180 (40%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Frame = +1
Query: 467 LKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARA-ASSGG 525
LK HP ++KSE+KR+CR+++C+KLS EACMHA QNE LP+RVVVQVLFFEQ RA SSGG
Sbjct: 4 LKEHPGISKSEKKRICRLMNCRKLSAEACMHAVQNERLPMRVVVQVLFFEQLRATTSSGG 183
Query: 526 KVT-ELQSNIKALLT--THGIDPSKHTTTQLSSTTSIQGEDNWSVSG----FKSPKSKSS 578
T + +I+ALL +HG S T T E+ W G KS K +
Sbjct: 184 NGTPDHPGSIRALLPGGSHGSSRSTITNT----------EEEWDAVGTMEDIKSLKGELD 333
Query: 579 TLRM----KLAEEHDEFDENGLVNDDGIGRNSKFKSICALPTQPKKMLSKLWSTNRTATE 634
L++ A + ++ G N + + SK K + + KK++SK+WS+ + E
Sbjct: 334 ALKLSGGTSGASSRSDNNDGGKDNAEKVAA-SKMKGLMS-----KKIISKIWSSKERSGE 495
>TC233658 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23, partial
(17%)
Length = 657
Score = 104 bits (260), Expect = 1e-22
Identities = 47/105 (44%), Positives = 72/105 (67%)
Frame = +1
Query: 70 VQLPDFPGGVEAFELCAKFCYGIQITLSPYNIVAARCAAEYLQMTEEVEKGNLIHKLEVF 129
V FPGG EAFE+ AKFCYG++I L+P N+ A RCA E+L+MTE+ + NL+ K E F
Sbjct: 1 VTFTGFPGGSEAFEMAAKFCYGVKIDLTPSNVAALRCAGEFLEMTEDYSEDNLVSKTEGF 180
Query: 130 FNSCILHGWKDTIVSLQTTKALHLWSEDLGITSRCIETIASKVLS 174
+ +L KD++ +L++ +L +E+LGIT RC++++ S+ S
Sbjct: 181 LSQHVLKNLKDSVKTLKSCDSLMPMAENLGITQRCVDSVVSRASS 315
>TC234775 similar to UP|Q9FMF5 (Q9FMF5) Non-phototropic hypocotyl 3, partial
(16%)
Length = 499
Score = 103 bits (257), Expect = 2e-22
Identities = 53/108 (49%), Positives = 76/108 (70%)
Frame = +1
Query: 22 ISSEVSSDLIIQVRGSRYLLHKFPLLSKCLCLQRLCSESPPDSSHHQIVQLPDFPGGVEA 81
+++++ SD ++Q+ + + LHK+PL+S+ L R+ ES D ++IV + D PGG EA
Sbjct: 181 VATDIPSDFLVQIGEANFHLHKYPLVSRSGKLSRVIYESH-DPDLNKIV-IDDIPGGEEA 354
Query: 82 FELCAKFCYGIQITLSPYNIVAARCAAEYLQMTEEVEKGNLIHKLEVF 129
FEL AKFCYGI + L+ NI RCAAEYL+MTE++E+GNLI K E F
Sbjct: 355 FELAAKFCYGIAVDLTAGNISGLRCAAEYLEMTEDLEEGNLIFKAEAF 498
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,981,153
Number of Sequences: 63676
Number of extensions: 428051
Number of successful extensions: 2526
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 2482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2498
length of query: 636
length of database: 12,639,632
effective HSP length: 103
effective length of query: 533
effective length of database: 6,081,004
effective search space: 3241175132
effective search space used: 3241175132
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Medicago: description of AC119414.2