BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC119412.2 - phase: 0
(184 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC206105 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-in... 37 0.005
TC234057 similar to UP|Q9LSV7 (Q9LSV7) Gb|AAD21483.1, partial (3%) 33 0.058
TC206106 weakly similar to UP|Q7RK82 (Q7RK82) Maebl (Fragment), ... 33 0.076
TC206107 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-in... 33 0.076
BU763591 32 0.13
TC214476 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 32 0.13
TC216950 31 0.29
TC207919 similar to UP|Q6YBV9 (Q6YBV9) Cryptochrome 1, partial (... 31 0.38
CO985236 30 0.49
CF921229 30 0.49
TC204091 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1... 30 0.84
TC234387 29 1.1
TC229004 29 1.4
TC227496 similar to UP|Q7XA59 (Q7XA59) M355, partial (28%) 29 1.4
TC208876 UP|Q9ZPK4 (Q9ZPK4) Glutamyl-tRNA reductase, complete 29 1.4
TC215868 similar to UP|Q9LJ56 (Q9LJ56) Gb|AAD43149.1, partial (50%) 28 1.9
TC214054 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, p... 28 1.9
TC215822 similar to UP|Q9LW00 (Q9LW00) Arabidopsis thaliana geno... 28 2.4
TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%) 28 2.4
TC206354 28 2.4
>TC206105 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-infected
erythrocyte surface antigen, partial (5%)
Length = 858
Score = 37.0 bits (84), Expect = 0.005
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Frame = +1
Query: 32 IQSTHGKQENNSNTFEEVGKIVEEGVDDTEEDIILEECSTMKMVEELEPLHPEEFPQERP 91
++ T GK+E + EE ++ E ++ +E + EE +++EE + + E +E
Sbjct: 409 VEVTEGKKE--AEVIEEKKEV--EVTEEKKEIEVTEEKKEAEVIEEKKEVEVTEEKKEIE 576
Query: 92 YTEE---AETVENEEVMEVTEKEDRILIKEESMEEKGKKVNKVEID 134
TEE AE E ++ EVTE++ + + EE E + K E++
Sbjct: 577 VTEEKKEAEVKEEKKEGEVTEEKKEVEVTEEKKEAEVIVEEKKEVE 714
Score = 35.4 bits (80), Expect = 0.015
Identities = 27/113 (23%), Positives = 56/113 (48%)
Frame = +1
Query: 18 MEMMQEQIMDIQANIQSTHGKQENNSNTFEEVGKIVEEGVDDTEEDIILEECSTMKMVEE 77
++ +++ + + N + T K E K E + +E ++EE +++ EE
Sbjct: 301 LDELKKLVQEALNNHELTAPKPEPEKKKPAAEKKEEVEVTEGKKEAEVIEEKKEVEVTEE 480
Query: 78 LEPLHPEEFPQERPYTEEAETVENEEVMEVTEKEDRILIKEESMEEKGKKVNK 130
+ + E +E+ +EAE +E ++ +EVTE++ I + EE E + K+ K
Sbjct: 481 KKEI---EVTEEK---KEAEVIEEKKEVEVTEEKKEIEVTEEKKEAEVKEEKK 621
>TC234057 similar to UP|Q9LSV7 (Q9LSV7) Gb|AAD21483.1, partial (3%)
Length = 493
Score = 33.5 bits (75), Expect = 0.058
Identities = 31/136 (22%), Positives = 57/136 (41%)
Frame = +3
Query: 11 LKNLSFQMEMMQEQIMDIQANIQSTHGKQENNSNTFEEVGKIVEEGVDDTEEDIILEECS 70
+ N Q ++M++ NI ST + + NS + K+ DI +
Sbjct: 42 ISNFQLQNSYKDRELMNV--NIGSTEDETDMNSELDSDSDKL---------SDIFETDSD 188
Query: 71 TMKMVEELEPLHPEEFPQERPYTEEAETVENEEVMEVTEKEDRILIKEESMEEKGKKVNK 130
T V+E +PL+ +EF P + E + EE M ++ +K ++ME+
Sbjct: 189 TENFVKEEKPLYLDEF-DNFPEQSDGEMNDFEEHMR------QMSLKSKNMEKDDNLPKL 347
Query: 131 VEIDRIIDEICALFNK 146
E+D+I + + K
Sbjct: 348 DEVDKIFLQATSFLKK 395
>TC206106 weakly similar to UP|Q7RK82 (Q7RK82) Maebl (Fragment), partial (7%)
Length = 1040
Score = 33.1 bits (74), Expect = 0.076
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Frame = +2
Query: 40 ENNSNTFEEVGKIVEEGVDDTEEDIILEECSTMKMVEELEPLHP--EEFPQERPYTE--- 94
E +E+ ++V+E +++ E + + K EL+ L EE +E+ E
Sbjct: 572 EAQRKALDELKRLVQEALNNHE--LTAPKPEPEKKKTELKALEKKEEEVSEEKKEVEVTE 745
Query: 95 ---EAETVENEEVMEVTEKEDRILIKEESMEEKGKKVNK 130
EAE E ++ EVTE++ + + EE E +G + K
Sbjct: 746 EKKEAEVTEEKKEAEVTEEKKEVEVAEEKKEVEGTEEKK 862
>TC206107 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-infected
erythrocyte surface antigen, partial (4%)
Length = 650
Score = 33.1 bits (74), Expect = 0.076
Identities = 25/105 (23%), Positives = 52/105 (48%)
Frame = +1
Query: 18 MEMMQEQIMDIQANIQSTHGKQENNSNTFEEVGKIVEEGVDDTEEDIILEECSTMKMVEE 77
++ +++ + + N + T K E K E + +E ++EE +++ EE
Sbjct: 346 LDELKKLVQEALNNHELTAPKPEPEKKKPAAEKKEEVEVTEGKKEAEVIEEKKEVEVTEE 525
Query: 78 LEPLHPEEFPQERPYTEEAETVENEEVMEVTEKEDRILIKEESME 122
+ + E +E+ +EAE +E ++ +EVTE++ I + EE E
Sbjct: 526 KKEI---EVTEEK---KEAEVIEEKKEVEVTEEKKEIEVTEEKKE 642
>BU763591
Length = 389
Score = 32.3 bits (72), Expect = 0.13
Identities = 22/80 (27%), Positives = 41/80 (50%), Gaps = 3/80 (3%)
Frame = -1
Query: 58 DDTEEDIILEECSTMKMVEELEPLHPEEFPQERPYTEE---AETVENEEVMEVTEKEDRI 114
++ +E + EE +++EE + + E +E TEE AE E ++ EVTE++ +
Sbjct: 383 EEKKEIEVTEEKKKAEVIEEKKEVEVTEEKKEIEVTEEKKEAEVKEEKKEGEVTEEKKEV 204
Query: 115 LIKEESMEEKGKKVNKVEID 134
+ EE E + K E++
Sbjct: 203 EVTEEKKEAEVIVEEKKEVE 144
Score = 28.5 bits (62), Expect = 1.9
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Frame = -1
Query: 73 KMVEELEPLHPEEFPQERPYTEEAETVENEEVMEVTEKEDRILIKEESME----EKGKKV 128
K +E E E +E+ +E E E ++ +EVTE++ +KEE E E+ K+V
Sbjct: 374 KEIEVTEEKKKAEVIEEK---KEVEVTEEKKEIEVTEEKKEAEVKEEKKEGEVTEEKKEV 204
Query: 129 ----NKVEIDRIIDE 139
K E + I++E
Sbjct: 203 EVTEEKKEAEVIVEE 159
>TC214476 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (14%)
Length = 642
Score = 32.3 bits (72), Expect = 0.13
Identities = 25/74 (33%), Positives = 40/74 (53%), Gaps = 1/74 (1%)
Frame = -1
Query: 47 EEVGKIVEEGVDDTEEDIILE-ECSTMKMVEELEPLHPEEFPQERPYTEEAETVENEEVM 105
EEV +VE EE ++LE E + ++VE E + +E E A+ VE ++V
Sbjct: 594 EEVMVVVEA----KEEGVVLEVEVAKEEVVEVQEGVKVVVAKEEEVEVEVAKVVEVDQVA 427
Query: 106 EVTEKEDRILIKEE 119
EVT + +++KEE
Sbjct: 426 EVTVVVEVVVVKEE 385
Score = 28.1 bits (61), Expect = 2.4
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 99 VENEEVMEVTEKEDRILIKEESMEEKGKKVNKVEIDRIID 138
V EEV+EV E ++ KEE +E + KV VE+D++ +
Sbjct: 537 VAKEEVVEVQEGVKVVVAKEEEVEVEVAKV--VEVDQVAE 424
>TC216950
Length = 873
Score = 31.2 bits (69), Expect = 0.29
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Frame = +2
Query: 61 EEDIILEECSTMKMVEEL------EPLHPEEFPQE-RPYTEEAETVENEEVMEVTEKEDR 113
E ++ L E T K VEE E L EE E EE N+EV EKE
Sbjct: 212 EAELKLIEEETAKRVEEAIRKRVEESLKSEEVQVEIERRLEEGRKRLNDEVAAQLEKEKE 391
Query: 114 ILIKEESMEEKGKKVNKVEIDRIIDE 139
+ E +E+ + K +++R+++E
Sbjct: 392 AALIEAKQKEEQARKEKEDLERMLEE 469
>TC207919 similar to UP|Q6YBV9 (Q6YBV9) Cryptochrome 1, partial (12%)
Length = 437
Score = 30.8 bits (68), Expect = 0.38
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = +3
Query: 38 KQENNSNTFEEVGKIVEEGVDDTEEDIILEECSTMKMVEELEPLHPEEFPQERPYTEEAE 97
+QE S E G EEG+ D+ E + M+M E EP+ P R Y ++
Sbjct: 42 QQEAASRAAMENG--TEEGLGDSSESVPAAFPQDMQMEETHEPVRNNPLPVARRYQDQMV 215
Query: 98 TVENEEVMEVTEKEDRILIKEESMEEKGKKV 128
++ V E+E ++ + E +V
Sbjct: 216 PSITSSLLRVEEEETSSDLRHSAEESSRAEV 308
>CO985236
Length = 466
Score = 30.4 bits (67), Expect = 0.49
Identities = 29/118 (24%), Positives = 59/118 (49%), Gaps = 11/118 (9%)
Frame = -1
Query: 33 QSTHGKQENNSNTFEEVGKIVEEGVDDTEEDIILEECSTMKMVEE---------LEPLHP 83
++T K+E+ E K E+GV + +ED ++ S +K VEE +E
Sbjct: 424 EATEDKKEDGVEEVNEDRK--EDGVGEVKEDKEVDGVSCVKEVEEDGEVDGVKKVEDKKG 251
Query: 84 EEFPQERPYTEEAETVENEEVMEVTEKEDRILIKEESMEEKGKK--VNKVEIDRIIDE 139
+E + ++ EN+++ E TE ++ + + E+ +E+ +K V+ +E++ I E
Sbjct: 250 DELKEIEEDKKDDHISENDKMDEDTEIKETMEGEPENGKEESEKPVVDAMEVEGGIKE 77
>CF921229
Length = 680
Score = 30.4 bits (67), Expect = 0.49
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -3
Query: 94 EEAETVENEEVMEVTEKEDRILIKEESMEEKGKKVNK 130
+EAE +E ++ +EVTE++ I + EE E + K+ K
Sbjct: 675 KEAEVIEEKKEVEVTEEKKEIEVTEEKKEAEVKEEKK 565
Score = 28.9 bits (63), Expect = 1.4
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = -3
Query: 61 EEDIILEECSTMKMVEELEPLHPEEFPQERPYTEEAETVENEEVMEVTEKEDRILIKEES 120
+E ++EE +++ EE + + E +E+ +EAE E ++ EVTE++ + + EE
Sbjct: 675 KEAEVIEEKKEVEVTEEKKEI---EVTEEK---KEAEVKEEKKEGEVTEEKKEVEVTEEK 514
Query: 121 MEEKGKKVNKVEID 134
E + K E++
Sbjct: 513 KEAEVIVEEKKEVE 472
>TC204091 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
(70%)
Length = 2075
Score = 29.6 bits (65), Expect = 0.84
Identities = 24/103 (23%), Positives = 47/103 (45%)
Frame = +2
Query: 38 KQENNSNTFEEVGKIVEEGVDDTEEDIILEECSTMKMVEELEPLHPEEFPQERPYTEEAE 97
K EN +EEV + VEE ++ EE++ EE EE E
Sbjct: 101 KPENPPQEYEEVEEEVEE--EEVEEEVEEEE-------------------------EEEE 199
Query: 98 TVENEEVMEVTEKEDRILIKEESMEEKGKKVNKVEIDRIIDEI 140
E EE E E+E+ ++K++ +++ + + + I ++++ +
Sbjct: 200 EDEEEEEEEEEEEEENDVVKQQQQQQQDE--DDIPISKLLEPL 322
>TC234387
Length = 755
Score = 29.3 bits (64), Expect = 1.1
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Frame = +2
Query: 38 KQENNSNTFEEVGKIVEEGVDDTEEDIILEECSTMKMVEELEPLHPEEFPQERPYTEEAE 97
KQ+N N + +E V++TEE+ + + + + L EE +++ +E E
Sbjct: 251 KQQNQQNEPSLAQRHIEN-VNETEEN----KDDSERRKRKNSALSLEELYKKQHEEKEKE 415
Query: 98 TVENEEVMEVTEKE-DRILIKEESMEEK-------GKKVNKVEIDRIIDEI 140
+E E V+ V ++E ++ + ++M EK G+ V K I+ +++ I
Sbjct: 416 IMEREAVLRVKKEEREQAEARRKAMREKMLKKTRKGQPVMKYRIEHLLETI 568
>TC229004
Length = 930
Score = 28.9 bits (63), Expect = 1.4
Identities = 22/76 (28%), Positives = 36/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 60 TEEDIILEECSTMKMVEELEPLHPEEFPQE-RPYTEEAETVENEEVMEVTEKEDRILIKE 118
T ED + + M EELEPL Q P + + + E+V+ V K+ +I
Sbjct: 43 TSEDTERQRSTMMDETEELEPLFDYSRVQPLNPIDLDDDLDDYEDVICVDSKKRKISQAV 222
Query: 119 ESMEEKGKKVNKVEID 134
+ + GK+V V+I+
Sbjct: 223 GNEKTNGKRVTVVDIE 270
>TC227496 similar to UP|Q7XA59 (Q7XA59) M355, partial (28%)
Length = 688
Score = 28.9 bits (63), Expect = 1.4
Identities = 20/69 (28%), Positives = 41/69 (58%)
Frame = +2
Query: 55 EGVDDTEEDIILEECSTMKMVEELEPLHPEEFPQERPYTEEAETVENEEVMEVTEKEDRI 114
EG+DD ++D E + +++ EE EP+ ++ P++ T+EAE ++++KE
Sbjct: 443 EGLDDADDDGEEEHENDLEVTEEAEPV-LQKPPEQPVVTKEAE-------RQLSKKE--- 589
Query: 115 LIKEESMEE 123
+K++ +EE
Sbjct: 590 -LKKKGLEE 613
>TC208876 UP|Q9ZPK4 (Q9ZPK4) Glutamyl-tRNA reductase, complete
Length = 1896
Score = 28.9 bits (63), Expect = 1.4
Identities = 18/84 (21%), Positives = 39/84 (46%)
Frame = +1
Query: 57 VDDTEEDIILEECSTMKMVEELEPLHPEEFPQERPYTEEAETVENEEVMEVTEKEDRILI 116
VDD +E + + ++ E + + EE Q + + ETV + + + R+
Sbjct: 1195 VDDLKEVVAANKEDRLRKAMEAQAIIGEESKQFEAWRDSLETVPTIKKLRAYAERIRLAE 1374
Query: 117 KEESMEEKGKKVNKVEIDRIIDEI 140
E+ + + G +NK + R +D++
Sbjct: 1375 LEKCLGKMGDDINK-KTQRAVDDL 1443
>TC215868 similar to UP|Q9LJ56 (Q9LJ56) Gb|AAD43149.1, partial (50%)
Length = 1472
Score = 28.5 bits (62), Expect = 1.9
Identities = 27/129 (20%), Positives = 56/129 (42%), Gaps = 3/129 (2%)
Frame = +1
Query: 1 MINMQDTNQRLKNLSFQMEMMQEQIMDIQANIQSTHGKQENNSNTF--EEVGKIVE-EGV 57
M++ + RL+ ++ ++ +++ G ++ F E+V ++ E
Sbjct: 88 MVSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTEHN 267
Query: 58 DDTEEDIILEECSTMKMVEELEPLHPEEFPQERPYTEEAETVENEEVMEVTEKEDRILIK 117
+E+ EE VEE E P Q +P + T E+EE + E+ED+
Sbjct: 268 QSQQEEEEKEEKHQNDHVEEQEEDAPNNPEQSQPSDSKEVTDEDEEEEDEEEEEDKPKHA 447
Query: 118 EESMEEKGK 126
+++ + KG+
Sbjct: 448 KKAKKNKGR 474
>TC214054 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, partial (68%)
Length = 1306
Score = 28.5 bits (62), Expect = 1.9
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 73 KMVEELEPLHPEEFPQERPYTEEAETVENEEVMEVTEKEDRIL--IKEESMEEK 124
K E+ P P+E P E TEE E EE EK + +KEE+ E K
Sbjct: 325 KTTTEVAPEEPKEVPVE---TEEVVAKETEEEKPAEEKSEEKTEEVKEEAEEPK 477
>TC215822 similar to UP|Q9LW00 (Q9LW00) Arabidopsis thaliana genomic DNA,
chromosome 3, P1 clone: MSJ11, partial (23%)
Length = 1135
Score = 28.1 bits (61), Expect = 2.4
Identities = 27/102 (26%), Positives = 50/102 (48%), Gaps = 4/102 (3%)
Frame = +2
Query: 37 GKQENNSNTFEEVGKIVEEGVDDTEEDIILEECSTMKM-VEELEPLHP--EEFPQERPYT 93
GKQ N + E++ + ++ D EE+ + + + ++ +E++ H E ERP
Sbjct: 320 GKQLENGDKTEQIDEQAKKPDVDMEENDLNDTNNKLENDSDEIKNSHVNGENVIAERPEG 499
Query: 94 EEAETVENEEVMEVTEKEDRILIKEES-MEEKGKKVNKVEID 134
EEA+ E E +V E+ E+S + E K+ N+ + D
Sbjct: 500 EEAQKQEVEPAEKVAEEAANTAETEKSLLTELEKEKNEEKTD 625
>TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%)
Length = 1005
Score = 28.1 bits (61), Expect = 2.4
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Frame = +3
Query: 38 KQENNSNTFEEVGKIVEEGVDDTEEDIILEECSTMKMVEELEPLHPEEFPQERPYTEEAE 97
K++ + EE + E+G +D ED +E + K ++ E ++ +E+ EE E
Sbjct: 393 KKKEKKDKDEETDTLKEKGKNDEGED---DEGNKKKKKDKKEK--EKDHKKEKKDKEEGE 557
Query: 98 T-----------VENEEVMEVTEKEDRILIKEESMEEKGKKVNK 130
++ EE+ + EKED+ + ++EK KK +K
Sbjct: 558 KEDSKVEVSVRDIDIEEIKKEGEKEDKGKDGGKEVKEKKKKEDK 689
>TC206354
Length = 548
Score = 28.1 bits (61), Expect = 2.4
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 78 LEPLHPEEFPQERPYTEEAETVENEEVMEVTEKEDRILIKEESMEEKGKKVNKVEIDRI 136
LE +PE+ P+++ E+ K++ I + ESME KK+ ++EID +
Sbjct: 241 LEAENPEKLPKKK---------------EINPKDNHISFQCESMEPVEKKLKEMEIDYV 372
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,447,322
Number of Sequences: 63676
Number of extensions: 67281
Number of successful extensions: 378
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of query: 184
length of database: 12,639,632
effective HSP length: 91
effective length of query: 93
effective length of database: 6,845,116
effective search space: 636595788
effective search space used: 636595788
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Medicago: description of AC119412.2