BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33244.1 323 aa
(323 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CCSA_LOTJA (Q9BBP4) Cytochrome c biogenesis protein ccsA 654 0.0
CCSA_SPIOL (Q9M3J1) Cytochrome c biogenesis protein ccsA 482 e-136
CCSA_TOBAC (P12216) Cytochrome c biogenesis protein ccsA 474 e-133
CCSA_OENHO (Q9MTI2) Cytochrome c biogenesis protein ccsA 471 e-133
CCSA_ARATH (P56770) Cytochrome c biogenesis protein ccsA 467 e-131
CCSA_ORYSA (P12215) Cytochrome c biogenesis protein ccsA 451 e-126
CCSA_MAIZE (P46659) Cytochrome c biogenesis protein ccsA 447 e-125
CCSA_WHEAT (P58266) Cytochrome c biogenesis protein ccsA 432 e-121
CCSA_PINTH (P41650) Cytochrome c biogenesis protein ccsA 344 1e-94
CCSA_MARPO (P12214) Cytochrome c biogenesis protein ccsA 317 3e-86
CCSA_ANTFO (Q85A51) Cytochrome c biogenesis protein ccsA 280 3e-75
CCSA_ODOSI (P49523) Cytochrome c biogenesis protein ccsA 263 6e-70
CCSA_MESVI (Q9MUM3) Cytochrome c biogenesis protein ccsA 252 1e-66
CCSA_PORPU (P51369) Cytochrome c biogenesis protein ccsA 250 4e-66
CCSA_CHLVU (P56315) Cytochrome c biogenesis protein ccsA 244 2e-64
CCSA_CYAPA (P48257) Cytochrome c biogenesis protein ccsA 241 1e-63
CCSA_CHLRE (P48269) Cytochrome c biogenesis protein ccsA 241 1e-63
CCSA_GUITH (P22554) Cytochrome c biogenesis protein ccsA 240 4e-63
CCSA_GALSU (P31564) Cytochrome c biogenesis protein ccsA 239 5e-63
CCSA_CYACA (O19901) Cytochrome c biogenesis protein ccsA 194 3e-49
>CCSA_LOTJA (Q9BBP4) Cytochrome c biogenesis protein ccsA
Length = 323
Score = 654 bits (1688), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW
Sbjct: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE
Sbjct: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF
Sbjct: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG
Sbjct: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII
Sbjct: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
Query: 301 WICYFGVNLLGIGLHNYGSFTSN 323
WICYFGVNLLGIGLHNYGSFTSN
Sbjct: 301 WICYFGVNLLGIGLHNYGSFTSN 323
>CCSA_SPIOL (Q9M3J1) Cytochrome c biogenesis protein ccsA
Length = 323
Score = 482 bits (1241), Expect = e-136
Identities = 240/323 (74%), Positives = 271/323 (83%), Gaps = 6/323 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFSTLEHILTHISFS VS+VI++HLITL VN+IVG Y+S +KGM++TF CITGLL+TRW
Sbjct: 1 MIFSTLEHILTHISFSTVSVVITLHLITLLVNEIVGLYNSLEKGMLVTFFCITGLLVTRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRF-KKQKNDLSTIIAPSVIFTQGFATSGLLT 119
+ H P SDLYESLIFLSW F + +M+P F KK+KN L+ I APS IFTQGFATSGLLT
Sbjct: 61 VYWKHFPLSDLYESLIFLSWSFYLIHMIPSFLKKEKNSLNVITAPSAIFTQGFATSGLLT 120
Query: 120 EMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQ-ELIPILGKSKRL 178
EMHQS ILVPALQS WLMMHVSMM+LGYAALL GSLLSV +L+I FQ +LI + K K L
Sbjct: 121 EMHQSGILVPALQSQWLMMHVSMMVLGYAALLGGSLLSVTLLIIIFQKDLIQVFDKRKHL 180
Query: 179 SFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLT 238
L ESF + EI+YIN E++N+++ S S RNYYR Q I+QLD W YR+ISLGFIFLT
Sbjct: 181 --LNESFFFGEIQYIN--EKSNIVQNASPSYVRNYYRSQLIEQLDHWSYRVISLGFIFLT 236
Query: 239 IGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFL 298
IGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLH R NK L G NS+IVA IGFL
Sbjct: 237 IGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHIRTNKNLRGANSAIVAFIGFL 296
Query: 299 IIWICYFGVNLLGIGLHNYGSFT 321
IIWICYFGVNLLGIGLH+YGSFT
Sbjct: 297 IIWICYFGVNLLGIGLHSYGSFT 319
>CCSA_TOBAC (P12216) Cytochrome c biogenesis protein ccsA
Length = 313
Score = 474 bits (1219), Expect = e-133
Identities = 237/322 (73%), Positives = 264/322 (81%), Gaps = 12/322 (3%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFSTLEHILTHISFS+VSIVI+IHLIT V++IV YDSS+KG+I+TF CITGLL+TRW
Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITFLVDEIVKLYDSSEKGIIVTFFCITGLLVTRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P SDLYESLIFLSW FS+ +++P FKK LS I PS IFTQGFATSG+LTE
Sbjct: 61 ISSGHFPLSDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAIFTQGFATSGILTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
+HQSVILVPALQS WL+MHVSMMILGYAALLCGSLLSVA+LVITF++ + KS F
Sbjct: 121 IHQSVILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRQLFYKSN--GF 178
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L ESF E NVL+ TSF S +NYYR Q IQQLD W YR+ISLGF FLTIG
Sbjct: 179 LNESFFLGE----------NVLQNTSFFSAKNYYRSQLIQQLDYWSYRVISLGFTFLTIG 228
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITW +FAIYLH+R N+ L G NS+IVASIGFLII
Sbjct: 229 ILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNRNLRGANSAIVASIGFLII 288
Query: 301 WICYFGVNLLGIGLHNYGSFTS 322
WICYFGVNLLGIGLH+YGSF S
Sbjct: 289 WICYFGVNLLGIGLHSYGSFPS 310
>CCSA_OENHO (Q9MTI2) Cytochrome c biogenesis protein ccsA
Length = 319
Score = 471 bits (1213), Expect = e-133
Identities = 233/320 (72%), Positives = 269/320 (83%), Gaps = 4/320 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIF TLEHILTHISFS+VSI I+I LITL V++I+G YDSS+KG+I TFLCITGLL+TRW
Sbjct: 1 MIFYTLEHILTHISFSLVSIGITIFLITLSVDEIIGLYDSSEKGVIGTFLCITGLLVTRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
+SGH P S+LYESL+FLSW F+I +M P FKKQK+ + TI + S IFTQG TSGLL+E
Sbjct: 61 AYSGHFPLSNLYESLLFLSWSFAIIHMFPYFKKQKSYVRTITSSSTIFTQGLVTSGLLSE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
M QS ILVPALQS WLMMHVSMM+LGYAALLCGSLLSVA+LVITF++ + I K K +F
Sbjct: 121 MQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKK--AF 178
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L +SF + EI+Y NE +NVL TSF S +NYYR Q IQQLDRW RIISLGFIFLTIG
Sbjct: 179 LKDSFSFVEIQY--RNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIG 236
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITWT+FAIYLH+R N + +NS+IVA +GF+II
Sbjct: 237 ILSGAVWANEAWGSYWNWDPKETWAFITWTMFAIYLHTRTNPNFQSVNSAIVAFLGFIII 296
Query: 301 WICYFGVNLLGIGLHNYGSF 320
WICYFGVNLLGIGLH+YGSF
Sbjct: 297 WICYFGVNLLGIGLHSYGSF 316
>CCSA_ARATH (P56770) Cytochrome c biogenesis protein ccsA
Length = 328
Score = 467 bits (1201), Expect = e-131
Identities = 236/330 (71%), Positives = 273/330 (82%), Gaps = 9/330 (2%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVN--QIVGFYDSSKKGMIITFLCITGLLIT 58
MIFS LEHILTHISFSVVSIV++I+ +TL VN +I+GF+DSS KG+IITF ITGLL+T
Sbjct: 1 MIFSILEHILTHISFSVVSIVLTIYFLTLLVNLDEIIGFFDSSDKGIIITFFGITGLLLT 60
Query: 59 RWFFSGHLPFSDLYESLIFLSWGFSIFYMVPRF-KKQKNDLSTIIAPSVIFTQGFATSGL 117
RW +SGH P S+LYESLIFLSW FSI +MV F KKQ+N L+TI APSVIF QGFATSGL
Sbjct: 61 RWIYSGHFPLSNLYESLIFLSWAFSIIHMVSYFNKKQQNKLNTITAPSVIFIQGFATSGL 120
Query: 118 LTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKS-- 175
L +M QS ILVPALQS WLMMHVSMMILGY ALLCGSLLS+A+LVITF+++ P K
Sbjct: 121 LNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVGPTFWKKNI 180
Query: 176 KRLSFLYESFDYAEIKYINMNERNNVL--RKTSFSSYRNYYRYQFIQQLDRWGYRIISLG 233
K+ L E F + + YIN ERN++L + +FS RNYYRYQ IQQLD W +RIISLG
Sbjct: 181 KKNFLLNELFSFDVLYYIN--ERNSILLQQNINFSFSRNYYRYQLIQQLDFWSFRIISLG 238
Query: 234 FIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVA 293
FIFLT+GILSGAVWANE WGSYWNWDPKETWAFITWTIFAIYLH + N+ + G+NS+IVA
Sbjct: 239 FIFLTVGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVRGINSAIVA 298
Query: 294 SIGFLIIWICYFGVNLLGIGLHNYGSFTSN 323
IGF++IWICYFGVNLLGIGLH+YGSFTSN
Sbjct: 299 LIGFILIWICYFGVNLLGIGLHSYGSFTSN 328
>CCSA_ORYSA (P12215) Cytochrome c biogenesis protein ccsA
Length = 321
Score = 451 bits (1159), Expect = e-126
Identities = 217/321 (67%), Positives = 255/321 (78%), Gaps = 3/321 (0%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
M+F+TLEHILTHISFS +SIVI+IHLITL V ++ G DSS+KGMI TF CITG L++RW
Sbjct: 1 MLFATLEHILTHISFSTISIVITIHLITLLVRELGGLRDSSEKGMIATFFCITGFLVSRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P S+LYESLIFLSW I +M+P+ + KNDLSTI PS I TQGFATSGLLTE
Sbjct: 61 ASSGHFPLSNLYESLIFLSWALYILHMIPKIQNSKNDLSTITTPSTILTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQS WLMMHVSMM+L YA LLCGSLLS A+L+I F++ + K K+ +
Sbjct: 121 MHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLMIRFRKNLDFFSKKKK-NV 179
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L ++F + EI+Y + + L+ T F + NYY+YQ I++LD W YR+ISLGF LTIG
Sbjct: 180 LSKTFFFNEIEY--FYAKRSALKSTFFPLFPNYYKYQLIERLDSWSYRVISLGFTLLTIG 237
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
IL GAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSR N +G S+ VASIGFLII
Sbjct: 238 ILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTKSAFVASIGFLII 297
Query: 301 WICYFGVNLLGIGLHNYGSFT 321
WICYFG+NLLGIGLH+YGSFT
Sbjct: 298 WICYFGINLLGIGLHSYGSFT 318
>CCSA_MAIZE (P46659) Cytochrome c biogenesis protein ccsA
Length = 321
Score = 447 bits (1149), Expect = e-125
Identities = 214/321 (66%), Positives = 254/321 (78%), Gaps = 4/321 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
M+F+TLEHILTHISFS +SIVI+IHLITL V ++ G DSS+KGMI TF ITG L++RW
Sbjct: 1 MLFATLEHILTHISFSTISIVITIHLITLLVRELRGLRDSSEKGMIATFFSITGFLVSRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P S+LYESLIFLSW I + +P+ + KNDLSTI PS I TQGFATSGLLTE
Sbjct: 61 VSSGHFPLSNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQS WLMMHVSMM+L YA LLCGSLLS A+L+I F++ K +
Sbjct: 121 MHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRKNFDFFSLKKNV-- 178
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
++F ++EI+Y + + + L+ TSF + NYY+YQ ++LD W YR+ISLGF LT+G
Sbjct: 179 FLKTFFFSEIEY--LYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVG 236
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
IL GAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKN +G NS++VASIGFLII
Sbjct: 237 ILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNPNWKGTNSALVASIGFLII 296
Query: 301 WICYFGVNLLGIGLHNYGSFT 321
WICYFG+NLLGIGLH+YGSFT
Sbjct: 297 WICYFGINLLGIGLHSYGSFT 317
>CCSA_WHEAT (P58266) Cytochrome c biogenesis protein ccsA
Length = 322
Score = 432 bits (1112), Expect = e-121
Identities = 209/321 (65%), Positives = 251/321 (78%), Gaps = 3/321 (0%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
M+F+TLEHILTHISFS +SIVI+IHLITL V ++ G DSS+KGMI+TF ITG L++RW
Sbjct: 1 MLFATLEHILTHISFSTISIVITIHLITLLVRELGGLRDSSEKGMIVTFFSITGFLVSRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P S+LYESLI LSW I + +P+ + KNDLSTI PS I TQGFATSGLLTE
Sbjct: 61 ASSGHFPLSNLYESLISLSWALYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQS WLMMHVSMM+L YA LL G LS AIL+I F+ K K+ +
Sbjct: 121 MHQSTILVPALQSQWLMMHVSMMLLSYATLLGGPPLSAAILIIRFRNNFHFFSKKKK-NV 179
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L ++F +++IKY + + L++TS S+ NYY+YQ ++LD W YR+ISLGF LT G
Sbjct: 180 LNKTFLFSDIKY--FYAKRSALKRTSVPSFPNYYKYQLTERLDSWSYRVISLGFTLLTGG 237
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
IL GAVWANEAWG+YWNWDPKETWAFITWTIFAIYLHSR + +G NS+++ASIGFLII
Sbjct: 238 ILGGAVWANEAWGAYWNWDPKETWAFITWTIFAIYLHSRTHPNWKGTNSALIASIGFLII 297
Query: 301 WICYFGVNLLGIGLHNYGSFT 321
WICYFG+NLLGIGLH+YGSFT
Sbjct: 298 WICYFGINLLGIGLHSYGSFT 318
>CCSA_PINTH (P41650) Cytochrome c biogenesis protein ccsA
Length = 320
Score = 344 bits (883), Expect = 1e-94
Identities = 178/324 (54%), Positives = 224/324 (68%), Gaps = 14/324 (4%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIF TLEHIL HISFS++ +V I+ TL V +I G S KGMI+TFLC TGLLI RW
Sbjct: 1 MIFITLEHILAHISFSLILVVTLIYWGTL-VYRIEGLSSSGGKGMIVTFLCTTGLLINRW 59
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKND-LSTIIAPSVIFTQGFATSGLLT 119
+SGHLP S+LYES +FLSW S+F+++ + + + L I APS + T GFAT GL
Sbjct: 60 LYSGHLPLSNLYESFMFLSWSSSVFHILLEVRSRDDRWLGAITAPSAMLTHGFATLGLPE 119
Query: 120 EMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLS 179
EM +S +LVPALQSHW MMHVSM++ YA LLCGSL S+A+LVI + G ++++
Sbjct: 120 EMQRSGMLVPALQSHWSMMHVSMILFSYATLLCGSLASIALLVI-------MSGVNRQVI 172
Query: 180 F-----LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGF 234
F L+ + + ++ + L+ T + S NY + Q I+QLD W YR I LGF
Sbjct: 173 FGAMDNLFSRAILPNENFYSHEKQKSDLQYTVYFSSTNYRKCQLIKQLDHWSYRAIGLGF 232
Query: 235 IFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVAS 294
TIG LSGA+WANEAWGSYW+WDPKETWA ITWTIFAIYLH+R NK +G +IVAS
Sbjct: 233 SLSTIGTLSGAIWANEAWGSYWSWDPKETWALITWTIFAIYLHTRMNKGWQGEEPAIVAS 292
Query: 295 IGFLIIWICYFGVNLLGIGLHNYG 318
+GF I+WI Y GVNLLGIGLH+YG
Sbjct: 293 LGFFIVWIRYLGVNLLGIGLHSYG 316
>CCSA_MARPO (P12214) Cytochrome c biogenesis protein ccsA
Length = 320
Score = 317 bits (812), Expect = 3e-86
Identities = 166/320 (51%), Positives = 210/320 (64%), Gaps = 5/320 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
M F TLE IL H SF ++ V I+ I + M I IT L+ RW
Sbjct: 1 MPFITLERILAHTSFFLLFFVTFIYWGKFLYINIKPITILGEISMKIACFFITTFLLIRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P S+LYES +FLSW F++ +++ K + L I APS + T GFAT L E
Sbjct: 61 SSSGHFPLSNLYESSMFLSWSFTLIHLILENKSKNTWLGIITAPSAMLTHGFATLSLPKE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITF--QELIPILGKSKRL 178
M +SV LVPALQSHWLMMHV+MM+L Y+ LLCGSLL++ IL+IT Q+ +PIL +
Sbjct: 121 MQESVFLVPALQSHWLMMHVTMMMLSYSTLLCGSLLAITILIITLTKQKNLPIL--TSYF 178
Query: 179 SFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLT 238
+F + SF + + NE + + FS + N+ ++Q I++LD W YR+ISLGF LT
Sbjct: 179 NFPFNSFIFKNLLQPMENEILSYKTQKVFS-FINFRKWQLIKELDNWSYRVISLGFPLLT 237
Query: 239 IGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFL 298
IGILSGAVWANEAWGSYWNWDPKETWA ITW IFAIYLH+R K +G +I+AS+GF
Sbjct: 238 IGILSGAVWANEAWGSYWNWDPKETWALITWLIFAIYLHTRMIKGWQGKKPAIIASLGFF 297
Query: 299 IIWICYFGVNLLGIGLHNYG 318
I+WICY GVNLLG GLH+YG
Sbjct: 298 IVWICYLGVNLLGKGLHSYG 317
>CCSA_ANTFO (Q85A51) Cytochrome c biogenesis protein ccsA
Length = 339
Score = 280 bits (716), Expect = 3e-75
Identities = 162/338 (47%), Positives = 204/338 (59%), Gaps = 22/338 (6%)
Query: 1 MIFSTLEHILTHISFSV--VSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLIT 58
MI LEHIL HISF + ++ ++ I N+ +G K +II ++CITGLL+T
Sbjct: 1 MILINLEHILAHISFFLPFLATLVFWGRIVCIDNKRIG--SLGNKSIIIAYICITGLLLT 58
Query: 59 RWFFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLL 118
RWF S HL S+LYES +FLSW F + ++V + + L II + T GFAT GL
Sbjct: 59 RWFHSRHLLLSNLYESFMFLSWSFCLIHIVSEIGSKNDWLGIIIVLIAMLTHGFATVGLP 118
Query: 119 TEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQEL--IPILG--- 173
EM QS +LVPALQSHWL+MHVSMMI YA L CGSLL +A+L+ T + PIL
Sbjct: 119 IEMQQSTVLVPALQSHWLIMHVSMMIPSYATLPCGSLLVIALLITTLNKNKNFPILKFNV 178
Query: 174 KSKRLSFLYESFDY-----AEIKYINM-------NERNNVLRKTSFSSYR-NYYRYQFIQ 220
S S + E Y +I N N+ NN K +F S + + Q Q
Sbjct: 179 NSFIWSLILEKKFYLGGSGGDISSRNSSSGNGSDNDSNNNNNKKTFHSLSIDCRKLQLTQ 238
Query: 221 QLDRWGYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRK 280
QLD W YRIISLG +FLTIGILSGAVW NEAWGSYW+WDPKETWA ITW + AI++H R
Sbjct: 239 QLDYWSYRIISLGSLFLTIGILSGAVWVNEAWGSYWSWDPKETWALITWLLSAIHIHIRM 298
Query: 281 NKKLEGLNSSIVASIGFLIIWICYFGVNLLGIGLHNYG 318
+ +G +I+AS G I+W Y GVN GLH+YG
Sbjct: 299 IRGWQGEKPAIIASSGSSIVWFRYLGVNSPEKGLHSYG 336
>CCSA_ODOSI (P49523) Cytochrome c biogenesis protein ccsA
Length = 312
Score = 263 bits (671), Expect = 6e-70
Identities = 137/321 (42%), Positives = 195/321 (60%), Gaps = 15/321 (4%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITL-FVNQIVGFYDSSKKGMIITFLCITGLLITR 59
M + ++++ +++ F ++ ++I+ I+L F K I+ + + +L +R
Sbjct: 1 MDWDIIQNLSSNLVFGILLFAMTIYWISLSFFKWTKNLSQVGKISAIVANILLFFILGSR 60
Query: 60 WFFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLT 119
W +G+ P S+LYESL+FL+W Y+ FK + + I+ P + GFA L
Sbjct: 61 WIVAGYFPLSNLYESLLFLTWTLLTIYLYVEFKTKSKLVGAILIPVALLINGFANLTLSV 120
Query: 120 EMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVIT-FQEL-IPILGKSKR 177
+M +S LVPALQS+WLM+HVSMM+L Y L+ GSLL + LVI+ +Q++ + IL +S
Sbjct: 121 DMQKSSPLVPALQSNWLMLHVSMMMLSYGTLIMGSLLCILFLVISKYQDIDLQILDESS- 179
Query: 178 LSFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFL 237
L DY E K + ++ + L K + +Q LD W YRII LGF FL
Sbjct: 180 LPLYNIMLDYYEAKLFSPSDEVSELGKL-----------KLLQSLDNWSYRIIGLGFPFL 228
Query: 238 TIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGF 297
TIGI++G VWANEAWGSYW+WDPKETWA ITW +FA YLHSR K EG ++I+ +GF
Sbjct: 229 TIGIIAGGVWANEAWGSYWSWDPKETWALITWIVFATYLHSRITKGWEGKKTAILGGLGF 288
Query: 298 LIIWICYFGVNLLGIGLHNYG 318
+IWICY GVN LG GLH+YG
Sbjct: 289 FVIWICYLGVNFLGKGLHSYG 309
>CCSA_MESVI (Q9MUM3) Cytochrome c biogenesis protein ccsA
Length = 305
Score = 252 bits (643), Expect = 1e-66
Identities = 139/318 (43%), Positives = 196/318 (60%), Gaps = 21/318 (6%)
Query: 6 LEHILTHISFSVVSIVISIH-LITLFV-NQIVGFYDSSKKGMIITFLCITGLLITRWFFS 63
+E L + SF+++ I + I+ + +F N I+ + + G++ + + LL RWF S
Sbjct: 6 IETYLANASFALLLITMLIYGMKAIFTKNNILQLFGTL--GILFSNFLVALLLSIRWFDS 63
Query: 64 GHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTEMHQ 123
H P S++YESL+FL W F+ F+++ Q N + I P + FAT L +M
Sbjct: 64 HHFPLSNMYESLMFLCWCFTFFHLLIEKYIQINFIGFITVPIAMLVNAFATFFLPLDMQH 123
Query: 124 SVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSFLYE 183
S LVPAL+S+WL+MHV++M+ YAAL+ GSLLS+A L +T+ + I + G S
Sbjct: 124 STPLVPALKSNWLIMHVTIMMASYAALILGSLLSIAFLFLTYNKQIELQGNS-------- 175
Query: 184 SFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIGILS 243
I IN +E N+ + T ++ + + +D YR I +GF LTIGI+S
Sbjct: 176 ------IGNIN-DEMNSYI--TIDIEFQKNESIELAKLIDNLSYRTIGIGFPLLTIGIIS 226
Query: 244 GAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLIIWIC 303
GAVWAN+AWGSYW+WDPKETWA ITW IFAIYLH+R K +G +IVA IGF+I+W+C
Sbjct: 227 GAVWANDAWGSYWSWDPKETWALITWIIFAIYLHTRITKGWQGRRPAIVAFIGFVIVWVC 286
Query: 304 YFGVNLLGIGLHNYGSFT 321
Y GVNLLG GLH+YG FT
Sbjct: 287 YLGVNLLGQGLHSYGWFT 304
>CCSA_PORPU (P51369) Cytochrome c biogenesis protein ccsA
Length = 319
Score = 250 bits (638), Expect = 4e-66
Identities = 135/327 (41%), Positives = 197/327 (59%), Gaps = 20/327 (6%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLIT-- 58
M +++ + +F + + ++ +L +I G +K +IT L L +T
Sbjct: 1 MNLEMMQNSCVNFAFGGLLTAMLVYWSSLAFPRISGL---NKLAALITLLVNIALALTLS 57
Query: 59 -RWFFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGL 117
RWF +G+ P S+LYESL+FL+WG + ++ K + + + P +F FA+ L
Sbjct: 58 SRWFANGYFPLSNLYESLLFLAWGLTFVHLFIESKTKSRLIGAVSIPVAMFVTAFASLAL 117
Query: 118 LTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKR 177
EM ++ LVPAL+S+WLMMHVS+M++ Y+ L+ GSLLS+ L+IT + I + G S
Sbjct: 118 PIEMQKASPLVPALKSNWLMMHVSIMMISYSILILGSLLSILFLIITRGQDINLKGSSVG 177
Query: 178 L-SFLYESFDY-AEIKYIN----MNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIIS 231
S+ +S D + N + E++N+L ++ R ++ +D YRII
Sbjct: 178 TGSYTVKSLDSNPSFAFSNPSGIVQEQSNMLINST--------RMNLLESIDNLSYRIIG 229
Query: 232 LGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSI 291
LGF LTIGI++GAVWANEAWGSYW+WDPKETWA ITW IFA YLH R K +G +I
Sbjct: 230 LGFPLLTIGIVAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHCRITKSWQGKRPAI 289
Query: 292 VASIGFLIIWICYFGVNLLGIGLHNYG 318
+AS+GFL++WICY GVN LG GLH+YG
Sbjct: 290 LASVGFLVVWICYLGVNFLGKGLHSYG 316
>CCSA_CHLVU (P56315) Cytochrome c biogenesis protein ccsA
Length = 315
Score = 244 bits (624), Expect = 2e-64
Identities = 132/322 (40%), Positives = 184/322 (56%), Gaps = 27/322 (8%)
Query: 6 LEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRWFFSGH 65
+E+ L++ F ++ + + + + F + G C+T LI RW SGH
Sbjct: 8 IENFLSNSCFLILFLTTVYYWLKIGFGGKSSFSFTGLTGYGSALCCLTLQLILRWVDSGH 67
Query: 66 LPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTEMHQSV 125
P S+LYESLIFL+W + Y+ + L + +P+++ F L TE+ QS
Sbjct: 68 FPLSNLYESLIFLAWCLLLLYIYIEVSTKTLFLGVLTSPAILCLVAFTDFSLPTELQQST 127
Query: 126 ILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSFLYESF 185
LVPALQS+WL+MHV++MI YAALL G +++A LV++ F+ +F
Sbjct: 128 PLVPALQSNWLVMHVTVMIASYAALLLGCFIAIAYLVLS-------------KFFIKTTF 174
Query: 186 DYAEIKYINMNERNNVLRKTSFSSYR---------NYYRYQFIQQLDRWGYRIISLGFIF 236
A + + +N VLR+ SF + N +F+ LD YR I +GF F
Sbjct: 175 VTAPL-----SSQNTVLRQESFLEEKQKTDIVFEKNDKNLKFLFFLDNLSYRTIGIGFCF 229
Query: 237 LTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIG 296
LT+GILSGA+WANE WG+YW+WDPKETWAFITW FA YLHSR G ++VAS G
Sbjct: 230 LTLGILSGAIWANETWGNYWSWDPKETWAFITWLTFACYLHSRLVGGWTGSKPALVASFG 289
Query: 297 FLIIWICYFGVNLLGIGLHNYG 318
FL++W+CY GVNLLG GLH+YG
Sbjct: 290 FLVVWVCYLGVNLLGQGLHSYG 311
>CCSA_CYAPA (P48257) Cytochrome c biogenesis protein ccsA
Length = 322
Score = 241 bits (616), Expect = 1e-63
Identities = 144/339 (42%), Positives = 198/339 (57%), Gaps = 37/339 (10%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLI-TLFVNQIVGFYDSSKKGMIITFLCITGLLITR 59
M STL+ IL SF + I+ + +F N + ++ S GM+I + I LLITR
Sbjct: 1 MNISTLQLILETFSFFIYFILTFLFFAQAIFKNHWLKTFNFS--GMLIANVSIFLLLITR 58
Query: 60 WFFSGHLPFSDLYESLIFLSWGFSIFYMV-----PRFKKQKNDLSTIIAPSVIFTQGFAT 114
W +G+ P S+LYESL FL WG + ++ R + N +S ++ V GF
Sbjct: 59 WITAGYFPISNLYESLFFLVWGLNTIWLFLYKNNMRIQLLDNSVSLLLTLLV----GFLH 114
Query: 115 SGLLTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGK 174
L EM + LVPAL+S+WLMMHVS+M++ YA L+ GSLLS+ L +
Sbjct: 115 FILPQEMREISPLVPALKSNWLMMHVSVMMISYATLMIGSLLSIIYLYFLY--------- 165
Query: 175 SKRLSFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYR---YQFI----------QQ 221
R+ L + + N N N+++ SF++ N + YQ + ++
Sbjct: 166 --RVDKLLNKINAVNLMTSNQNS-NSLIYNLSFNTLLNSSKSMEYQILLKDLSLIKLSKR 222
Query: 222 LDRWGYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKN 281
LD YR+I+ GF LTIGI++GAVWANEAWGSYW+WDPKETWA ITW IFAIYLH+R
Sbjct: 223 LDNLSYRLITFGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAIYLHTRII 282
Query: 282 KKLEGLNSSIVASIGFLIIWICYFGVNLLGIGLHNYGSF 320
K +G +++VAS+GF IIWICY GVNLLG G+H+YG F
Sbjct: 283 KGWQGKKAAMVASLGFFIIWICYLGVNLLGKGIHSYGWF 321
>CCSA_CHLRE (P48269) Cytochrome c biogenesis protein ccsA
Length = 353
Score = 241 bits (616), Expect = 1e-63
Identities = 130/279 (46%), Positives = 168/279 (59%), Gaps = 44/279 (15%)
Query: 45 MIITFLCITGLLITRWFFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQ---KNDLSTI 101
M ++ L + LL+ RW SGH P S+LYESL+FL+W + Y++ + L ++
Sbjct: 115 MGVSNLLLVLLLLVRWEKSGHFPLSNLYESLMFLAWCCTFLYLLYCTSFTLLVEKMLGSL 174
Query: 102 IAPSVIFTQGFATSGLLTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAIL 161
IAP + FAT L EM Q+ LVPALQS+WLMMHV++MI+ YA L+ GSLLS+ L
Sbjct: 175 IAPCSLLMNAFATFSLPKEMQQASPLVPALQSNWLMMHVTVMIISYATLIIGSLLSILFL 234
Query: 162 VITFQELIPILGKSKRLSFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQ 221
++ K+ +K + Y N FI
Sbjct: 235 IL--------------------------FKH----------KKGTPKKYDN-----FINN 253
Query: 222 LDRWGYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKN 281
LD YRII LGF FLTIGILSGAVWANEAWGSYW+WDPKETWA +TW +FAIYLH+R
Sbjct: 254 LDALSYRIIGLGFPFLTIGILSGAVWANEAWGSYWSWDPKETWALLTWLVFAIYLHTRLT 313
Query: 282 KKLEGLNSSIVASIGFLIIWICYFGVNLLGIGLHNYGSF 320
K EG +I+A++GFL++W CY GVNL+G GLH+YG F
Sbjct: 314 KGWEGEKPAIIAAVGFLVVWFCYLGVNLIGEGLHSYGFF 352
>CCSA_GUITH (P22554) Cytochrome c biogenesis protein ccsA
Length = 301
Score = 240 bits (612), Expect = 4e-63
Identities = 124/309 (40%), Positives = 184/309 (59%), Gaps = 26/309 (8%)
Query: 12 HISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRWFFSGHLPFSDL 71
+I+F + I + + + L +I + I+ + IT +L TRW SG+ P S+L
Sbjct: 14 NITFLTLLISLISYWLGLIFKKIKNVFYIGYGSTILACITITIILGTRWIESGYFPLSNL 73
Query: 72 YESLIFLSWG--FSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTEMHQSVILVP 129
YESL+FL+WG FS Y+ +K + I++P +F F+T L +M ++ LVP
Sbjct: 74 YESLMFLTWGLLFSAIYL--EYKTNLYLIGAIVSPISLFIVSFSTLSLPQDMQKAAPLVP 131
Query: 130 ALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSFLYESFDYAE 189
AL+S+WLMMHVS+M+L Y+ L+ GSLL++ LV+ K+++ + F +A
Sbjct: 132 ALKSNWLMMHVSVMMLSYSTLIIGSLLAILYLVLI---------KAQQKKHSLKDFAFAN 182
Query: 190 IKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIGILSGAVWAN 249
+++ +F N + ++ LD YR I GF LTIGI++GAVWAN
Sbjct: 183 LEF-------------TFPKSTNSTNFNLLETLDNLSYRTIGFGFPLLTIGIIAGAVWAN 229
Query: 250 EAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLIIWICYFGVNL 309
EAWG+YW+WDPKETWA ITW +FA YLH+R K G + +A++GF+++WICY GVN
Sbjct: 230 EAWGTYWSWDPKETWALITWLVFAAYLHARITKSWTGERPAYLAALGFVVVWICYLGVNF 289
Query: 310 LGIGLHNYG 318
LG GLH+YG
Sbjct: 290 LGKGLHSYG 298
>CCSA_GALSU (P31564) Cytochrome c biogenesis protein ccsA
Length = 306
Score = 239 bits (611), Expect = 5e-63
Identities = 128/324 (39%), Positives = 188/324 (57%), Gaps = 40/324 (12%)
Query: 12 HISFSVVSIVISIHLITLFVNQI-----------VGFYDSSKKGMIITFLCITGLLITRW 60
++++ + + ++I ++LF++ I + F + + + + + LL RW
Sbjct: 7 NLNYQIDNYCLNISFLSLFISMICYWLVIAFPKKIFFLKFAHFEVSLANILLVYLLAYRW 66
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
+ P S+LYESL+FLSW + ++ FK + + I +P T F++ L
Sbjct: 67 LKYSYFPLSNLYESLLFLSWSLTTIQLILEFKFKHKLIGAIASPISTLTLAFSSFFLPKY 126
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
M + L+PAL+S+WL+MHVS++++ YA LL GSLLS+ L +L ++ +L++
Sbjct: 127 MQEVSPLIPALKSNWLLMHVSVILISYAMLLIGSLLSILFL---------LLSRNNKLNY 177
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSS----YRNYYRYQFIQQLDRWGYRIISLGFIF 236
+NN L S S+ +N + + +D YRII LGF F
Sbjct: 178 T----------------KNNNLTTASNSNDTLILKNEDKLNLLNTIDNLSYRIIGLGFPF 221
Query: 237 LTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIG 296
LTIGI+SGAVWANEAWGSYW+WDPKETWA ITW IFAIYLH+R NK +G S+IVA G
Sbjct: 222 LTIGIISGAVWANEAWGSYWSWDPKETWALITWIIFAIYLHTRINKSWQGKKSAIVAGFG 281
Query: 297 FLIIWICYFGVNLLGIGLHNYGSF 320
F+++WICY GVN LG GLH+YG F
Sbjct: 282 FVVVWICYLGVNFLGKGLHSYGWF 305
>CCSA_CYACA (O19901) Cytochrome c biogenesis protein ccsA
Length = 293
Score = 194 bits (492), Expect = 3e-49
Identities = 107/256 (41%), Positives = 153/256 (58%), Gaps = 15/256 (5%)
Query: 45 MIITFLCITGLLITRWFFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAP 104
+I + I G+L+ R F + P S+LYESL+FLSW +I ++ F + + + I +
Sbjct: 47 LIFSNCIIAGMLLERCFRYSYFPLSNLYESLLFLSWVLNIITII--FVDKLSIIGAIGSS 104
Query: 105 SVIFTQGFATSGLLTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVIT 164
+V G+A L + Q+ IL PAL+S+WLMMHVS+MI Y L+ G+ LS+ +++
Sbjct: 105 AVTLIIGYANYILPPSLRQTSILAPALRSNWLMMHVSVMIFSYGLLIMGAFLSLIYVIVN 164
Query: 165 FQELIPILGKSKRLSFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDR 224
L + L Y FD NE N + + + RN Y+ I+ L
Sbjct: 165 NNLSQKSLNRMFYLPSFYVDFD--------KNEPRNDIGTATIN--RNKLSYETIESLS- 213
Query: 225 WGYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKL 284
Y+ ISLGFI LT+GI+SG+VWANEAWG+YW+WDPKETWA ITW +FA YLH R NKK
Sbjct: 214 --YKFISLGFISLTLGIISGSVWANEAWGNYWSWDPKETWALITWLVFATYLHIRINKKW 271
Query: 285 EGLNSSIVASIGFLII 300
+ +S+VAS+G ++I
Sbjct: 272 NKIYASLVASLGLIVI 287
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.329 0.142 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,248,043
Number of Sequences: 164201
Number of extensions: 1470174
Number of successful extensions: 4759
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4653
Number of HSP's gapped (non-prelim): 66
length of query: 323
length of database: 59,974,054
effective HSP length: 110
effective length of query: 213
effective length of database: 41,911,944
effective search space: 8927244072
effective search space used: 8927244072
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 66 (30.0 bits)
Description of BAB33244.1