BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33231.1 134 aa
(134 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RR8_LOTJA (Q9BBQ1) Chloroplast 30S ribosomal protein S8 267 3e-72
RR8_PHAAN (P59033) Chloroplast 30S ribosomal protein S8 233 5e-62
RR8_TOBAC (P06363) Chloroplast 30S ribosomal protein S8 219 1e-57
RR8_ARATH (P56801) Chloroplast 30S ribosomal protein S8 219 1e-57
RR8_ATRBE (Q8S8V8) Chloroplast 30S ribosomal protein S8 218 2e-57
RR8_SPIOL (P09597) Chloroplast 30S ribosomal protein S8 212 1e-55
RR8_OENHO (Q9MTJ0) Chloroplast 30S ribosomal protein S8 207 3e-54
RR8_ORYSA (P12148) Chloroplast 30S ribosomal protein S8 200 4e-52
RR8_MAIZE (P08530) Chloroplast 30S ribosomal protein S8 200 4e-52
RR8_WHEAT (Q95H52) Chloroplast 30S ribosomal protein S8 198 1e-51
RR8_EPIVI (P30058) Plastid 30S ribosomal protein S8 189 9e-49
RR8_PINTH (P41634) Chloroplast 30S ribosomal protein S8 176 1e-44
RR8_ANTFO (Q85AM2) Chloroplast 30S ribosomal protein S8 171 3e-43
RR8_MARPO (P06362) Chloroplast 30S ribosomal protein S8 169 7e-43
RR8_CHAGL (P59032) Chloroplast 30S ribosomal protein S8 157 4e-39
RR8_MUSAC (Q42362) Chloroplast 30S ribosomal protein S8 (Fragment) 155 1e-38
RR8_PSINU (Q8WHY7) Chloroplast 30S ribosomal protein S8 150 4e-37
RR8_SPIMX (O98458) Chloroplast 30S ribosomal protein S8 147 5e-36
RR8_PORPU (P51301) Chloroplast 30S ribosomal protein S8 139 1e-33
RS8_ANASP (Q8YPJ2) 30S ribosomal protein S8 136 9e-33
>RR8_LOTJA (Q9BBQ1) Chloroplast 30S ribosomal protein S8
Length = 134
Score = 267 bits (683), Expect = 3e-72
Identities = 134/134 (100%), Positives = 134/134 (100%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV
Sbjct: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RLEKIGGEVLCYIW
Sbjct: 121 RLEKIGGEVLCYIW 134
>RR8_PHAAN (P59033) Chloroplast 30S ribosomal protein S8
Length = 134
Score = 233 bits (594), Expect = 5e-62
Identities = 116/134 (86%), Positives = 124/134 (91%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIA+IIT IRNADMN+K VQ+PFTNITE VKILLREGF+EN+RKHRE++K FLV
Sbjct: 1 MGKDTIANIITYIRNADMNKKGMVQLPFTNITEKIVKILLREGFVENIRKHRENNKYFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLRYRRN K S K FLNLKRISTPGLRIYYNYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61 LTLRYRRNRKESSKNFLNLKRISTPGLRIYYNYQQIPRILGGMGIVILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RLEKIGGEVLCYIW
Sbjct: 121 RLEKIGGEVLCYIW 134
>RR8_TOBAC (P06363) Chloroplast 30S ribosomal protein S8
Length = 134
Score = 219 bits (557), Expect = 1e-57
Identities = 110/134 (82%), Positives = 120/134 (89%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTIA+IITSIRNADM+RKR V+I TNITEN V+ILLREGFIENVRKHRE +K FLV
Sbjct: 1 MGRDTIAEIITSIRNADMDRKRVVRIASTNITENIVQILLREGFIENVRKHREKNKYFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN K Y+ LNLKRIS PGLRIY NYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61 LTLRHRRNRKRPYRNILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RLE IGGE+LCYIW
Sbjct: 121 RLEGIGGEILCYIW 134
>RR8_ARATH (P56801) Chloroplast 30S ribosomal protein S8
Length = 134
Score = 219 bits (557), Expect = 1e-57
Identities = 110/134 (82%), Positives = 123/134 (91%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIADIITSIRNADMNRK TV+I TNITE+ VKILLREGFIENVRKHRE+++ FL+
Sbjct: 1 MGKDTIADIITSIRNADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRENNQYFLI 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN K SYKT LNLKRIS PGLRIY N Q+IPRILGG+GIVILSTS+GIMTDREA
Sbjct: 61 LTLRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RL++IGGE+LCYIW
Sbjct: 121 RLKRIGGEILCYIW 134
>RR8_ATRBE (Q8S8V8) Chloroplast 30S ribosomal protein S8
Length = 134
Score = 218 bits (554), Expect = 2e-57
Identities = 109/134 (81%), Positives = 121/134 (89%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTIA+IITSIRNADM+RKR V+I TNITEN V+ILLREGFIENVRKH+E++K FLV
Sbjct: 1 MGRDTIAEIITSIRNADMDRKRVVRIASTNITENIVQILLREGFIENVRKHQENNKYFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN K Y+ LNLKRIS PGLRIY NYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61 LTLRHRRNKKRPYRNILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RLE IGGE+LCYIW
Sbjct: 121 RLEGIGGEILCYIW 134
>RR8_SPIOL (P09597) Chloroplast 30S ribosomal protein S8
Length = 133
Score = 212 bits (539), Expect = 1e-55
Identities = 107/133 (80%), Positives = 115/133 (86%)
Query: 2 GKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLVL 61
GKDTIADIIT IRNADMNRK TV+I TNITEN VKILLREGFIEN RKH+E +K FLVL
Sbjct: 1 GKDTIADIITCIRNADMNRKGTVRIVSTNITENIVKILLREGFIENARKHQERNKYFLVL 60
Query: 62 TLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREAR 121
TLR+RRN KG Y +LKR+S PGLRIY NYQ+IPRILGGMGI ILSTSRGIMTDREAR
Sbjct: 61 TLRHRRNKKGPYLNTFHLKRVSRPGLRIYSNYQRIPRILGGMGIAILSTSRGIMTDREAR 120
Query: 122 LEKIGGEVLCYIW 134
LE IGGE+LCYIW
Sbjct: 121 LEGIGGEILCYIW 133
>RR8_OENHO (Q9MTJ0) Chloroplast 30S ribosomal protein S8
Length = 138
Score = 207 bits (527), Expect = 3e-54
Identities = 108/138 (78%), Positives = 118/138 (85%), Gaps = 4/138 (2%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTIADIITSIRN DMNRK TV+I TN+ + VKILLREGFIENVRKH+E+ KSFLV
Sbjct: 1 MGRDTIADIITSIRNVDMNRKGTVRIESTNMPKEIVKILLREGFIENVRKHQENKKSFLV 60
Query: 61 LTLRYRRNTKGSYKTF----LNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMT 116
LTLR+RRN KG + LNLKRIS PGLR+Y NYQKIPRILGGMGIVILSTSRGIMT
Sbjct: 61 LTLRHRRNRKGPSPSRTSLNLNLKRISRPGLRVYSNYQKIPRILGGMGIVILSTSRGIMT 120
Query: 117 DREARLEKIGGEVLCYIW 134
DREARLE IGGE+LCYIW
Sbjct: 121 DREARLEGIGGEILCYIW 138
>RR8_ORYSA (P12148) Chloroplast 30S ribosomal protein S8
Length = 136
Score = 200 bits (509), Expect = 4e-52
Identities = 102/136 (75%), Positives = 117/136 (86%), Gaps = 2/136 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIAD++TSIRNADMN+K TV++ TNITEN VKILLREGFIE+VRKH+ES++ FLV
Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRKHQESNRYFLV 60
Query: 61 LTLRY--RRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDR 118
TLR+ R+ KG Y+T LKRIS PGLRIY NYQ IP++LGGMGI ILSTSRGIMTDR
Sbjct: 61 STLRHQKRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDR 120
Query: 119 EARLEKIGGEVLCYIW 134
EARL +IGGEVLCYIW
Sbjct: 121 EARLNRIGGEVLCYIW 136
>RR8_MAIZE (P08530) Chloroplast 30S ribosomal protein S8
Length = 136
Score = 200 bits (509), Expect = 4e-52
Identities = 102/136 (75%), Positives = 117/136 (86%), Gaps = 2/136 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIAD++TSIRNADMN+K TV++ TNITEN VKILLREGFIE+VRKH+ES++ FLV
Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRKHQESNRYFLV 60
Query: 61 LTLRY--RRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDR 118
TLR+ R+ KG Y+T LKRIS PGLRIY NYQ IP++LGGMGI ILSTSRGIMTDR
Sbjct: 61 STLRHQRRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDR 120
Query: 119 EARLEKIGGEVLCYIW 134
EARL +IGGEVLCYIW
Sbjct: 121 EARLNRIGGEVLCYIW 136
>RR8_WHEAT (Q95H52) Chloroplast 30S ribosomal protein S8
Length = 136
Score = 198 bits (504), Expect = 1e-51
Identities = 101/136 (74%), Positives = 116/136 (85%), Gaps = 2/136 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIAD++TSIRNADMN+K TV++ TNITEN VKILLREGFIE+VRKH+E ++ FLV
Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRKHQERNRYFLV 60
Query: 61 LTLRY--RRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDR 118
TLR+ R+ KG Y+T LKRIS PGLRIY NYQ IP++LGGMGI ILSTSRGIMTDR
Sbjct: 61 STLRHQKRKTRKGIYRTRTFLKRISRPGLRIYTNYQGIPKVLGGMGIAILSTSRGIMTDR 120
Query: 119 EARLEKIGGEVLCYIW 134
EARL +IGGEVLCYIW
Sbjct: 121 EARLNRIGGEVLCYIW 136
>RR8_EPIVI (P30058) Plastid 30S ribosomal protein S8
Length = 134
Score = 189 bits (480), Expect = 9e-49
Identities = 97/134 (72%), Positives = 108/134 (80%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTI +II SIRNAD RKR V+I TNITEN VKIL EGFIEN RKHRE +K +
Sbjct: 1 MGRDTILEIINSIRNADRGRKRVVRITSTNITENFVKILFIEGFIENARKHREKNKYYFT 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN+K Y LNLKRIS PGLRIY N Q+IP ILGG+GIVIL TSRGIMTDREA
Sbjct: 61 LTLRHRRNSKRPYINILNLKRISRPGLRIYSNSQQIPLILGGIGIVILYTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RL+ IGGE+LCYIW
Sbjct: 121 RLKGIGGELLCYIW 134
>RR8_PINTH (P41634) Chloroplast 30S ribosomal protein S8
Length = 132
Score = 176 bits (445), Expect = 1e-44
Identities = 87/134 (64%), Positives = 108/134 (79%), Gaps = 2/134 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG DTI ++ITSIRNADM K TV++ TNIT+N +ILLREGFIE+VR+H+E K FL+
Sbjct: 1 MGNDTITNLITSIRNADMVEKGTVRVTATNITKNIGRILLREGFIEDVREHQEGQKYFLI 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
T +YRR K +Y T KR S PGLRIY NY++IP++LGGMGIVILSTS+GI+TDREA
Sbjct: 61 STSKYRRRKKRTYMT--TSKRTSKPGLRIYSNYREIPKVLGGMGIVILSTSQGILTDREA 118
Query: 121 RLEKIGGEVLCYIW 134
R +KIGGE+LCY+W
Sbjct: 119 RQKKIGGEILCYVW 132
>RR8_ANTFO (Q85AM2) Chloroplast 30S ribosomal protein S8
Length = 132
Score = 171 bits (432), Expect = 3e-43
Identities = 82/134 (61%), Positives = 106/134 (78%), Gaps = 2/134 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG D IA++IT+IRNA++ R TV++P TN+T N KILLREGFIE+ +H+E+ SFL+
Sbjct: 1 MGNDIIANMITAIRNANLGRAETVEVPATNLTRNIAKILLREGFIESFSEHQENKNSFLI 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
L+YR + Y T L+RIS PGLRIY NYQ+IPR+LGG GIVILSTSRGI+TDREA
Sbjct: 61 FILKYRGKKRKPYIT--TLRRISKPGLRIYSNYQEIPRVLGGTGIVILSTSRGIITDREA 118
Query: 121 RLEKIGGEVLCYIW 134
R +++GGE+LCY+W
Sbjct: 119 RQKQVGGEILCYVW 132
>RR8_MARPO (P06362) Chloroplast 30S ribosomal protein S8
Length = 132
Score = 169 bits (429), Expect = 7e-43
Identities = 83/134 (61%), Positives = 108/134 (79%), Gaps = 2/134 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG DTIA++ITSIRNA++ + +TVQ+P TNIT N KIL +EGFI+N ++++ K L+
Sbjct: 1 MGNDTIANMITSIRNANLGKIKTVQVPATNITRNIAKILFQEGFIDNFIDNKQNTKDILI 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
L L+Y+ K SY T L+RIS PGLRIY N+++IP++LGGMGIVILSTSRGIMTDREA
Sbjct: 61 LNLKYQGKKKKSYIT--TLRRISKPGLRIYSNHKEIPKVLGGMGIVILSTSRGIMTDREA 118
Query: 121 RLEKIGGEVLCYIW 134
R +KIGGE+LCY+W
Sbjct: 119 RQKKIGGELLCYVW 132
>RR8_CHAGL (P59032) Chloroplast 30S ribosomal protein S8
Length = 132
Score = 157 bits (397), Expect = 4e-39
Identities = 78/135 (57%), Positives = 109/135 (79%), Gaps = 4/135 (2%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
M D IA++ITSIRNA++ + + +++P T IT++ KILL+EGFI+N+R+ E++K+FL+
Sbjct: 1 MTSDVIANMITSIRNANLRKIKVIELPATKITKSIGKILLQEGFIDNLREREENNKNFLI 60
Query: 61 LTLR-YRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDRE 119
LTLR RR K S T ++RIS PGLRIY N+Q+IP++LGG+GIVILSTS+GIM+DR+
Sbjct: 61 LTLRSQRRKHKASITT---IRRISKPGLRIYSNHQEIPKVLGGIGIVILSTSQGIMSDRQ 117
Query: 120 ARLEKIGGEVLCYIW 134
AR +IGGE+LCYIW
Sbjct: 118 ARQNRIGGEILCYIW 132
>RR8_MUSAC (Q42362) Chloroplast 30S ribosomal protein S8 (Fragment)
Length = 116
Score = 155 bits (392), Expect = 1e-38
Identities = 82/110 (74%), Positives = 94/110 (84%), Gaps = 2/110 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIADIITSIRNADMN+K TV+I TNITEN VKILLREGFIENVRKH+E +K FLV
Sbjct: 1 MGKDTIADIITSIRNADMNKKGTVRIASTNITENIVKILLREGFIENVRKHQEGNKYFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILST 110
TLR+R+ K ++T LKRIS PGLRIY +YQ+IP+ILGG+GIVILST
Sbjct: 61 STLRHRKTRKRIHRTI--LKRISRPGLRIYSDYQQIPKILGGIGIVILST 108
>RR8_PSINU (Q8WHY7) Chloroplast 30S ribosomal protein S8
Length = 132
Score = 150 bits (380), Expect = 4e-37
Identities = 74/134 (55%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
M DTIAD+I+ +RNA+M + V++P T IT+N VKILL+EGFI++ K + +SF +
Sbjct: 1 MSHDTIADMISLVRNANMRKAVKVRVPATGITQNIVKILLQEGFIKDYMKQEKRTRSFFI 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTL+Y+ + + T KRIS P LRIY NYQKI RILGGMGI I+STS GIMTDREA
Sbjct: 61 LTLKYQGRVRKPHITAF--KRISKPSLRIYSNYQKITRILGGMGIAIISTSSGIMTDREA 118
Query: 121 RLEKIGGEVLCYIW 134
R +++GGE++C++W
Sbjct: 119 RQKRLGGEIICHVW 132
>RR8_SPIMX (O98458) Chloroplast 30S ribosomal protein S8
Length = 132
Score = 147 bits (370), Expect = 5e-36
Identities = 72/133 (54%), Positives = 101/133 (75%), Gaps = 2/133 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
M D I+++ITSIRNA +++ +TV I T T + KILL+EGFI+ +R+ +E+ + L+
Sbjct: 1 MSNDIISNMITSIRNAILSKTKTVDILATTTTRSIAKILLQEGFIDGLRERQENGRRLLL 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTL Y R K T +L+RIS PGLR+Y N+Q+IP++LGG+GIVILSTS+GIM DREA
Sbjct: 61 LTLHYERKNKSKITT--SLRRISKPGLRVYSNHQEIPKVLGGIGIVILSTSKGIMVDREA 118
Query: 121 RLEKIGGEVLCYI 133
R +KIGGE++CY+
Sbjct: 119 RHKKIGGEIICYV 131
>RR8_PORPU (P51301) Chloroplast 30S ribosomal protein S8
Length = 133
Score = 139 bits (350), Expect = 1e-33
Identities = 64/131 (48%), Positives = 95/131 (71%), Gaps = 2/131 (1%)
Query: 4 DTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLVLTL 63
DT+AD++T IRNA++ R + VQ+P T +T N +L EGF+ N + E ++ L+++L
Sbjct: 5 DTVADMLTRIRNANLARHQIVQVPATKVTRNMALVLKEEGFVHNFEQMGEGIETHLMISL 64
Query: 64 RYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREARLE 123
+Y N K LKRIS PGLR+Y N++++PR+LGG+GI I+STS+G+MTDR+AR +
Sbjct: 65 KY--NGKNRQPVITALKRISKPGLRVYANHKELPRVLGGLGIAIISTSQGVMTDRQARHD 122
Query: 124 KIGGEVLCYIW 134
+GGE+LCYIW
Sbjct: 123 GLGGEILCYIW 133
>RS8_ANASP (Q8YPJ2) 30S ribosomal protein S8
Length = 133
Score = 136 bits (342), Expect = 9e-33
Identities = 66/131 (50%), Positives = 92/131 (69%), Gaps = 2/131 (1%)
Query: 4 DTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLVLTL 63
DTIAD++T IRNA+M R +T +P T +T + K+L EGFI + + + K LV+ L
Sbjct: 5 DTIADMLTRIRNANMARHQTTLVPATKMTRSIAKVLQEEGFIAEISEEGDEVKRNLVIAL 64
Query: 64 RYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREARLE 123
+Y+ + T L KR+S PGLR+Y N +++PR+LGG+GI I+STS GIMTDREAR +
Sbjct: 65 KYKGKNRQPLITAL--KRVSKPGLRVYSNRKELPRVLGGIGIAIISTSSGIMTDREARRQ 122
Query: 124 KIGGEVLCYIW 134
+GGEVLCY+W
Sbjct: 123 NVGGEVLCYVW 133
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.323 0.141 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,704,108
Number of Sequences: 164201
Number of extensions: 558584
Number of successful extensions: 1534
Number of sequences better than 10.0: 205
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1220
Number of HSP's gapped (non-prelim): 207
length of query: 134
length of database: 59,974,054
effective HSP length: 110
effective length of query: 24
effective length of database: 41,911,944
effective search space: 1005886656
effective search space used: 1005886656
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Description of BAB33231.1