BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33188.1 100 aa
(100 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RR14_LOTJA (Q9BBT3) Chloroplast 30S ribosomal protein S14 207 5e-54
RR14_ARATH (P56804) Chloroplast 30S ribosomal protein S14 190 6e-49
RR14_TOBAC (P06371) Chloroplast 30S ribosomal protein S14 189 1e-48
RR14_SPIOL (P06507) Chloroplast 30S ribosomal protein S14 178 2e-45
RR14_EPIVI (P27071) Plastid 30S ribosomal protein S14 174 4e-44
RR14_MAIZE (P08527) Chloroplast 30S ribosomal protein S14 169 1e-42
RR14_ORYSA (P09096) Chloroplast 30S ribosomal protein S14 167 5e-42
RR14_WHEAT (Q95H62) Chloroplast 30S ribosomal protein S14 165 2e-41
RR14_PEA (P05638) Chloroplast 30S ribosomal protein S14 164 3e-41
RR14_PINTH (P41641) Chloroplast 30S ribosomal protein S14 160 7e-40
RR14_MARPO (P06370) Chloroplast 30S ribosomal protein S14 157 6e-39
RR14_ANTFO (Q85CU9) Chloroplast 30S ribosomal protein S14 148 3e-36
RR14_MESVI (Q9MUR6) Chloroplast 30S ribosomal protein S14 130 4e-31
RR14_PORPU (P51319) Chloroplast 30S ribosomal protein S14 124 3e-29
RR14_CHLRE (Q9GGE2) Chloroplast 30S ribosomal protein S14 118 2e-27
RR14_GUITH (O78506) Chloroplast 30S ribosomal protein S14 118 3e-27
RR14_CYAPA (P48138) Cyanelle 30S ribosomal protein S14 117 5e-27
RS14_SYNP6 (P52858) 30S ribosomal protein S14 113 7e-26
RR14_ODOSI (P49502) Chloroplast 30S ribosomal protein S14 113 7e-26
RS14_SYNY3 (P48944) 30S ribosomal protein S14 110 8e-25
>RR14_LOTJA (Q9BBT3) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 207 bits (526), Expect = 5e-54
Identities = 100/100 (100%), Positives = 100/100 (100%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH
Sbjct: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW
Sbjct: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
>RR14_ARATH (P56804) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 190 bits (482), Expect = 6e-49
Identities = 91/100 (91%), Positives = 95/100 (95%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+KSLI REKKRQKLE+KYHLIRRSSKKEISK+PSLSEKWKIHGKL+S PRNSAPTRLH
Sbjct: 1 MAKKSLIYREKKRQKLEKKYHLIRRSSKKEISKIPSLSEKWKIHGKLQSPPRNSAPTRLH 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RRCFSTGRPRANYRDFGLSGH LREMV CLLPGATRSSW
Sbjct: 61 RRCFSTGRPRANYRDFGLSGHILREMVQACLLPGATRSSW 100
>RR14_TOBAC (P06371) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 189 bits (479), Expect = 1e-48
Identities = 91/100 (91%), Positives = 95/100 (95%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MARKSLIQREKKRQKLEQKYH IRRSSKKEISKVPSLS+KW+I+GKL+S PRNSAPTRLH
Sbjct: 1 MARKSLIQREKKRQKLEQKYHSIRRSSKKEISKVPSLSDKWEIYGKLQSPPRNSAPTRLH 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RRCF TGRPRANYRDFGLSGH LREMVH CLLPGATRSSW
Sbjct: 61 RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100
>RR14_SPIOL (P06507) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 178 bits (452), Expect = 2e-45
Identities = 86/100 (86%), Positives = 91/100 (91%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MARKSLIQREKKR+ LEQKYHLIRRSSK+EI KV SLS+KW+IHGKL+S PRNSAP RLH
Sbjct: 1 MARKSLIQREKKRRNLEQKYHLIRRSSKQEIRKVTSLSDKWEIHGKLQSPPRNSAPARLH 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RRCF TGRPRAN RDFGLSGH LREMVH CLLPGATRSSW
Sbjct: 61 RRCFLTGRPRANIRDFGLSGHILREMVHTCLLPGATRSSW 100
>RR14_EPIVI (P27071) Plastid 30S ribosomal protein S14
Length = 100
Score = 174 bits (440), Expect = 4e-44
Identities = 85/100 (85%), Positives = 89/100 (89%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MARKSLIQREK R KLE KYH IRRSSK EISKVPSLS+KW+I+GKLES PRNSAPTRL
Sbjct: 1 MARKSLIQREKGRLKLENKYHFIRRSSKNEISKVPSLSDKWEIYGKLESPPRNSAPTRLR 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RRCF TGRPRANYRDFGL GH LREMV+ CLLPGATRSSW
Sbjct: 61 RRCFYTGRPRANYRDFGLCGHILREMVNACLLPGATRSSW 100
>RR14_MAIZE (P08527) Chloroplast 30S ribosomal protein S14
Length = 103
Score = 169 bits (427), Expect = 1e-42
Identities = 88/103 (85%), Positives = 93/103 (89%), Gaps = 3/103 (2%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEI-SKVP--SLSEKWKIHGKLESLPRNSAPT 57
MA+KSLIQREKKRQKLEQKYHLIRRSSKK+I SKV SLSEK K+ KL+SLPRNSAPT
Sbjct: 1 MAKKSLIQREKKRQKLEQKYHLIRRSSKKKIRSKVSPLSLSEKTKMQEKLQSLPRNSAPT 60
Query: 58 RLHRRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RLHRRCF TGRPRANYRDFGLSGH LREMV+ CLLPGATRSSW
Sbjct: 61 RLHRRCFLTGRPRANYRDFGLSGHILREMVYACLLPGATRSSW 103
>RR14_ORYSA (P09096) Chloroplast 30S ribosomal protein S14
Length = 103
Score = 167 bits (422), Expect = 5e-42
Identities = 87/103 (84%), Positives = 93/103 (89%), Gaps = 3/103 (2%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEI-SKVP--SLSEKWKIHGKLESLPRNSAPT 57
MA+KSLIQRE+KRQKLEQKYHLIRRSSKK+I SKV SLSEK K+ KL+SLPRNSAPT
Sbjct: 1 MAKKSLIQRERKRQKLEQKYHLIRRSSKKKIRSKVYPLSLSEKTKMREKLQSLPRNSAPT 60
Query: 58 RLHRRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RLHRRCF TGRPRANYRDFGLSGH LREMV+ CLLPGATRSSW
Sbjct: 61 RLHRRCFLTGRPRANYRDFGLSGHILREMVYACLLPGATRSSW 103
>RR14_WHEAT (Q95H62) Chloroplast 30S ribosomal protein S14
Length = 103
Score = 165 bits (417), Expect = 2e-41
Identities = 86/103 (83%), Positives = 92/103 (88%), Gaps = 3/103 (2%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEI-SKVP--SLSEKWKIHGKLESLPRNSAPT 57
MA+KSLIQREKKRQKLEQKYHLIR+S KK+I SKV SLSEK K+ KL+SLPRNSAPT
Sbjct: 1 MAKKSLIQREKKRQKLEQKYHLIRQSLKKKIRSKVSPLSLSEKTKMREKLQSLPRNSAPT 60
Query: 58 RLHRRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RLHRRCF TGRPRANYR FGLSGH LREMV+ECLLPGATRSSW
Sbjct: 61 RLHRRCFLTGRPRANYRHFGLSGHVLREMVYECLLPGATRSSW 103
>RR14_PEA (P05638) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 164 bits (416), Expect = 3e-41
Identities = 80/100 (80%), Positives = 88/100 (88%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+KSLI REKKR+KLE+K++LIRR KE+SK SLSE W+I GKLE+LPRNSAPTRLH
Sbjct: 1 MAKKSLIAREKKRKKLEEKFYLIRRYPTKEMSKGGSLSESWEIQGKLEALPRNSAPTRLH 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RRCF TGRPRAN RDFGLSGH LREMVH CLLPGATRSSW
Sbjct: 61 RRCFLTGRPRANVRDFGLSGHILREMVHICLLPGATRSSW 100
>RR14_PINTH (P41641) Chloroplast 30S ribosomal protein S14
Length = 99
Score = 160 bits (404), Expect = 7e-40
Identities = 78/100 (78%), Positives = 87/100 (87%), Gaps = 1/100 (1%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MARKSLIQREKKRQ LE+KYHLIR+S +++ SKV SL +KW+IH KL+S PRNSAPTRLH
Sbjct: 1 MARKSLIQREKKRQALERKYHLIRQSLEEK-SKVSSLDDKWEIHRKLQSSPRNSAPTRLH 59
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RRC STGRPRANYRDFGLSGH LREM H CLLPG +SSW
Sbjct: 60 RRCSSTGRPRANYRDFGLSGHILREMAHACLLPGIKKSSW 99
>RR14_MARPO (P06370) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 157 bits (396), Expect = 6e-39
Identities = 73/100 (73%), Positives = 84/100 (84%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+KSLIQREKKRQ LE+KY ++R S KK+I++ SL EKW+ KL+SLPRNSAPTRLH
Sbjct: 1 MAKKSLIQREKKRQNLEKKYKILRNSLKKKITETSSLDEKWEFQKKLQSLPRNSAPTRLH 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RRCF TGRP+ANYRDFGLS H LREM H CLLPG T+SSW
Sbjct: 61 RRCFLTGRPKANYRDFGLSRHLLREMAHACLLPGVTKSSW 100
>RR14_ANTFO (Q85CU9) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 148 bits (373), Expect = 3e-36
Identities = 67/100 (67%), Positives = 83/100 (83%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+KSLIQREKKR+KL+QKY R+ K+E+S+ S+ +KW+I +L+SLPRNS PTR+H
Sbjct: 1 MAKKSLIQREKKREKLKQKYQAFRKYLKEEMSQTLSIDKKWEIQKQLQSLPRNSTPTRIH 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RRCF TGRPRANYRDF LS H LREM+H CLLPG T++SW
Sbjct: 61 RRCFLTGRPRANYRDFNLSRHILREMIHACLLPGVTKASW 100
>RR14_MESVI (Q9MUR6) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 130 bits (328), Expect = 4e-31
Identities = 61/100 (61%), Positives = 76/100 (76%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+KS+I+REKKRQKL KY + R+ K++I S E++K+ +L+ LPRNS+PTRLH
Sbjct: 1 MAKKSMIEREKKRQKLVNKYAVKRKELKEQIKTSVSFEERFKLQLELQKLPRNSSPTRLH 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RC TGRP+ YRDFGLS H LREM HECLLPG T+SSW
Sbjct: 61 NRCSVTGRPKGYYRDFGLSRHVLREMAHECLLPGVTKSSW 100
>RR14_PORPU (P51319) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 124 bits (312), Expect = 3e-29
Identities = 58/100 (58%), Positives = 75/100 (75%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+K++IQRE KR+KLE+KY+L R + K+++ K S +EK ++ KL+ +PRNSAP R
Sbjct: 1 MAKKNMIQREIKREKLEKKYYLKRLAIKEQLKKTTSFAEKIELRQKLQEMPRNSAPVRSR 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RC+ TGR R YRDFGLS H REM HECLLPG T+SSW
Sbjct: 61 NRCWLTGRSRGYYRDFGLSRHVFREMSHECLLPGVTKSSW 100
>RR14_CHLRE (Q9GGE2) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 118 bits (296), Expect = 2e-27
Identities = 57/100 (57%), Positives = 70/100 (70%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+KS+IQRE KRQKL KY R + K++I + L EK +H KL+ LPRNS+ RLH
Sbjct: 1 MAKKSMIQRELKRQKLVMKYATKRAALKEQIKQTTFLKEKLSLHRKLQQLPRNSSAVRLH 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RC TGRP+ +RDFGLS H LREM H+ LLPG +SSW
Sbjct: 61 NRCMITGRPKGYFRDFGLSRHVLREMAHQGLLPGVCKSSW 100
>RR14_GUITH (O78506) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 118 bits (295), Expect = 3e-27
Identities = 53/100 (53%), Positives = 72/100 (72%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+KS+I+RE+KR++L KY R K ++ K EK +++ K++ +PRN+ P+RL
Sbjct: 1 MAKKSMIERERKREELVSKYEKKRLELKSKLKKTAEYEEKLEVYKKIQEIPRNAFPSRLR 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RC+ TGR R YRDFGLS H LREMVH+CLLPG T+SSW
Sbjct: 61 NRCWVTGRSRGYYRDFGLSRHVLREMVHDCLLPGVTKSSW 100
>RR14_CYAPA (P48138) Cyanelle 30S ribosomal protein S14
Length = 100
Score = 117 bits (293), Expect = 5e-27
Identities = 54/100 (54%), Positives = 75/100 (75%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+KS+I+R+KKR+ L KY + R+ K +++ S+ EK ++ +L+ LPRNSAP+R+
Sbjct: 1 MAKKSMIERDKKRENLMNKYLVKRQQLKTRLNETDSVEEKLLLNQELQKLPRNSAPSRVR 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RC+ TGRPR NYRDFG+S H LREM H+ LLPG T+SSW
Sbjct: 61 IRCWLTGRPRGNYRDFGVSRHVLREMAHQGLLPGVTKSSW 100
>RS14_SYNP6 (P52858) 30S ribosomal protein S14
Length = 100
Score = 113 bits (283), Expect = 7e-26
Identities = 51/100 (51%), Positives = 73/100 (73%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+K++++R++KR+KL +KY R + K++ + S SE+ ++H KL+ LPRNSAP R+
Sbjct: 1 MAKKAMVERDRKRKKLVEKYAAKREALKEQFAAATSQSERLELHRKLQQLPRNSAPNRVR 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RC+ TGRPR YRDFGL + LREM H+ LLPG +SSW
Sbjct: 61 NRCWVTGRPRGYYRDFGLCRNVLREMAHQGLLPGVVKSSW 100
>RR14_ODOSI (P49502) Chloroplast 30S ribosomal protein S14
Length = 100
Score = 113 bits (283), Expect = 7e-26
Identities = 53/100 (53%), Positives = 66/100 (66%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+KS+I+REKKR KL KY R + + + + IH K++ LPRNSA R+
Sbjct: 1 MAKKSMIEREKKRIKLNNKYTPKRNTLLQAYRQTEDFQSRLDIHSKIQKLPRNSAKNRIR 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RC+ TGRPR YRDFG+S H LREM H CLLPG T+SSW
Sbjct: 61 NRCWKTGRPRGFYRDFGVSRHVLREMAHSCLLPGVTKSSW 100
>RS14_SYNY3 (P48944) 30S ribosomal protein S14
Length = 100
Score = 110 bits (274), Expect = 8e-25
Identities = 52/100 (52%), Positives = 69/100 (69%)
Query: 1 MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLESLPRNSAPTRLH 60
MA+KS+I+R+K+R +L KY R + K+E + +L +K +H KL+ LPRNSAP R
Sbjct: 1 MAKKSMIERDKRRSRLVAKYAAKREALKEEFRQAETLEDKLAVHQKLQDLPRNSAPNRRR 60
Query: 61 RRCFSTGRPRANYRDFGLSGHTLREMVHECLLPGATRSSW 100
RC TGRPR+ YRDFGL + LRE H+ LLPG T+SSW
Sbjct: 61 NRCQVTGRPRSYYRDFGLCRNVLREWAHQGLLPGVTKSSW 100
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.131 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,763,715
Number of Sequences: 164201
Number of extensions: 438778
Number of successful extensions: 1581
Number of sequences better than 10.0: 133
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1416
Number of HSP's gapped (non-prelim): 137
length of query: 100
length of database: 59,974,054
effective HSP length: 76
effective length of query: 24
effective length of database: 47,494,778
effective search space: 1139874672
effective search space used: 1139874672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Description of BAB33188.1