BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33185.1 126 aa
(126 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YCF3_LOTJA (Q9BBT4) Photosystem I assembly protein ycf3 264 3e-71
YCF3_OENHO (Q9MTP0) Photosystem I assembly protein ycf3 262 1e-70
YCF3_TOBAC (P12204) Photosystem I assembly protein ycf3 259 1e-69
YCF3_ATRBE (Q8S8X3) Photosystem I assembly protein ycf3 259 1e-69
YCF3_WHEAT (P58257) Photosystem I assembly protein ycf3 256 6e-69
YCF3_MAIZE (P27324) Photosystem I assembly protein ycf3 (IRF170) 256 6e-69
YCF3_SPIOL (Q9M3M5) Photosystem I assembly protein ycf3 255 1e-68
YCF3_SINAL (P61844) Photosystem I assembly protein ycf3 253 7e-68
YCF3_ORYSA (P12203) Photosystem I assembly protein ycf3 253 7e-68
YCF3_ARATH (P61843) Photosystem I assembly protein ycf3 253 7e-68
YCF3_CALFE (Q7YJX1) Photosystem I assembly protein ycf3 252 9e-68
YCF3_AMBTC (Q70Y02) Photosystem I assembly protein ycf3 251 2e-67
YCF3_PINTH (P52806) Photosystem I assembly protein ycf3 236 7e-63
YCF3_PHYPA (Q6YXP2) Photosystem I assembly protein ycf3 235 1e-62
YCF3_MARPO (P12202) Photosystem I assembly protein ycf3 233 6e-62
YCF3_CHAGL (Q8M9W1) Photosystem I assembly protein ycf3 232 1e-61
YCF3_PSINU (Q8WI17) Photosystem I assembly protein ycf3 229 1e-60
YCF3_ADICA (Q85FL9) Photosystem I assembly protein ycf3 223 8e-59
YCF3_ANTFO (Q85C36) Photosystem I assembly protein ycf3 222 1e-58
YCF3_NEPOL (Q9TL02) Photosystem I assembly protein ycf3 (RF3) 210 4e-55
>YCF3_LOTJA (Q9BBT4) Photosystem I assembly protein ycf3
Length = 168
Score = 264 bits (674), Expect = 3e-71
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>YCF3_OENHO (Q9MTP0) Photosystem I assembly protein ycf3
Length = 168
Score = 262 bits (669), Expect = 1e-70
Identities = 123/126 (97%), Positives = 126/126 (99%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSY+LYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYVLYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>YCF3_TOBAC (P12204) Photosystem I assembly protein ycf3
Length = 168
Score = 259 bits (661), Expect = 1e-69
Identities = 122/126 (96%), Positives = 125/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI+QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>YCF3_ATRBE (Q8S8X3) Photosystem I assembly protein ycf3
Length = 168
Score = 259 bits (661), Expect = 1e-69
Identities = 122/126 (96%), Positives = 125/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI+QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>YCF3_WHEAT (P58257) Photosystem I assembly protein ycf3
Length = 170
Score = 256 bits (654), Expect = 6e-69
Identities = 121/126 (96%), Positives = 124/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>YCF3_MAIZE (P27324) Photosystem I assembly protein ycf3 (IRF170)
Length = 170
Score = 256 bits (654), Expect = 6e-69
Identities = 121/126 (96%), Positives = 124/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>YCF3_SPIOL (Q9M3M5) Photosystem I assembly protein ycf3
Length = 165
Score = 255 bits (652), Expect = 1e-68
Identities = 120/126 (95%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 40 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 99
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAE+WFDQAAEYWKQA+ LTPGNYIEA NWLK
Sbjct: 100 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQAAEYWKQALTLTPGNYIEAHNWLK 159
Query: 121 ITRRFE 126
IT RFE
Sbjct: 160 ITGRFE 165
>YCF3_SINAL (P61844) Photosystem I assembly protein ycf3
Length = 168
Score = 253 bits (645), Expect = 7e-68
Identities = 119/126 (94%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI+QGDSE+AE+WF QAAEYWKQAI LTPGNYIEAQNWL
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIQQGDSEMAEAWFAQAAEYWKQAITLTPGNYIEAQNWLT 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>YCF3_ORYSA (P12203) Photosystem I assembly protein ycf3
Length = 170
Score = 253 bits (645), Expect = 7e-68
Identities = 120/126 (95%), Positives = 122/126 (96%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEAMRLE DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLESDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAI LTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIGLTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>YCF3_ARATH (P61843) Photosystem I assembly protein ycf3
Length = 168
Score = 253 bits (645), Expect = 7e-68
Identities = 119/126 (94%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI+QGDSE+AE+WF QAAEYWKQAI LTPGNYIEAQNWL
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIQQGDSEMAEAWFAQAAEYWKQAITLTPGNYIEAQNWLT 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>YCF3_CALFE (Q7YJX1) Photosystem I assembly protein ycf3
Length = 168
Score = 252 bits (644), Expect = 9e-68
Identities = 119/126 (94%), Positives = 122/126 (96%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEA RLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRA+ERN
Sbjct: 43 MSAQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRAIERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAE+W DQAAEYWKQAIALTPGNYIEA NWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWSDQAAEYWKQAIALTPGNYIEAHNWLK 162
Query: 121 ITRRFE 126
I RRFE
Sbjct: 163 IARRFE 168
>YCF3_AMBTC (Q70Y02) Photosystem I assembly protein ycf3
Length = 168
Score = 251 bits (641), Expect = 2e-67
Identities = 120/126 (95%), Positives = 122/126 (96%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEA R E+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEATRPEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQA NNMAVICHYRGEQAIRQGDSEIAE+W DQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQASNNMAVICHYRGEQAIRQGDSEIAETWSDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>YCF3_PINTH (P52806) Photosystem I assembly protein ycf3
Length = 169
Score = 236 bits (602), Expect = 7e-63
Identities = 111/125 (88%), Positives = 116/125 (92%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEALQNYYEAMRLE DPYDRSYILYNIGL+HTSNGEHTKALEYYF+ALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLETDPYDRSYILYNIGLVHTSNGEHTKALEYYFQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P LPQA NN A+ICHYRGEQAIRQGD E AE+WFDQAAEYW+QAIAL PGNYIEAQNWLK
Sbjct: 103 PSLPQALNNTALICHYRGEQAIRQGDPETAEAWFDQAAEYWEQAIALAPGNYIEAQNWLK 162
Query: 121 ITRRF 125
IT RF
Sbjct: 163 ITGRF 167
>YCF3_PHYPA (Q6YXP2) Photosystem I assembly protein ycf3
Length = 168
Score = 235 bits (599), Expect = 1e-62
Identities = 110/126 (87%), Positives = 118/126 (93%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEH KALEYYF+ALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHAKALEYYFQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P LPQAFNNMAVICHYRGEQAI+QGDSE +E+WF+QAA+YWKQAIAL P NYIEAQNWLK
Sbjct: 103 PSLPQAFNNMAVICHYRGEQAIQQGDSETSEAWFNQAADYWKQAIALAPSNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT R +
Sbjct: 163 ITDRLK 168
>YCF3_MARPO (P12202) Photosystem I assembly protein ycf3
Length = 167
Score = 233 bits (594), Expect = 6e-62
Identities = 109/125 (87%), Positives = 115/125 (91%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEH KALEYYF+ALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHAKALEYYFQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P LPQAFNNMAVICHYRGEQAI+QGD E +E+WFDQAAEYWKQAI L P NYIEA NWLK
Sbjct: 103 PSLPQAFNNMAVICHYRGEQAIQQGDPEASETWFDQAAEYWKQAILLAPSNYIEAHNWLK 162
Query: 121 ITRRF 125
+T RF
Sbjct: 163 MTGRF 167
>YCF3_CHAGL (Q8M9W1) Photosystem I assembly protein ycf3
Length = 169
Score = 232 bits (592), Expect = 1e-61
Identities = 109/126 (86%), Positives = 116/126 (91%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNG+HTKALEYY +ALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGQHTKALEYYLQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P LPQAFNNMAVICHYRGEQAI+QGD E AE+WFDQAA+YWKQ IAL P NYIEAQNWLK
Sbjct: 103 PALPQAFNNMAVICHYRGEQAIQQGDPENAEAWFDQAADYWKQGIALAPSNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT R +
Sbjct: 163 ITGRLK 168
>YCF3_PSINU (Q8WI17) Photosystem I assembly protein ycf3
Length = 171
Score = 229 bits (583), Expect = 1e-60
Identities = 108/126 (85%), Positives = 115/126 (90%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEALQNYY+AMRLE+DPYDRSYILYNIGLIHTSNGEH KALEYYF+ALERN
Sbjct: 43 MSAQSEGEYAEALQNYYKAMRLEIDPYDRSYILYNIGLIHTSNGEHAKALEYYFQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P LPQAFNNMAVICHYRGEQAI+QGD +E WFD+AAEYWKQAIAL P NYIEAQNWL+
Sbjct: 103 PSLPQAFNNMAVICHYRGEQAIQQGDPGTSEIWFDKAAEYWKQAIALAPNNYIEAQNWLR 162
Query: 121 ITRRFE 126
IT R E
Sbjct: 163 ITGRSE 168
>YCF3_ADICA (Q85FL9) Photosystem I assembly protein ycf3
Length = 183
Score = 223 bits (567), Expect = 8e-59
Identities = 105/125 (84%), Positives = 114/125 (91%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEAL +YY+AMRLE+D YDRSYILYNIGLIHTSNG H KALEYYF+ALERN
Sbjct: 43 MSAQSEGEYAEALGSYYKAMRLEIDSYDRSYILYNIGLIHTSNGNHAKALEYYFQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
FLPQAFNNMAVICHYRGEQAI QGD EI+E+WFDQAAEYW++AIAL+P NY EAQNWLK
Sbjct: 103 SFLPQAFNNMAVICHYRGEQAIYQGDLEISEAWFDQAAEYWRRAIALSPDNYAEAQNWLK 162
Query: 121 ITRRF 125
IT RF
Sbjct: 163 ITGRF 167
>YCF3_ANTFO (Q85C36) Photosystem I assembly protein ycf3
Length = 170
Score = 222 bits (566), Expect = 1e-58
Identities = 104/124 (83%), Positives = 111/124 (88%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEH KALEYYF+ALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHAKALEYYFQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
LPQA NNMAVICHYRGEQAI +GD E E WFDQAA+YWK+AI+L P NYIEAQNWL+
Sbjct: 103 SSLPQALNNMAVICHYRGEQAIEEGDPETCEVWFDQAADYWKKAISLAPSNYIEAQNWLR 162
Query: 121 ITRR 124
IT R
Sbjct: 163 ITGR 166
>YCF3_NEPOL (Q9TL02) Photosystem I assembly protein ycf3 (RF3)
Length = 171
Score = 210 bits (535), Expect = 4e-55
Identities = 100/126 (79%), Positives = 110/126 (86%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQ+EG YAEALQNYYEAMRLEVD YDRSYILYNIGLIHTSNGEH KALEYY++ALERN
Sbjct: 43 MSAQAEGEYAEALQNYYEAMRLEVDAYDRSYILYNIGLIHTSNGEHAKALEYYYQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P+LPQA NN+AVI HYRGEQAI G+S I+ FD+AA+YWK+AI L P NYIEAQNWLK
Sbjct: 103 PYLPQALNNIAVIYHYRGEQAIESGNSRISNLLFDKAADYWKEAIRLAPTNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT R E
Sbjct: 163 ITNRLE 168
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.133 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,564,495
Number of Sequences: 164201
Number of extensions: 591781
Number of successful extensions: 1581
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1429
Number of HSP's gapped (non-prelim): 191
length of query: 126
length of database: 59,974,054
effective HSP length: 102
effective length of query: 24
effective length of database: 43,225,552
effective search space: 1037413248
effective search space used: 1037413248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Description of BAB33185.1