BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33244.1 323 aa
(323 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB33244.1| hypothetical protein [Lotus corniculatus var. ja... 654 0.0
ref|YP_087015.1| hypothetical protein PSC1167 [Panax ginseng] gi... 491 e-138
emb|CAD28771.1| Ycf5 protein [Calycanthus floridus var. glaucus]... 484 e-135
emb|CAB88783.1| ycf5 protein [Spinacia oleracea] gi|11497580|ref... 482 e-135
emb|CAA77395.1| c-type cytochrome synthesis protein [Nicotiana t... 474 e-132
emb|CAB67219.1| Ycf5 protein [Oenothera elata subsp. hookeri] gi... 471 e-131
dbj|BAA84436.1| ycf5 [Arabidopsis thaliana] gi|7525084|ref|NP_05... 467 e-130
emb|CAC88095.1| ccsA protein [Atropa belladonna] gi|28261768|ref... 463 e-129
emb|CAF28645.1| ccsA [Nymphaea alba] gi|50346834|ref|YP_053205.1... 461 e-128
emb|CAD45156.1| ccsA [Amborella trichopoda] gi|34500963|ref|NP_9... 457 e-127
emb|CAJ00808.1| cytochrome c bigenesis protein [Cucumis sativus] 453 e-126
ref|YP_052814.1| heme attachment protein [Oryza nivara] gi|49615... 451 e-125
emb|CAA33952.1| unnamed protein product [Oryza sativa (japonica ... 451 e-125
emb|CAA60348.1| hypothetical protein [Zea mays] gi|11467254|ref|... 447 e-124
gb|AAT44652.1| c-type cytochrome biogenesis protein [Saccharum h... 446 e-124
ref|NP_114307.1| cytochrome c biogenesis protein [Triticum aesti... 432 e-120
gb|AAS46091.1| cytochrome c biogenesis protein [Oryza sativa (in... 400 e-110
gb|AAS46156.1| cytochrome c biogenesis protein [Oryza sativa (ja... 389 e-107
ref|NP_042493.1| cytochrome c biogenesis protein [Pinus thunberg... 344 2e-93
emb|CAA28133.1| unnamed protein product [Marchantia polymorpha] ... 317 3e-85
>dbj|BAB33244.1| hypothetical protein [Lotus corniculatus var. japonicus]
gi|13518486|ref|NP_084844.1| hypothetical protein
LocoCp071 [Lotus corniculatus var. japonicus]
gi|18202720|sp|Q9BBP4|CCSA_LOTJA Cytochrome c biogenesis
protein ccsA
Length = 323
Score = 654 bits (1688), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW
Sbjct: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE
Sbjct: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF
Sbjct: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG
Sbjct: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII
Sbjct: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
Query: 301 WICYFGVNLLGIGLHNYGSFTSN 323
WICYFGVNLLGIGLHNYGSFTSN
Sbjct: 301 WICYFGVNLLGIGLHNYGSFTSN 323
>ref|YP_087015.1| hypothetical protein PSC1167 [Panax ginseng]
gi|51235363|gb|AAT98559.1| unknown [Panax ginseng]
Length = 320
Score = 491 bits (1265), Expect = e-138
Identities = 247/321 (76%), Positives = 274/321 (84%), Gaps = 5/321 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFSTLEHILTHISFS+VSIVI+IHLITL V++I+ YDSS+KGMI FLCITGLL+TRW
Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITLLVDEIIKLYDSSEKGMIAIFLCITGLLVTRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
+S H P SDLYESLIFLSW S+ ++VP FKK+K +LSTI A SVIFTQGFATSGLLTE
Sbjct: 61 IYSRHFPLSDLYESLIFLSWSLSVIHIVPYFKKKKKNLSTITASSVIFTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
+HQS ILVPALQS WL+MHVSMMIL YAALLCGSLLSVA+LVITF++ I KR
Sbjct: 121 IHQSAILVPALQSEWLIMHVSMMILSYAALLCGSLLSVALLVITFRKNRNIF--CKRNPL 178
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L E F + EI+Y MNERNNVLR T FS+ +NYYR Q IQQLD W YR+ISLGFIFLTIG
Sbjct: 179 LNELFSFGEIQY--MNERNNVLRTTFFSA-KNYYRSQLIQQLDYWSYRVISLGFIFLTIG 235
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITW +FAIYLH+R N KL G NS+IVASIGFLII
Sbjct: 236 ILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNIKLRGANSAIVASIGFLII 295
Query: 301 WICYFGVNLLGIGLHNYGSFT 321
WICYFGVNLLGIGLH+YGSFT
Sbjct: 296 WICYFGVNLLGIGLHSYGSFT 316
>emb|CAD28771.1| Ycf5 protein [Calycanthus floridus var. glaucus]
gi|32480894|ref|NP_862804.1| cytochrome c biogenesis
protein [Calycanthus floridus var. glaucus]
Length = 323
Score = 484 bits (1247), Expect = e-135
Identities = 236/325 (72%), Positives = 271/325 (82%), Gaps = 4/325 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFSTLEHILTHISFS++SIVI+IHL+ L V+ VG DSS+KGM+ TF CITGLL+TRW
Sbjct: 1 MIFSTLEHILTHISFSIISIVITIHLLNLLVHDTVGLCDSSEKGMMATFFCITGLLVTRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
+S H P SDLYESL+FLSW FSI +MVP F+ KN LS I APS IFTQGFATSGLLTE
Sbjct: 61 IYSRHFPLSDLYESLMFLSWSFSIIHMVPYFRNHKNSLSAITAPSAIFTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQS WLMMHVSMM+LGYA+LLCGSLLSVA+LVITF++ + I GK+ F
Sbjct: 121 MHQSAILVPALQSQWLMMHVSMMLLGYASLLCGSLLSVALLVITFRKTLGIPGKNNH--F 178
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L SF + EI+Y N + +VL+KTSF S+RNY+RYQ Q+LD YRIISLGF F TIG
Sbjct: 179 LIGSFPFGEIRYFNEKRKRSVLKKTSFFSFRNYHRYQLTQRLDHCSYRIISLGFTFSTIG 238
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLH+R N++ + + +IVAS+GFLII
Sbjct: 239 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRTNQRFQDVGPAIVASMGFLII 298
Query: 301 WICYFGVNLLGIGLHNYGSF--TSN 323
WICYFGVNLLGIGLH+YGSF TSN
Sbjct: 299 WICYFGVNLLGIGLHSYGSFALTSN 323
>emb|CAB88783.1| ycf5 protein [Spinacia oleracea] gi|11497580|ref|NP_054987.1|
cytochrome c biogenesis protein [Spinacia oleracea]
gi|18203255|sp|Q9M3J1|CCSA_SPIOL Cytochrome c biogenesis
protein ccsA
Length = 323
Score = 482 bits (1241), Expect = e-135
Identities = 240/323 (74%), Positives = 271/323 (83%), Gaps = 6/323 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFSTLEHILTHISFS VS+VI++HLITL VN+IVG Y+S +KGM++TF CITGLL+TRW
Sbjct: 1 MIFSTLEHILTHISFSTVSVVITLHLITLLVNEIVGLYNSLEKGMLVTFFCITGLLVTRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRF-KKQKNDLSTIIAPSVIFTQGFATSGLLT 119
+ H P SDLYESLIFLSW F + +M+P F KK+KN L+ I APS IFTQGFATSGLLT
Sbjct: 61 VYWKHFPLSDLYESLIFLSWSFYLIHMIPSFLKKEKNSLNVITAPSAIFTQGFATSGLLT 120
Query: 120 EMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQ-ELIPILGKSKRL 178
EMHQS ILVPALQS WLMMHVSMM+LGYAALL GSLLSV +L+I FQ +LI + K K L
Sbjct: 121 EMHQSGILVPALQSQWLMMHVSMMVLGYAALLGGSLLSVTLLIIIFQKDLIQVFDKRKHL 180
Query: 179 SFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLT 238
L ESF + EI+YIN E++N+++ S S RNYYR Q I+QLD W YR+ISLGFIFLT
Sbjct: 181 --LNESFFFGEIQYIN--EKSNIVQNASPSYVRNYYRSQLIEQLDHWSYRVISLGFIFLT 236
Query: 239 IGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFL 298
IGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLH R NK L G NS+IVA IGFL
Sbjct: 237 IGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHIRTNKNLRGANSAIVAFIGFL 296
Query: 299 IIWICYFGVNLLGIGLHNYGSFT 321
IIWICYFGVNLLGIGLH+YGSFT
Sbjct: 297 IIWICYFGVNLLGIGLHSYGSFT 319
>emb|CAA77395.1| c-type cytochrome synthesis protein [Nicotiana tabacum]
gi|11466014|ref|NP_054556.1| cytochrome c biogenesis
protein [Nicotiana tabacum] gi|82213|pir||A05213
cytochrome c-type synthesis protein homolog - common
tobacco chloroplast gi|140299|sp|P12216|CCSA_TOBAC
Cytochrome c biogenesis protein ccsA
gi|225254|prf||1211235CN ORF 313
Length = 313
Score = 474 bits (1219), Expect = e-132
Identities = 237/322 (73%), Positives = 264/322 (81%), Gaps = 12/322 (3%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFSTLEHILTHISFS+VSIVI+IHLIT V++IV YDSS+KG+I+TF CITGLL+TRW
Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITFLVDEIVKLYDSSEKGIIVTFFCITGLLVTRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P SDLYESLIFLSW FS+ +++P FKK LS I PS IFTQGFATSG+LTE
Sbjct: 61 ISSGHFPLSDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAIFTQGFATSGILTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
+HQSVILVPALQS WL+MHVSMMILGYAALLCGSLLSVA+LVITF++ + KS F
Sbjct: 121 IHQSVILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRQLFYKSN--GF 178
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L ESF E NVL+ TSF S +NYYR Q IQQLD W YR+ISLGF FLTIG
Sbjct: 179 LNESFFLGE----------NVLQNTSFFSAKNYYRSQLIQQLDYWSYRVISLGFTFLTIG 228
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITW +FAIYLH+R N+ L G NS+IVASIGFLII
Sbjct: 229 ILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNRNLRGANSAIVASIGFLII 288
Query: 301 WICYFGVNLLGIGLHNYGSFTS 322
WICYFGVNLLGIGLH+YGSF S
Sbjct: 289 WICYFGVNLLGIGLHSYGSFPS 310
>emb|CAB67219.1| Ycf5 protein [Oenothera elata subsp. hookeri]
gi|13518392|ref|NP_084751.1| cytochrome c biogenesis
protein [Oenothera elata subsp. hookeri]
gi|18203288|sp|Q9MTI2|CCSA_OENHO Cytochrome c biogenesis
protein ccsA
Length = 319
Score = 471 bits (1213), Expect = e-131
Identities = 233/320 (72%), Positives = 269/320 (83%), Gaps = 4/320 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIF TLEHILTHISFS+VSI I+I LITL V++I+G YDSS+KG+I TFLCITGLL+TRW
Sbjct: 1 MIFYTLEHILTHISFSLVSIGITIFLITLSVDEIIGLYDSSEKGVIGTFLCITGLLVTRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
+SGH P S+LYESL+FLSW F+I +M P FKKQK+ + TI + S IFTQG TSGLL+E
Sbjct: 61 AYSGHFPLSNLYESLLFLSWSFAIIHMFPYFKKQKSYVRTITSSSTIFTQGLVTSGLLSE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
M QS ILVPALQS WLMMHVSMM+LGYAALLCGSLLSVA+LVITF++ + I K K +F
Sbjct: 121 MQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKK--AF 178
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L +SF + EI+Y NE +NVL TSF S +NYYR Q IQQLDRW RIISLGFIFLTIG
Sbjct: 179 LKDSFSFVEIQY--RNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIG 236
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITWT+FAIYLH+R N + +NS+IVA +GF+II
Sbjct: 237 ILSGAVWANEAWGSYWNWDPKETWAFITWTMFAIYLHTRTNPNFQSVNSAIVAFLGFIII 296
Query: 301 WICYFGVNLLGIGLHNYGSF 320
WICYFGVNLLGIGLH+YGSF
Sbjct: 297 WICYFGVNLLGIGLHSYGSF 316
>dbj|BAA84436.1| ycf5 [Arabidopsis thaliana] gi|7525084|ref|NP_051108.1| cytochrome
c biogenesis protein [Arabidopsis thaliana]
gi|6685287|sp|P56770|CCSA_ARATH Cytochrome c biogenesis
protein ccsA
Length = 328
Score = 467 bits (1201), Expect = e-130
Identities = 236/330 (71%), Positives = 273/330 (82%), Gaps = 9/330 (2%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVN--QIVGFYDSSKKGMIITFLCITGLLIT 58
MIFS LEHILTHISFSVVSIV++I+ +TL VN +I+GF+DSS KG+IITF ITGLL+T
Sbjct: 1 MIFSILEHILTHISFSVVSIVLTIYFLTLLVNLDEIIGFFDSSDKGIIITFFGITGLLLT 60
Query: 59 RWFFSGHLPFSDLYESLIFLSWGFSIFYMVPRF-KKQKNDLSTIIAPSVIFTQGFATSGL 117
RW +SGH P S+LYESLIFLSW FSI +MV F KKQ+N L+TI APSVIF QGFATSGL
Sbjct: 61 RWIYSGHFPLSNLYESLIFLSWAFSIIHMVSYFNKKQQNKLNTITAPSVIFIQGFATSGL 120
Query: 118 LTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKS-- 175
L +M QS ILVPALQS WLMMHVSMMILGY ALLCGSLLS+A+LVITF+++ P K
Sbjct: 121 LNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVGPTFWKKNI 180
Query: 176 KRLSFLYESFDYAEIKYINMNERNNVL--RKTSFSSYRNYYRYQFIQQLDRWGYRIISLG 233
K+ L E F + + YIN ERN++L + +FS RNYYRYQ IQQLD W +RIISLG
Sbjct: 181 KKNFLLNELFSFDVLYYIN--ERNSILLQQNINFSFSRNYYRYQLIQQLDFWSFRIISLG 238
Query: 234 FIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVA 293
FIFLT+GILSGAVWANE WGSYWNWDPKETWAFITWTIFAIYLH + N+ + G+NS+IVA
Sbjct: 239 FIFLTVGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVRGINSAIVA 298
Query: 294 SIGFLIIWICYFGVNLLGIGLHNYGSFTSN 323
IGF++IWICYFGVNLLGIGLH+YGSFTSN
Sbjct: 299 LIGFILIWICYFGVNLLGIGLHSYGSFTSN 328
>emb|CAC88095.1| ccsA protein [Atropa belladonna] gi|28261768|ref|NP_783281.1|
cytochrome c biogenesis protein [Atropa belladonna]
Length = 312
Score = 463 bits (1192), Expect = e-129
Identities = 233/322 (72%), Positives = 262/322 (81%), Gaps = 13/322 (4%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFSTLEHILTHISFS+VSIVI+IHLIT V++IV YDSS+KG+I+TF CITGLL+TRW
Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITFLVDEIVKLYDSSEKGIIVTFFCITGLLVTRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P SDLYESLIFLSW FS+ +++P FK LS I PS IFTQGFATSG+LTE
Sbjct: 61 ISSGHFPLSDLYESLIFLSWSFSLIHIIPYFKNNVLILSKITGPSAIFTQGFATSGILTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
+HQS ILVPALQS WL+MHVSMMILGYAALLCGSLLSVA+LVITF++ + KS F
Sbjct: 121 IHQSGILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRKLFYKSN--GF 178
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
+ ESF E NVL TSFS+ +NYYR Q IQQLD W YR+ISLGF FLTIG
Sbjct: 179 VNESFLLGE----------NVLENTSFSA-KNYYRSQLIQQLDYWSYRVISLGFTFLTIG 227
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITW +FAIYLH+R N L G NS+I+A+IGFLII
Sbjct: 228 ILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNINLRGANSAIIATIGFLII 287
Query: 301 WICYFGVNLLGIGLHNYGSFTS 322
WICYFGVNLLGIGLH+YGSFTS
Sbjct: 288 WICYFGVNLLGIGLHSYGSFTS 309
>emb|CAF28645.1| ccsA [Nymphaea alba] gi|50346834|ref|YP_053205.1| ccsA [Nymphaea
alba]
Length = 308
Score = 461 bits (1186), Expect = e-128
Identities = 226/323 (69%), Positives = 259/323 (79%), Gaps = 16/323 (4%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIF+TLEHILTHISFS++SIVI HL+TL V +IVG DSS+KGMI TF CITGLL+TRW
Sbjct: 1 MIFATLEHILTHISFSIISIVIPTHLMTL-VYEIVGLCDSSEKGMITTFFCITGLLVTRW 59
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
+SGH+P SDLYESL+FLSW FS+ ++VP F+ KN S I APS I TQGFATSGLLT+
Sbjct: 60 IYSGHVPLSDLYESLMFLSWSFSLIHIVPYFRNYKNFFSKITAPSAILTQGFATSGLLTK 119
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQS WLMMHVSMM+L YAALLCGSLLS+ +LVITF+ I I GK+ L
Sbjct: 120 MHQSAILVPALQSRWLMMHVSMMLLSYAALLCGSLLSITLLVITFRRKIDIFGKTNHL-- 177
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L SF + E +Y+N S+RNY+RYQ Q+LD W YR+I LGF LTIG
Sbjct: 178 LISSFSFDETQYVNF-------------SFRNYHRYQLTQRLDYWSYRVIGLGFTLLTIG 224
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITWT+FAIYLH+R NK L+G NS+IVAS+GFLII
Sbjct: 225 ILSGAVWANEAWGSYWNWDPKETWAFITWTVFAIYLHTRTNKSLQGANSAIVASMGFLII 284
Query: 301 WICYFGVNLLGIGLHNYGSFTSN 323
WICYFGVNLLG GLH+YGSFT N
Sbjct: 285 WICYFGVNLLGRGLHSYGSFTLN 307
>emb|CAD45156.1| ccsA [Amborella trichopoda] gi|34500963|ref|NP_904148.1|
hypothetical protein AmtrCp077 [Amborella trichopoda]
Length = 313
Score = 457 bits (1175), Expect = e-127
Identities = 222/320 (69%), Positives = 263/320 (81%), Gaps = 10/320 (3%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIF+TLEHILTHISFS++SIVI+ HL+T F +I G D S+KGMI FL ITGLL+TRW
Sbjct: 1 MIFATLEHILTHISFSIISIVITTHLMT-FAREIAGLSDLSEKGMIAVFLRITGLLVTRW 59
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
+SGHLP S+LYESLIFLSWGFS+ +M+ + + KN LS+I APS I TQGF TSGLLTE
Sbjct: 60 IYSGHLPLSNLYESLIFLSWGFSLIHMISKIQNHKNFLSSITAPSAILTQGFVTSGLLTE 119
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQSHWL+MHVSMM+L YAALLCGSLLS+A+LVITF++ + I +
Sbjct: 120 MHQSAILVPALQSHWLIMHVSMMLLSYAALLCGSLLSIALLVITFRKKLDI------IFL 173
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L F + EI+Y +NE+ ++L+ TSF S+RNY++YQ QQLD W YR+I +GF LT+G
Sbjct: 174 LIRLFSFGEIQY--LNEKRSILQNTSF-SFRNYHKYQLTQQLDHWSYRVIGIGFTLLTLG 230
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITWTI AIYLH+R NK L+ NS+IVASIGFLII
Sbjct: 231 ILSGAVWANEAWGSYWNWDPKETWAFITWTISAIYLHTRTNKNLQSANSAIVASIGFLII 290
Query: 301 WICYFGVNLLGIGLHNYGSF 320
WICYFGVNLLGIGLH+YGSF
Sbjct: 291 WICYFGVNLLGIGLHSYGSF 310
>emb|CAJ00808.1| cytochrome c bigenesis protein [Cucumis sativus]
Length = 322
Score = 453 bits (1166), Expect = e-126
Identities = 229/322 (71%), Positives = 256/322 (79%), Gaps = 5/322 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFST EHILTHISFSV+SIVI+I LITL +N+ VG Y SS+KGMI TF CITGLL+TRW
Sbjct: 1 MIFSTFEHILTHISFSVISIVITIQLITLLINETVGLYVSSEKGMIATFFCITGLLVTRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKN-DLSTIIAPSVIFTQGFATSGLLT 119
+ HLP SDLYESL+FLSW FSI ++ FK K S IFTQGFATSG LT
Sbjct: 61 IYLRHLPLSDLYESLLFLSWAFSIIHLFTYFKNIKTIKCKRNNRASTIFTQGFATSGFLT 120
Query: 120 EMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLS 179
EMH S +LVPALQSHWLMMHVSMM+LGYAALLCGSL SVA++VITFQ+ I I K+ L
Sbjct: 121 EMHPSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIFCKNNNL- 179
Query: 180 FLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTI 239
L F + EI+ IN E N +R TSF S +NYY+ Q IQQLD W RIISLGFIFL+I
Sbjct: 180 -LNALFSFNEIQSIN--EGNYFVRNTSFFSSKNYYKSQLIQQLDHWSCRIISLGFIFLSI 236
Query: 240 GILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLI 299
GILSGAVWANE WGSYWNWDPKETWAFITWTIFAIYLH+R NK EG+NS+IVAS+GFLI
Sbjct: 237 GILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMGFLI 296
Query: 300 IWICYFGVNLLGIGLHNYGSFT 321
IWICYFGVNLLGIGLH+YG FT
Sbjct: 297 IWICYFGVNLLGIGLHSYGPFT 318
>ref|YP_052814.1| heme attachment protein [Oryza nivara] gi|49615061|dbj|BAD26844.1|
heme attachment protein [Oryza nivara]
gi|52076914|dbj|BAD45926.1| cytochrome c biogenesis
protein [Oryza sativa (japonica cultivar-group)]
gi|52076628|dbj|BAD45529.1| cytochrome c biogenesis
protein [Oryza sativa (japonica cultivar-group)]
Length = 321
Score = 451 bits (1160), Expect = e-125
Identities = 217/321 (67%), Positives = 255/321 (78%), Gaps = 3/321 (0%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
M+F+TLEHILTHISFS +SIVI+IHLITL V ++ G DSS+KGMI TF CITG L++RW
Sbjct: 1 MLFATLEHILTHISFSTISIVITIHLITLLVRELGGLRDSSEKGMIATFFCITGFLVSRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P S+LYESLIFLSW I +M+P+ + KNDLSTI PS I TQGFATSGLLTE
Sbjct: 61 ASSGHFPLSNLYESLIFLSWALYILHMIPKIQNSKNDLSTITTPSTILTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQS WLMMHVSMM+L YA LLCGSLLS A+L+I F++ + K K+ +
Sbjct: 121 MHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLMIRFRKNLDFFSKKKK-NV 179
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L ++F + EI+Y + + L+ T F + NYY+YQ I++LD W YR+ISLGF LTIG
Sbjct: 180 LLKTFFFNEIEY--FYAKRSALKSTFFPLFPNYYKYQLIERLDSWSYRVISLGFTLLTIG 237
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
IL GAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSR N +G S+ VASIGFLII
Sbjct: 238 ILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTKSAFVASIGFLII 297
Query: 301 WICYFGVNLLGIGLHNYGSFT 321
WICYFG+NLLGIGLH+YGSFT
Sbjct: 298 WICYFGINLLGIGLHSYGSFT 318
>emb|CAA33952.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|11466846|ref|NP_039443.1| cytochrome c biogenesis
protein [Oryza sativa (japonica cultivar-group)]
gi|82524|pir||JQ0288 cytochrome c-type synthesis protein
protein homolog - rice chloroplast
gi|140298|sp|P12215|CCSA_ORYSA Cytochrome c biogenesis
protein ccsA gi|226669|prf||1603356CW ORF 321
Length = 321
Score = 451 bits (1159), Expect = e-125
Identities = 217/321 (67%), Positives = 255/321 (78%), Gaps = 3/321 (0%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
M+F+TLEHILTHISFS +SIVI+IHLITL V ++ G DSS+KGMI TF CITG L++RW
Sbjct: 1 MLFATLEHILTHISFSTISIVITIHLITLLVRELGGLRDSSEKGMIATFFCITGFLVSRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P S+LYESLIFLSW I +M+P+ + KNDLSTI PS I TQGFATSGLLTE
Sbjct: 61 ASSGHFPLSNLYESLIFLSWALYILHMIPKIQNSKNDLSTITTPSTILTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQS WLMMHVSMM+L YA LLCGSLLS A+L+I F++ + K K+ +
Sbjct: 121 MHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLMIRFRKNLDFFSKKKK-NV 179
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L ++F + EI+Y + + L+ T F + NYY+YQ I++LD W YR+ISLGF LTIG
Sbjct: 180 LSKTFFFNEIEY--FYAKRSALKSTFFPLFPNYYKYQLIERLDSWSYRVISLGFTLLTIG 237
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
IL GAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSR N +G S+ VASIGFLII
Sbjct: 238 ILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTKSAFVASIGFLII 297
Query: 301 WICYFGVNLLGIGLHNYGSFT 321
WICYFG+NLLGIGLH+YGSFT
Sbjct: 298 WICYFGINLLGIGLHSYGSFT 318
>emb|CAA60348.1| hypothetical protein [Zea mays] gi|11467254|ref|NP_043086.1|
cytochrome c biogenesis protein [Zea mays]
gi|1363550|pir||S58614 cytochrome c-type synthesis
protein homolog - maize chloroplast
gi|1175647|sp|P46659|CCSA_MAIZE CYTOCHROME C BIOGENESIS
PROTEIN CCSA
Length = 321
Score = 447 bits (1149), Expect = e-124
Identities = 214/321 (66%), Positives = 254/321 (78%), Gaps = 4/321 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
M+F+TLEHILTHISFS +SIVI+IHLITL V ++ G DSS+KGMI TF ITG L++RW
Sbjct: 1 MLFATLEHILTHISFSTISIVITIHLITLLVRELRGLRDSSEKGMIATFFSITGFLVSRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P S+LYESLIFLSW I + +P+ + KNDLSTI PS I TQGFATSGLLTE
Sbjct: 61 VSSGHFPLSNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQS WLMMHVSMM+L YA LLCGSLLS A+L+I F++ K +
Sbjct: 121 MHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRKNFDFFSLKKNV-- 178
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
++F ++EI+Y + + + L+ TSF + NYY+YQ ++LD W YR+ISLGF LT+G
Sbjct: 179 FLKTFFFSEIEY--LYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVG 236
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
IL GAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKN +G NS++VASIGFLII
Sbjct: 237 ILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNPNWKGTNSALVASIGFLII 296
Query: 301 WICYFGVNLLGIGLHNYGSFT 321
WICYFG+NLLGIGLH+YGSFT
Sbjct: 297 WICYFGINLLGIGLHSYGSFT 317
>gb|AAT44652.1| c-type cytochrome biogenesis protein [Saccharum hybrid cultivar
SP-80-3280] gi|50812593|ref|YP_054694.1| c-type
cytochrome synthesis [Saccharum officinarum]
gi|48478730|ref|YP_024337.1| c-type cytochrome
biogenesis protein [Saccharum hybrid cultivar
SP-80-3280] gi|49659577|dbj|BAD27358.1| c-type
cytochrome synthesis [Saccharum officinarum]
Length = 321
Score = 446 bits (1146), Expect = e-124
Identities = 214/321 (66%), Positives = 253/321 (78%), Gaps = 4/321 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
M+F+TLEHILTHISFS +SIVI+IHLITL V ++ G DSS+KGMI TF ITG L++RW
Sbjct: 1 MLFATLEHILTHISFSTISIVITIHLITLLVRELRGLRDSSEKGMIATFFSITGFLVSRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P S+LYESLIFLSW I + +P+ + KNDLSTI PS I TQGFATSGLLTE
Sbjct: 61 VSSGHFPLSNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQS WLMMHVSMM+L YA LLCGSLLS A+L+I F+ K +
Sbjct: 121 MHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRNSFDFFSLKKNV-- 178
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L ++F ++EI+Y + + + L+ TSF + NYY+YQ ++LD W YR+ISLGF LT+G
Sbjct: 179 LRKTFFFSEIEY--LYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVG 236
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
IL GAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSR N +G NS++VASIGFLII
Sbjct: 237 ILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTNSALVASIGFLII 296
Query: 301 WICYFGVNLLGIGLHNYGSFT 321
WICYFG+NLLGIGLH+YGSFT
Sbjct: 297 WICYFGINLLGIGLHSYGSFT 317
>ref|NP_114307.1| cytochrome c biogenesis protein [Triticum aestivum]
gi|17373434|sp|P58266|CCSA_WHEAT Cytochrome c biogenesis
protein ccsA gi|13928255|dbj|BAB47084.1| ycf5 [Triticum
aestivum]
Length = 322
Score = 432 bits (1112), Expect = e-120
Identities = 209/321 (65%), Positives = 251/321 (78%), Gaps = 3/321 (0%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
M+F+TLEHILTHISFS +SIVI+IHLITL V ++ G DSS+KGMI+TF ITG L++RW
Sbjct: 1 MLFATLEHILTHISFSTISIVITIHLITLLVRELGGLRDSSEKGMIVTFFSITGFLVSRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P S+LYESLI LSW I + +P+ + KNDLSTI PS I TQGFATSGLLTE
Sbjct: 61 ASSGHFPLSNLYESLISLSWALYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQS ILVPALQS WLMMHVSMM+L YA LL G LS AIL+I F+ K K+ +
Sbjct: 121 MHQSTILVPALQSQWLMMHVSMMLLSYATLLGGPPLSAAILIIRFRNNFHFFSKKKK-NV 179
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
L ++F +++IKY + + L++TS S+ NYY+YQ ++LD W YR+ISLGF LT G
Sbjct: 180 LNKTFLFSDIKY--FYAKRSALKRTSVPSFPNYYKYQLTERLDSWSYRVISLGFTLLTGG 237
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
IL GAVWANEAWG+YWNWDPKETWAFITWTIFAIYLHSR + +G NS+++ASIGFLII
Sbjct: 238 ILGGAVWANEAWGAYWNWDPKETWAFITWTIFAIYLHSRTHPNWKGTNSALIASIGFLII 297
Query: 301 WICYFGVNLLGIGLHNYGSFT 321
WICYFG+NLLGIGLH+YGSFT
Sbjct: 298 WICYFGINLLGIGLHSYGSFT 318
>gb|AAS46091.1| cytochrome c biogenesis protein [Oryza sativa (indica
cultivar-group)]
Length = 285
Score = 400 bits (1027), Expect = e-110
Identities = 191/283 (67%), Positives = 223/283 (78%), Gaps = 3/283 (1%)
Query: 39 DSSKKGMIITFLCITGLLITRWFFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDL 98
DSS+KGMI TF CITG L++RW SGH P S+LYESLIFLSW I +M+P+ + KNDL
Sbjct: 3 DSSEKGMIATFFCITGFLVSRWASSGHFPLSNLYESLIFLSWALYILHMIPKIQNSKNDL 62
Query: 99 STIIAPSVIFTQGFATSGLLTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSV 158
STI PS I TQGFATSGLLTEMHQS ILVPALQS WLMMHVSMM+L YA LLCGSLLS
Sbjct: 63 STITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSA 122
Query: 159 AILVITFQELIPILGKSKRLSFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQF 218
A+L+I F++ + K K+ + L ++F + EI+Y + + L+ T F + NYY+YQ
Sbjct: 123 ALLMIRFRKNLDFFSKKKK-NVLLKTFFFNEIEYFYA--KRSALKSTFFPLFPNYYKYQL 179
Query: 219 IQQLDRWGYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHS 278
I++LD W YR+ISLGF LTIGIL GAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHS
Sbjct: 180 IERLDSWSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHS 239
Query: 279 RKNKKLEGLNSSIVASIGFLIIWICYFGVNLLGIGLHNYGSFT 321
R N +G S+ VASIGFLIIWICYFG+NLLGIGLH+YGSFT
Sbjct: 240 RTNPNWKGTKSAFVASIGFLIIWICYFGINLLGIGLHSYGSFT 282
>gb|AAS46156.1| cytochrome c biogenesis protein [Oryza sativa (japonica
cultivar-group)] gi|42795654|gb|AAS46219.1| cytochrome c
biogenesis protein [Oryza sativa (japonica
cultivar-group)]
Length = 277
Score = 389 bits (1000), Expect = e-107
Identities = 186/277 (67%), Positives = 217/277 (78%), Gaps = 3/277 (1%)
Query: 45 MIITFLCITGLLITRWFFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAP 104
MI TF CITG L++RW SGH P S+LYESLIFLSW I +M+P+ + KNDLSTI P
Sbjct: 1 MIATFFCITGFLVSRWASSGHFPLSNLYESLIFLSWALYILHMIPKIQNSKNDLSTITTP 60
Query: 105 SVIFTQGFATSGLLTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVIT 164
S I TQGFATSGLLTEMHQS ILVPALQS WLMMHVSMM+L YA LLCGSLLS A+L+I
Sbjct: 61 STILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLMIR 120
Query: 165 FQELIPILGKSKRLSFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDR 224
F++ + K K+ + L ++F + EI+Y + + L+ T F + NYY+YQ I++LD
Sbjct: 121 FRKNLDFFSKKKK-NVLSKTFFFNEIEYFYA--KRSALKSTFFPLFPNYYKYQLIERLDS 177
Query: 225 WGYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKL 284
W YR+ISLGF LTIGIL GAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSR N
Sbjct: 178 WSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNW 237
Query: 285 EGLNSSIVASIGFLIIWICYFGVNLLGIGLHNYGSFT 321
+G S+ VASIGFLIIWICYFG+NLLGIGLH+YGSFT
Sbjct: 238 KGTKSAFVASIGFLIIWICYFGINLLGIGLHSYGSFT 274
>ref|NP_042493.1| cytochrome c biogenesis protein [Pinus thunbergii]
gi|7432729|pir||T07572 hypothetical protein 320 -
Japanese black pine chloroplast
gi|1262733|dbj|BAA04448.1| ORF320 [Pinus thunbergii]
gi|1175648|sp|P41650|CCSA_PINTH CYTOCHROME C BIOGENESIS
PROTEIN CCSA
Length = 320
Score = 344 bits (883), Expect = 2e-93
Identities = 178/324 (54%), Positives = 224/324 (68%), Gaps = 14/324 (4%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIF TLEHIL HISFS++ +V I+ TL V +I G S KGMI+TFLC TGLLI RW
Sbjct: 1 MIFITLEHILAHISFSLILVVTLIYWGTL-VYRIEGLSSSGGKGMIVTFLCTTGLLINRW 59
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKND-LSTIIAPSVIFTQGFATSGLLT 119
+SGHLP S+LYES +FLSW S+F+++ + + + L I APS + T GFAT GL
Sbjct: 60 LYSGHLPLSNLYESFMFLSWSSSVFHILLEVRSRDDRWLGAITAPSAMLTHGFATLGLPE 119
Query: 120 EMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLS 179
EM +S +LVPALQSHW MMHVSM++ YA LLCGSL S+A+LVI + G ++++
Sbjct: 120 EMQRSGMLVPALQSHWSMMHVSMILFSYATLLCGSLASIALLVI-------MSGVNRQVI 172
Query: 180 F-----LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGF 234
F L+ + + ++ + L+ T + S NY + Q I+QLD W YR I LGF
Sbjct: 173 FGAMDNLFSRAILPNENFYSHEKQKSDLQYTVYFSSTNYRKCQLIKQLDHWSYRAIGLGF 232
Query: 235 IFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVAS 294
TIG LSGA+WANEAWGSYW+WDPKETWA ITWTIFAIYLH+R NK +G +IVAS
Sbjct: 233 SLSTIGTLSGAIWANEAWGSYWSWDPKETWALITWTIFAIYLHTRMNKGWQGEEPAIVAS 292
Query: 295 IGFLIIWICYFGVNLLGIGLHNYG 318
+GF I+WI Y GVNLLGIGLH+YG
Sbjct: 293 LGFFIVWIRYLGVNLLGIGLHSYG 316
>emb|CAA28133.1| unnamed protein product [Marchantia polymorpha]
gi|81353|pir||A05023 cytochrome c-type synthesis protein
homolog - liverwort (Marchantia polymorpha) chloroplast
gi|11466751|ref|NP_039347.1| cytochrome c biogenesis
protein [Marchantia polymorpha]
gi|140297|sp|P12214|CCSA_MARPO Cytochrome c biogenesis
protein ccsA
Length = 320
Score = 317 bits (812), Expect = 3e-85
Identities = 166/320 (51%), Positives = 210/320 (64%), Gaps = 5/320 (1%)
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
M F TLE IL H SF ++ V I+ I + M I IT L+ RW
Sbjct: 1 MPFITLERILAHTSFFLLFFVTFIYWGKFLYINIKPITILGEISMKIACFFITTFLLIRW 60
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
SGH P S+LYES +FLSW F++ +++ K + L I APS + T GFAT L E
Sbjct: 61 SSSGHFPLSNLYESSMFLSWSFTLIHLILENKSKNTWLGIITAPSAMLTHGFATLSLPKE 120
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITF--QELIPILGKSKRL 178
M +SV LVPALQSHWLMMHV+MM+L Y+ LLCGSLL++ IL+IT Q+ +PIL +
Sbjct: 121 MQESVFLVPALQSHWLMMHVTMMMLSYSTLLCGSLLAITILIITLTKQKNLPIL--TSYF 178
Query: 179 SFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLT 238
+F + SF + + NE + + FS + N+ ++Q I++LD W YR+ISLGF LT
Sbjct: 179 NFPFNSFIFKNLLQPMENEILSYKTQKVFS-FINFRKWQLIKELDNWSYRVISLGFPLLT 237
Query: 239 IGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFL 298
IGILSGAVWANEAWGSYWNWDPKETWA ITW IFAIYLH+R K +G +I+AS+GF
Sbjct: 238 IGILSGAVWANEAWGSYWNWDPKETWALITWLIFAIYLHTRMIKGWQGKKPAIIASLGFF 297
Query: 299 IIWICYFGVNLLGIGLHNYG 318
I+WICY GVNLLG GLH+YG
Sbjct: 298 IVWICYLGVNLLGKGLHSYG 317
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.329 0.142 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 533,773,152
Number of Sequences: 2540612
Number of extensions: 21916004
Number of successful extensions: 83338
Number of sequences better than 10.0: 580
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 82171
Number of HSP's gapped (non-prelim): 842
length of query: 323
length of database: 863,360,394
effective HSP length: 128
effective length of query: 195
effective length of database: 538,162,058
effective search space: 104941601310
effective search space used: 104941601310
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 75 (33.5 bits)
Description of BAB33244.1