BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33231.1 134 aa
(134 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB33231.1| ribosomal protein S8 [Lotus corniculatus var. ja... 267 4e-71
gb|AAN04895.1| ribosomal protein S8 [Vigna angularis] gi|2421227... 233 8e-61
emb|CAJ00794.1| ribosomal protein S8 [Cucumis sativus] 229 1e-59
ref|YP_087001.1| ribosomal protein S8 [Panax ginseng] gi|5123534... 220 7e-57
emb|CAA77378.1| ribosomal protein S8 [Nicotiana tabacum] gi|1146... 219 1e-56
dbj|BAA84420.1| ribosomal protein S8 [Arabidopsis thaliana] gi|7... 219 1e-56
emb|CAC88079.1| ribosomal protein S8 [Atropa belladonna] gi|2826... 218 3e-56
emb|CAB88763.1| ribosomal protein S8 [Spinacia oleracea] gi|6606... 214 5e-55
emb|CAB67195.1| ribosomal protein S8 [Oenothera elata subsp. hoo... 207 4e-53
emb|CAD28756.1| ribosomal protein S8 [Calycanthus floridus var. ... 207 6e-53
emb|CAF28630.1| ribosomal protein S8 [Nymphaea alba] gi|50346819... 203 6e-52
emb|CAD45142.1| ribosomal protein S8 [Amborella trichopoda] gi|3... 201 3e-51
emb|CAA60321.1| ribosomal protein S8 [Zea mays] gi|12454|emb|CAA... 200 5e-51
emb|CAA33931.1| ribosomal protein S8 [Oryza sativa (japonica cul... 200 5e-51
ref|NP_114293.1| ribosomal protein S8 [Triticum aestivum] gi|242... 198 2e-50
ref|XP_479423.1| Chloroplast 50S ribosomal protein S8 [Oryza sat... 198 3e-50
dbj|BAD81963.1| Chloroplast ribosomal protein S8 [Oryza sativa (... 197 5e-50
ref|XP_450631.1| putative ribosomal protein S8 [Oryza sativa (ja... 194 3e-49
gb|AAA65862.1| ribosomal protein S8 [Epifagus virginiana] gi|114... 189 1e-47
gb|AAO74072.1| ribosomal protein S8 [Pinus koraiensis] gi|295656... 179 1e-44
>dbj|BAB33231.1| ribosomal protein S8 [Lotus corniculatus var. japonicus]
gi|13518473|ref|NP_084832.1| ribosomal protein S8 [Lotus
corniculatus var. japonicus]
gi|24212276|sp|Q9BBQ1|RR8_LOTJA Chloroplast 30S
ribosomal protein S8
Length = 134
Score = 267 bits (683), Expect = 4e-71
Identities = 134/134 (100%), Positives = 134/134 (100%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV
Sbjct: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RLEKIGGEVLCYIW
Sbjct: 121 RLEKIGGEVLCYIW 134
>gb|AAN04895.1| ribosomal protein S8 [Vigna angularis]
gi|24212272|sp|P59033|RR8_PHAAN Chloroplast 30S
ribosomal protein S8
Length = 134
Score = 233 bits (594), Expect = 8e-61
Identities = 116/134 (86%), Positives = 124/134 (91%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIA+IIT IRNADMN+K VQ+PFTNITE VKILLREGF+EN+RKHRE++K FLV
Sbjct: 1 MGKDTIANIITYIRNADMNKKGMVQLPFTNITEKIVKILLREGFVENIRKHRENNKYFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLRYRRN K S K FLNLKRISTPGLRIYYNYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61 LTLRYRRNRKESSKNFLNLKRISTPGLRIYYNYQQIPRILGGMGIVILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RLEKIGGEVLCYIW
Sbjct: 121 RLEKIGGEVLCYIW 134
>emb|CAJ00794.1| ribosomal protein S8 [Cucumis sativus]
Length = 134
Score = 229 bits (584), Expect = 1e-59
Identities = 116/134 (86%), Positives = 122/134 (90%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIA+IITSIRNADMNRK V+IP TNITEN VKILLREGFIENVRKHRES+K F V
Sbjct: 1 MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN KG YKT LNLKRIS PGLRIY NYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61 LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RL+ IGGE+LCYIW
Sbjct: 121 RLQGIGGEILCYIW 134
>ref|YP_087001.1| ribosomal protein S8 [Panax ginseng] gi|51235348|gb|AAT98544.1|
ribosomal protein S8 [Panax ginseng]
Length = 134
Score = 220 bits (560), Expect = 7e-57
Identities = 109/134 (81%), Positives = 121/134 (89%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTIADIITSIRNADM++KR V+I TNITEN VKILLREGFIENVRKH+E+ K FLV
Sbjct: 1 MGRDTIADIITSIRNADMDKKRVVRIASTNITENVVKILLREGFIENVRKHQENKKDFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN K Y+ LNLKRIS PGLRIY NYQ+IPRILGG+GIVILSTSRGIMTDREA
Sbjct: 61 LTLRHRRNRKRPYRNILNLKRISRPGLRIYSNYQRIPRILGGIGIVILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RLE+IGGE+LCYIW
Sbjct: 121 RLERIGGEILCYIW 134
>emb|CAA77378.1| ribosomal protein S8 [Nicotiana tabacum]
gi|11465992|ref|NP_054534.1| ribosomal protein S8
[Nicotiana tabacum] gi|70913|pir||R3NT8 ribosomal
protein S8 - common tobacco chloroplast
gi|134025|sp|P06363|RR8_TOBAC Chloroplast 30S ribosomal
protein S8 gi|225232|prf||1211235BP ribosomal protein S8
Length = 134
Score = 219 bits (557), Expect = 1e-56
Identities = 110/134 (82%), Positives = 120/134 (89%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTIA+IITSIRNADM+RKR V+I TNITEN V+ILLREGFIENVRKHRE +K FLV
Sbjct: 1 MGRDTIAEIITSIRNADMDRKRVVRIASTNITENIVQILLREGFIENVRKHREKNKYFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN K Y+ LNLKRIS PGLRIY NYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61 LTLRHRRNRKRPYRNILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RLE IGGE+LCYIW
Sbjct: 121 RLEGIGGEILCYIW 134
>dbj|BAA84420.1| ribosomal protein S8 [Arabidopsis thaliana]
gi|7525068|ref|NP_051093.1| ribosomal protein S8
[Arabidopsis thaliana] gi|6685916|sp|P56801|RR8_ARATH
Chloroplast 30S ribosomal protein S8
Length = 134
Score = 219 bits (557), Expect = 1e-56
Identities = 110/134 (82%), Positives = 123/134 (91%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIADIITSIRNADMNRK TV+I TNITE+ VKILLREGFIENVRKHRE+++ FL+
Sbjct: 1 MGKDTIADIITSIRNADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRENNQYFLI 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN K SYKT LNLKRIS PGLRIY N Q+IPRILGG+GIVILSTS+GIMTDREA
Sbjct: 61 LTLRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RL++IGGE+LCYIW
Sbjct: 121 RLKRIGGEILCYIW 134
>emb|CAC88079.1| ribosomal protein S8 [Atropa belladonna]
gi|28261752|ref|NP_783266.1| ribosomal protein S8
[Atropa belladonna] gi|24212273|sp|Q8S8V8|RR8_ATRBE
Chloroplast 30S ribosomal protein S8
Length = 134
Score = 218 bits (554), Expect = 3e-56
Identities = 109/134 (81%), Positives = 121/134 (89%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTIA+IITSIRNADM+RKR V+I TNITEN V+ILLREGFIENVRKH+E++K FLV
Sbjct: 1 MGRDTIAEIITSIRNADMDRKRVVRIASTNITENIVQILLREGFIENVRKHQENNKYFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN K Y+ LNLKRIS PGLRIY NYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61 LTLRHRRNKKRPYRNILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RLE IGGE+LCYIW
Sbjct: 121 RLEGIGGEILCYIW 134
>emb|CAB88763.1| ribosomal protein S8 [Spinacia oleracea] gi|6606536|gb|AAF19197.1|
ribosomal protein S8 [Spinacia oleracea]
gi|11497562|ref|NP_054970.1| ribosomal protein S8
[Spinacia oleracea] gi|14286152|sp|P09597|RR8_SPIOL
Chloroplast 30S ribosomal protein S8
Length = 134
Score = 214 bits (544), Expect = 5e-55
Identities = 108/134 (80%), Positives = 116/134 (85%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIADIIT IRNADMNRK TV+I TNITEN VKILLREGFIEN RKH+E +K FLV
Sbjct: 1 MGKDTIADIITCIRNADMNRKGTVRIVSTNITENIVKILLREGFIENARKHQERNKYFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN KG Y +LKR+S PGLRIY NYQ+IPRILGGMGI ILSTSRGIMTDREA
Sbjct: 61 LTLRHRRNKKGPYLNTFHLKRVSRPGLRIYSNYQRIPRILGGMGIAILSTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RLE IGGE+LCYIW
Sbjct: 121 RLEGIGGEILCYIW 134
>emb|CAB67195.1| ribosomal protein S8 [Oenothera elata subsp. hookeri]
gi|13518369|ref|NP_084728.1| ribosomal protein S8
[Oenothera elata subsp. hookeri]
gi|24212277|sp|Q9MTJ0|RR8_OENHO Chloroplast 30S
ribosomal protein S8
Length = 138
Score = 207 bits (527), Expect = 4e-53
Identities = 108/138 (78%), Positives = 118/138 (85%), Gaps = 4/138 (2%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTIADIITSIRN DMNRK TV+I TN+ + VKILLREGFIENVRKH+E+ KSFLV
Sbjct: 1 MGRDTIADIITSIRNVDMNRKGTVRIESTNMPKEIVKILLREGFIENVRKHQENKKSFLV 60
Query: 61 LTLRYRRNTKGSYKTF----LNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMT 116
LTLR+RRN KG + LNLKRIS PGLR+Y NYQKIPRILGGMGIVILSTSRGIMT
Sbjct: 61 LTLRHRRNRKGPSPSRTSLNLNLKRISRPGLRVYSNYQKIPRILGGMGIVILSTSRGIMT 120
Query: 117 DREARLEKIGGEVLCYIW 134
DREARLE IGGE+LCYIW
Sbjct: 121 DREARLEGIGGEILCYIW 138
>emb|CAD28756.1| ribosomal protein S8 [Calycanthus floridus var. glaucus]
gi|32480878|ref|NP_862789.1| ribosomal protein S8
[Calycanthus floridus var. glaucus]
Length = 132
Score = 207 bits (526), Expect = 6e-53
Identities = 105/134 (78%), Positives = 120/134 (89%), Gaps = 2/134 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTIADI+TSIRNA+M++K TV+I TNITEN VKILLREGFIENVRKH+E++K FLV
Sbjct: 1 MGRDTIADILTSIRNANMDKKGTVRIASTNITENIVKILLREGFIENVRKHQENNKYFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
TL++RRN KG Y+T LKRIS PGLRIY NYQ+IPRILGGMGIVILSTS+GIMTDREA
Sbjct: 61 STLQHRRNRKGRYRTI--LKRISRPGLRIYSNYQRIPRILGGMGIVILSTSQGIMTDREA 118
Query: 121 RLEKIGGEVLCYIW 134
RLE IGGE+LCYIW
Sbjct: 119 RLEGIGGEILCYIW 132
>emb|CAF28630.1| ribosomal protein S8 [Nymphaea alba] gi|50346819|ref|YP_053190.1|
ribosomal protein S8 [Nymphaea alba]
Length = 132
Score = 203 bits (517), Expect = 6e-52
Identities = 104/134 (77%), Positives = 118/134 (87%), Gaps = 2/134 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTIADIIT IRNADM++K TV+IP TNITEN VKILLREGFIENVRKHRE++K FLV
Sbjct: 1 MGRDTIADIITYIRNADMDKKGTVRIPSTNITENIVKILLREGFIENVRKHRENNKDFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN K +Y+ LKRIS PGLRIY N Q+IPRI GG+G+VILSTSRGIMTDREA
Sbjct: 61 LTLRHRRNRKRAYRNI--LKRISRPGLRIYSNSQRIPRISGGIGVVILSTSRGIMTDREA 118
Query: 121 RLEKIGGEVLCYIW 134
RLE+IGGE+L YIW
Sbjct: 119 RLERIGGEILFYIW 132
>emb|CAD45142.1| ribosomal protein S8 [Amborella trichopoda]
gi|34500949|ref|NP_904134.1| ribosomal protein S8
[Amborella trichopoda]
Length = 132
Score = 201 bits (511), Expect = 3e-51
Identities = 101/134 (75%), Positives = 118/134 (87%), Gaps = 2/134 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTIA+IIT IRNADM++KR V+I TNITEN VKI+L+EGFIENVRKHRE++K+FLV
Sbjct: 1 MGRDTIANIITCIRNADMDKKRMVRIASTNITENIVKIILQEGFIENVRKHRENNKNFLV 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR++RN KG+Y+ LKRIS GLRIY NYQ+IPRI GGMG+VILSTSRGIMTDREA
Sbjct: 61 LTLRHKRNRKGTYRK--TLKRISRSGLRIYSNYQRIPRISGGMGVVILSTSRGIMTDREA 118
Query: 121 RLEKIGGEVLCYIW 134
R E IGGE+LCYIW
Sbjct: 119 RREGIGGEILCYIW 132
>emb|CAA60321.1| ribosomal protein S8 [Zea mays] gi|12454|emb|CAA29913.1| ribosomal
protein S8 (AA 1-136) [Zea mays]
gi|48478707|gb|AAT44727.1| ribosomal protein S8
[Saccharum hybrid cultivar SP-80-3280]
gi|50812563|ref|YP_054665.1| ribosomal protein S8
[Saccharum officinarum] gi|11467227|ref|NP_043059.1|
ribosomal protein S8 [Zea mays]
gi|48478805|ref|YP_024412.1| ribosomal protein S8
[Saccharum hybrid cultivar SP-80-3280]
gi|70915|pir||R3ZMBC ribosomal protein S8 - maize
chloroplast gi|49659547|dbj|BAD27328.1| ribosomal
protein S8 [Saccharum officinarum]
gi|134018|sp|P08530|RR8_MAIZE Chloroplast 30S ribosomal
protein S8
Length = 136
Score = 200 bits (509), Expect = 5e-51
Identities = 102/136 (75%), Positives = 117/136 (86%), Gaps = 2/136 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIAD++TSIRNADMN+K TV++ TNITEN VKILLREGFIE+VRKH+ES++ FLV
Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRKHQESNRYFLV 60
Query: 61 LTLRY--RRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDR 118
TLR+ R+ KG Y+T LKRIS PGLRIY NYQ IP++LGGMGI ILSTSRGIMTDR
Sbjct: 61 STLRHQRRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDR 120
Query: 119 EARLEKIGGEVLCYIW 134
EARL +IGGEVLCYIW
Sbjct: 121 EARLNRIGGEVLCYIW 136
>emb|CAA33931.1| ribosomal protein S8 [Oryza sativa (japonica cultivar-group)]
gi|50942983|ref|XP_481019.1| ribosomal protein S8 [Oryza
sativa (japonica cultivar-group)]
gi|51964794|ref|XP_507181.1| PREDICTED OSJNBa0036E18.24
gene product [Oryza sativa (japonica cultivar-group)]
gi|11466825|ref|NP_039421.1| ribosomal protein S8 [Oryza
sativa (japonica cultivar-group)]
gi|50234007|ref|YP_052785.1| ribosomal protein S8 [Oryza
nivara] gi|42795579|gb|AAS46145.1| ribosomal protein S8;
rps8 [Oryza sativa (japonica cultivar-group)]
gi|42795643|gb|AAS46208.1| ribosomal protein S8; grps8
[Oryza sativa (japonica cultivar-group)]
gi|42795512|gb|AAS46079.1| ribosomal protein S8; rps8
[Oryza sativa (indica cultivar-group)]
gi|40253572|dbj|BAD05518.1| ribosomal protein S8 [Oryza
sativa (japonica cultivar-group)] gi|70914|pir||R3RZ8
ribosomal protein S8 - rice chloroplast
gi|49615031|dbj|BAD26814.1| ribosomal protein S8 [Oryza
nivara] gi|134022|sp|P12148|RR8_ORYSA Chloroplast 30S
ribosomal protein S8 gi|226643|prf||1603356BT ribosomal
protein S8
Length = 136
Score = 200 bits (509), Expect = 5e-51
Identities = 102/136 (75%), Positives = 117/136 (86%), Gaps = 2/136 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIAD++TSIRNADMN+K TV++ TNITEN VKILLREGFIE+VRKH+ES++ FLV
Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRKHQESNRYFLV 60
Query: 61 LTLRY--RRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDR 118
TLR+ R+ KG Y+T LKRIS PGLRIY NYQ IP++LGGMGI ILSTSRGIMTDR
Sbjct: 61 STLRHQKRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDR 120
Query: 119 EARLEKIGGEVLCYIW 134
EARL +IGGEVLCYIW
Sbjct: 121 EARLNRIGGEVLCYIW 136
>ref|NP_114293.1| ribosomal protein S8 [Triticum aestivum]
gi|24212275|sp|Q95H52|RR8_WHEAT Chloroplast 30S
ribosomal protein S8 gi|13928240|dbj|BAB47069.1|
ribosomal protein S8 [Triticum aestivum]
Length = 136
Score = 198 bits (504), Expect = 2e-50
Identities = 101/136 (74%), Positives = 116/136 (85%), Gaps = 2/136 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIAD++TSIRNADMN+K TV++ TNITEN VKILLREGFIE+VRKH+E ++ FLV
Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRKHQERNRYFLV 60
Query: 61 LTLRY--RRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDR 118
TLR+ R+ KG Y+T LKRIS PGLRIY NYQ IP++LGGMGI ILSTSRGIMTDR
Sbjct: 61 STLRHQKRKTRKGIYRTRTFLKRISRPGLRIYTNYQGIPKVLGGMGIAILSTSRGIMTDR 120
Query: 119 EARLEKIGGEVLCYIW 134
EARL +IGGEVLCYIW
Sbjct: 121 EARLNRIGGEVLCYIW 136
>ref|XP_479423.1| Chloroplast 50S ribosomal protein S8 [Oryza sativa (japonica
cultivar-group)] gi|50510230|dbj|BAD31428.1| Chloroplast
50S ribosomal protein S8 [Oryza sativa (japonica
cultivar-group)] gi|22296315|dbj|BAC10086.1| Chloroplast
50S ribosomal protein S8 [Oryza sativa (japonica
cultivar-group)]
Length = 136
Score = 198 bits (503), Expect = 3e-50
Identities = 101/136 (74%), Positives = 116/136 (85%), Gaps = 2/136 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIAD++TSIRNADMN+K V++ TNITEN VKILLREGFIE+VRKH+ES++ FLV
Sbjct: 1 MGKDTIADLLTSIRNADMNKKGIVRVVSTNITENIVKILLREGFIESVRKHQESNRYFLV 60
Query: 61 LTLRY--RRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDR 118
TLR+ R+ KG Y+T LKRIS PGLRIY NYQ IP++LGGMGI ILSTSRGIMTDR
Sbjct: 61 STLRHQKRKTRKGIYRTRTFLKRISRPGLRIYTNYQGIPKVLGGMGIAILSTSRGIMTDR 120
Query: 119 EARLEKIGGEVLCYIW 134
EARL +IGGEVLCYIW
Sbjct: 121 EARLNRIGGEVLCYIW 136
>dbj|BAD81963.1| Chloroplast ribosomal protein S8 [Oryza sativa (japonica
cultivar-group)]
Length = 136
Score = 197 bits (501), Expect = 5e-50
Identities = 101/136 (74%), Positives = 116/136 (85%), Gaps = 2/136 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIAD++TSIRNADMN+K TV++ TNITEN VKILLREGFIE+V KH+ES++ FLV
Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVWKHQESNRYFLV 60
Query: 61 LTLRY--RRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDR 118
TLR+ R+ KG Y+T LKRIS PGLRIY NYQ IP++LGGMGI ILSTSRGIMTDR
Sbjct: 61 STLRHQKRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDR 120
Query: 119 EARLEKIGGEVLCYIW 134
EARL +IGGEVLCYIW
Sbjct: 121 EARLNRIGGEVLCYIW 136
>ref|XP_450631.1| putative ribosomal protein S8 [Oryza sativa (japonica
cultivar-group)] gi|50726204|dbj|BAD33723.1| putative
ribosomal protein S8 [Oryza sativa (japonica
cultivar-group)] gi|50725919|dbj|BAD33447.1| putative
ribosomal protein S8 [Oryza sativa (japonica
cultivar-group)]
Length = 136
Score = 194 bits (494), Expect = 3e-49
Identities = 99/136 (72%), Positives = 116/136 (84%), Gaps = 2/136 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MGKDTIAD++TSIRN+DMN+K TV++ TNITEN VKILLREGFIE+VRKH+ES++ FLV
Sbjct: 1 MGKDTIADLLTSIRNSDMNKKGTVRVVSTNITENIVKILLREGFIESVRKHQESNRYFLV 60
Query: 61 LTLRY--RRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDR 118
TLR+ R+ KG Y+T LK IS PGLRIY NYQ IP++LGGMGI ILSTSRGIMTD+
Sbjct: 61 STLRHQKRKTRKGIYRTRTFLKCISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDQ 120
Query: 119 EARLEKIGGEVLCYIW 134
EARL +IGGEVLCYIW
Sbjct: 121 EARLNRIGGEVLCYIW 136
>gb|AAA65862.1| ribosomal protein S8 [Epifagus virginiana]
gi|11466967|ref|NP_054388.1| ribosomal protein S8
[Epifagus virginiana] gi|7440248|pir||S78393 ribosomal
protein S8, plastid - beechdrops plastid
gi|266980|sp|P30058|RR8_EPIVI Plastid 30S ribosomal
protein S8
Length = 134
Score = 189 bits (480), Expect = 1e-47
Identities = 97/134 (72%), Positives = 108/134 (80%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG+DTI +II SIRNAD RKR V+I TNITEN VKIL EGFIEN RKHRE +K +
Sbjct: 1 MGRDTILEIINSIRNADRGRKRVVRITSTNITENFVKILFIEGFIENARKHREKNKYYFT 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
LTLR+RRN+K Y LNLKRIS PGLRIY N Q+IP ILGG+GIVIL TSRGIMTDREA
Sbjct: 61 LTLRHRRNSKRPYINILNLKRISRPGLRIYSNSQQIPLILGGIGIVILYTSRGIMTDREA 120
Query: 121 RLEKIGGEVLCYIW 134
RL+ IGGE+LCYIW
Sbjct: 121 RLKGIGGELLCYIW 134
>gb|AAO74072.1| ribosomal protein S8 [Pinus koraiensis]
gi|29565645|ref|NP_817224.1| ribosomal protein S8 [Pinus
koraiensis]
Length = 132
Score = 179 bits (455), Expect = 1e-44
Identities = 89/134 (66%), Positives = 110/134 (81%), Gaps = 2/134 (1%)
Query: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60
MG DTIA++ITSIRNADM K TV++ TNIT+N +ILLREGFIE+VR+H+E KSFL+
Sbjct: 1 MGNDTIANLITSIRNADMVEKGTVRVTATNITKNIGRILLREGFIEDVREHQEGQKSFLI 60
Query: 61 LTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREA 120
T +YRR K +Y T KR S PGLRIY NY++IP++LGGMGIVILSTS+GI+TDREA
Sbjct: 61 STSKYRRRKKRTYMT--TSKRTSKPGLRIYSNYREIPKVLGGMGIVILSTSQGILTDREA 118
Query: 121 RLEKIGGEVLCYIW 134
R +KIGGE+LCY+W
Sbjct: 119 RQKKIGGEILCYVW 132
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.323 0.141 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 209,626,533
Number of Sequences: 2540612
Number of extensions: 7840698
Number of successful extensions: 16657
Number of sequences better than 10.0: 811
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 361
Number of HSP's that attempted gapping in prelim test: 15845
Number of HSP's gapped (non-prelim): 818
length of query: 134
length of database: 863,360,394
effective HSP length: 110
effective length of query: 24
effective length of database: 583,893,074
effective search space: 14013433776
effective search space used: 14013433776
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 67 (30.4 bits)
Description of BAB33231.1