BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33190.1 473 aa
(473 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB33190.1| PSII 43 KDa protein [Lotus corniculatus var. jap... 982 0.0
gb|AAB59336.1| 44 kd photosystem II protein [Pisum sativum] gi|1... 974 0.0
pir||F2NT44 photosystem II chlorophyll a-binding protein psbC pr... 974 0.0
emb|CAC88040.1| PSII 44kD protein [Atropa belladonna] gi|2826171... 973 0.0
dbj|BAA84381.1| PSII 43 KDa protein [Arabidopsis thaliana] gi|75... 971 0.0
ref|YP_086962.1| PSII 44 kDa protein [Panax ginseng] gi|51235309... 971 0.0
gb|AAR20882.1| photosystem II CP43 protein [Panax ginseng] 969 0.0
emb|CAD45103.1| PSII 43 KDa protein [Amborella trichopoda] gi|34... 967 0.0
emb|CAD28717.1| PSII 43 KDa protein [Calycanthus floridus var. g... 966 0.0
gb|AAD24583.1| chlorophyll a-binding protein PsbC [Populus delto... 964 0.0
emb|CAB88722.1| PSII 44kd protein [Spinacia oleracea] gi|1149752... 963 0.0
emb|CAF28589.1| PSII 43 KDa protein [Nymphaea alba] gi|50346778|... 962 0.0
ref|YP_054615.1| PSII 44kD protein [Saccharum officinarum] gi|49... 958 0.0
pir||T08998 photosystem II protein, 44K - spinach chloroplast 958 0.0
dbj|BAC85056.1| PSII 44 kD protein [Physcomitrella patens subsp.... 958 0.0
emb|CAA34014.1| PSII 43kDa protein [Oryza sativa (japonica culti... 954 0.0
dbj|BAC55438.1| photosystem II 44 kDa protein [Anthoceros formos... 952 0.0
ref|XP_465411.1| rice chloroplast PSII 43kDa protein [Oryza sati... 952 0.0
emb|CAB67143.1| PSII 44kD protein [Oenothera elata subsp. hooker... 952 0.0
prf||1603356H photosystem II 43kD protein 952 0.0
>dbj|BAB33190.1| PSII 43 KDa protein [Lotus corniculatus var. japonicus]
gi|13518432|ref|NP_084792.1| photosystem II 44 kDa
protein [Lotus corniculatus var. japonicus]
gi|23821996|sp|Q9BBT1|PSBC_LOTJA Photosystem II 44 kDa
reaction center protein (P6 protein) (CP43)
Length = 473
Score = 982 bits (2539), Expect = 0.0
Identities = 473/473 (100%), Positives = 473/473 (100%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>gb|AAB59336.1| 44 kd photosystem II protein [Pisum sativum]
gi|1346848|sp|P06004|PSBC_PEA Photosystem II 44 kDa
reaction center protein (P6 protein) (CP43)
Length = 473
Score = 974 bits (2517), Expect = 0.0
Identities = 467/473 (98%), Positives = 470/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIG+FLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGSFLLVFKAF 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITN TLSPSI+FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNFTLSPSILFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL AL+VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>pir||F2NT44 photosystem II chlorophyll a-binding protein psbC precursor -
common tobacco chloroplast
gi|131289|sp|P06413|PSBC_TOBAC Photosystem II 44 kDa
reaction center protein (P6 protein) (CP43)
gi|225285|prf||1211235W photosystem II 44kD protein
Length = 473
Score = 974 bits (2517), Expect = 0.0
Identities = 467/473 (98%), Positives = 469/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYHVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>emb|CAC88040.1| PSII 44kD protein [Atropa belladonna] gi|28261713|ref|NP_783228.1|
photosystem II 44 kDa protein [Atropa belladonna]
Length = 473
Score = 973 bits (2516), Expect = 0.0
Identities = 467/473 (98%), Positives = 469/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYHVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL AL+VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>dbj|BAA84381.1| PSII 43 KDa protein [Arabidopsis thaliana]
gi|7525029|ref|NP_051055.1| photosystem II 44 kDa
protein [Arabidopsis thaliana]
gi|6685793|sp|P56778|PSBC_ARATH Photosystem II 44 kDa
reaction center protein precursor (P6 protein) (CP43)
Length = 473
Score = 971 bits (2510), Expect = 0.0
Identities = 465/473 (98%), Positives = 469/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYHVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGVGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICI GGIWHILTKPFAWARRALVWSGEAYLSYSLAALSV GFIACCFVWFNNTAYPSE
Sbjct: 241 GSICIFGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVCGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL+TSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLSTSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>ref|YP_086962.1| PSII 44 kDa protein [Panax ginseng] gi|51235309|gb|AAT98505.1| PSII
44 kDa protein [Panax ginseng]
Length = 473
Score = 971 bits (2509), Expect = 0.0
Identities = 467/473 (98%), Positives = 468/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAG MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGGMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>gb|AAR20882.1| photosystem II CP43 protein [Panax ginseng]
Length = 473
Score = 969 bits (2504), Expect = 0.0
Identities = 466/473 (98%), Positives = 468/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAG MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGGMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGP+GLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPSGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>emb|CAD45103.1| PSII 43 KDa protein [Amborella trichopoda]
gi|34500910|ref|NP_904095.1| PSII 43 KDa protein
[Amborella trichopoda]
Length = 473
Score = 967 bits (2500), Expect = 0.0
Identities = 463/473 (97%), Positives = 467/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGVGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICILGGIWHILTKPFAWARRA VWSGEAYLSYSL ALS+FGFIACCFVWFNNTAYPSE
Sbjct: 241 GFICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSIFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>emb|CAD28717.1| PSII 43 KDa protein [Calycanthus floridus var. glaucus]
gi|32480839|ref|NP_862750.1| photosystem II 44 kDa
protein [Calycanthus floridus var. glaucus]
Length = 473
Score = 966 bits (2498), Expect = 0.0
Identities = 464/473 (98%), Positives = 466/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>gb|AAD24583.1| chlorophyll a-binding protein PsbC [Populus deltoides]
Length = 473
Score = 964 bits (2492), Expect = 0.0
Identities = 463/473 (97%), Positives = 466/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGW VSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWTVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL AL+VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRD EPVL MTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMTPLN 473
>emb|CAB88722.1| PSII 44kd protein [Spinacia oleracea] gi|11497521|ref|NP_054929.1|
photosystem II 44 kDa protein [Spinacia oleracea]
gi|2144937|pir||F2SP44 photosystem II chlorophyll
a-binding protein psbC precursor - spinach chloroplast
gi|343362|gb|AAA84631.1| 44 kD chlorophyll a apoprotein
gi|131286|sp|P06003|PSBC_SPIOL Photosystem II 44 kDa
reaction center protein precursor (P6 protein) (CP43)
Length = 473
Score = 963 bits (2490), Expect = 0.0
Identities = 463/473 (97%), Positives = 467/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTL L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLTLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITN+TLSPSIIFG LLKSPFGGEGWIVSVDDLEDIIGGHVW+
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNVTLSPSIIFGCLLKSPFGGEGWIVSVDDLEDIIGGHVWI 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GVICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL+TSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLSTSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>emb|CAF28589.1| PSII 43 KDa protein [Nymphaea alba] gi|50346778|ref|YP_053151.1|
PSII 43 KDa protein [Nymphaea alba]
Length = 473
Score = 962 bits (2487), Expect = 0.0
Identities = 460/473 (97%), Positives = 465/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVVDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVR+ITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRRITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGF ACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFTACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVL MTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473
>ref|YP_054615.1| PSII 44kD protein [Saccharum officinarum]
gi|49659496|dbj|BAD27277.1| PSII 44kD protein [Saccharum
officinarum]
Length = 473
Score = 958 bits (2477), Expect = 0.0
Identities = 457/473 (96%), Positives = 462/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSIC+LGGIWHILTKPFAWARRA VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICVLGGIWHILTKPFAWARRAFVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVL MTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMTPLN 473
>pir||T08998 photosystem II protein, 44K - spinach chloroplast
Length = 473
Score = 958 bits (2477), Expect = 0.0
Identities = 462/473 (97%), Positives = 466/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTL L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLTLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITN+TLSPSIIFG LLKSPFGGEGWIVSVDDLEDIIGGHVW+
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNVTLSPSIIFGCLLKSPFGGEGWIVSVDDLEDIIGGHVWI 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GVICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRS L+TSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSCLSTSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>dbj|BAC85056.1| PSII 44 kD protein [Physcomitrella patens subsp. patens]
gi|34501419|ref|NP_904206.1| photosystem II 44 kDa
protein [Physcomitrella patens subsp. patens]
Length = 473
Score = 958 bits (2476), Expect = 0.0
Identities = 456/473 (96%), Positives = 465/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYS RRFYHVETLFNGTLAL+GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSQRRFYHVETLFNGTLALSGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHAL+GPETLEESFPFFGYVWKD+NKMTTILGIHLILLG GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALIGPETLEESFPFFGYVWKDKNKMTTILGIHLILLGAGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVD+LEDIIGGHVWL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDNLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICI GGIWHILTKPFAWARRALVWSGEAYLSYSL A++VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICIFGGIWHILTKPFAWARRALVWSGEAYLSYSLGAIAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLS+LKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSKLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>emb|CAA34014.1| PSII 43kDa protein [Oryza sativa (japonica cultivar-group)]
gi|11466771|ref|NP_039367.1| photosystem II 44 kDa
protein [Oryza sativa (japonica cultivar-group)]
gi|50233955|ref|YP_052733.1| PSII 43kDa protein [Oryza
nivara] gi|42795543|gb|AAS46109.1| photosystem II 44 kDa
protein; psbC [Oryza sativa (japonica cultivar-group)]
gi|42795607|gb|AAS46172.1| photosystem II 44 kDa
protein; gpsbC [Oryza sativa (japonica cultivar-group)]
gi|42795477|gb|AAS46044.1| photosystem II 44 kDa
protein; psbC [Oryza sativa (indica cultivar-group)]
gi|131283|sp|P12158|PSBC_ORYSA Photosystem II 44 kDa
reaction center protein (P6 protein) (CP43)
gi|49614979|dbj|BAD26762.1| PSII 43kDa protein [Oryza
nivara]
Length = 473
Score = 954 bits (2466), Expect = 0.0
Identities = 456/473 (96%), Positives = 459/473 (96%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IC+ GGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GFICVFGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVL MTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMTPLN 473
>dbj|BAC55438.1| photosystem II 44 kDa protein [Anthoceros formosae]
gi|28202168|ref|NP_777409.1| photosystem II 44 kDa
protein [Anthoceros formosae]
gi|27807870|dbj|BAC55345.1| photosystem II 44 kDa
protein [Anthoceros formosae]
gi|48474394|sp|Q85AU0|PSBC_ANTFO Photosystem II 44 kDa
reaction center protein (P6 protein) (CP43)
Length = 473
Score = 952 bits (2462), Expect = 0.0
Identities = 453/473 (95%), Positives = 467/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRR+Y VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRYYPVETLFNGTLALGGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYH+L+GPETLEESFPFFGYVWKD+NKMTTILGIHL+LLG+GAFLLVFKAS
Sbjct: 121 SSAVLGFGGIYHSLIGPETLEESFPFFGYVWKDKNKMTTILGIHLVLLGLGAFLLVFKAS 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
+FGG+YDTWAPGGGDVR+ITNLTLSPSIIFGYLLKSPFGGEGWIVSVD+LEDIIGGHVWL
Sbjct: 181 FFGGVYDTWAPGGGDVREITNLTLSPSIIFGYLLKSPFGGEGWIVSVDNLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICILGGIWHILTKPFAWARRALVWSGEAYLSYSL A+SVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GLICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGAISVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLS+LK+DIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSKLKQDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDSEPVLSMTPLN 473
>ref|XP_465411.1| rice chloroplast PSII 43kDa protein [Oryza sativa (japonica
cultivar-group)] gi|46805114|dbj|BAD17353.1| rice
chloroplast PSII 43kDa protein [Oryza sativa (japonica
cultivar-group)]
Length = 473
Score = 952 bits (2461), Expect = 0.0
Identities = 455/473 (96%), Positives = 458/473 (96%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IC+ GGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GFICVFGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETM FWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMHFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVL MTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMTPLN 473
>emb|CAB67143.1| PSII 44kD protein [Oenothera elata subsp. hookeri]
gi|13518319|ref|NP_084678.1| photosystem II 44 kDa
protein [Oenothera elata subsp. hookeri]
Length = 473
Score = 952 bits (2460), Expect = 0.0
Identities = 459/473 (97%), Positives = 462/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPSI+FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSILFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GFHLYTWRIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEP LSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPALSMTPLN 473
>prf||1603356H photosystem II 43kD protein
Length = 472
Score = 952 bits (2460), Expect = 0.0
Identities = 455/472 (96%), Positives = 458/472 (96%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IC+ GGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GFICVFGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPL 472
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVL MTPL
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMTPL 472
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.143 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 913,927,213
Number of Sequences: 2540612
Number of extensions: 43336972
Number of successful extensions: 84603
Number of sequences better than 10.0: 682
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 82408
Number of HSP's gapped (non-prelim): 1090
length of query: 473
length of database: 863,360,394
effective HSP length: 132
effective length of query: 341
effective length of database: 527,999,610
effective search space: 180047867010
effective search space used: 180047867010
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 77 (34.3 bits)
Description of BAB33190.1