BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33185.1 126 aa
(126 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB33185.1| hypothetical protein [Lotus corniculatus var. ja... 264 4e-70
sp|Q9BBT4|YCF3_LOTJA Photosystem I assembly protein ycf3 264 4e-70
emb|CAB67135.1| Ycf3 protein [Oenothera elata subsp. hookeri] gi... 262 2e-69
sp|Q9MTP0|YCF3_OENHO Photosystem I assembly protein ycf3 262 2e-69
ref|YP_086967.1| ycf3 protein [Panax ginseng] gi|51235314|gb|AAT... 259 1e-68
gb|AAW33072.1| photosystem I assembly protein ycf3 [Plantago rug... 259 1e-68
emb|CAA77415.1| Ycf3 protein [Nicotiana tabacum] gi|11465956|ref... 259 1e-68
emb|CAC88045.1| ycf3 protein [Atropa belladonna] gi|28261718|ref... 259 1e-68
gb|AAW33066.1| photosystem I assembly protein ycf3 [Plantago lan... 258 2e-68
gb|AAW33070.1| photosystem I assembly protein ycf3 [Plantago rig... 258 3e-68
emb|CAJ00759.1| photosystem I assembly protein Ycf3 [Cucumis sat... 257 5e-68
emb|CAA44290.1| unnamed protein product [Zea mays] gi|2130140|pi... 256 9e-68
sp|P58257|YCF3_WHEAT Photosystem I assembly protein ycf3 256 9e-68
sp|P27324|YCF3_MAIZE Photosystem I assembly protein ycf3 (IRF170) 256 9e-68
emb|CAB88727.1| ycf3 protein [Spinacia oleracea] gi|11497526|ref... 255 1e-67
emb|CAA60287.1| hypothetical protein [Zea mays] gi|12430|emb|CAA... 254 4e-67
gb|AAB30283.2| IRF170 [Zea mays] 254 4e-67
ref|YP_052750.1| photosystem I assembly protein Ycf3 [Oryza niva... 254 4e-67
ref|NP_114260.1| photosystem I assembly protein Ycf3 [Triticum a... 254 4e-67
emb|CAF28594.1| ycf3 [Nymphaea alba] gi|50346783|ref|YP_053156.1... 253 1e-66
>dbj|BAB33185.1| hypothetical protein [Lotus corniculatus var. japonicus]
gi|13518427|ref|NP_084787.1| photosystem I assembly
protein ycf3 [Lotus corniculatus var. japonicus]
Length = 126
Score = 264 bits (674), Expect = 4e-70
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 121 ITRRFE 126
>sp|Q9BBT4|YCF3_LOTJA Photosystem I assembly protein ycf3
Length = 168
Score = 264 bits (674), Expect = 4e-70
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>emb|CAB67135.1| Ycf3 protein [Oenothera elata subsp. hookeri]
gi|13518311|ref|NP_084670.1| photosystem I assembly
protein Ycf3 [Oenothera elata subsp. hookeri]
Length = 158
Score = 262 bits (669), Expect = 2e-69
Identities = 123/126 (97%), Positives = 126/126 (99%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSY+LYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 33 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYVLYNIGLIHTSNGEHTKALEYYFRALERN 92
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 93 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 152
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 153 ITRRFE 158
>sp|Q9MTP0|YCF3_OENHO Photosystem I assembly protein ycf3
Length = 168
Score = 262 bits (669), Expect = 2e-69
Identities = 123/126 (97%), Positives = 126/126 (99%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSY+LYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYVLYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>ref|YP_086967.1| ycf3 protein [Panax ginseng] gi|51235314|gb|AAT98510.1| ycf3
protein [Panax ginseng]
Length = 168
Score = 259 bits (662), Expect = 1e-68
Identities = 122/126 (96%), Positives = 125/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAE+WFDQAAEYWKQA+ALTPGNYIEA NWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNYIEAHNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>gb|AAW33072.1| photosystem I assembly protein ycf3 [Plantago rugelii]
gi|57115531|gb|AAW33068.1| photosystem I assembly
protein ycf3 [Plantago media] gi|57115525|gb|AAW33064.1|
photosystem I assembly protein ycf3 [Plantago coronopus]
gi|57115522|gb|AAW33062.1| photosystem I assembly
protein ycf3 [Plantago australis]
Length = 168
Score = 259 bits (661), Expect = 1e-68
Identities = 121/126 (96%), Positives = 125/126 (99%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQA+R+GDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAVREGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>emb|CAA77415.1| Ycf3 protein [Nicotiana tabacum] gi|11465956|ref|NP_054498.1|
photosystem I assembly protein Ycf3 [Nicotiana tabacum]
gi|140285|sp|P12204|YCF3_TOBAC Photosystem I assembly
protein ycf3
Length = 168
Score = 259 bits (661), Expect = 1e-68
Identities = 122/126 (96%), Positives = 125/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI+QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>emb|CAC88045.1| ycf3 protein [Atropa belladonna] gi|28261718|ref|NP_783233.1|
photosystem I assembly protein ycf3 [Atropa belladonna]
gi|39932533|sp|Q8S8X3|YCF3_ATRBE Photosystem I assembly
protein ycf3
Length = 168
Score = 259 bits (661), Expect = 1e-68
Identities = 122/126 (96%), Positives = 125/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI+QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>gb|AAW33066.1| photosystem I assembly protein ycf3 [Plantago lanceolata]
Length = 168
Score = 258 bits (659), Expect = 2e-68
Identities = 121/126 (96%), Positives = 125/126 (99%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEMDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQA+R+GDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAVREGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>gb|AAW33070.1| photosystem I assembly protein ycf3 [Plantago rigida]
Length = 168
Score = 258 bits (658), Expect = 3e-68
Identities = 120/126 (95%), Positives = 125/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQA+R+GDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAVREGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLK 162
Query: 121 ITRRFE 126
ITRRF+
Sbjct: 163 ITRRFD 168
>emb|CAJ00759.1| photosystem I assembly protein Ycf3 [Cucumis sativus]
Length = 169
Score = 257 bits (656), Expect = 5e-68
Identities = 121/126 (96%), Positives = 125/126 (99%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHT NGEHTKALEYYFRALERN
Sbjct: 44 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTRNGEHTKALEYYFRALERN 103
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAE+WF+QAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 104 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFNQAAEYWKQAIALTPGNYIEAQNWLK 163
Query: 121 ITRRFE 126
ITRRF+
Sbjct: 164 ITRRFK 169
>emb|CAA44290.1| unnamed protein product [Zea mays] gi|2130140|pir||S60189
hypothetical protein 170 - maize
Length = 170
Score = 256 bits (654), Expect = 9e-68
Identities = 121/126 (96%), Positives = 124/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>sp|P58257|YCF3_WHEAT Photosystem I assembly protein ycf3
Length = 170
Score = 256 bits (654), Expect = 9e-68
Identities = 121/126 (96%), Positives = 124/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>sp|P27324|YCF3_MAIZE Photosystem I assembly protein ycf3 (IRF170)
Length = 170
Score = 256 bits (654), Expect = 9e-68
Identities = 121/126 (96%), Positives = 124/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>emb|CAB88727.1| ycf3 protein [Spinacia oleracea] gi|11497526|ref|NP_054934.1|
photosystem I assembly protein Ycf3 [Spinacia oleracea]
gi|18203267|sp|Q9M3M5|YCF3_SPIOL Photosystem I assembly
protein ycf3
Length = 165
Score = 255 bits (652), Expect = 1e-67
Identities = 120/126 (95%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 40 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 99
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAE+WFDQAAEYWKQA+ LTPGNYIEA NWLK
Sbjct: 100 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQAAEYWKQALTLTPGNYIEAHNWLK 159
Query: 121 ITRRFE 126
IT RFE
Sbjct: 160 ITGRFE 165
>emb|CAA60287.1| hypothetical protein [Zea mays] gi|12430|emb|CAA41108.1| ORF170
[Zea mays] gi|50812529|ref|YP_054632.1| intron
containing RF(IRF168) [Saccharum officinarum]
gi|11467193|ref|NP_043026.1| photosystem I assembly
protein Ycf3 [Zea mays] gi|1363543|pir||S58553
hypothetical protein 170 - maize chloroplast
gi|49659513|dbj|BAD27294.1| intron containing RF(IRF168)
[Saccharum officinarum]
Length = 170
Score = 254 bits (648), Expect = 4e-67
Identities = 120/126 (95%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEA RLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>gb|AAB30283.2| IRF170 [Zea mays]
Length = 170
Score = 254 bits (648), Expect = 4e-67
Identities = 120/126 (95%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWL
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLX 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>ref|YP_052750.1| photosystem I assembly protein Ycf3 [Oryza nivara]
gi|49614996|dbj|BAD26779.1| photosystem I assembly
protein Ycf3 [Oryza nivara]
Length = 170
Score = 254 bits (648), Expect = 4e-67
Identities = 120/126 (95%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEA RLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>ref|NP_114260.1| photosystem I assembly protein Ycf3 [Triticum aestivum]
gi|13928206|dbj|BAB47035.1| ycf3 [Triticum aestivum]
Length = 170
Score = 254 bits (648), Expect = 4e-67
Identities = 120/126 (95%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEA RLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>emb|CAF28594.1| ycf3 [Nymphaea alba] gi|50346783|ref|YP_053156.1| ycf3 [Nymphaea
alba]
Length = 168
Score = 253 bits (645), Expect = 1e-66
Identities = 120/126 (95%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMR E+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRPEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQA NNMAVICHYRGE+AIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQASNNMAVICHYRGEEAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT RFE
Sbjct: 163 ITGRFE 168
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.133 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,978,349
Number of Sequences: 2540612
Number of extensions: 8458670
Number of successful extensions: 23735
Number of sequences better than 10.0: 864
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 584
Number of HSP's that attempted gapping in prelim test: 22041
Number of HSP's gapped (non-prelim): 2158
length of query: 126
length of database: 863,360,394
effective HSP length: 102
effective length of query: 24
effective length of database: 604,217,970
effective search space: 14501231280
effective search space used: 14501231280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Description of BAB33185.1