BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33177.1 508 aa
(508 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
matK -chloroplast genome- 611 e-175
At1g03310 putative isoamylase 33 0.37
At1g74350 putative type II intron maturase 32 0.63
At4g13750 hypothetical protein 30 3.1
At4g34450 Nonclathrin coat protein gamma - like protein 30 4.1
At2g38760 putative annexin 30 4.1
At1g79860 unknown protein 30 4.1
At5g49610 unknown protein 29 5.4
At5g22510 alkaline/neutral invertase 29 5.4
At3g11970 hypothetical protein 29 7.0
At1g55830 hypothetical protein 29 7.0
At1g36590 hypothetical protein 29 7.0
At2g28050 putative salt-inducible protein 28 9.1
>matK -chloroplast genome-
Length = 526
Score = 611 bits (1575), Expect = e-175
Identities = 313/513 (61%), Positives = 376/513 (73%), Gaps = 14/513 (2%)
Query: 1 MEEYQLYLELDRSRQQDFLYPLVFHEYIYGLAYSHDLNRS-----IFVENFGYDNKYSLL 55
M+++Q YLE D +RQQ FLYPL F EYIY LAY H LNR IF+EN YD KYS L
Sbjct: 23 MDKFQGYLEFDGARQQSFLYPLFFREYIYVLAYDHGLNRLNRNRYIFLENADYDKKYSSL 82
Query: 56 IVKRLITRMYQQNHLIISANDSNKNRFLRYNKNFYSQIISEGFAIIVEILFSLQLSSSLE 115
I KRLI RMY+QN LII D N+N FL + FY Q+IS FA+IVEI FSL+L SS +
Sbjct: 83 ITKRLILRMYEQNRLIIPTKDVNQNSFLGHTSLFYYQMISVLFAVIVEIPFSLRLGSSFQ 142
Query: 116 EAEIIKSYKNLRSIHSIFPFFEDKVTYLNYISDIRVPYPIHLEILVQILRYWVKDAPLFH 175
++ KSY NL+SIHSIFPF EDK+ + NY+ D+ +PYPIHLEILVQ LRY VKDA H
Sbjct: 143 GKQLKKSY-NLQSIHSIFPFLEDKLGHFNYVLDVLIPYPIHLEILVQTLRYRVKDASSLH 201
Query: 176 LLRLFLYDYCNWNSIFIPQKSIYTFSKKNPRFFFFLYNFYVCEYESIFFFLRTKSFHLRL 235
R LY+YCNW + +I +KSI NPRFF FLYN +VCEYESIFFFLR +S HLR
Sbjct: 202 FFRFCLYEYCNWKNFYIKKKSIL-----NPRFFLFLYNSHVCEYESIFFFLRKRSSHLRS 256
Query: 236 KSFRVFFERIFFYAKKGHLVEVFVKDFFSTLTFFKDPFIHYVRYQGKSILASKNLPILMN 295
S+ V FERI FY K H +VFV +F + L KDPFIHYVRY G+ ILA+K+ P+LMN
Sbjct: 257 TSYEVLFERIVFYGKIHHFFKVFVNNFPAILGLLKDPFIHYVRYHGRCILATKDTPLLMN 316
Query: 296 KWKYYFIHLWQCYFDVWSQPRTIRINQLSEYSFHFLGYFLKVGLKHSVVRGQMLQNGFLI 355
KWKYYF++LWQCYF VW Q + + INQLS+ + FLGY + L VVR QML+N FLI
Sbjct: 317 KWKYYFVNLWQCYFSVWFQSQKVNINQLSKDNLEFLGYLSSLRLNPLVVRSQMLENSFLI 376
Query: 356 KIIIKKLDIIVPIIPIIRLLAKSKFCNVLGNPLSKPSWADLSDFEIIARFLRICRNLSHY 415
+ KLD +PI II LAK KFCNVLG+P+SK +W D SD +I+ RF+RICRN+SHY
Sbjct: 377 DNVRIKLDSKIPISSIIGSLAKDKFCNVLGHPISKATWTDSSDSDILNRFVRICRNISHY 436
Query: 416 YNGSSKKKSLYRIKYILRLSCIKTLACKHKSTVRAFSKRLGSEELLEEFFTEEEEILSLI 475
Y+GSSKKK+LYRIKYILRL C+KTLA KHKSTVR F KRLGS LLEEF T E+++LSLI
Sbjct: 437 YSGSSKKKNLYRIKYILRLCCVKTLARKHKSTVRTFLKRLGS-GLLEEFLTGEDQVLSLI 495
Query: 476 FPTTSSTLRRLHRNRIWYLDILFSNDNDLINHD 508
FP + +RL+R RIWYLDIL+ NDL+NH+
Sbjct: 496 FPRSYYASKRLYRVRIWYLDILYL--NDLVNHE 526
>At1g03310 putative isoamylase
Length = 882
Score = 33.1 bits (74), Expect = 0.37
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 87 KNFYSQIISEGFAIIVEILFSLQLSSSLEEAEIIKSYKNLRSIHSIFPFFEDKVTYLNYI 146
K ++ SEG +++E++F+ S LR I +++ + L+
Sbjct: 449 KVMVKKLHSEGIEVLLEVVFTHTADSGA-----------LRGIDDSSYYYKGRANDLDSK 497
Query: 147 SDIRVPYPIHLEILVQILRYWVKDAPLFHL 176
S + YP+ +++++ LRYWV + FH+
Sbjct: 498 SYLNCNYPVVQQLVLESLRYWVTE---FHV 524
>At1g74350 putative type II intron maturase
Length = 753
Score = 32.3 bits (72), Expect = 0.63
Identities = 27/97 (27%), Positives = 40/97 (40%), Gaps = 1/97 (1%)
Query: 363 DIIVPIIPIIRLLAKSKFCNVLGNPLSKPSWADLSDFEIIARFLRICRNLSHYYNGSSKK 422
D++ P I R L + G S L +II + + R +Y G S
Sbjct: 532 DVVAPTNAIGRRLYRYGLITAKGYARSNSMLILLDTAQIIDWYSGLVRRWVIWYEGCSNF 591
Query: 423 KSLYR-IKYILRLSCIKTLACKHKSTVRAFSKRLGSE 458
+ I +R+SCI+TLA K++ KRL E
Sbjct: 592 DEIKALIDNQIRMSCIRTLAAKYRIHENEIEKRLDLE 628
>At4g13750 hypothetical protein
Length = 2137
Score = 30.0 bits (66), Expect = 3.1
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 51 KYSLLIVKRLITRMYQQNHLIISANDSNKNRFLRYNKNFYSQIISEGFAIIVEILFSLQL 110
KY L ++ RL Y + +S + +R +++ + ++I + I+ + L L
Sbjct: 1356 KYLLEVLDRLWDDCYYDKTTV--NYNSGTHGIIRSSESSFMRVICDSLWIVSSMDSKLHL 1413
Query: 111 SSSLEEAEIIKSYKNLRSIHSIF----PFFEDKVTYLNYISDIRVPYPIHLEILVQILRY 166
S L Y + + SI P+ VT + +SDI + L+ +++L
Sbjct: 1414 SKDL--------YHDCDDVQSILGMNAPYAVPTVTSVKLLSDIGFKTKVSLDDALEVLES 1465
Query: 167 WV 168
WV
Sbjct: 1466 WV 1467
>At4g34450 Nonclathrin coat protein gamma - like protein
Length = 831
Score = 29.6 bits (65), Expect = 4.1
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 70 LIISANDSNKNRFLRYNKNFYSQIISEGFAIIVEILFSLQLSSSLEEAEIIKSYKNLRSI 129
L+ + N+S+ R ++ NF S I E ++V+ + SL + L+ ++ N+
Sbjct: 336 LLKTGNESSVERLMKQITNFMSDIADEFKIVVVDAIRSLCVKFPLKYRSLMTFLSNILRE 395
Query: 130 HSIFPF----FEDKVTYLNYISDIRVPYPIHLEILVQILRYWVKDAPLFHLL 177
F + + VT + I D + +HL ++ + + H L
Sbjct: 396 EGGFEYKRAIVDSIVTIIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFL 447
>At2g38760 putative annexin
Length = 321
Score = 29.6 bits (65), Expect = 4.1
Identities = 24/78 (30%), Positives = 34/78 (42%), Gaps = 2/78 (2%)
Query: 407 RICRNLSHYYNGSSKKKSLYRIKYILRLSCIKTLACKHKSTVRAFSKRLGSEELLEEFFT 466
R R ++ N KKKSL +K I+ +SC T + H VR L L E +
Sbjct: 87 RDARLVNKILNKEKKKKSLENLKVIVEISC--TTSPNHLIAVRKAYCSLFDSSLEEHIAS 144
Query: 467 EEEEILSLIFPTTSSTLR 484
L+ + T +ST R
Sbjct: 145 SLPFPLAKLLVTLASTFR 162
>At1g79860 unknown protein
Length = 515
Score = 29.6 bits (65), Expect = 4.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 81 RFLRYNKNFYSQIISEGFAIIVEILFSLQLSSS 113
RFL+Y K+ +Q++ AI ++LF +++ S
Sbjct: 256 RFLQYQKDCVNQVLKAAMAINAQVLFEMEIPES 288
>At5g49610 unknown protein
Length = 359
Score = 29.3 bits (64), Expect = 5.4
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 295 NKWKYYFIHLWQCYFDVWSQPRTIRINQLSEYSFHFLGYFLKVGLKHSVVR 345
NKW+ + L +C F S+ + + +N + + L Y L + ++H V R
Sbjct: 184 NKWRKFVSVLEECSFTHMSKNQVVFVNGMLHWLMSGLCYILALDVEHDVWR 234
>At5g22510 alkaline/neutral invertase
Length = 617
Score = 29.3 bits (64), Expect = 5.4
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 72 ISANDSNKNRFLRYNKNFYSQIISEGFAIIVE---------ILFSLQLSS 112
I+AND N L Y++ F I G A +++ IL++LQL S
Sbjct: 154 IAANDPNSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQLQS 203
>At3g11970 hypothetical protein
Length = 1499
Score = 28.9 bits (63), Expect = 7.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 447 TVRAFSKRLGSEELLEEFFTEEEEILSLIFPTTSSTLRRLHRNRIWYLD 495
T+ A + LG E ++EE E +I I PT R H ++I L+
Sbjct: 551 TINALTSELGEESVVEEVLNEYPDI--FIEPTALPPFREKHNHKIKLLE 597
>At1g55830 hypothetical protein
Length = 509
Score = 28.9 bits (63), Expect = 7.0
Identities = 17/64 (26%), Positives = 32/64 (49%), Gaps = 4/64 (6%)
Query: 77 SNKNRFLRYNKNFYSQIISEGFAIIVEILFSLQLSSSLEEAEIIKSYKNLRSIHSIFPFF 136
S + R L+ KN + + +A++ E++ ++ + + YK L SIHSIF
Sbjct: 404 SGETRELQLEKNSIQERLHRSYAVVDEMV----TREVKKDPAVRQVYKLLTSIHSIFEQI 459
Query: 137 EDKV 140
+K+
Sbjct: 460 SEKI 463
>At1g36590 hypothetical protein
Length = 1499
Score = 28.9 bits (63), Expect = 7.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 447 TVRAFSKRLGSEELLEEFFTEEEEILSLIFPTTSSTLRRLHRNRIWYLD 495
T+ A + LG E ++EE E +I I PT R H ++I L+
Sbjct: 551 TINALTSELGEESVVEEVLNEYPDI--FIEPTALPPFREKHNHKIKLLE 597
>At2g28050 putative salt-inducible protein
Length = 462
Score = 28.5 bits (62), Expect = 9.1
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 211 LYNFYVCEYESIFFFLRTKSFHLRLKSFRVFFERIFFYAKK 251
L+NF + E S+F F HL L +FRV ER F YAK+
Sbjct: 67 LFNF-ILENPSLFSFQPDLRTHLSL-TFRVLSERRFSYAKE 105
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.330 0.145 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,685,265
Number of Sequences: 26719
Number of extensions: 515363
Number of successful extensions: 1403
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1396
Number of HSP's gapped (non-prelim): 13
length of query: 508
length of database: 11,318,596
effective HSP length: 104
effective length of query: 404
effective length of database: 8,539,820
effective search space: 3450087280
effective search space used: 3450087280
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Description of BAB33177.1