TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BAB33240.1	155 aa
         (155 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC76752 homologue to SP|O65731|RS5_CICAR 40S ribosomal protein S...    63  5e-11
TC76751 similar to GP|15294021|gb|AAK95187.1 40S ribosomal prote...    63  5e-11
TC76753 SP|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment)....    59  1e-09
TC91983 weakly similar to GP|18376255|emb|CAD21369. probable GEL...    30  0.39
TC88117 weakly similar to PIR|E96803|E96803 probable lipase  416...    25  9.6

>TC76752 homologue to SP|O65731|RS5_CICAR 40S ribosomal protein S5
           (Fragment). [Chickpea  Garbanzo] {Cicer arietinum},
           partial (97%)
          Length = 943

 Score = 62.8 bits (151), Expect = 5e-11
 Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
 Frame = +2

Query: 7   AEKKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAI 66
           ++K+  K+      RL N L+     +GKK +A +II  AM+ I   T+ NP+ V+  A+
Sbjct: 266 SKKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAV 445

Query: 67  RGVTPDIAVKARRVG--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLS 121
               P     A R+G  G   +  ++I   +    AI  L   +R+   RN   +A  L+
Sbjct: 446 VNSGP--REDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA 619

Query: 122 SELVDAAKGSGD--AIRKKEETHRMAEANR 149
            EL++AAKGS +  AI+KK+E  R+A+ANR
Sbjct: 620 DELINAAKGSSNSYAIKKKDEIERVAKANR 709


>TC76751 similar to GP|15294021|gb|AAK95187.1 40S ribosomal protein S5
           {Ictalurus punctatus}, partial (93%)
          Length = 910

 Score = 62.8 bits (151), Expect = 5e-11
 Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
 Frame = +1

Query: 7   AEKKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAI 66
           ++K+  K+      RL N L+     +GKK +A +II  AM+ I   T+ NP+ V+  A+
Sbjct: 250 SKKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAV 429

Query: 67  RGVTPDIAVKARRVG--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLS 121
               P     A R+G  G   +  ++I   +    AI  L   +R+   RN   +A  L+
Sbjct: 430 VNSGP--REDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLA 603

Query: 122 SELVDAAKGSGD--AIRKKEETHRMAEANR 149
            EL++AAKGS +  AI+KK+E  R+A+ANR
Sbjct: 604 DELINAAKGSSNSYAIKKKDEIERVAKANR 693


>TC76753 SP|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment). [Chickpea 
           Garbanzo] {Cicer arietinum}, partial (66%)
          Length = 1221

 Score = 58.5 bits (140), Expect = 1e-09
 Identities = 47/133 (35%), Positives = 72/133 (53%), Gaps = 7/133 (5%)
 Frame = +3

Query: 24  NMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVG-- 81
           N L+     +GKK +A +II  AM+ I   T+ NP+ V+  A+    P     A R+G  
Sbjct: 666 NSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGP--REDATRIGSA 839

Query: 82  GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD--AIR 136
           G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  AI+
Sbjct: 840 GVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIK 1019

Query: 137 KKEETHRMAEANR 149
           KK+E  R+A+ANR
Sbjct: 1020KKDEIERVAKANR 1058


>TC91983 weakly similar to GP|18376255|emb|CAD21369. probable GEL1 protein
           {Neurospora crassa}, partial (38%)
          Length = 973

 Score = 30.0 bits (66), Expect = 0.39
 Identities = 18/68 (26%), Positives = 30/68 (43%), Gaps = 3/68 (4%)
 Frame = -1

Query: 68  GVTPDIAVKARRVGGSTHQVPIEIGS---TQGKALAIRWLLGASRKRPGRNMAFKLSSEL 124
           GVTP + V+ + V        +E+GS   T G  ++ R       K  GR++ F ++ + 
Sbjct: 316 GVTPGVVVEGKEVAAGIIATTVEVGSSLHTVGSNVSSRVTNWHVTKAAGRHVVFDVTGDS 137

Query: 125 VDAAKGSG 132
            D     G
Sbjct: 136 FDVGSRQG 113


>TC88117 weakly similar to PIR|E96803|E96803 probable lipase  4162-5963
           [imported] - Arabidopsis thaliana, partial (35%)
          Length = 775

 Score = 25.4 bits (54), Expect = 9.6
 Identities = 12/31 (38%), Positives = 18/31 (57%)
 Frame = -1

Query: 81  GGSTHQVPIEIGSTQGKALAIRWLLGASRKR 111
           GG+T    + IG+T   ++ I WLL  + KR
Sbjct: 157 GGNTSSAILHIGATSITSIPIIWLLQINFKR 65


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.131    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,269,878
Number of Sequences: 36976
Number of extensions: 29351
Number of successful extensions: 125
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of query: 155
length of database: 9,014,727
effective HSP length: 88
effective length of query: 67
effective length of database: 5,760,839
effective search space: 385976213
effective search space used: 385976213
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)