TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BAB33183.1	158 aa
         (158 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AJ499854 homologue to SP|Q9MTP3|NUGC_ NADH-plastoquinone oxidore...   174  1e-44
BG644746 SP|P12201|NUGC NADH-plastoquinone oxidoreductase subuni...   131  1e-31
TC86883 weakly similar to GP|16974631|gb|AAL31218.1 At2g38180/F1...    29  0.70
CB894821 similar to GP|4884835|gb|A aminohydroxybenzoic acid syn...    27  2.6
TC80630 similar to GP|22655010|gb|AAM98096.1 AT3g13690/MMM17_12 ...    27  4.5
TC78609 similar to GP|21105746|gb|AAM34772.1 nam-like protein 9 ...    27  4.5
AW774261 weakly similar to EGAD|146423|156 vitellogenin {Anolis ...    27  4.5
TC79265 similar to PIR|B96840|B96840 hypothetical protein F23A5....    26  7.7
TC88355 similar to GP|21554234|gb|AAM63309.1 sulfate adenylyltra...    26  7.7
TC80665 weakly similar to GP|19310633|gb|AAL85047.1 unknown prot...    26  7.7
TC80751 weakly similar to GP|13161403|dbj|BAB33036. CPRD49 {Vign...    26  7.7
TC85782 homologue to GP|21553758|gb|AAM62851.1 ribosomal protein...    26  7.7

>AJ499854 homologue to SP|Q9MTP3|NUGC_ NADH-plastoquinone oxidoreductase
           subunit J (EC 1.6.5.3). [Hooker's evening primrose],
           partial (55%)
          Length = 553

 Score =  174 bits (441), Expect = 1e-44
 Identities = 81/89 (91%), Positives = 83/89 (93%), Gaps = 1/89 (1%)
 Frame = -3

Query: 71  LTRIECGIYQPEEVCIKIFVPRNNPRIPSIF-WVWKSADFQERESYDMLGISYDNHPRLK 129
           LTRIE  + QPEEVCIK+FVPR NPRIPSIF WVWKSADFQERESYDMLGISYDNHPRLK
Sbjct: 542 LTRIEYSLDQPEEVCIKVFVPRQNPRIPSIFFWVWKSADFQERESYDMLGISYDNHPRLK 363

Query: 130 RILMPESWIGWPLRKDYITPNFYEIQDAH 158
           RILMPESWIGWPLRKDYI PNFYEIQDAH
Sbjct: 362 RILMPESWIGWPLRKDYIAPNFYEIQDAH 276


>BG644746 SP|P12201|NUGC NADH-plastoquinone oxidoreductase subunit J (EC
           1.6.5.3) (ORF 158). [Common tobacco], partial (37%)
          Length = 294

 Score =  131 bits (330), Expect = 1e-31
 Identities = 57/60 (95%), Positives = 58/60 (96%)
 Frame = +3

Query: 99  SIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQDAH 158
           S+FWVWKS DFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYI PNFYEIQDAH
Sbjct: 3   SVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 182


>TC86883 weakly similar to GP|16974631|gb|AAL31218.1 At2g38180/F16M14.11
           {Arabidopsis thaliana}, partial (66%)
          Length = 1154

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 16/53 (30%), Positives = 25/53 (46%)
 Frame = +2

Query: 98  PSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYITPN 150
           PS++W    A+F E   YDM+ +    +     +  P+  + WP    YI PN
Sbjct: 809 PSLYWKLMPAEFGEDSPYDMVSLDGKININFSDVPFPDG-VEWP---*YIIPN 955


>CB894821 similar to GP|4884835|gb|A aminohydroxybenzoic acid synthase
           {Streptomyces collinus}, partial (4%)
          Length = 708

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -2

Query: 54  QCAYDVSPGGLLASVYHLTRIECGIYQPEEVCIKIFVPRNNPRIPSIFW 102
           +C   VSP G ++  + L R+  G+Y      I++F     P   S+ W
Sbjct: 293 RCCAFVSPAGCVSMWWLLARVAAGVYLSTSPMIRLF-----PAAYSLLW 162


>TC80630 similar to GP|22655010|gb|AAM98096.1 AT3g13690/MMM17_12
          {Arabidopsis thaliana}, partial (18%)
          Length = 1044

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (57%)
 Frame = +2

Query: 53 SQCAYDVSPGGLLASVYHLTRIECGIYQPEE 83
          SQC+ D +  GL +S Y L +   G + PE+
Sbjct: 32 SQCSTDAATSGLGSSQYVLQKCHVGDFVPEQ 124


>TC78609 similar to GP|21105746|gb|AAM34772.1 nam-like protein 9 {Petunia x
            hybrida}, partial (39%)
          Length = 1931

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 137  WIGWPLRKDYITP 149
            WIGWP R + +TP
Sbjct: 1514 WIGWPARMEVLTP 1552


>AW774261 weakly similar to EGAD|146423|156 vitellogenin {Anolis pulchellus},
           partial (40%)
          Length = 495

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 20  GFDYQGIETLQIKP-EDWHSIAVILYVY 46
           G + Q  E LQ  P + WHSIA + Y+Y
Sbjct: 133 GLELQMQENLQHHPPQSWHSIAFLPYLY 50


>TC79265 similar to PIR|B96840|B96840 hypothetical protein F23A5.11
           [imported] - Arabidopsis thaliana, partial (16%)
          Length = 612

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = -1

Query: 42  ILYVYGYNYLRSQCAYDVSPGGLLASVYH---LTRIECGIYQPEEVCI 86
           ++YVY      + CAY  S GG+ A + H   +T     IY   ++ I
Sbjct: 558 LIYVYQSGVFITMCAYAAS*GGINAVLTHSFLITNYNVFIYYHTKILI 415


>TC88355 similar to GP|21554234|gb|AAM63309.1 sulfate adenylyltransferase
           {Arabidopsis thaliana}, partial (56%)
          Length = 1029

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 14/37 (37%), Positives = 20/37 (53%)
 Frame = +3

Query: 1   MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWH 37
           M+ R  AWL    LV RSL F + G + + ++   WH
Sbjct: 531 MEKRCLAWL----LVSRSLTFCHSGWQLMTLR*TRWH 629


>TC80665 weakly similar to GP|19310633|gb|AAL85047.1 unknown protein
           {Arabidopsis thaliana}, partial (31%)
          Length = 894

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 10/28 (35%), Positives = 15/28 (52%)
 Frame = -2

Query: 49  NYLRSQCAYDVSPGGLLASVYHLTRIEC 76
           NYL  +C YD  P  L A++ + +   C
Sbjct: 392 NYLNEECTYDPQPQSLPANMQYKS*YNC 309


>TC80751 weakly similar to GP|13161403|dbj|BAB33036. CPRD49 {Vigna
           unguiculata}, partial (52%)
          Length = 1156

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = +1

Query: 98  PSIFWVWKSADFQERESYDML-----GISYDNHPRLKRILMPESWIGWP 141
           PS++W    A+F E   YDM+      I++ N P       PE  + WP
Sbjct: 532 PSLYWKLMPAEFGEDSPYDMVTLDGKTINFSNVP------FPED-VDWP 657


>TC85782 homologue to GP|21553758|gb|AAM62851.1 ribosomal protein S15-like
           {Arabidopsis thaliana}, complete
          Length = 831

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 36  WHSIAVILYVYGYNYLRSQCAYDVSPGGLLASVYHLTRIECGIY 79
           WHS+   L+   +N +R  C+   S   LLA+  HL+R+  G +
Sbjct: 139 WHSLCCYLW---FN-IRHDCSETCSIWFLLAAASHLSRMLLGFF 20


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.324    0.143    0.474 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,493,386
Number of Sequences: 36976
Number of extensions: 102447
Number of successful extensions: 409
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of query: 158
length of database: 9,014,727
effective HSP length: 88
effective length of query: 70
effective length of database: 5,760,839
effective search space: 403258730
effective search space used: 403258730
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.4 bits)