BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33244.1 323 aa
(323 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP459570 hypothetical protein [Lotus japonicus] 654 0.0
BP033723 37 0.005
TC15401 UP|CAE45587 (CAE45587) Vacuolar proton-ATPase subunit-li... 30 0.42
TC15402 UP|CAE45587 (CAE45587) Vacuolar proton-ATPase subunit-li... 30 0.55
BP065241 29 1.2
TC15450 similar to GB|AAD04752.1|4098989|ATU81498 phenylalkylami... 28 2.7
AV767030 27 3.6
TC17927 UP|Q8GRY7 (Q8GRY7) bZIP with a Ring-finger motif, complete 27 4.7
TC10486 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomera... 27 6.1
AV778891 27 6.1
AV765523 27 6.1
TC8423 similar to UP|AAQ62572 (AAQ62572) Glycosyltransferase 10,... 27 6.1
TC14154 similar to UP|P93333 (P93333) PR10-1 protein (Class 10 P... 26 8.0
AW719889 26 8.0
TC12452 26 8.0
>NP459570 hypothetical protein [Lotus japonicus]
Length = 972
Score = 654 bits (1688), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Frame = +1
Query: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 60
MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW
Sbjct: 1 MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRW 180
Query: 61 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 120
FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE
Sbjct: 181 FFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTE 360
Query: 121 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 180
MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF
Sbjct: 361 MHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSF 540
Query: 181 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 240
LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG
Sbjct: 541 LYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIG 720
Query: 241 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 300
ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII
Sbjct: 721 ILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLII 900
Query: 301 WICYFGVNLLGIGLHNYGSFTSN 323
WICYFGVNLLGIGLHNYGSFTSN
Sbjct: 901 WICYFGVNLLGIGLHNYGSFTSN 969
>BP033723
Length = 489
Score = 37.0 bits (84), Expect = 0.005
Identities = 27/90 (30%), Positives = 41/90 (45%)
Frame = -2
Query: 232 LGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSI 291
+G F +++G WG++W WD + T FI+ F IYL + + +KL + I
Sbjct: 380 MGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFIS---FLIYLGALRFQKLPVEPAPI 210
Query: 292 VASIGFLIIWICYFGVNLLGIGLHNYGSFT 321
G + I I VN LH GS +
Sbjct: 209 SIRAGPIDIPIIKSSVNWWNT-LHQPGSIS 123
>TC15401 UP|CAE45587 (CAE45587) Vacuolar proton-ATPase subunit-like protein,
partial (86%)
Length = 2417
Score = 30.4 bits (67), Expect = 0.42
Identities = 26/110 (23%), Positives = 49/110 (43%), Gaps = 2/110 (1%)
Frame = +1
Query: 29 LFVNQIVGFYDSSKKGMIITFLCITGLLITRWFFS-GHLPFSDL-YESLIFLSWGFSIFY 86
+FV+Q++ + ++ + T + W S H S + YE ++ L+WG+
Sbjct: 1750 IFVHQLIHTIE-----FVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGY---- 1902
Query: 87 MVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTEMHQSVILVPALQSHWL 136
N++ +I ++F FAT G+L M + AL+ HW+
Sbjct: 1903 ---------NNVIILIVGILVFI--FATVGVLLVMETLSAFLHALRLHWV 2019
>TC15402 UP|CAE45587 (CAE45587) Vacuolar proton-ATPase subunit-like protein,
complete
Length = 2423
Score = 30.0 bits (66), Expect = 0.55
Identities = 26/110 (23%), Positives = 49/110 (43%), Gaps = 2/110 (1%)
Frame = +1
Query: 29 LFVNQIVGFYDSSKKGMIITFLCITGLLITRWFFS-GHLPFSDL-YESLIFLSWGFSIFY 86
+FV+Q++ + ++ + T + W S H S + YE ++ L+WG+
Sbjct: 2086 IFVHQLIHTIE-----FVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGYY--- 2241
Query: 87 MVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTEMHQSVILVPALQSHWL 136
N++ +I ++F FAT G+L M + AL+ HW+
Sbjct: 2242 ---------NNVIILIVGILVFI--FATVGVLLVMETLSAFLHALRLHWV 2358
>BP065241
Length = 563
Score = 28.9 bits (63), Expect = 1.2
Identities = 11/29 (37%), Positives = 17/29 (57%)
Frame = -1
Query: 51 CITGLLITRWFFSGHLPFSDLYESLIFLS 79
C+T L I+ WFFS H F ++ + +S
Sbjct: 362 CLTALAISSWFFSSHFFFLSFFKREVNVS 276
>TC15450 similar to GB|AAD04752.1|4098989|ATU81498 phenylalkylamine binding
protein homolog {Arabidopsis thaliana;} , partial (70%)
Length = 1088
Score = 27.7 bits (60), Expect = 2.7
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 11/61 (18%)
Frame = +2
Query: 46 IITFLCITGLLITR--WFFSGHLPFSDLYESLIFLSWGFS---------IFYMVPRFKKQ 94
I++ I+ LL+ W FSG LP + ++ W F+ F P F K
Sbjct: 146 ILSVFAISTLLVVSFIWIFSGRLPKKSKVDRVLMCWWAFTGLTHIILEGYFVFAPEFFKD 325
Query: 95 K 95
K
Sbjct: 326 K 328
>AV767030
Length = 460
Score = 27.3 bits (59), Expect = 3.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 240 GILSGAVWANEAWGSYWNWD 259
G+ S W+N A+ SYW WD
Sbjct: 240 GLTSRRNWSNGAY*SYWLWD 181
>TC17927 UP|Q8GRY7 (Q8GRY7) bZIP with a Ring-finger motif, complete
Length = 1793
Score = 26.9 bits (58), Expect = 4.7
Identities = 15/41 (36%), Positives = 23/41 (55%)
Frame = -3
Query: 13 ISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCIT 53
I F ++ I+IS+HL TLFV + + II+ + IT
Sbjct: 780 IIFIIIIIIISLHLRTLFVTFVSSLALGTVWAHIISLVFIT 658
>TC10486 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomerase
precursor , partial (9%)
Length = 511
Score = 26.6 bits (57), Expect = 6.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 52 ITGLLITRWFFSGHLPFSDLYESLIFL 78
+TG++ +RWF G F DL E+ + L
Sbjct: 422 LTGVVFSRWFCGGFGGFFDLVEAGVLL 502
>AV778891
Length = 621
Score = 26.6 bits (57), Expect = 6.1
Identities = 17/38 (44%), Positives = 21/38 (54%)
Frame = -3
Query: 280 KNKKLEGLNSSIVASIGFLIIWICYFGVNLLGIGLHNY 317
K+K LE LN +A GFL + CY V+ G HNY
Sbjct: 595 KSKFLERLNYLELAFAGFLFLCGCYDYVH----GKHNY 494
>AV765523
Length = 564
Score = 26.6 bits (57), Expect = 6.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 295 IGFLIIWICYFGVNLLGI 312
+G+L+IWICY + GI
Sbjct: 355 LGYLVIWICYLAPSEKGI 408
>TC8423 similar to UP|AAQ62572 (AAQ62572) Glycosyltransferase 10, partial
(35%)
Length = 1053
Score = 26.6 bits (57), Expect = 6.1
Identities = 17/38 (44%), Positives = 21/38 (54%)
Frame = +3
Query: 280 KNKKLEGLNSSIVASIGFLIIWICYFGVNLLGIGLHNY 317
K+K LE LN +A GFL + CY V+ G HNY
Sbjct: 435 KSKFLERLNYLELAFAGFLFLCGCYDYVH----GKHNY 536
>TC14154 similar to UP|P93333 (P93333) PR10-1 protein (Class 10 PR protein),
partial (82%)
Length = 432
Score = 26.2 bits (56), Expect = 8.0
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 68 FSDLYESLIFLSWGFSIFYM-VPRFKKQKNDLSTIIAPSVIFTQG---FATSGLLTEMHQ 123
FS IFLSW FS+ M +P Q T ++P ++ F S +L + +
Sbjct: 12 FSSCVSPPIFLSWVFSLSRMRLPPL*LQLG--FTKLSPLMVIPSSQRLFQASRVLKLLKE 185
Query: 124 SVILVPALQSHWL 136
V+L P+ SH L
Sbjct: 186 MVVLEPSRSSHSL 224
>AW719889
Length = 623
Score = 26.2 bits (56), Expect = 8.0
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -1
Query: 48 TFLCITGLLITRWFFSGH-LPF 68
TF CI +L+ WF S H LPF
Sbjct: 482 TFQCIQQILVVLWF*SSHKLPF 417
>TC12452
Length = 370
Score = 26.2 bits (56), Expect = 8.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 254 SYWNWDPKETWAFITWTIFAIYLHS 278
S+ W P +T F+TW ++LH+
Sbjct: 256 SFMLWGPTQTLLFLTWLC*DLHLHA 330
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.329 0.142 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,446,020
Number of Sequences: 28460
Number of extensions: 99832
Number of successful extensions: 775
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of query: 323
length of database: 4,897,600
effective HSP length: 90
effective length of query: 233
effective length of database: 2,336,200
effective search space: 544334600
effective search space used: 544334600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Description of BAB33244.1