TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BAB33192.1	34 aa
         (34 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CK606594                                                               65  1e-11

>CK606594 
          Length = 307

 Score = 64.7 bits (156), Expect = 1e-11
 Identities = 33/34 (97%), Positives = 34/34 (99%)
 Frame = +2

Query: 1   MEVNILAFIATALFILVPTAFLLIIYVKTVSQSD 34
           MEVNILAFIATALFILVPTAFLLIIYVKTVSQ+D
Sbjct: 182 MEVNILAFIATALFILVPTAFLLIIYVKTVSQND 283


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.334    0.144    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 935,115
Number of Sequences: 63676
Number of extensions: 4202
Number of successful extensions: 61
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of query: 34
length of database: 12,639,632
effective HSP length: 10
effective length of query: 24
effective length of database: 12,002,872
effective search space: 288068928
effective search space used: 288068928
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 53 (25.0 bits)