BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0544.2
(141 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O65759 Histone H2A [Cicer arietinum] 254 4e-67
UniRef100_Q9S9K7 T22H22.12 protein [Arabidopsis thaliana] 249 7e-66
UniRef100_O04848 F7G19.24 protein [Arabidopsis thaliana] 247 3e-65
UniRef100_P35063 Histone H2A [Picea abies] 245 2e-64
UniRef100_Q8LAC0 Putative histone H2A [Arabidopsis thaliana] 243 9e-64
UniRef100_Q8LLP5 Hypothetical protein OSJNBa0031O09.03 [Oryza sa... 226 8e-59
UniRef100_Q9S994 Histone H2A homolog [Phaseolus vulgaris] 202 1e-51
UniRef100_O81826 Putative histone H2A [Arabidopsis thaliana] 202 1e-51
UniRef100_P16866 Histone H2A-IV [Volvox carteri] 202 2e-51
UniRef100_P50567 Histone H2A [Chlamydomonas reinhardtii] 201 2e-51
UniRef100_P16865 Histone H2A-III [Volvox carteri] 201 2e-51
UniRef100_Q9LD28 Histone H2A [Arabidopsis thaliana] 201 4e-51
UniRef100_Q8L8Z9 Histone H2A-like protein [Arabidopsis thaliana] 199 8e-51
UniRef100_Q42680 Histone H2A [Chlamydomonas reinhardtii] 199 8e-51
UniRef100_Q84NJ4 Putative histone H2A [Oryza sativa] 199 1e-50
UniRef100_Q6ZL43 Histone H2A [Oryza sativa] 198 2e-50
UniRef100_Q43312 Protein H2A [Triticum aestivum] 198 2e-50
UniRef100_Q6ZL42 Putative histone H2A [Oryza sativa] 197 4e-50
UniRef100_Q9LHQ5 Putative histone H2A protein [Arabidopsis thali... 197 4e-50
UniRef100_Q9C681 Histone H2A, putative [Arabidopsis thaliana] 197 5e-50
>UniRef100_O65759 Histone H2A [Cicer arietinum]
Length = 139
Score = 254 bits (648), Expect = 4e-67
Identities = 133/141 (94%), Positives = 134/141 (94%), Gaps = 2/141 (1%)
Query: 1 MSSTGGNNTKGGRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 60
MSST TKGGRGKPKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA
Sbjct: 1 MSSTA--TTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 58
Query: 61 VLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 120
VLEYLAAEVLELAGNAARDNK NRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ
Sbjct: 59 VLEYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 118
Query: 121 TLLPKKAGKGKGEIGSASQEF 141
TLLPKK GKGKGEIGSASQEF
Sbjct: 119 TLLPKKVGKGKGEIGSASQEF 139
>UniRef100_Q9S9K7 T22H22.12 protein [Arabidopsis thaliana]
Length = 142
Score = 249 bits (637), Expect = 7e-66
Identities = 128/140 (91%), Positives = 129/140 (91%)
Query: 2 SSTGGNNTKGGRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 61
S G TKGGRGKPKA KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 3 SGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 62
Query: 62 LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 121
LEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 63 LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 122
Query: 122 LLPKKAGKGKGEIGSASQEF 141
LLP K GK KG+IGSASQEF
Sbjct: 123 LLPSKVGKNKGDIGSASQEF 142
>UniRef100_O04848 F7G19.24 protein [Arabidopsis thaliana]
Length = 142
Score = 247 bits (631), Expect = 3e-65
Identities = 126/140 (90%), Positives = 129/140 (92%)
Query: 2 SSTGGNNTKGGRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 61
+ G TKGGRGKPKA KSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSAV
Sbjct: 3 TGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAV 62
Query: 62 LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 121
LEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 63 LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 122
Query: 122 LLPKKAGKGKGEIGSASQEF 141
LLP K GK KG+IGSASQEF
Sbjct: 123 LLPSKVGKNKGDIGSASQEF 142
>UniRef100_P35063 Histone H2A [Picea abies]
Length = 138
Score = 245 bits (625), Expect = 2e-64
Identities = 128/141 (90%), Positives = 133/141 (93%), Gaps = 3/141 (2%)
Query: 1 MSSTGGNNTKGGRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 60
MSS+G KGGRGK K+ KSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+A
Sbjct: 1 MSSSGA---KGGRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAA 57
Query: 61 VLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 120
VLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ
Sbjct: 58 VLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQ 117
Query: 121 TLLPKKAGKGKGEIGSASQEF 141
LLPKK+GK KGEIGSASQEF
Sbjct: 118 VLLPKKSGKDKGEIGSASQEF 138
>UniRef100_Q8LAC0 Putative histone H2A [Arabidopsis thaliana]
Length = 143
Score = 243 bits (619), Expect = 9e-64
Identities = 126/141 (89%), Positives = 129/141 (91%), Gaps = 1/141 (0%)
Query: 2 SSTGGNNTKGGRGKPKAAKSVSRSQKAGLQFPVGRIA-RFLKAGKYAERVGAGAPVYLSA 60
+ G TKGGRGKPKA KSVSRS KAGLQFPVGRIA RFLK+GKYAERVGAGAPVYLSA
Sbjct: 3 TGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIALRFLKSGKYAERVGAGAPVYLSA 62
Query: 61 VLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 120
VLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ
Sbjct: 63 VLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 122
Query: 121 TLLPKKAGKGKGEIGSASQEF 141
TLLP K GK KG+IGSASQEF
Sbjct: 123 TLLPSKVGKNKGDIGSASQEF 143
>UniRef100_Q8LLP5 Hypothetical protein OSJNBa0031O09.03 [Oryza sativa]
Length = 137
Score = 226 bits (576), Expect = 8e-59
Identities = 121/140 (86%), Positives = 126/140 (89%), Gaps = 5/140 (3%)
Query: 2 SSTGGNNTKGGRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 61
SS GG GGRGK K K+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAPVYLSAV
Sbjct: 3 SSQGG----GGRGKAKTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAV 58
Query: 62 LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 121
LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNI Q
Sbjct: 59 LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQV 118
Query: 122 LLPKKAGKGKGEIGSASQEF 141
LLPKK G GKG+IGSASQEF
Sbjct: 119 LLPKKGG-GKGDIGSASQEF 137
>UniRef100_Q9S994 Histone H2A homolog [Phaseolus vulgaris]
Length = 146
Score = 202 bits (515), Expect = 1e-51
Identities = 107/137 (78%), Positives = 120/137 (87%), Gaps = 3/137 (2%)
Query: 1 MSSTGGNNT--KGGRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYL 58
MSST T KGGRGKPK KSVSRS KAGLQFPVGRIAR+LKAG+YA+RVG+G+PVYL
Sbjct: 1 MSSTEVATTTKKGGRGKPKTTKSVSRSSKAGLQFPVGRIARYLKAGRYAQRVGSGSPVYL 60
Query: 59 SAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLP-N 117
SAVLEYLAAEVLELAG AARDNKK+RI+PRHIQLAVRNDEELSKL+GSVTIA+GGVLP N
Sbjct: 61 SAVLEYLAAEVLELAGIAARDNKKSRIIPRHIQLAVRNDEELSKLMGSVTIASGGVLPKN 120
Query: 118 IHQTLLPKKAGKGKGEI 134
+ P+K GKG+GE+
Sbjct: 121 SSKICCPRKTGKGEGEV 137
>UniRef100_O81826 Putative histone H2A [Arabidopsis thaliana]
Length = 131
Score = 202 bits (515), Expect = 1e-51
Identities = 107/124 (86%), Positives = 109/124 (87%), Gaps = 4/124 (3%)
Query: 12 GRGKP----KAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 67
GRGK A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3 GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 68 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKA 127
EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKKA
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122
Query: 128 GKGK 131
G K
Sbjct: 123 GSSK 126
>UniRef100_P16866 Histone H2A-IV [Volvox carteri]
Length = 129
Score = 202 bits (513), Expect = 2e-51
Identities = 101/122 (82%), Positives = 109/122 (88%)
Query: 12 GRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLE 71
G+GK K+VSRS KAGLQFPVGRIAR+LK GKYAER+GAGAPVYL+AVLEYL AEVLE
Sbjct: 5 GKGKTAGKKAVSRSSKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLE 64
Query: 72 LAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKAGKGK 131
LAGNAARDNKKNRIVPRHIQLA+RNDEEL KLLG VTIA+GGVLPNIH LLPKK+ GK
Sbjct: 65 LAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGDVTIASGGVLPNIHAVLLPKKSKGGK 124
Query: 132 GE 133
GE
Sbjct: 125 GE 126
>UniRef100_P50567 Histone H2A [Chlamydomonas reinhardtii]
Length = 129
Score = 201 bits (512), Expect = 2e-51
Identities = 101/122 (82%), Positives = 108/122 (87%)
Query: 12 GRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLE 71
G+GK K+VSRS KAGLQFPVGRIAR+LK GKYAER+GAGAPVYL+AVLEYL AEVLE
Sbjct: 5 GKGKTSGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLE 64
Query: 72 LAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKAGKGK 131
LAGNAARDNKKNRIVPRHIQLA+RNDEEL KLLG VTIA+GGVLPNIH LLPKK GK
Sbjct: 65 LAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKKTKGGK 124
Query: 132 GE 133
GE
Sbjct: 125 GE 126
>UniRef100_P16865 Histone H2A-III [Volvox carteri]
Length = 129
Score = 201 bits (512), Expect = 2e-51
Identities = 101/122 (82%), Positives = 109/122 (88%)
Query: 12 GRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLE 71
G+GK K+VSRS KAGLQFPVGRIAR+LK GKYAER+GAGAPVYL+AVLEYL AEVLE
Sbjct: 5 GKGKTAGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLE 64
Query: 72 LAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKAGKGK 131
LAGNAARDNKKNRIVPRHIQLA+RNDEEL KLLG VTIA+GGVLPNIH LLPKK+ GK
Sbjct: 65 LAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGDVTIASGGVLPNIHAVLLPKKSKGGK 124
Query: 132 GE 133
GE
Sbjct: 125 GE 126
>UniRef100_Q9LD28 Histone H2A [Arabidopsis thaliana]
Length = 130
Score = 201 bits (510), Expect = 4e-51
Identities = 106/124 (85%), Positives = 109/124 (87%), Gaps = 4/124 (3%)
Query: 12 GRGKPK----AAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 67
GRGK A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3 GRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 68 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKA 127
EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKKA
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122
Query: 128 GKGK 131
G K
Sbjct: 123 GASK 126
>UniRef100_Q8L8Z9 Histone H2A-like protein [Arabidopsis thaliana]
Length = 131
Score = 199 bits (507), Expect = 8e-51
Identities = 106/124 (85%), Positives = 108/124 (86%), Gaps = 4/124 (3%)
Query: 12 GRGKP----KAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 67
GRGK A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3 GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 68 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKA 127
EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLL VTIANGGV+PNIH LLPKKA
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLEDVTIANGGVMPNIHNLLLPKKA 122
Query: 128 GKGK 131
G K
Sbjct: 123 GSSK 126
>UniRef100_Q42680 Histone H2A [Chlamydomonas reinhardtii]
Length = 130
Score = 199 bits (507), Expect = 8e-51
Identities = 100/121 (82%), Positives = 107/121 (87%)
Query: 12 GRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLE 71
G+GK K+VSRS KAGLQFPVGRIAR+LK GKYAER+GAGAPVYL+AVLEYL AEVLE
Sbjct: 5 GKGKTSGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLE 64
Query: 72 LAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKAGKGK 131
LAGNAARDNKKNRIVPRHIQLA+RNDEEL KLLG VTIA+GGVLPNIH LLPKK GK
Sbjct: 65 LAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKKTKGGK 124
Query: 132 G 132
G
Sbjct: 125 G 125
>UniRef100_Q84NJ4 Putative histone H2A [Oryza sativa]
Length = 134
Score = 199 bits (505), Expect = 1e-50
Identities = 104/121 (85%), Positives = 109/121 (89%), Gaps = 4/121 (3%)
Query: 12 GRGKP----KAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 67
GRGK A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3 GRGKAIGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 68 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKA 127
EVLELAGNAARDNKK RIVPRHIQLAVRNDEELS+LLG+VTIANGGV+PNIH LLPKKA
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKA 122
Query: 128 G 128
G
Sbjct: 123 G 123
>UniRef100_Q6ZL43 Histone H2A [Oryza sativa]
Length = 135
Score = 198 bits (504), Expect = 2e-50
Identities = 104/124 (83%), Positives = 109/124 (87%), Gaps = 4/124 (3%)
Query: 12 GRGKP----KAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 67
GRGK A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3 GRGKAIGAGAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 68 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKA 127
EVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG TIA+GGV+PNIHQ LLPKKA
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKA 122
Query: 128 GKGK 131
G K
Sbjct: 123 GSSK 126
>UniRef100_Q43312 Protein H2A [Triticum aestivum]
Length = 134
Score = 198 bits (504), Expect = 2e-50
Identities = 104/124 (83%), Positives = 110/124 (87%), Gaps = 4/124 (3%)
Query: 12 GRGKP----KAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 67
GRGK A K++SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3 GRGKAIGSGAAKKAISRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 68 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKA 127
EVLELAGNAARDNKK RIVPRHIQLAVRNDEELS+LLG VTIA+GGV+PNIH LLPKKA
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGMVTIASGGVMPNIHNLLLPKKA 122
Query: 128 GKGK 131
G K
Sbjct: 123 GGSK 126
>UniRef100_Q6ZL42 Putative histone H2A [Oryza sativa]
Length = 135
Score = 197 bits (501), Expect = 4e-50
Identities = 103/121 (85%), Positives = 110/121 (90%), Gaps = 4/121 (3%)
Query: 12 GRGKP----KAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 67
GRGK A K++SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3 GRGKAIGSGAAKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 68 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKA 127
EVLELAGNAARDNKK RIVPRHIQLAVRNDEELS+LLG+VTIA+GGV+PNIH LLPKKA
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKA 122
Query: 128 G 128
G
Sbjct: 123 G 123
>UniRef100_Q9LHQ5 Putative histone H2A protein [Arabidopsis thaliana]
Length = 132
Score = 197 bits (501), Expect = 4e-50
Identities = 105/124 (84%), Positives = 107/124 (85%), Gaps = 4/124 (3%)
Query: 12 GRGKPK----AAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 67
GRGK A KS SRS KAGLQFPVGRIARFLK GKYA RVGAGAPVYL+AVLEYLAA
Sbjct: 3 GRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAA 62
Query: 68 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKA 127
EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKKA
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKA 122
Query: 128 GKGK 131
G K
Sbjct: 123 GASK 126
>UniRef100_Q9C681 Histone H2A, putative [Arabidopsis thaliana]
Length = 132
Score = 197 bits (500), Expect = 5e-50
Identities = 103/124 (83%), Positives = 107/124 (86%), Gaps = 4/124 (3%)
Query: 12 GRGKP----KAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 67
GRGK A K+ +RS KAGLQFPVGRIARFLK GKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3 GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 68 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKA 127
EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122
Query: 128 GKGK 131
G K
Sbjct: 123 GASK 126
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.312 0.132 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,662,142
Number of Sequences: 2790947
Number of extensions: 8786489
Number of successful extensions: 16786
Number of sequences better than 10.0: 537
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 16099
Number of HSP's gapped (non-prelim): 555
length of query: 141
length of database: 848,049,833
effective HSP length: 117
effective length of query: 24
effective length of database: 521,509,034
effective search space: 12516216816
effective search space used: 12516216816
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0544.2