BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0476b.5
(58 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q949K9 Putative polyprotein [Cicer arietinum] 87 9e-17
UniRef100_Q6L3Q2 Putative polyprotein, 3'-partial [Solanum demis... 70 2e-11
UniRef100_Q7XJX8 OSJNBa0063C18.15 protein [Oryza sativa] 68 7e-11
UniRef100_Q7XPS2 OSJNBa0065O17.9 protein [Oryza sativa] 68 7e-11
UniRef100_Q8S680 Putative polyprotein [Oryza sativa] 68 7e-11
UniRef100_Q94DL2 Putative polyprotein [Oryza sativa] 67 9e-11
UniRef100_Q7X726 OSJNBa0089N06.1 protein [Oryza sativa] 67 9e-11
UniRef100_Q75HQ1 Putative polyprotein [Oryza sativa] 67 9e-11
UniRef100_Q9ZSE2 Putative integrase [Oryza sativa] 67 9e-11
UniRef100_Q7XU14 OSJNBa0091D06.10 protein [Oryza sativa] 67 9e-11
UniRef100_Q7XSU3 OSJNBa0039K24.13 protein [Oryza sativa] 67 9e-11
UniRef100_Q7XQR0 OSJNBa0091D06.9 protein [Oryza sativa] 67 9e-11
UniRef100_Q7XP03 OSJNBb0013J13.17 protein [Oryza sativa] 67 9e-11
UniRef100_Q7XNK8 OSJNBb0062B06.9 protein [Oryza sativa] 67 9e-11
UniRef100_Q7XN91 OSJNBa0011F23.1 protein [Oryza sativa] 67 9e-11
UniRef100_Q7XE96 Putative gag-pol protein [Oryza sativa] 67 9e-11
UniRef100_Q7XBX8 Putative gypsy-type retrotransposon polyprotein... 67 9e-11
UniRef100_Q6L494 Putative polyprotein [Oryza sativa] 67 9e-11
UniRef100_Q8SB62 Putative polyprotein [Oryza sativa] 67 1e-10
UniRef100_Q7XXG5 OSJNBb0089K24.5 protein [Oryza sativa] 67 2e-10
>UniRef100_Q949K9 Putative polyprotein [Cicer arietinum]
Length = 655
Score = 87.4 bits (215), Expect = 9e-17
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 1 KLILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
K IL+E HKS+LSIHPG TKMYQDL+ ++W PGMKK V EYV TCLT QKAKVE
Sbjct: 327 KTILEEAHKSKLSIHPGATKMYQDLRQNYWWPGMKKHVAEYVSTCLTCQKAKVE 380
>UniRef100_Q6L3Q2 Putative polyprotein, 3'-partial [Solanum demissum]
Length = 1622
Score = 69.7 bits (169), Expect = 2e-11
Identities = 29/54 (53%), Positives = 40/54 (73%)
Query: 1 KLILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
+LIL EGH+SR SIHPG TKMY+DL+ H+W GM++ + ++V CL Q+ K E
Sbjct: 1324 QLILSEGHESRYSIHPGTTKMYRDLRQHYWWSGMRRDIADFVSRCLCCQQVKAE 1377
>UniRef100_Q7XJX8 OSJNBa0063C18.15 protein [Oryza sativa]
Length = 1764
Score = 67.8 bits (164), Expect = 7e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1388 LILKEAHESAYSIHPGSTKMYQDIKAYFWWTGMKRDVAEYVALCDVCQRVKAE 1440
>UniRef100_Q7XPS2 OSJNBa0065O17.9 protein [Oryza sativa]
Length = 1851
Score = 67.8 bits (164), Expect = 7e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1431 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDVCQRVKAE 1483
>UniRef100_Q8S680 Putative polyprotein [Oryza sativa]
Length = 1569
Score = 67.8 bits (164), Expect = 7e-11
Identities = 32/53 (60%), Positives = 35/53 (65%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E HKS S+HPG TKMYQDLK +W P MK+ V EYV C QK K E
Sbjct: 1147 LILKEAHKSAYSLHPGSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQKVKAE 1199
>UniRef100_Q94DL2 Putative polyprotein [Oryza sativa]
Length = 1572
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1152 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 1204
>UniRef100_Q7X726 OSJNBa0089N06.1 protein [Oryza sativa]
Length = 1851
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1431 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 1483
>UniRef100_Q75HQ1 Putative polyprotein [Oryza sativa]
Length = 1649
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1228 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 1280
>UniRef100_Q9ZSE2 Putative integrase [Oryza sativa]
Length = 218
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 50 LILKEAHQSAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 102
>UniRef100_Q7XU14 OSJNBa0091D06.10 protein [Oryza sativa]
Length = 1831
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1433 LILKEAHESAYSIHPGSTKMYQDIKAYFWWSGMKRDVAEYVALCDICQRVKAE 1485
>UniRef100_Q7XSU3 OSJNBa0039K24.13 protein [Oryza sativa]
Length = 1851
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1431 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 1483
>UniRef100_Q7XQR0 OSJNBa0091D06.9 protein [Oryza sativa]
Length = 1762
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1342 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 1394
>UniRef100_Q7XP03 OSJNBb0013J13.17 protein [Oryza sativa]
Length = 864
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 594 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 646
>UniRef100_Q7XNK8 OSJNBb0062B06.9 protein [Oryza sativa]
Length = 1680
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1398 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVTEYVALCDICQRVKAE 1450
>UniRef100_Q7XN91 OSJNBa0011F23.1 protein [Oryza sativa]
Length = 1787
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1367 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 1419
>UniRef100_Q7XE96 Putative gag-pol protein [Oryza sativa]
Length = 1829
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1431 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 1483
>UniRef100_Q7XBX8 Putative gypsy-type retrotransposon polyprotein [Oryza sativa]
Length = 762
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 460 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 512
>UniRef100_Q6L494 Putative polyprotein [Oryza sativa]
Length = 1688
Score = 67.4 bits (163), Expect = 9e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EYV C Q+ K E
Sbjct: 1268 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAE 1320
>UniRef100_Q8SB62 Putative polyprotein [Oryza sativa]
Length = 1322
Score = 67.0 bits (162), Expect = 1e-10
Identities = 30/53 (56%), Positives = 36/53 (67%)
Query: 2 LILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
LIL E H+S SIHPG TKMYQD+K +FW GMK+ V EY+ C Q+ K E
Sbjct: 902 LILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYIALCDICQRVKAE 954
>UniRef100_Q7XXG5 OSJNBb0089K24.5 protein [Oryza sativa]
Length = 1365
Score = 66.6 bits (161), Expect = 2e-10
Identities = 29/54 (53%), Positives = 37/54 (67%)
Query: 1 KLILDEGHKSRLSIHPGMTKMYQDLKLHFWCPGMKKRVVEYVLTCLTYQKAKVE 54
KLIL E H+S+ SIHPG TKMYQDLK+ +W MK+ + E+V C Q+ K E
Sbjct: 999 KLILQEAHESQYSIHPGSTKMYQDLKMKYWWVSMKREIAEFVALCDVCQRVKAE 1052
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,038,272
Number of Sequences: 2790947
Number of extensions: 2468195
Number of successful extensions: 5612
Number of sequences better than 10.0: 563
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 5050
Number of HSP's gapped (non-prelim): 568
length of query: 58
length of database: 848,049,833
effective HSP length: 34
effective length of query: 24
effective length of database: 753,157,635
effective search space: 18075783240
effective search space used: 18075783240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0476b.5