BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0476b.2
(264 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6AT88 Hypothetical protein OSJNBa0069I13.11 [Oryza sa... 40 0.061
UniRef100_Q9FYX4 BAC19.2 [Lycopersicon esculentum] 38 0.23
UniRef100_UPI00002B7553 UPI00002B7553 UniRef100 entry 35 2.6
UniRef100_Q9CA05 Hypothetical protein T1G12.15 [Arabidopsis thal... 35 2.6
UniRef100_Q6AT18 Hypothetical protein OSJNBa0029B02.11 [Oryza sa... 34 3.4
UniRef100_Q8D373 PlsB protein [Wigglesworthia glossinidia brevip... 33 5.7
UniRef100_UPI000043035B UPI000043035B UniRef100 entry 33 7.5
UniRef100_Q8I6I6 Polyketide synthase [Cryptosporidium parvum] 33 7.5
UniRef100_Q8TZ48 Predicted ABC-class ATPase, RNase L inhibitor h... 33 7.5
UniRef100_Q948F3 Putative ribonucleotide reductase [Oryza sativa] 33 9.8
>UniRef100_Q6AT88 Hypothetical protein OSJNBa0069I13.11 [Oryza sativa]
Length = 309
Score = 40.0 bits (92), Expect = 0.061
Identities = 44/165 (26%), Positives = 71/165 (42%), Gaps = 13/165 (7%)
Query: 6 DVLYHVFHRLPAYIVCRFKCVGKRVDYTRIPRFCEEQADHMLSVGDLHIFTSPVSDYHQV 65
D++ + RLPA VCRFKCV R R ++ H LS G + + P++D V
Sbjct: 22 DLIVDILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLS-GFISRYYGPLNDDELV 80
Query: 66 TGVGLHNL------LEDGPAAGVPTDFFNVVARSGKILSSWNGLIVVRLRWKKVLR---- 115
+ ++ E+ P+ F + S NGL++ L K R
Sbjct: 81 SIPHFDSIDGGEEDEEEHRLVPDPSLSFLLGYMSISPKDCCNGLLLC-LCCKNSPRDESD 139
Query: 116 LLICNPVTSSWAPLRTRCGEYDANANVNIIIIPATAPTRNDYRLL 160
++CNP T W L +YD A++ + PA +P + + +L
Sbjct: 140 YVVCNPATQRWIIL-PEIDDYDQLASIRLCFDPALSPYFHVFAIL 183
>UniRef100_Q9FYX4 BAC19.2 [Lycopersicon esculentum]
Length = 358
Score = 38.1 bits (87), Expect = 0.23
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Query: 76 DGPAAGVPTDFFNVVARSGKILSSWNGLIVVRLR-WKKVLRLLICNPVTSSWAPLRTRCG 134
D + GVP F N + I SS NGL+ R R KV ICNP T W L
Sbjct: 85 DANSCGVPDPFLNFLPEPVDIKSSSNGLLCCRGREGDKV--YYICNPFTKQWKELPKSNA 142
Query: 135 EYDANANVNIIIIPATAPTRNDYRLLSVTRQNKIFPPYVLKEYNQIADQWQVLNPDMNLG 194
+ ++ + ++ P+ +Y+++ Y W++ +M G
Sbjct: 143 YHGSDPAIVLLFEPSLLNFVAEYKIICAFPSTDFDKATEFDIYYSREGCWKIAE-EMCFG 201
Query: 195 DRKLNISKPAIVNEWIYFMS 214
R + VN +Y+M+
Sbjct: 202 SRTIFPKSGIHVNGVVYWMT 221
>UniRef100_UPI00002B7553 UPI00002B7553 UniRef100 entry
Length = 215
Score = 34.7 bits (78), Expect = 2.6
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 136 YDANANVNIIIIPATAPTRNDYRLLSVTRQNKIFPPYVLKEYNQIADQWQVLNPDMNLGD 195
Y N N+ I+ I +ND+RL +++ NKI ++ ++ VLN +
Sbjct: 86 YIKNKNLKILHI-GNFDEKNDHRLFNISIANKISKGFIRNSHD-------VLNFSYRDFN 137
Query: 196 RKLNISKPAIVNEWIYFMSDNY 217
K+ I +NE IY +SDNY
Sbjct: 138 SKMLIKNNKALNEKIYNISDNY 159
>UniRef100_Q9CA05 Hypothetical protein T1G12.15 [Arabidopsis thaliana]
Length = 400
Score = 34.7 bits (78), Expect = 2.6
Identities = 45/182 (24%), Positives = 77/182 (41%), Gaps = 36/182 (19%)
Query: 6 DVLYHVFHRLPAYIVCRFKCVGKRVDYTRIPR-------FCEEQA--DHML----SVGDL 52
D++ + R+PA RF+CV D+ + R F + + H+L + G
Sbjct: 38 DLMVEILSRVPAKSAARFRCVSN--DWNSLLRSPYLTNLFLKRSSARPHLLITFQAEGKW 95
Query: 53 HIFTSP---VSDYHQVTGVGLHNLLEDGPAAGVPTDF-FNVVARSGKILSSWNGLIVVRL 108
F+SP +SD + NL+ VP D+ F V ++ + N ++ R
Sbjct: 96 SFFSSPEYLISDQNS-------NLVVVDNHMDVPKDYSFGVCVPVCGLMCTSNEWVLSR- 147
Query: 109 RWKKVLRLLICNPVTSSWAPL-RTRCGEYDANANVNIIIIPATAPTRNDYRLLSVTRQNK 167
K+ R++ICNP T + L + R + N+I P Y++L +T + K
Sbjct: 148 --KRDARMMICNPSTGQFKSLPKVR------SCRGNVITYIGYNPIEKQYKVLCMTIREK 199
Query: 168 IF 169
F
Sbjct: 200 PF 201
>UniRef100_Q6AT18 Hypothetical protein OSJNBa0029B02.11 [Oryza sativa]
Length = 428
Score = 34.3 bits (77), Expect = 3.4
Identities = 33/128 (25%), Positives = 52/128 (39%), Gaps = 14/128 (10%)
Query: 6 DVLYHVFHRLPAYIVCRFKCVGKRVDYTRIPRFCEEQADHMLSVGDLHIFTSPVSDYHQV 65
D+L + R+P +CR KCV +R R DH + H+ + V ++
Sbjct: 24 DLLVEILSRVPYKSLCRSKCVSRRW------RRVISHPDHRHLLPRYHLGDAIVGFFYSD 77
Query: 66 TGVGLHNLLEDGPAAGVPTDFFNVVARSGKILSSWNGLIVVRLRWK----KVLRLLICNP 121
T N+ +G P+ F +L S NGL++ R W+ + L+ NP
Sbjct: 78 T---FTNVTGEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRC-WRLADPRRFDYLVVNP 133
Query: 122 VTSSWAPL 129
T W L
Sbjct: 134 ATEQWVIL 141
>UniRef100_Q8D373 PlsB protein [Wigglesworthia glossinidia brevipalpis]
Length = 794
Score = 33.5 bits (75), Expect = 5.7
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 140 ANVNIIIIPATAPTRNDYRLLSVTRQNKIFPPYVLKEYNQIADQWQVLNPDMNLGDRKLN 199
+N++I+IIP N ++ + K + K+ N I Q +N NLG +N
Sbjct: 413 SNLSIVIIPTYIGYEN---IIEIKSYEKEILGFKKKKENMI-QILQGINKLNNLGSVCIN 468
Query: 200 ISKPAIVNEWIYFMSDNYHYMNFID 224
P I+N W + N HY+ + D
Sbjct: 469 FGCPIILNNW---LKKNKHYIKYFD 490
>UniRef100_UPI000043035B UPI000043035B UniRef100 entry
Length = 13413
Score = 33.1 bits (74), Expect = 7.5
Identities = 18/84 (21%), Positives = 37/84 (43%), Gaps = 2/84 (2%)
Query: 87 FNVVARSGKILSSWNGL--IVVRLRWKKVLRLLICNPVTSSWAPLRTRCGEYDANANVNI 144
FN + + I+ WN + + + + ++L+L+ N + W + EY+ +
Sbjct: 3718 FNQLGKISLIIVDWNSISNLKINKNFCQILKLIYNNVINKKWFEKEYQLLEYNNEIKIKT 3777
Query: 145 IIIPATAPTRNDYRLLSVTRQNKI 168
I I + N+Y L +T + I
Sbjct: 3778 IKIKESISPYNNYMALKLTNRGAI 3801
>UniRef100_Q8I6I6 Polyketide synthase [Cryptosporidium parvum]
Length = 13414
Score = 33.1 bits (74), Expect = 7.5
Identities = 18/84 (21%), Positives = 37/84 (43%), Gaps = 2/84 (2%)
Query: 87 FNVVARSGKILSSWNGL--IVVRLRWKKVLRLLICNPVTSSWAPLRTRCGEYDANANVNI 144
FN + + I+ WN + + + + ++L+L+ N + W + EY+ +
Sbjct: 3718 FNQLGKISLIIVDWNSISNLKINKNFCQILKLIYNNVINKKWFEKEYQLLEYNNEIKIKT 3777
Query: 145 IIIPATAPTRNDYRLLSVTRQNKI 168
I I + N+Y L +T + I
Sbjct: 3778 IKIKESISPYNNYMALKLTNRGAI 3801
>UniRef100_Q8TZ48 Predicted ABC-class ATPase, RNase L inhibitor homolog [Methanopyrus
kandleri]
Length = 599
Score = 33.1 bits (74), Expect = 7.5
Identities = 19/65 (29%), Positives = 28/65 (42%)
Query: 20 VCRFKCVGKRVDYTRIPRFCEEQADHMLSVGDLHIFTSPVSDYHQVTGVGLHNLLEDGPA 79
+C KC + R+P EE+ H G ++ PV +VTGV N + A
Sbjct: 61 ICAQKCPFDAIKVVRLPEELEEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTA 120
Query: 80 AGVPT 84
A + T
Sbjct: 121 AKILT 125
>UniRef100_Q948F3 Putative ribonucleotide reductase [Oryza sativa]
Length = 236
Score = 32.7 bits (73), Expect = 9.8
Identities = 27/112 (24%), Positives = 56/112 (49%), Gaps = 11/112 (9%)
Query: 104 IVVRLRWKKVLRLLICNPVTS--SWAPLRTRCGEYDANANVNIIIIPATAPTRNDYRLLS 161
++++L KKVL LI +++ +W+ LR E + V ++ A PT + ++L
Sbjct: 2 LLLKLLQKKVLMKLIAGALSARWNWSDLR----EMISKVGVRNSLLIAPMPTASTSQILG 57
Query: 162 VTRQNKIFPPYVLKEYNQ--IADQWQVLNPDMNLGDRKLNISKPAIVNEWIY 211
N+ F PY Y++ ++ ++ V+N + ++ I P + N+ +Y
Sbjct: 58 ---NNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPVLKNKIVY 106
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.325 0.140 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 480,313,305
Number of Sequences: 2790947
Number of extensions: 20040572
Number of successful extensions: 48434
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 48428
Number of HSP's gapped (non-prelim): 12
length of query: 264
length of database: 848,049,833
effective HSP length: 125
effective length of query: 139
effective length of database: 499,181,458
effective search space: 69386222662
effective search space used: 69386222662
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0476b.2