BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0476a.1
         (57 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_O23258 Hypothetical protein AT4g13970 [Arabidopsis tha...    75  4e-13
UniRef100_Q7EY40 Hypothetical protein OSJNBa0016A21.104 [Oryza s...    70  2e-11
UniRef100_Q69L44 SWIM zinc finger family protein-like [Oryza sat...    64  8e-10
UniRef100_Q8RY56 At1g60560/F8A5_10 [Arabidopsis thaliana]              62  4e-09
UniRef100_O22697 F8A5.10 protein [Arabidopsis thaliana]                62  4e-09

>UniRef100_O23258 Hypothetical protein AT4g13970 [Arabidopsis thaliana]
          Length = 675

 Score = 75.1 bits (183), Expect = 4e-13
 Identities = 38/56 (67%), Positives = 45/56 (79%)

Query: 1   RRRRVIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           R  R I RST+ELD +D VSISMWVESH + VFF+E FS++DPF LGIQTE QLQ+
Sbjct: 163 RLERSIRRSTYELDEDDDVSISMWVESHQSHVFFFEGFSDTDPFSLGIQTEWQLQQ 218


>UniRef100_Q7EY40 Hypothetical protein OSJNBa0016A21.104 [Oryza sativa]
          Length = 814

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 1   RRRRVIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           R  R I RS +ELD +D +SI++WVE+H N +F YEDFS+ D FI+GIQT+ QLQ+
Sbjct: 231 RLERKIRRSVYELDDDDAISINIWVENHQNHIFLYEDFSDKDTFIVGIQTDWQLQQ 286


>UniRef100_Q69L44 SWIM zinc finger family protein-like [Oryza sativa]
          Length = 729

 Score = 64.3 bits (155), Expect = 8e-10
 Identities = 29/52 (55%), Positives = 40/52 (76%)

Query: 5   VIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           +I RSTHELD +D  SI MWV+ +   VF+Y+D +++D F+LGIQTE QLQ+
Sbjct: 242 IIKRSTHELDLDDQASIRMWVDRNKKSVFYYQDSTDTDAFVLGIQTEWQLQQ 293


>UniRef100_Q8RY56 At1g60560/F8A5_10 [Arabidopsis thaliana]
          Length = 703

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 28/52 (53%), Positives = 38/52 (72%)

Query: 5   VIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           +I RSTHELD +D  SI +W E +   +FFY++ S +D F+LGIQTE QLQ+
Sbjct: 234 IIKRSTHELDLDDQASIKIWAERNKKSIFFYQESSETDQFMLGIQTEWQLQQ 285


>UniRef100_O22697 F8A5.10 protein [Arabidopsis thaliana]
          Length = 653

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 28/52 (53%), Positives = 38/52 (72%)

Query: 5   VIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           +I RSTHELD +D  SI +W E +   +FFY++ S +D F+LGIQTE QLQ+
Sbjct: 234 IIKRSTHELDLDDQASIKIWAERNKKSIFFYQESSETDQFMLGIQTEWQLQQ 285


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.335    0.144    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,088,792
Number of Sequences: 2790947
Number of extensions: 2350350
Number of successful extensions: 8373
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8368
Number of HSP's gapped (non-prelim): 5
length of query: 57
length of database: 848,049,833
effective HSP length: 33
effective length of query: 24
effective length of database: 755,948,582
effective search space: 18142765968
effective search space used: 18142765968
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 68 (30.8 bits)