BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0399.7
(167 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O22967 Dof zinc finger protein DOF2.3 [Arabidopsis tha... 170 1e-41
UniRef100_P68350 Dof zinc finger protein DOF1.5 [Arabidopsis tha... 166 3e-40
UniRef100_Q8S7W1 Putative zinc finger DNA-binding protein [Oryza... 131 6e-30
UniRef100_Q84PD2 Putative ascorbate oxidase promoter-binding pro... 131 7e-30
UniRef100_Q9LI39 ESTs C23582 [Oryza sativa] 131 7e-30
UniRef100_Q39540 AOBP [Cucurbita maxima] 130 1e-29
UniRef100_Q8LFV3 Dof zinc finger protein DOF3.3 [Arabidopsis tha... 129 2e-29
UniRef100_Q8W1E3 Dof zinc finger protein DOF5.5 [Arabidopsis tha... 128 5e-29
UniRef100_Q948I5 Putative H-protein promoter binding factor-2a [... 127 1e-28
UniRef100_Q93ZL5 Dof zinc finger protein DOF5.2 [Arabidopsis tha... 127 1e-28
UniRef100_Q8L5E6 Dof zinc finger protein [Hordeum vulgare] 127 1e-28
UniRef100_Q9SEZ3 Dof zinc finger protein DOF1.10 [Arabidopsis th... 126 2e-28
UniRef100_Q9SDF4 Similar to H-protein promoter binding factor-2a... 125 5e-28
UniRef100_Q9LQX4 Hypothetical Dof zinc finger protein DOF1.3 [Ar... 124 7e-28
UniRef100_Q8S0I8 PutativeDof zinc finger protein [Oryza sativa] 120 1e-26
UniRef100_Q8L5E8 Dof zinc finger protein [Hordeum vulgare] 120 1e-26
UniRef100_Q677E5 H-protein promoter binding factor [Hyacinthus o... 112 3e-24
UniRef100_Q9SXG7 Dof zinc finger protein [Oryza sativa] 106 3e-22
UniRef100_Q8LAP8 Dof zinc finger protein DOF4.6 [Arabidopsis tha... 104 1e-21
UniRef100_Q9ZSM2 Putative DNA-binding protein [Dendrobium grex M... 103 1e-21
>UniRef100_O22967 Dof zinc finger protein DOF2.3 [Arabidopsis thaliana]
Length = 170
Score = 170 bits (430), Expect = 1e-41
Identities = 96/174 (55%), Positives = 105/174 (60%), Gaps = 21/174 (12%)
Query: 8 QDSEGIKLFGTTI-----TLHGGRETRERSED-----KKGSGEERDQEKKPDKIIPCPRC 57
QDS+GIKLFG TI T+ ET ++ + S + EK+PDKII CPRC
Sbjct: 4 QDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRC 63
Query: 58 KSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMRPS----CDELLD 113
KSMETKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVPVGAGRRK +P L D
Sbjct: 64 KSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGMLGD 123
Query: 114 GGGSICDASATVEQLGLGTHREWHEAAAMFHGDFRQLFPSKRPRTTAGSGGQPC 167
G G VE + EW AAA HG FR FP KR R S GQ C
Sbjct: 124 GNG-----VRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLR--CYSDGQSC 170
>UniRef100_P68350 Dof zinc finger protein DOF1.5 [Arabidopsis thaliana]
Length = 175
Score = 166 bits (419), Expect = 3e-40
Identities = 96/181 (53%), Positives = 109/181 (60%), Gaps = 30/181 (16%)
Query: 8 QDSEGIKLFGTTITLHGGRETRERSEDKKGSGEERDQ--------------EKKPDKIIP 53
QDS+GIKLFG TIT + + E+++ + Q EK+PDKIIP
Sbjct: 4 QDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIP 63
Query: 54 CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMRP-----SC 108
CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK +P
Sbjct: 64 CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRVGGF 123
Query: 109 DELLDGGGSICDASATVEQLGLGT--HREWHEAAAMFHGDFRQLFPSKRPRTTAGSGGQP 166
ELL A+ V+Q+ L EW A A HG FR FP KR R + GQ
Sbjct: 124 AELLGA------ATGAVDQVELDALLVEEWRAATAS-HGGFRHDFPVKRLR--CYTDGQS 174
Query: 167 C 167
C
Sbjct: 175 C 175
>UniRef100_Q8S7W1 Putative zinc finger DNA-binding protein [Oryza sativa]
Length = 440
Score = 131 bits (330), Expect = 6e-30
Identities = 52/80 (65%), Positives = 67/80 (83%)
Query: 26 RETRERSEDKKGSGEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRY 85
+ + E + + + ++++ KKPDKI+PCPRC SM+TKFCY+NNYN+NQPRHFCK CQRY
Sbjct: 80 KNSSENQQQQGDTANQKEKLKKPDKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRY 139
Query: 86 WTAGGALRNVPVGAGRRKMR 105
WTAGGA+RNVPVGAGRRK +
Sbjct: 140 WTAGGAMRNVPVGAGRRKSK 159
>UniRef100_Q84PD2 Putative ascorbate oxidase promoter-binding protein AOBP [Oryza
sativa]
Length = 476
Score = 131 bits (329), Expect = 7e-30
Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 25 GRETRERSEDKKGSGEERDQE-KKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQ 83
G E++ + +G G ++ KKPDKI+PCPRC SM+TKFCY+NNYN+NQPRHFCK CQ
Sbjct: 80 GSESKSEAAQTEGGGSSEEKVLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQ 139
Query: 84 RYWTAGGALRNVPVGAGRRKMRPS 107
RYWTAGG++RN+PVGAGRRK + S
Sbjct: 140 RYWTAGGSMRNLPVGAGRRKSKSS 163
>UniRef100_Q9LI39 ESTs C23582 [Oryza sativa]
Length = 420
Score = 131 bits (329), Expect = 7e-30
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 3/80 (3%)
Query: 31 RSEDKKGSGEERDQEK---KPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWT 87
+ E++K + +E Q+K KPDKI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWT
Sbjct: 13 KDENEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWT 72
Query: 88 AGGALRNVPVGAGRRKMRPS 107
AGG +RNVPVGAGRRK + S
Sbjct: 73 AGGTMRNVPVGAGRRKSKSS 92
>UniRef100_Q39540 AOBP [Cucurbita maxima]
Length = 380
Score = 130 bits (328), Expect = 1e-29
Identities = 54/80 (67%), Positives = 66/80 (82%)
Query: 28 TRERSEDKKGSGEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWT 87
TR+ +++ + +++ KKPDKI+PCPRC SMETKFCY+NNYNVNQPRHFCK CQRYWT
Sbjct: 16 TRKTEKEQNDAPNSKEKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWT 75
Query: 88 AGGALRNVPVGAGRRKMRPS 107
GG +RNVPVGAGRRK + S
Sbjct: 76 EGGTIRNVPVGAGRRKNKNS 95
>UniRef100_Q8LFV3 Dof zinc finger protein DOF3.3 [Arabidopsis thaliana]
Length = 448
Score = 129 bits (325), Expect = 2e-29
Identities = 55/81 (67%), Positives = 65/81 (79%)
Query: 27 ETRERSEDKKGSGEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYW 86
E+ + ED + + + KKP KI+PCPRCKSMETKFCY+NNYN+NQPRHFCK CQRYW
Sbjct: 85 ESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYW 144
Query: 87 TAGGALRNVPVGAGRRKMRPS 107
TAGG +RNVPVGAGRRK + S
Sbjct: 145 TAGGTMRNVPVGAGRRKNKSS 165
>UniRef100_Q8W1E3 Dof zinc finger protein DOF5.5 [Arabidopsis thaliana]
Length = 298
Score = 128 bits (322), Expect = 5e-29
Identities = 59/97 (60%), Positives = 68/97 (69%), Gaps = 6/97 (6%)
Query: 13 IKLFGTTITLHGGRETRERSEDKKGSGEERDQE------KKPDKIIPCPRCKSMETKFCY 66
IKLFG I E + E+K + DQ KKP KI+PCPRC SMETKFCY
Sbjct: 9 IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68
Query: 67 FNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 103
+NNYNVNQPRHFCK CQRYWT+GG +R+VP+GAGRRK
Sbjct: 69 YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRK 105
>UniRef100_Q948I5 Putative H-protein promoter binding factor-2a [Oryza sativa]
Length = 486
Score = 127 bits (319), Expect = 1e-28
Identities = 53/58 (91%), Positives = 56/58 (96%)
Query: 46 KKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 103
KKPDKI+PCPRC SM+TKFCYFNNYNVNQPRHFCK CQRYWTAGGA+RNVPVGAGRRK
Sbjct: 138 KKPDKILPCPRCSSMDTKFCYFNNYNVNQPRHFCKHCQRYWTAGGAMRNVPVGAGRRK 195
>UniRef100_Q93ZL5 Dof zinc finger protein DOF5.2 [Arabidopsis thaliana]
Length = 457
Score = 127 bits (319), Expect = 1e-28
Identities = 56/79 (70%), Positives = 63/79 (78%), Gaps = 3/79 (3%)
Query: 28 TRERSEDKKGSGEERDQE---KKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQR 84
T+ +++ G QE KKPDKI+PCPRC SMETKFCY+NNYNVNQPRHFCK CQR
Sbjct: 111 TKAAKTNEESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQR 170
Query: 85 YWTAGGALRNVPVGAGRRK 103
YWTAGG +RNVPVGAGRRK
Sbjct: 171 YWTAGGTMRNVPVGAGRRK 189
>UniRef100_Q8L5E6 Dof zinc finger protein [Hordeum vulgare]
Length = 270
Score = 127 bits (318), Expect = 1e-28
Identities = 51/60 (85%), Positives = 57/60 (95%)
Query: 46 KKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMR 105
KKPDKI+PCPRC SM+TKFCY+NNYN+NQPRHFCK CQRYWTAGGA+RNVPVGAGRRK +
Sbjct: 2 KKPDKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSK 61
>UniRef100_Q9SEZ3 Dof zinc finger protein DOF1.10 [Arabidopsis thaliana]
Length = 399
Score = 126 bits (316), Expect = 2e-28
Identities = 57/97 (58%), Positives = 71/97 (72%), Gaps = 2/97 (2%)
Query: 38 SGEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPV 97
SGE+ KKPDK+IPCPRC+S TKFCY+NNYNVNQPR+FC+ CQRYWTAGG++RNVPV
Sbjct: 118 SGEKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPV 177
Query: 98 GAGRRKMR--PSCDELLDGGGSICDASATVEQLGLGT 132
G+GRRK + PS + L CD + + L G+
Sbjct: 178 GSGRRKNKGWPSSNHYLQVTSEDCDNNNSGTILSFGS 214
>UniRef100_Q9SDF4 Similar to H-protein promoter binding factor-2a [Oryza sativa]
Length = 454
Score = 125 bits (313), Expect = 5e-28
Identities = 51/58 (87%), Positives = 56/58 (95%)
Query: 46 KKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 103
KKPDKI+PCPRC SMETKFCYFNNYNV+QPRHFC+ CQRYWTAGGA+RNVPVGAGRR+
Sbjct: 72 KKPDKILPCPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVGAGRRR 129
>UniRef100_Q9LQX4 Hypothetical Dof zinc finger protein DOF1.3 [Arabidopsis thaliana]
Length = 366
Score = 124 bits (312), Expect = 7e-28
Identities = 62/110 (56%), Positives = 78/110 (70%), Gaps = 9/110 (8%)
Query: 1 MAQVQSGQDSEGIKLFGTTITLHGGRETRERSEDKKG------SGEERDQE-KKPDKIIP 53
M QS D+ +KL ++ + +ET E S+D+ S EE+ E KKPDKI+P
Sbjct: 49 MMNNQSVTDNTSLKL--SSNLNNESKETSENSDDQHSEITTITSEEEKTTELKKPDKILP 106
Query: 54 CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 103
CPRC S +TKFCY+NNYNVNQPRHFC+ CQRYWTAGG++R VPVG+GRRK
Sbjct: 107 CPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRK 156
>UniRef100_Q8S0I8 PutativeDof zinc finger protein [Oryza sativa]
Length = 205
Score = 120 bits (302), Expect = 1e-26
Identities = 63/119 (52%), Positives = 71/119 (58%), Gaps = 24/119 (20%)
Query: 25 GRETRERSEDKKGSGEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQR 84
G+ T+ R +D S E R P +PCPRC+S +TKFCYFNNYNVNQPRHFCK C R
Sbjct: 82 GQPTQRRLQD---SAEARAAAAAP---LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHR 135
Query: 85 YWTAGGALRNVPVGAGRRKMRPSCDELLDGGGSICDASATVEQLGLGTHREWHEAAAMF 143
YWTAGGALRNVPVGAGRRK RP + L + H H AAA F
Sbjct: 136 YWTAGGALRNVPVGAGRRKNRP------------------LGPLAVAHHNHHHRAAAGF 176
>UniRef100_Q8L5E8 Dof zinc finger protein [Hordeum vulgare]
Length = 217
Score = 120 bits (301), Expect = 1e-26
Identities = 67/171 (39%), Positives = 92/171 (53%), Gaps = 33/171 (19%)
Query: 12 GIKLFGTTITLHGGRE-------------------TRERSEDKKGSGEERDQEKKP---- 48
GIKLFG IT R+ + S +GS E+ ++ +
Sbjct: 6 GIKLFGKVITRQPTRQGTDGGGGGVPSKAQQAPSMSSSSSSSGRGSVEQLEEAARARAAA 65
Query: 49 -DKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMRP- 106
+ +PCPRC+S +TKFCYFNNYNVNQPRHFC+ C RYWTAGGA+RNVPVG+GRRK RP
Sbjct: 66 AEARLPCPRCRSEDTKFCYFNNYNVNQPRHFCRACHRYWTAGGAIRNVPVGSGRRKNRPV 125
Query: 107 --SCDELLDGGGSICDASATVEQLGLGTHRE--WHE----AAAMFHGDFRQ 149
++ + +++ GLG H + W + +A + HG+ Q
Sbjct: 126 LHGASTVISADNPLAGSASQGMVNGLGFHPDYGWSQVVPSSAYLGHGEIEQ 176
>UniRef100_Q677E5 H-protein promoter binding factor [Hyacinthus orientalis]
Length = 84
Score = 112 bits (281), Expect = 3e-24
Identities = 48/61 (78%), Positives = 51/61 (82%), Gaps = 2/61 (3%)
Query: 50 KIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMR--PS 107
+ +PCPRCKS ETKFCYFNNYNVNQPRHFC+ C RYWTAGG LR VPVGAGRRK R P
Sbjct: 7 RCLPCPRCKSKETKFCYFNNYNVNQPRHFCRNCHRYWTAGGTLRRVPVGAGRRKNRTPPP 66
Query: 108 C 108
C
Sbjct: 67 C 67
>UniRef100_Q9SXG7 Dof zinc finger protein [Oryza sativa]
Length = 375
Score = 106 bits (264), Expect = 3e-22
Identities = 45/89 (50%), Positives = 59/89 (65%)
Query: 37 GSGEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP 96
G+G ER + +K + CPRC S TKFCY+NNY++ QPR+FCK C+RYWT GG+LRNVP
Sbjct: 59 GAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVP 118
Query: 97 VGAGRRKMRPSCDELLDGGGSICDASATV 125
VG G RK + S ++ + SA V
Sbjct: 119 VGGGSRKNKRSSSSVVPSAAASASTSAAV 147
>UniRef100_Q8LAP8 Dof zinc finger protein DOF4.6 [Arabidopsis thaliana]
Length = 342
Score = 104 bits (259), Expect = 1e-21
Identities = 45/95 (47%), Positives = 60/95 (62%)
Query: 39 GEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVG 98
G ER + D+ + CPRC S TKFCY+NNY++ QPR+FCKGC+RYWT GG+LRN+PVG
Sbjct: 40 GGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99
Query: 99 AGRRKMRPSCDELLDGGGSICDASATVEQLGLGTH 133
G RK + S D + D++ + L H
Sbjct: 100 GGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSDH 134
>UniRef100_Q9ZSM2 Putative DNA-binding protein [Dendrobium grex Madame Thong-In]
Length = 179
Score = 103 bits (258), Expect = 1e-21
Identities = 42/48 (87%), Positives = 46/48 (95%)
Query: 56 RCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 103
RC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG++RNVPVGAGRRK
Sbjct: 31 RCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGAGRRK 78
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.318 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 310,697,176
Number of Sequences: 2790947
Number of extensions: 13391527
Number of successful extensions: 42840
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 42705
Number of HSP's gapped (non-prelim): 143
length of query: 167
length of database: 848,049,833
effective HSP length: 118
effective length of query: 49
effective length of database: 518,718,087
effective search space: 25417186263
effective search space used: 25417186263
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0399.7