BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0399.4
(1400 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9C739 Copia-type polyprotein, putative [Arabidopsis t... 1106 0.0
UniRef100_Q9SXB2 T28P6.8 protein [Arabidopsis thaliana] 1100 0.0
UniRef100_Q9M2D1 Copia-type polyprotein [Arabidopsis thaliana] 1098 0.0
UniRef100_Q9C536 Copia-type polyprotein, putative [Arabidopsis t... 1091 0.0
UniRef100_Q9M1C6 Hypothetical protein T2O9.150 [Arabidopsis thal... 1000 0.0
UniRef100_Q9SFE1 T26F17.17 [Arabidopsis thaliana] 997 0.0
UniRef100_Q6L3N8 Putative gag-pol polyprotein [Solanum demissum] 967 0.0
UniRef100_Q9FH39 Copia-type polyprotein [Arabidopsis thaliana] 953 0.0
UniRef100_Q9C7Y1 Copia-type polyprotein, putative; 28768-32772 [... 952 0.0
UniRef100_Q9LH44 Copia-like retrotransposable element [Arabidops... 932 0.0
UniRef100_Q7XTU6 OSJNBb0034I13.10 protein [Oryza sativa] 921 0.0
UniRef100_Q9LPK1 F6N18.1 [Arabidopsis thaliana] 916 0.0
UniRef100_Q9M197 Copia-type reverse transcriptase-like protein [... 910 0.0
UniRef100_Q9ZQE9 Putative retroelement pol polyprotein [Arabidop... 906 0.0
UniRef100_Q7Y141 Putative polyprotein [Oryza sativa] 902 0.0
UniRef100_Q8L4X0 Putative pol polyprotein [Oryza sativa] 894 0.0
UniRef100_Q9SHT5 Putative retroelement pol polyprotein [Arabidop... 862 0.0
UniRef100_P10978 Retrovirus-related Pol polyprotein from transpo... 710 0.0
UniRef100_Q84VH8 Gag-pol polyprotein [Glycine max] 699 0.0
UniRef100_Q9ZRJ0 ORF [Nicotiana tabacum] 697 0.0
>UniRef100_Q9C739 Copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 1106 bits (2860), Expect = 0.0
Identities = 584/1292 (45%), Positives = 808/1292 (62%), Gaps = 61/1292 (4%)
Query: 105 AEKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRT 164
A+++KKV+LQT+R +FE LQM+ E ++D+F+R++++TN +K GEK+ D I+EKVLR+
Sbjct: 105 ADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRS 164
Query: 165 LTPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQ-TSKK 223
L KF+H+V IEE+K LE + IE+L GSL+A+E E+ K +Q L Q T ++
Sbjct: 165 LDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYE----EKKKKKEDIIEQVLNMQITKEE 220
Query: 224 GGFS----GKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRK 279
G S G G RG+G+ Y N + ++++ +Q +S RG G + K +
Sbjct: 221 NGQSYQRRGGGQVRGRGRG-GYGNG---RGWRPHEDNTNQRGENSSRGRGKGHPKS---R 273
Query: 280 FDRKKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEG 339
+D+ ++C+NC K GH++SECKAPS + ++AN +E EE + LM ++
Sbjct: 274 YDKSSVKCYNCGKFGHYASECKAPSNK----KFEEKANYVEEK--IQEEDMLLMASYKKD 327
Query: 340 ESNPATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVR 399
E +E H WYLDSG SNHM G K LDE+ + V
Sbjct: 328 EQ--------EENH---------------KWYLDSGASNHMCGRKSMFAELDESVRGNVA 364
Query: 400 FADDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHL 459
D+ + +G G++L++ ++G IS V Y+P MKTN++S+GQLLEK + + +K +L
Sbjct: 365 LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Query: 460 EVFDPNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLK 519
+ D I KVP++ NR F + + +QCL ++ SWLWH RFGHLNF L L
Sbjct: 425 SIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 520 SKDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIG 579
K+MV GL I P++VCE CL+ KQ + F + +R+ L++I++DVCGP + S+G
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLG 544
Query: 580 GNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSN 639
+ YF FID++SRK WVY LK KSEVF +FK FK +K+SG IK +R+D GGE+ S
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604
Query: 640 EMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAV 699
E +CE+NGI ++T P +PQ NGVAER+NRT+L M RSMLK K LP EAV AV
Sbjct: 605 EFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664
Query: 700 YVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIG 759
Y+LN PTKSV + P+ WSGRK V HLR+FG + H H+PD++R KLDDKSE IFIG
Sbjct: 665 YLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724
Query: 760 Y-SSTGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHDDSEGIE 818
Y +++ YKLYNP T + SR++VF+E W + D E
Sbjct: 725 YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPP 784
Query: 819 SAVVDVPGTSQNQNQIQVHNPRPIRTKTLPARFSDYQLIAETEFNSDGDMIHMALLADAN 878
S P TS +QI+ + RT RF Q + E N + ++ L A+
Sbjct: 785 SEEPTTPPTSPTSSQIEESSSE--RT----PRFRSIQELYEVTENQE-NLTLFCLFAECE 837
Query: 879 PVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISVKWVFKVKLNPDGSISK 938
P+ F+EAI+ KTWR AM EE+ SI++N TW+L LP I VKWV+K K N G + +
Sbjct: 838 PMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVER 897
Query: 939 HKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQLDVKSAFLNGPLE 998
+KARLV +G++QR G+DY EVFAPVARLETVR+I++LA+ W + Q+DVKSAFLNG LE
Sbjct: 898 YKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 957
Query: 999 EEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQTGFHKCSVEHGVY 1058
EEVYI QP G+ +KG E KVL+L+KALYGLKQAPRAWN RID + + F KC EH +Y
Sbjct: 958 EEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALY 1017
Query: 1059 VKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGKLSYFLGIEFVQTG 1118
+K +L+ CLYVDDL+ TG++ S + K+ + EFEMTD+G +SY+LGIE Q
Sbjct: 1018 IK-IQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQED 1076
Query: 1119 EGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAEVDSTMFRQLVGCLRFI 1178
GI + Q Y EVLK+F + NP TP+E +KL EE VD T F+ LVG LR++
Sbjct: 1077 NGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYL 1136
Query: 1179 CHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFFPKHLPSQKEDGNLH 1238
+R +I Y VG+VSR+M P +H AAKRILRY+KGT N G+ + +
Sbjct: 1137 TCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY-------STTSDYK 1189
Query: 1239 LVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALSTCEAEYIAACSAACQG 1298
LV Y+DSDW GD DR+ST G+VF+ G +W SKKQ V LSTCEAEY+AA S C
Sbjct: 1190 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHA 1249
Query: 1299 LWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKYHFLRDQVSKEKIK 1358
+W++ LL+EL L +E ++ VDNKSAI LAKNPV H RSKHI+T+YH++R+ VSK+ ++
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309
Query: 1359 LQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
L++ T Q+AD+FTKPLK + F ++ ++ V
Sbjct: 1310 LEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1341
>UniRef100_Q9SXB2 T28P6.8 protein [Arabidopsis thaliana]
Length = 1352
Score = 1100 bits (2846), Expect = 0.0
Identities = 582/1292 (45%), Positives = 804/1292 (62%), Gaps = 61/1292 (4%)
Query: 105 AEKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRT 164
A+++KKV+LQT+R +FE LQM+ E ++D+F+R++++TN +K GEK+ D I+EKVLR+
Sbjct: 105 ADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRS 164
Query: 165 LTPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQ-TSKK 223
L KF+H+V IEE+K LE + IE+L GSL+A+E E+ K +Q L Q T ++
Sbjct: 165 LDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYE----EKKKKKEDIVEQVLNMQITKEE 220
Query: 224 GGFS----GKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRK 279
G S G G RG+G+ Y N + ++++ +Q +S RG G + K +
Sbjct: 221 NGQSYQRRGGGQVRGRGRG-GYGNG---RGWRPHEDNTNQRGENSSRGRGKGHPKS---R 273
Query: 280 FDRKKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEG 339
+D+ ++C+NC K GH++SECKAPS + ++AN +E EE + LM ++
Sbjct: 274 YDKSSVKCYNCGKFGHYASECKAPSNK----KFEEKANYVEEK--IQEEDMLLMASYKKD 327
Query: 340 ESNPATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVR 399
E E H WYLDSG SNHM G K LDE+ + V
Sbjct: 328 EQK--------ENH---------------KWYLDSGASNHMCGRKSMFAELDESVRGNVA 364
Query: 400 FADDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHL 459
D+ + +G G++L++ ++G IS V Y+P MKTN++S+GQLLEK + + +K +L
Sbjct: 365 LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Query: 460 EVFDPNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLK 519
+ D I KVP++ NR F + + +QCL ++ SWLWH RFGHLNF L L
Sbjct: 425 SIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 520 SKDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIG 579
K+MV GL I P++VCE CL+ KQ + F + +R+ L++I++DVCGP + S+G
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544
Query: 580 GNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSN 639
+ YF FID++SRK WVY LK KSEVF +FK FK +K+SG IK +R+D GGE+ S
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604
Query: 640 EMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAV 699
E +CE+NGI ++T P +PQ NGV ER+NRT+L M RSMLK K LP EAV AV
Sbjct: 605 EFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664
Query: 700 YVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIG 759
Y+LN PTKSV + P+ WSGRKP V HLR+FG + H H+PD++R KLDDKSE IFIG
Sbjct: 665 YLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724
Query: 760 Y-SSTGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHDDSEGIE 818
Y +++ YKLYNP T + SR++VF+E W + D E
Sbjct: 725 YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPP 784
Query: 819 SAVVDVPGTSQNQNQIQVHNPRPIRTKTLPARFSDYQLIAETEFNSDGDMIHMALLADAN 878
S P TS +QI+ + RT RF Q + E N + ++ L A+
Sbjct: 785 SEEPTTPPTSPTSSQIEESSSE--RT----PRFRSIQELYEVTENQE-NLTLFCLFAECE 837
Query: 879 PVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISVKWVFKVKLNPDGSISK 938
P+ F++AI+ KTWR AM EE+ SI++N TW+L LP I VKWV+K K N G + +
Sbjct: 838 PMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 897
Query: 939 HKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQLDVKSAFLNGPLE 998
+KARLV +G+ QR G+DY EVFAPVARLETVR+I++LA+ W + Q+DVKSAFLNG LE
Sbjct: 898 YKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 957
Query: 999 EEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQTGFHKCSVEHGVY 1058
EEVYI QP G+ +KG E KVL+L+K LYGLKQAPRAWN RID + + F KC EH +Y
Sbjct: 958 EEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALY 1017
Query: 1059 VKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGKLSYFLGIEFVQTG 1118
+K +L+ CLYVDDL+ TG++ S + K+ + EFEMTD+G +SY+LGIE Q
Sbjct: 1018 IK-IQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQED 1076
Query: 1119 EGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAEVDSTMFRQLVGCLRFI 1178
GI + Q Y EVLK+F + NP TP+E +KL EE VD T F+ LVG LR++
Sbjct: 1077 NGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYL 1136
Query: 1179 CHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFFPKHLPSQKEDGNLH 1238
+R +I Y VG+VSR+M P +H AAKRILRY+KGT N G+ + +
Sbjct: 1137 TCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY-------STTSDYK 1189
Query: 1239 LVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALSTCEAEYIAACSAACQG 1298
LV Y+DSDW GD DR+ST G+VF+ G +W SKKQ V LSTCEAEY+AA S C
Sbjct: 1190 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 1249
Query: 1299 LWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKYHFLRDQVSKEKIK 1358
+W++ LL+EL L +E ++ VDNKSAI LAKNPV H RSKHI+T+YH++R+ VSK+ ++
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309
Query: 1359 LQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
L++ T Q+AD FTKPLK + F ++ ++ V
Sbjct: 1310 LEYVKTHDQVADFFTKPLKRENFIKMRSLLGV 1341
>UniRef100_Q9M2D1 Copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 1098 bits (2841), Expect = 0.0
Identities = 581/1292 (44%), Positives = 804/1292 (61%), Gaps = 61/1292 (4%)
Query: 105 AEKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRT 164
A+++KKV+LQT+R +FE LQM+ E ++D+F+R++++TN +K GEK+ D I+EKVLR+
Sbjct: 105 ADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRS 164
Query: 165 LTPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQ-TSKK 223
L KF+H+V IEE+K LE + IE+L GSL+A+E E+ K +Q L Q T ++
Sbjct: 165 LDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYE----EKKKKKEDIAEQVLNMQITKEE 220
Query: 224 GGFS----GKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRK 279
G S G G RG+G+ Y N + ++++ +Q +S RG G + K +
Sbjct: 221 NGQSYQRRGGGQVRGRGRG-GYGNG---RGWRPHEDNTNQRGENSSRGRGKGHPKS---R 273
Query: 280 FDRKKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEG 339
+D+ ++C+NC K GH++SECKAPS + ++A+ +E EE + LM ++
Sbjct: 274 YDKSSVKCYNCGKFGHYASECKAPSNK----KFEEKAHYVEEK--IQEEDMLLMASYKKD 327
Query: 340 ESNPATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVR 399
E E H WYLDSG SNHM G K LDE+ + V
Sbjct: 328 EQK--------ENH---------------KWYLDSGASNHMCGRKSMFAELDESVRGNVA 364
Query: 400 FADDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHL 459
D+ + +G G++L++ ++G IS V Y+P MKTN++S+GQLLEK + + +K +L
Sbjct: 365 LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Query: 460 EVFDPNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLK 519
+ D I KVP++ NR F + + +QCL ++ SWLWH RFGHLNF L L
Sbjct: 425 SIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 520 SKDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIG 579
K+MV GL I P++VCE CL+ KQ + F + +R+ L++I++DVCGP + S+G
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544
Query: 580 GNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSN 639
+ YF FID++SRK WVY LK KSEVF +FK FK +K+SG IK +R+D GGE+ S
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604
Query: 640 EMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAV 699
E +CE+NGI ++T P +PQ NGV ER+NRT+L M RSMLK K LP EAV AV
Sbjct: 605 EFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664
Query: 700 YVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIG 759
Y+LN PTKSV + P+ WSGRKP V HLR+FG + H H+PD++R KLDDKSE IFIG
Sbjct: 665 YLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724
Query: 760 Y-SSTGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHDDSEGIE 818
Y +++ YKLYNP T + SR++VF+E W + D E
Sbjct: 725 YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPP 784
Query: 819 SAVVDVPGTSQNQNQIQVHNPRPIRTKTLPARFSDYQLIAETEFNSDGDMIHMALLADAN 878
S P TS +QI+ + RT RF Q + E N + ++ L A+
Sbjct: 785 SEEPTTPPTSPTSSQIEESSSE--RT----PRFRSIQELYEVTENQE-NLTLFCLFAECE 837
Query: 879 PVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISVKWVFKVKLNPDGSISK 938
P+ F++AI+ KTWR AM EE+ SI++N TW+L LP I VKWV+K K N G + +
Sbjct: 838 PMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 897
Query: 939 HKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQLDVKSAFLNGPLE 998
+KARLV +G+ QR G+DY EVFAPVARLETVR+I++LA+ W + Q+DVKSAFLNG LE
Sbjct: 898 YKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 957
Query: 999 EEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQTGFHKCSVEHGVY 1058
EEVYI QP G+ +KG E KVL+L+K LYGLKQAPRAWN RID + + F KC EH +Y
Sbjct: 958 EEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALY 1017
Query: 1059 VKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGKLSYFLGIEFVQTG 1118
+K +L+ CLYVDDL+ TG++ S + K+ + EFEMTD+G +SY+LGIE Q
Sbjct: 1018 IK-IQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQED 1076
Query: 1119 EGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAEVDSTMFRQLVGCLRFI 1178
GI + Q Y EVLK+F + NP TP+E +KL EE VD T F+ LVG LR++
Sbjct: 1077 NGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYL 1136
Query: 1179 CHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFFPKHLPSQKEDGNLH 1238
+R +I Y VG+VSR+M P +H AAKRILRY+KGT N G+ + +
Sbjct: 1137 TCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY-------STTSDYK 1189
Query: 1239 LVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALSTCEAEYIAACSAACQG 1298
LV Y+DSDW GD DR+ST G+VF+ G +W SKKQ V LSTCEAEY+AA S C
Sbjct: 1190 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 1249
Query: 1299 LWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKYHFLRDQVSKEKIK 1358
+W++ LL+EL L +E ++ VDNKSAI LAKNPV H RSKHI+T+YH++R+ VSK+ ++
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309
Query: 1359 LQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
L++ T Q+AD FTKPLK + F ++ ++ V
Sbjct: 1310 LEYVKTHDQVADFFTKPLKRENFIKMRSLLGV 1341
>UniRef100_Q9C536 Copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 1091 bits (2821), Expect = 0.0
Identities = 576/1292 (44%), Positives = 793/1292 (60%), Gaps = 93/1292 (7%)
Query: 105 AEKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRT 164
A+++KKV+LQT+R +FE LQM+ E ++D+F+R++++TN +K GEK+ D I+EKVLR+
Sbjct: 105 ADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRS 164
Query: 165 LTPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQ-TSKK 223
L KF+H+V IEE+K LE + IE+L GSL+A+E E+ K +Q L Q T ++
Sbjct: 165 LDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYE----EKKKKKEDIVEQVLNMQITKEE 220
Query: 224 GGFS----GKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRK 279
G S G G RG+G+ Y N + ++++ +Q +S RG G + K +
Sbjct: 221 NGQSYQRRGGGQVRGRGRG-GYGNG---RGWRPHEDNTNQRGENSSRGRGKGHPKS---R 273
Query: 280 FDRKKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEG 339
+D+ ++C+NC K GH++SECKAPS + ++AN +E EE + LM ++
Sbjct: 274 YDKSSVKCYNCGKFGHYASECKAPSNK----KFEEKANYVEEK--IQEEDMLLMASYKKD 327
Query: 340 ESNPATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVR 399
E +E H WYLDSG SNHM G K LDE+ + V
Sbjct: 328 EQ--------EENH---------------KWYLDSGASNHMCGRKSMFAELDESVRGNVA 364
Query: 400 FADDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHL 459
D+ + +G G++L++ ++G IS V Y+P MKTN++S+GQLLEK + + +K +L
Sbjct: 365 LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Query: 460 EVFDPNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLK 519
+ D I KVP++ NR F + + +QCL ++ SWLWH RFGHLNF L L
Sbjct: 425 SIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 520 SKDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIG 579
K+MV GL I P++VCE CL+ KQ + F + +R+ L++I++DVCGP + S+G
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544
Query: 580 GNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSN 639
+ YF FID++SRK WVY LK KSEVF +FK FK +K+SG IK +R+D GGE+ S
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604
Query: 640 EMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAV 699
E +CE+NGI ++T P +PQ NGVAER+NRT+L M RSMLK K LP EAV AV
Sbjct: 605 EFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664
Query: 700 YVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIG 759
Y+LN PTKSV + P+ WSGRKP V HLR+FG + H H+PD++R KLDDKSE IFIG
Sbjct: 665 YLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724
Query: 760 Y-SSTGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHDDSEGIE 818
Y +++ YKLYNP T + SR++VF+E W + D E
Sbjct: 725 YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPP 784
Query: 819 SAVVDVPGTSQNQNQIQVHNPRPIRTKTLPARFSDYQLIAETEFNSDGDMIHMALLADAN 878
S P TS +QI+
Sbjct: 785 SEEPTTPPTSPTSSQIE---------------------------------------EKCE 805
Query: 879 PVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISVKWVFKVKLNPDGSISK 938
P+ F+EAI+ KTWR AM EE+ SI++N TW+L LP I VKWV+K K N G + +
Sbjct: 806 PMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 865
Query: 939 HKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQLDVKSAFLNGPLE 998
+KARLV +G+ QR G+DY EVFAPVARLETVR+I++LA+ W + Q+DVKSAFLNG LE
Sbjct: 866 YKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 925
Query: 999 EEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQTGFHKCSVEHGVY 1058
EEVYI QP G+ +KG E KVL+L+KALYGLKQAPRAWN RID + + F KC EH +Y
Sbjct: 926 EEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALY 985
Query: 1059 VKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGKLSYFLGIEFVQTG 1118
+K +L+ CLYVDDL+ TG++ S + K+ + EFEMTD+G +SY+LGIE Q
Sbjct: 986 IK-IQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQED 1044
Query: 1119 EGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAEVDSTMFRQLVGCLRFI 1178
GI + Q Y EVLK+F + NP TP+E +KL EE VD T F+ LVG LR++
Sbjct: 1045 NGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYL 1104
Query: 1179 CHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFFPKHLPSQKEDGNLH 1238
+R +I Y VG+VSR+M P +H AAKRILRY+KGT N G+ + +
Sbjct: 1105 TCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY-------STTSDYK 1157
Query: 1239 LVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALSTCEAEYIAACSAACQG 1298
LV Y+DSDW GD DR+ST G+VF+ G +W SKKQ V LSTCEAEY+AA S C
Sbjct: 1158 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 1217
Query: 1299 LWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKYHFLRDQVSKEKIK 1358
+W++ LL+EL L +E ++ VDNKSAI LAKNPV H RSKHI+T+YH++R+ VSK+ ++
Sbjct: 1218 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1277
Query: 1359 LQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
L++ T Q+AD+FTKPLK + F ++ ++ V
Sbjct: 1278 LEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1309
>UniRef100_Q9M1C6 Hypothetical protein T2O9.150 [Arabidopsis thaliana]
Length = 1339
Score = 1000 bits (2586), Expect = 0.0
Identities = 550/1309 (42%), Positives = 782/1309 (59%), Gaps = 108/1309 (8%)
Query: 107 KLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTLT 166
K+K+ +LQ +R++FELL M+ E I F R +++ N MK GE M IV K+LR+LT
Sbjct: 109 KVKRAQLQALRKEFELLAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLT 168
Query: 167 PKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KS--KSTDQALQAQTSKKG 224
PKF++VV +IEES L L I+EL GSL HEQR+ + K T + +Q +G
Sbjct: 169 PKFNYVVCSIEESNDLSTLSIDELHGSLLVHEQRLNGHVQEEQALKVTHEERPSQGRGRG 228
Query: 225 GFSGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRKFDRKK 284
F G G RG+G+ + N R
Sbjct: 229 VFRGSRG-RGRGRGRSGTN--------------------------------------RAI 249
Query: 285 IRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEGESNPA 344
+ C+ C+ +GHF EC AN A+ + EE + LM E+ ++N
Sbjct: 250 VECYKCHNLGHFQYECP---------EWEKNANYAE---LEEEEELLLMAYVEQNQAN-- 295
Query: 345 TCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRFADDR 404
DE W+LDSGCSNHMTG+KEW L+E V+ +D
Sbjct: 296 ----RDE-----------------VWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDT 334
Query: 405 FISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLEVFDP 464
+S G G V VK +G VI EV YVP ++ NL+S+GQL E+ ++ ++ +V+ P
Sbjct: 335 RMSVVGKGSVKVK-VNGVTQVIPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHP 393
Query: 465 NERKIMKVPLTPNRTFQVKLT--AIDSQCLTAE--LEDNSWLWHQRFGHLNFKDLSSLKS 520
++ IM+ ++ NR F + + +S CL E ++ + LWH RFGHLN + L L
Sbjct: 394 SKGAIMETNMSGNRMFFLLASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAH 453
Query: 521 KDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIGG 580
K MV GL +K ++C CL KQ R S T +S+ L +++SD+CGP S G
Sbjct: 454 KKMVIGLPILKATKEICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSG 513
Query: 581 NKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSNE 640
+Y SFID+++RK WVY L KSE F+ FK+FK +K+ G + LRTD GGE+ SNE
Sbjct: 514 KRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNE 573
Query: 641 MSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAVY 700
FC +GI ++TA +TPQ NGVAER+NRT++N VRSML + +P F EA +V+
Sbjct: 574 FGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVH 633
Query: 701 VLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIGY 760
+ N PT +V+ PE WSGRKP V++ R+FGC+ + HIPDQ+R KLDDKS+ +F+G
Sbjct: 634 IQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGV 693
Query: 761 S-STGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDL-DHDD---SE 815
S + A++LY+P ++ S+DVVF+E +W + V + V L+ D DD SE
Sbjct: 694 SEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWDQADV---EAKEVTLECGDEDDEKNSE 750
Query: 816 GIESAVVDVPGTSQNQNQIQVH--------NPRPIRTKTL-----PARFSDYQLIAETEF 862
+E V P + N + P P+ K P +DY+ E
Sbjct: 751 VVEPIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRERRPPGWMADYETGEGEEI 810
Query: 863 NSDGDMIHMALLADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISV 922
+ ++ + ++ +A+P++F++A+K+K WR AM+ E+ SI +N TW+L LP TPI V
Sbjct: 811 EENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIESIVKNNTWELTTLPKGFTPIGV 870
Query: 923 KWVFKVKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWD 982
KWV+K KLN DG + K+KARLV +G+ Q G+DY+EVFAPVARL+TVR I+A++S NW+
Sbjct: 871 KWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWE 930
Query: 983 LWQLDVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTF 1042
++QLDVKSAFL+G L+EEVY+ QP GF +G E KV KLRKALYGLKQAPRAW RI+ +
Sbjct: 931 IFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAY 990
Query: 1043 LSQTGFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTD 1102
+ F +C EH ++ K+ G +L++ LYVDDL+ TGS + K+S+ EFEM+D
Sbjct: 991 FLKEEFERCPSEHTLFTKT-RVGNILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSD 1049
Query: 1103 LGKLSYFLGIEFVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAE 1162
LGK+ +FLGIE Q+ GI + QR+Y EVL RF + N + P+ KL E +
Sbjct: 1050 LGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEK 1109
Query: 1163 VDSTMFRQLVGCLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGV 1222
VD TMF+QLVG L ++ +R ++ YGV L+SRFMS PR SH AAKRILRYLKGT G+
Sbjct: 1110 VDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGI 1169
Query: 1223 FFPKHLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALS 1282
F+ ++++ +L L+A+TDSD+ GD DRRST G+VF I W+SKKQ VALS
Sbjct: 1170 FY-----RRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMASGAICWASKKQPVVALS 1224
Query: 1283 TCEAEYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIE 1342
T EAEYIAA ACQ +W++ +LE+LG + A + DN S I L+K+PV HG+SKHIE
Sbjct: 1225 TTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTIQLSKHPVLHGKSKHIE 1284
Query: 1343 TKYHFLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNVL 1391
++H+LRD V+ + +KL++C T+ Q+AD+FTKPLK ++F+ L+ ++ ++
Sbjct: 1285 VRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQFEKLRALLGMV 1333
>UniRef100_Q9SFE1 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 997 bits (2577), Expect = 0.0
Identities = 551/1291 (42%), Positives = 758/1291 (58%), Gaps = 122/1291 (9%)
Query: 106 EKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTL 165
+++KKV+LQT+R +FE LQM+ E ++D+F+R++++TN +K GEK+ D I+EKVLR+L
Sbjct: 106 DQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSL 165
Query: 166 TPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQ-TSKKG 224
KF+H+V IEE+K LE + IE+L GSL+A+E E+ K +Q L + T ++
Sbjct: 166 DLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYE----EKKKKKEDIVEQVLNMRITKEEN 221
Query: 225 GFS----GKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRKF 280
G S G G RG+G+ GG N +G +
Sbjct: 222 GQSYQRRGGGEVRGRGR------------------------------GGYGNGRGWRPHE 251
Query: 281 DRKKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEGE 340
D N N+ +APS + ++AN +E EE + LM ++ E
Sbjct: 252 D-------NTNQ--------RAPSNK----KFEEKANYVEEK--IQEEDMLLMASYKKDE 290
Query: 341 SNPATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRF 400
+E H WYLDSG SNHM G K LDE+ + V
Sbjct: 291 Q--------EENH---------------KWYLDSGASNHMCGRKSMFAELDESVRGNVAL 327
Query: 401 ADDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLE 460
D+ + +G G++L++ ++G IS V Y+P MKTN++S+GQLLEK + + +K +L
Sbjct: 328 GDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLS 387
Query: 461 VFDPNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLKS 520
+ D I KVP++ NR F + + +QCL ++ SWLWH RFGHLNF L L
Sbjct: 388 IRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSR 447
Query: 521 KDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIGG 580
K+MV GL I P++VCE CL+ KQ + F + +R+ L++I++DVCGP + S+
Sbjct: 448 KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSL-- 505
Query: 581 NKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSNE 640
KSEVF +FK FK +K+SG IK +R+D GGE+ S E
Sbjct: 506 ---------------------EKSEVFKIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKE 544
Query: 641 MSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAVY 700
+CE+NGI ++T P +PQ NGVAER+NRT+L M RSMLK K LP EAV AVY
Sbjct: 545 FLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVY 604
Query: 701 VLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIGY 760
+LN PTKSV + P+ WSGRKP V HLR+FG + H H+PD++R KLDDKSE IFIGY
Sbjct: 605 LLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGY 664
Query: 761 SSTG-AYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHDDSEGIES 819
+ YKLYNP T + SR++VF+E W + D E S
Sbjct: 665 DNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPS 724
Query: 820 AVVDVPGTSQNQNQIQVHNPRPIRTKTLPARFSDYQLIAETEFNSDGDMIHMALLADANP 879
TS +QI+ + RT RF Q + E N + ++ L A+ P
Sbjct: 725 EEPTTRPTSLTSSQIEESSSE--RTP----RFRSIQELYEVTENQE-NLTLFCLFAECEP 777
Query: 880 VKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISVKWVFKVKLNPDGSISKH 939
+ F+EAI+ KTWR AM EE+ SI++N TW+L LP I VKWV+K K N G + ++
Sbjct: 778 MDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERY 837
Query: 940 KARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQLDVKSAFLNGPLEE 999
KARLV +G+ QR G+DY EVFAPVARLETVR+I++LA+ W + Q+D K AFLNG EE
Sbjct: 838 KARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEE 897
Query: 1000 EVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQTGFHKCSVEHGVYV 1059
EVYI QP G+ +KG E KVL+L+KALYGLKQAPRAWN RID + + F KC EH +Y+
Sbjct: 898 EVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYI 957
Query: 1060 KSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGKLSYFLGIEFVQTGE 1119
K +L+ CLYVDDL+ TG++ S + K+ + EFEMTD+G +SY+LGIE Q
Sbjct: 958 K-IQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDN 1016
Query: 1120 GILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAEVDSTMFRQLVGCLRFIC 1179
I + Q Y EVLK+F + NP TP+E +KL EE VD T F+ LVG LR++
Sbjct: 1017 RIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLT 1076
Query: 1180 HSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFFPKHLPSQKEDGNLHL 1239
+R +I Y VG+VSR+M P +H AAKRILRY+KGT N G+ + + L
Sbjct: 1077 CTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY-------STTSDYKL 1129
Query: 1240 VAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALSTCEAEYIAACSAACQGL 1299
V Y+DSDW D DR+ST G+VF+ G +W SKKQ V LSTCEAEY+AA S C +
Sbjct: 1130 VGYSDSDWGRDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAI 1189
Query: 1300 WIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKYHFLRDQVSKEKIKL 1359
W++ LL+EL L +E ++ VDNKSAI LAKNPV H RSKHI+T+YH++R+ VSK+ ++L
Sbjct: 1190 WLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQL 1249
Query: 1360 QHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
++ T Q+AD+FTKPLK + F ++ ++ V
Sbjct: 1250 EYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1280
>UniRef100_Q6L3N8 Putative gag-pol polyprotein [Solanum demissum]
Length = 1333
Score = 967 bits (2501), Expect = 0.0
Identities = 541/1298 (41%), Positives = 763/1298 (58%), Gaps = 88/1298 (6%)
Query: 106 EKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTL 165
+K+ VKLQT+RR FE L M NES+ + +R ++ N M++ GEK+ +Q +V KVLR+L
Sbjct: 101 DKVITVKLQTLRRDFETLFMNENESVQGYLSRTSAIVNRMRSYGEKIDNQIVVSKVLRSL 160
Query: 166 TPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQTSKKGG 225
T KF+HVV AIEESK L +EL SL AHE R+ RS + K ++A Q
Sbjct: 161 TTKFEHVVTAIEESKDLSTYSFDELMSSLLAHEDRL-NRS--REKVQEKAFQV------- 210
Query: 226 FSGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRKFDRKKI 285
KG + KGK+++ + F+ + R G G + G+ + + I
Sbjct: 211 ---KGEFSYKGKAENSAGRGHGRGNFRGR---------GRGGSGRGRNQVGEFRQYKSNI 258
Query: 286 RCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEGESNPAT 345
+C C K GH +C + DE K+ + T V EE + A+
Sbjct: 259 QCRYCKKFGHKEVDCWT--------KQKDEQ---KDANFTQN-------VEEESKLFMAS 300
Query: 346 CNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRFADDRF 405
IT+ + W++DSGCSNHM+ +K +LDE++KS VR DD+
Sbjct: 301 SQITESANAV--------------WFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQ 346
Query: 406 ISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLEVFDPN 465
+ EG G V +K G + +V YVP + NL+S+GQL+ +S+ ++ D
Sbjct: 347 VHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKE 406
Query: 466 E-RKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLKSKDMV 524
R I +VP+T N+ F + ++ + + L + ++ + LWH R+GHLN L L KDMV
Sbjct: 407 SGRTIARVPMTQNKMFPLDISNVGNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMV 466
Query: 525 HGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIGGNKYF 584
GL IK +CE C+ KQ R F R+T L+++++D+CGP + S+GG++YF
Sbjct: 467 IGLPNIK-ELDLCEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYF 525
Query: 585 ASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSNEMSNF 644
F D+YSR WVY LK KSE F FK FK + QSG IK LRTD GGE+ SN+ + F
Sbjct: 526 LMFTDDYSRFSWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLF 585
Query: 645 CEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAVYVLNL 704
CEENGI E+TAPYTP+ NGVAER+NRTV+ M RS LK K LP F GEAV T VY LN+
Sbjct: 586 CEENGIRRELTAPYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNI 645
Query: 705 CPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIGYS-ST 763
PTK V + P W+G+KP V HLRIFGC+ + + KLD+KS IF+GYS +
Sbjct: 646 SPTKDVWNTTPLEAWNGKKPRVSHLRIFGCIAYALV--NFHSKLDEKSTKCIFVGYSLQS 703
Query: 764 GAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHDDSEGIESAVVD 823
AY+LYNP + +V SR+VVF E +W N N+ L D E + VD
Sbjct: 704 KAYRLYNPISGKVIISRNVVFNEDVSWN------FNSGNMMSNIQLLPTDEE----SAVD 753
Query: 824 VPGTSQNQNQIQVHNPRPIRTKT-----------LPARFSDYQLIAETEFNSDGDMIHMA 872
G S N + + PI T +P R S + ++++ +
Sbjct: 754 F-GNSPNSSPVSSSVSSPIAPSTTVAPDESSVEPIPLRRSTREKKPNPKYSNTVNTSCQF 812
Query: 873 LLADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISVKWVFKVKLNP 932
L ++P+ +EEA++ W+ AM EE+ +IERN TW+LVD P K I +KWVF+ K N
Sbjct: 813 ALLVSDPICYEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYNA 872
Query: 933 DGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQLDVKSAF 992
DGSI KHKARLV +G+ Q+ G+D+ E F+PVAR ETVR+++ALA+ + ++Q DVKSAF
Sbjct: 873 DGSIQKHKARLVAKGYSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAF 932
Query: 993 LNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQTGFHKCS 1052
LNG LEEEVY++QP GF I G+E+KV KLRKALYGLKQAPRAW +ID+F +GF +
Sbjct: 933 LNGDLEEEVYVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSD 992
Query: 1053 VEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGKLSYFLGI 1112
E +Y+K + LL+CLYVDD++ GSS S + K ++ FEM+DLG L YFLG+
Sbjct: 993 NEPTLYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGL 1052
Query: 1113 EFVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAEVDSTMFRQLV 1172
E +Q +GI + Q+KY ++LK+F +++C A TP+ N KL + + + +FR LV
Sbjct: 1053 EVIQDKDGIFISQKKYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLV 1112
Query: 1173 GCLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFFPKHLPSQK 1232
G L ++ H+R +I++ V +VSRF+ P + H AAKR+LRY+ GT + G+++ K
Sbjct: 1113 GGLNYLTHTRPDIAFSVSVVSRFLQSPTKQHFGAAKRVLRYVAGTTDFGIWYSK------ 1166
Query: 1233 EDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALSTCEAEYIAAC 1292
N LV +TDSD+ G DR+ST G F FG ++WSSKKQ VALST EAEY AA
Sbjct: 1167 -APNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSGVVTWSSKKQETVALSTSEAEYTAAS 1225
Query: 1293 SAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKYHFLRDQV 1352
AA Q LW++ LLE+ + E+ ++ D+KSAI +AKNP HGR+KHI+ +YHF+R V
Sbjct: 1226 LAARQALWLRKLLEDFSYEQKESTEIFSDSKSAIAMAKNPSFHGRTKHIDVQYHFIRTLV 1285
Query: 1353 SKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
+ +I L+ C T+ Q AD+FTK L + + + + V
Sbjct: 1286 ADGRIVLKFCSTNEQAADIFTKSLPQAKHEYFRLQLGV 1323
>UniRef100_Q9FH39 Copia-type polyprotein [Arabidopsis thaliana]
Length = 1334
Score = 953 bits (2463), Expect = 0.0
Identities = 535/1315 (40%), Positives = 765/1315 (57%), Gaps = 119/1315 (9%)
Query: 106 EKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTL 165
++++ +LQ +RR FE+L+M+ E+I +F+R++ +TN M+ GE M D +VEK+LRTL
Sbjct: 104 DRVQSAQLQRLRRSFEVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTL 163
Query: 166 TPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQTS-KKG 224
KF +VV AIEES ++ L ++ LQ SL HEQ + ++ L+A+T +
Sbjct: 164 VEKFTYVVCAIEESNNIKELTVDGLQSSLMVHEQNLSRHDV-----EERVLKAETQWRPD 218
Query: 225 GFSGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKG-GKRKFDRK 283
G G+GG S RG G Y+G G+ +R
Sbjct: 219 GGRGRGG-------------------------------SPSRGRGRGGYQGRGRGYVNRD 247
Query: 284 KIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEGESNP 343
+ CF C+K+GH+ +EC + EAN + EE + LM E+
Sbjct: 248 TVECFKCHKMGHYKAECPS---------WEKEANY-----VEMEEDLLLMAHVEQ----- 288
Query: 344 ATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRFADD 403
I DEE W+LDSGCSNHM G +EW + LD K VR DD
Sbjct: 289 ----IGDEEKQI--------------WFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDD 330
Query: 404 RFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLEVFD 463
R ++ EG G + ++ DG+ VIS+V +VPG+K NL S+GQL +K ++ EV+
Sbjct: 331 RRMAVEGKGKLRLE-VDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWH 389
Query: 464 PNERK-IMKVPLTPNRTFQVKLTAI-------DSQCLTAELEDNSWLWHQRFGHLNFKDL 515
E++ +M +T NR F V A+ +++CL + N+ +WH+RFGHLN + L
Sbjct: 390 KTEKRMVMHSTMTKNRMFVV-FAAVKKSKETEETRCLQVIGKANN-MWHKRFGHLNHQGL 447
Query: 516 SSLKSKDMVHGLSQIKLPSK--VCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPF 573
SL K+MV GL + L + VC+ CL KQ R + +ST VL ++++D+CGP
Sbjct: 448 RSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPI 507
Query: 574 ETASIGGNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEG 633
AS G +Y +FID++SRK W YLL KSE F FK FK +++SG+ + LR+D G
Sbjct: 508 NPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRG 567
Query: 634 GEYCSNEMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGE 693
GEY S E +C+E GI ++TA YTPQ NGVAER+NR+V+NM R ML S+P +F E
Sbjct: 568 GEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPE 627
Query: 694 AVMTAVYVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSE 753
AV AVY+LN P+K+++ PE WS KPSV+HLRIFG L + +P Q+R KLD+KS
Sbjct: 628 AVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSI 687
Query: 754 TMIFIGYS-STGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHD 812
+ G S + AY+LY+P T ++ SRDV F+E W+ E + + + N D +
Sbjct: 688 KCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEW-EDKSLEEELVWDNSDHEPA 746
Query: 813 DSEGIE---SAVVDVPGTSQNQNQI--QVHNPRP------IRTKTLPARFSDY------Q 855
EG E + D T + + + VH P +R + P DY
Sbjct: 747 GEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARV 806
Query: 856 LIAETEFNSDGDMIHMALLADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPA 915
LI + E D + + +PV FEEA + + WR AM+ E+ SIE N TW+LV+LP
Sbjct: 807 LITQDE----EDEVLALFIGPGDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPE 862
Query: 916 NKTPISVKWVFKVKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVAL 975
I +KW+FK K N G + K KARLV +G+ QR G+D+ EVFAPVA+ +T+R+I+ L
Sbjct: 863 EAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGL 922
Query: 976 ASWKNWDLWQLDVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAW 1035
A+ K W ++QLDVKSAFL+G L+E+V++ QP GFE++ KV KL+KALYGLKQAPRAW
Sbjct: 923 AAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAW 982
Query: 1036 NKRIDTFLSQTGFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLN 1095
RI+ F + GF KC EH ++VK + L++ +YVDDL+ TGSS I+ K S+
Sbjct: 983 YSRIEEFFGKEGFEKCYCEHTLFVKK-ERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMM 1041
Query: 1096 NEFEMTDLGKLSYFLGIEFVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLG 1155
EF MTDLGK+ YFLG+E +Q GI ++QRKY E++K++ + CN + P+ KL
Sbjct: 1042 EEFAMTDLGKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLT 1101
Query: 1156 LCEEEAEVDSTMFRQLVGCLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLK 1215
VD T F+QL+G LR++ +R ++ + V LVSR+M P + HL A KRILRY++
Sbjct: 1102 KAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQ 1161
Query: 1216 GTPNHGVFFPKHLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKK 1275
GT + G+ + + G LV + DSD+ GD DR+ST GYVF G I+W+SKK
Sbjct: 1162 GTLDLGIQY-------ERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKK 1214
Query: 1276 QAAVALSTCEAEYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSH 1335
Q V LST EAE+++A ACQ +W++ +LEE+G + + + DN S I L+KNPV H
Sbjct: 1215 QPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLH 1274
Query: 1336 GRSKHIETKYHFLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
GRSKHI +YHFLR+ V + I+L +C T Q+AD+ TK +K + F+ L+ M V
Sbjct: 1275 GRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELRGRMGV 1329
>UniRef100_Q9C7Y1 Copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
Length = 1334
Score = 952 bits (2461), Expect = 0.0
Identities = 535/1315 (40%), Positives = 765/1315 (57%), Gaps = 119/1315 (9%)
Query: 106 EKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTL 165
++++ +LQ +RR FE+L+M+ E+I +F+R++ +TN M+ GE M D +VEK+LRTL
Sbjct: 104 DRVQSAQLQRLRRSFEVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTL 163
Query: 166 TPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQTS-KKG 224
KF +VV AIEES ++ L ++ LQ SL HEQ + ++ L+A+T +
Sbjct: 164 VEKFTYVVCAIEESNNIKELTVDGLQSSLMVHEQNLSRHDV-----EERVLKAETQWRPD 218
Query: 225 GFSGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKG-GKRKFDRK 283
G G+GG S RG G Y+G G+ +R
Sbjct: 219 GGRGRGG-------------------------------SPSRGRGRGGYQGRGRGYVNRD 247
Query: 284 KIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEGESNP 343
+ CF C+K+GH+ +EC + EAN + EE + LM E+
Sbjct: 248 TVECFKCHKMGHYKAECPS---------WEKEANY-----VEMEEDLLLMAHVEQ----- 288
Query: 344 ATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRFADD 403
I DEE W+LDSGCSNHM G +EW + LD K VR DD
Sbjct: 289 ----IGDEEKQI--------------WFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDD 330
Query: 404 RFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLEVFD 463
R ++ EG G + ++ DG+ VIS+V +VPG+K NL S+GQL +K ++ EV+
Sbjct: 331 RRMAVEGKGKLRLE-VDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWH 389
Query: 464 PNERK-IMKVPLTPNRTFQVKLTAI-------DSQCLTAELEDNSWLWHQRFGHLNFKDL 515
E++ +M +T NR F V A+ +++CL + N+ +WH+RFGHLN + L
Sbjct: 390 KTEKRMVMHSTMTKNRMFVV-FAAVKKSKETEETRCLQVIGKANN-MWHKRFGHLNHQGL 447
Query: 516 SSLKSKDMVHGLSQIKLPSK--VCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPF 573
SL K+MV GL + L + VC+ CL KQ R + +ST VL ++++D+CGP
Sbjct: 448 RSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPI 507
Query: 574 ETASIGGNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEG 633
AS G +Y +FID++SRK W YLL KSE F FK FK +++SG+ + LR+D G
Sbjct: 508 NPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRG 567
Query: 634 GEYCSNEMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGE 693
GEY S E +C+E GI ++TA YTPQ NGVAER+NR+V+NM R ML S+P +F E
Sbjct: 568 GEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPE 627
Query: 694 AVMTAVYVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSE 753
AV AVY+LN P+K+++ PE WS KPSV+HLRIFG L + +P Q+R KLD+KS
Sbjct: 628 AVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSI 687
Query: 754 TMIFIGYS-STGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHD 812
+ G S + AY+LY+P T ++ SRDV F+E W+ E + + + N D +
Sbjct: 688 KCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEW-EDKSLEEELVWDNSDHEPA 746
Query: 813 DSEGIE---SAVVDVPGTSQNQNQI--QVHNPRP------IRTKTLPARFSDY------Q 855
EG E + D T + + + VH P +R + P DY
Sbjct: 747 GEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARV 806
Query: 856 LIAETEFNSDGDMIHMALLADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPA 915
LI + E D + + +PV FEEA + + WR AM+ E+ SIE N TW+LV+LP
Sbjct: 807 LITQDE----EDEVLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPE 862
Query: 916 NKTPISVKWVFKVKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVAL 975
I +KW+FK K N G + K KARLV +G+ QR G+D+ EVFAPVA+ +T+R+I+ L
Sbjct: 863 EAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGL 922
Query: 976 ASWKNWDLWQLDVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAW 1035
A+ K W ++QLDVKSAFL+G L+E+V++ QP GFE++ KV KL+KALYGLKQAPRAW
Sbjct: 923 AAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAW 982
Query: 1036 NKRIDTFLSQTGFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLN 1095
RI+ F + GF KC EH ++VK + L++ +YVDDL+ TGSS I+ K S+
Sbjct: 983 YSRIEEFFGKEGFEKCYCEHTLFVKK-ERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMM 1041
Query: 1096 NEFEMTDLGKLSYFLGIEFVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLG 1155
EF MTDLGK+ YFLG+E +Q GI ++QRKY E++K++ + CN + P+ KL
Sbjct: 1042 EEFAMTDLGKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLT 1101
Query: 1156 LCEEEAEVDSTMFRQLVGCLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLK 1215
VD T F+QL+G LR++ +R ++ + V LVSR+M P + HL A KRILRY++
Sbjct: 1102 KAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQ 1161
Query: 1216 GTPNHGVFFPKHLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKK 1275
GT + G+ + + G LV + DSD+ GD DR+ST GYVF G I+W+SKK
Sbjct: 1162 GTLDLGIQY-------ERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKK 1214
Query: 1276 QAAVALSTCEAEYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSH 1335
Q V LST EAE+++A ACQ +W++ +LEE+G + + + DN S I L+KNPV H
Sbjct: 1215 QPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLH 1274
Query: 1336 GRSKHIETKYHFLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
GRSKHI +YHFLR+ V + I+L +C T Q+AD+ TK +K + F+ L+ M V
Sbjct: 1275 GRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELRGRMGV 1329
>UniRef100_Q9LH44 Copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 932 bits (2410), Expect = 0.0
Identities = 512/1287 (39%), Positives = 765/1287 (58%), Gaps = 66/1287 (5%)
Query: 105 AEKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRT 164
+ ++K + LQT+RR++E L+ME E+I DF ++I+L+N ++ GE+ +D +V+K+L +
Sbjct: 103 SSQVKMINLQTLRREYENLKMEEGETINDFTTKLINLSNQLRVHGEEKSDYQVVQKILIS 162
Query: 165 LTPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQTSKKG 224
+ +FD +V +E++K L L + EL G+L+AHE+R+ L+ +G
Sbjct: 163 VPQQFDSIVGVLEQTKDLSTLSVTELIGTLKAHERRL-------------NLREDRINEG 209
Query: 225 GFSG-KGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRKFDRK 283
F+G K G RG+ K ++ + ++ R+ S + +GG ++R
Sbjct: 210 AFNGEKLGSRGENKQNKIRHGKTNMWCGVCKRNNHNEVDCFRKKSESISQRGGS--YER- 266
Query: 284 KIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEGESNP 343
RC+ C+K GH + +CK G + A+L+ E S +E M+ + E
Sbjct: 267 --RCYVCDKQGHIARDCKLRKG--------ERAHLSIEESEDEKEDECHMLFSAVEEKEI 316
Query: 344 ATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRFADD 403
+T EE TW +DSGC+NHM+ + I LD +KK +R +
Sbjct: 317 STIG---EE----------------TWLVDSGCTNHMSKDVRHFIALDRSKKIIIRIGNG 357
Query: 404 RFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLEVFD 463
+ +EG GD+ V G D VI +VLYVP + NL+S+ Q++ + + + + D
Sbjct: 358 GKVVSEGKGDIRVSTNKG-DHVIKDVLYVPELARNLLSVSQMISNGYRVIFEDNKCVIQD 416
Query: 464 PNERKIMKVPLTPNRTFQV--KLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLKSK 521
RKI+ + + +R+F + K + ++ E E+ + LWH+RFGH+N+ + ++++
Sbjct: 417 LKGRKILDIKMK-DRSFPIIWKKSREETYMAFEEKEEQTDLWHKRFGHVNYDKIETMQTL 475
Query: 522 DMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIGGN 581
+V L + ++ +C C + KQ R F + + + L++I+SDVCGP +T SI G+
Sbjct: 476 KIVEKLPKFEVIKGICAACEMGKQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGS 535
Query: 582 KYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSNEM 641
+YF +FID++SR WVY LK KSEV + FK+FK + QS IK LRTD GGE+ S E
Sbjct: 536 RYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYVENQSESRIKRLRTDGGGEFLSREF 595
Query: 642 SNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAVYV 701
C+E+GI HE+T PY+PQ NGVAERRNRT++ M RSM++ K L ++F EA+ T+ Y+
Sbjct: 596 IKLCQESGIHHEITTPYSPQQNGVAERRNRTLVEMARSMIEEKKLSNKFWAEAIATSTYL 655
Query: 702 LNLCPTKSVDSQV-PEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIGY 760
N P+KS++ V P +WSG+KPSV HL++FGC+C+ HIPD++RRKLD K++ IF+GY
Sbjct: 656 QNRLPSKSLEKGVTPMEIWSGKKPSVDHLKVFGCVCYIHIPDEKRRKLDTKAKQGIFVGY 715
Query: 761 SS-TGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHDDSEGIES 819
S+ + Y+++ ++E S+DV F+E W E + V ++ +
Sbjct: 716 SNESKGYRVFLLNEEKIEVSKDVTFDEKKTWSHDEKGERKAILSLVKINSQEQGGGNDLN 775
Query: 820 AVVDVPGTSQNQNQIQ---VHNPRPIRTKTL-PARFSDYQLIAETEFNSDGD-MIH-MAL 873
A +D + NQ I V N +++ P F + + +G+ +IH M L
Sbjct: 776 AHIDQVSNAFNQLHISSRGVQNSHEEGEESVGPRGFRSINNLMDQTNEVEGEALIHEMCL 835
Query: 874 LADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISVKWVFKVKLNPD 933
+ P EEA+K++ W AM+EEL IE+NKTW++V P +K ISVKW+F++K +
Sbjct: 836 MMAEEPQALEEAMKDEKWIEAMREELRMIEKNKTWEVVARPKDKNVISVKWIFRLKTDAS 895
Query: 934 GSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQLDVKSAFL 993
G K KARLV RGF Q G+DY E FAPV+R +T+R I+A+A+ + W L+Q+DVKSAFL
Sbjct: 896 GEAIKRKARLVARGFTQEYGVDYLETFAPVSRYDTIRTIMAIAAQQGWKLFQMDVKSAFL 955
Query: 994 NGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQTGFHKCSV 1053
NG LEEEVYI QPPGF + E KVLKL KALYGLKQAPRAW RID + + GF +
Sbjct: 956 NGDLEEEVYIEQPPGFIEEKEEGKVLKLHKALYGLKQAPRAWYGRIDGYFIKNGFERSIN 1015
Query: 1054 EHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGKLSYFLGIE 1113
+ YVK S +L++ LYVDD+++TGS+ +I+ K + NEFEMTDLG+LSYFLG+E
Sbjct: 1016 DAAFYVKK-TSKEILVVSLYVDDIIVTGSNVKEIERFKEEMKNEFEMTDLGELSYFLGME 1074
Query: 1114 FVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAEVDSTMFRQLVG 1173
Q EGI + Q Y ++LK+F + C TP+ + K+ E D TM+R ++G
Sbjct: 1075 VNQDDEGIFLSQENYAKKLLKKFGMQECKSVSTPLTPHGKIEEVLSEKLEDVTMYRSMIG 1134
Query: 1174 CLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFFPKHLPSQKE 1233
+ ++C SR +I Y +SR+M P + HL AKR+LRY+KGT +G+ F K
Sbjct: 1135 GMLYLCASRPDIMYASSYLSRYMRSPLKQHLQEAKRVLRYVKGTLTYGIHF-------KR 1187
Query: 1234 DGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALSTCEAEYIAACS 1293
LV ++DSDW G D++ST GYVF G W+S KQ VA ST EAEYIA CS
Sbjct: 1188 VEKPELVGFSDSDWAGSVEDKKSTSGYVFTIGSGAFCWNSSKQKTVAQSTAEAEYIAVCS 1247
Query: 1294 AACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKYHFLRDQVS 1353
AA Q +W+Q L+ E+G K ++ +++ DNKSAI + KNPV H R+KHI+ KYHF+R+
Sbjct: 1248 AANQAIWLQRLVNEIGFKAEKGIRIFCDNKSAIAIGKNPVQHRRTKHIDIKYHFVREAQQ 1307
Query: 1354 KEKIKLQHCGTDLQIADVFTKPLKADR 1380
KIKL++C +LQIAD+ TKPL R
Sbjct: 1308 NGKIKLEYCPGELQIADILTKPLNTTR 1334
>UniRef100_Q7XTU6 OSJNBb0034I13.10 protein [Oryza sativa]
Length = 1425
Score = 921 bits (2381), Expect = 0.0
Identities = 518/1325 (39%), Positives = 761/1325 (57%), Gaps = 76/1325 (5%)
Query: 106 EKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTL 165
+++++ K Q RRQFE ++ + E+ +F R+ ++ ++ G M D+ + +K+LR +
Sbjct: 131 DRVREAKEQGFRRQFESMRFKERETPEEFAMRLTAVVADIRDMGGVMEDEHVNKKLLRVV 190
Query: 166 TPKFDHVVVAIEESKKLENLKIEELQGSL---EAHEQRIVERSS*KSKSTDQALQAQTSK 222
K+ V +++E+ ++ + +EEL G L +++ + K T++ QA+ +
Sbjct: 191 PKKYKPVAISLEQLLDVKTMALEELVGRLSTVDSYSDDEEGSNGGKLYLTEEQWQARVKQ 250
Query: 223 KGGF-SGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRG--GGSSNYK----G 275
+ SG G +G+G P + + RG GGS K G
Sbjct: 251 REQEGSGNSGNKGRGA----------------------PGAQNHRGKPGGSPKGKEAATG 288
Query: 276 GKRKFDRKKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMM- 334
D +++CFNC++ GH++ +C+ P R + EANL + EEP LM
Sbjct: 289 ANSSRDISRVKCFNCDEFGHYARQCRKP-----RRQRRGEANLVQAAE---EEPTLLMAH 340
Query: 335 ---VTEEGESNPATCNITDEEHVT---LMMVTKEGGN--YPGTWYLDSGCSNHMTGNKEW 386
V+ GE+ E H+T +++ ++GG G W+LD+G +NHMTG +
Sbjct: 341 VVGVSLAGEATLGRTPSGQEVHLTEKKVILDHEDGGEEEVTGDWFLDTGATNHMTGVRSA 400
Query: 387 LINLDENKKSRVRFADDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLL 446
LD V+F D I +G G V+ + ++G + V Y+P ++ N+IS+G+L
Sbjct: 401 FAELDTGVVGTVKFGDGSVIEIQGRGTVVFRCKNGDHRSLDAVYYIPKLRKNIISVGRLD 460
Query: 447 EKDFSMSMKKRHLEVFDPNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQR 506
+ + + + DPN + KV N + +KL + C+ A D +W WH R
Sbjct: 461 ARGYDAHIWGGVCTLRDPNGLLLAKVKRDINYLYILKLHIANPVCMAASGGDTAWRWHAR 520
Query: 507 FGHLNFKDLSSLKSKDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIY 566
FGHLNF+ L L +MV GL I ++C+ CL KQ R PF R+ L++++
Sbjct: 521 FGHLNFQSLRRLAQGNMVRGLPTIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVH 580
Query: 567 SDVCGPFETASIGGNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIK 626
D+CGP A+ GG KYF +D+ SR MW+ LL K E + K F+ + +SGR ++
Sbjct: 581 GDLCGPITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQAGVELESGRKLR 640
Query: 627 VLRTDEGGEYCSNEMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSL 686
LRTD GGE+ S E ++C + G+ E+TAPY+PQ N V ERRN+TV+ RSMLK L
Sbjct: 641 ALRTDRGGEFTSVEFMDYCTDRGMRRELTAPYSPQQNRVVERRNQTVVAAARSMLKAAGL 700
Query: 687 PHRFCGEAVMTAVYVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRR 746
P RF GEAV+ AVYVLN PTK++D P W GR+PSV+HLR+FGC+ + R
Sbjct: 701 PARFWGEAVVAAVYVLNRSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLR 760
Query: 747 KLDDKSETMIFIGY-SSTGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRV 805
KLDD+ M+FIGY + AY++Y+P +V SRDVVF+E + W ++ +
Sbjct: 761 KLDDRGTRMVFIGYEQGSKAYRMYDPVAQRVCVSRDVVFDETATWAWRDPEDAATEEEEF 820
Query: 806 NLDL----------DHDDSEG---------IESAVVDVPGTSQNQNQIQVHNPRPIRTKT 846
+D D + G + + V+ P + N T
Sbjct: 821 TVDFFVSPVAPSVADAGEQTGTPVQAGVSPVSTGVLSSPPRAPNGEFCTPPTSVTPETDG 880
Query: 847 LPARFSDYQ-LIAETEFNSDGDMIHMALLADANPVKFEEAIKNKTWRLAMKEELASIERN 905
P R+ Q +++ TE D D L+A P F EA K++ WR AM EEL S+E N
Sbjct: 881 GPVRYRRVQDILSTTEPVLDFDYSDQCLIATEEPTSFVEAEKHECWRRAMVEELRSVEEN 940
Query: 906 KTWDLVDLPANKTPISVKWVFKVKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVAR 965
+TW L +LPA I +KWV+K+K +P G+I KHKARLV +G++Q+ G+D+ EVFAPVAR
Sbjct: 941 QTWSLAELPAGHKAIGLKWVYKLKKDPSGAIVKHKARLVAKGYVQQQGVDFDEVFAPVAR 1000
Query: 966 LETVRMIVALASWKNWDLWQLDVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKAL 1025
+ETVR++VALA+ K W++ +DVKSAFLNG LEEEVY+ QPPGF+ K + KVLKLRKAL
Sbjct: 1001 METVRLLVALAAQKGWEIHHMDVKSAFLNGELEEEVYVVQPPGFDDKTNASKVLKLRKAL 1060
Query: 1026 YGLKQAPRAWNKRIDTFLSQTGFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYS 1085
YGL+QAPRAWN ++D L F+K + E VYV+ L++ +YVDDL+ITGS
Sbjct: 1061 YGLRQAPRAWNAKLDNTLLSLKFNKSATESAVYVRGV-GDSKLIVGVYVDDLIITGSQKK 1119
Query: 1086 KIQAVKRSLNNEFEMTDLGKLSYFLGIEFVQTGEGILMHQRKYILEVLKRFNLLSCNPAE 1145
+I A K + F M+DLG LSY+LG+E VQ GEGI + Q Y ++L++ + CNP +
Sbjct: 1120 EIDAFKLQMKQRFNMSDLGFLSYYLGMEVVQKGEGIFLSQSAYAGKILEKTGMEGCNPTQ 1179
Query: 1146 TPVEGNLKLGLCEEEAEVDSTMFRQLVGCLRFICHSRLEISYGVGLVSRFMSCPRQSHLA 1205
P+E LKL VD T +R +VG LR++ ++R +++Y VG VSRFM P H A
Sbjct: 1180 VPMEARLKLSKEGTGECVDPTEYRSIVGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHWA 1239
Query: 1206 AAKRILRYLKGTPNHGVFFPKHLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFG 1265
A K ILRY+ GT G ++ ++E GN LV ++DSD GD DR+ST G +F +G
Sbjct: 1240 AVKHILRYISGTIKTGCWY-----GREEVGNAKLVGFSDSDMAGDLDDRKSTTGVLFRYG 1294
Query: 1266 KAPISWSSKKQAAVALSTCEAEYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSA 1325
+ ISW S+KQ VALS+CEAEYIAA +AACQG+W+ L+ EL LM+DNKSA
Sbjct: 1295 GSLISWQSQKQKVVALSSCEAEYIAATTAACQGIWLSRLIAELLDAEPGQTTLMIDNKSA 1354
Query: 1326 IDLAKNPVSHGRSKHIETKYHFLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLK 1385
I+L KNPV H RSKHI+T+YHF+R+ V K++I +++ ++ Q+AD+ TKP+ RFK L+
Sbjct: 1355 INLCKNPVFHDRSKHIDTRYHFIRECVEKKQIAVEYVCSEDQLADLLTKPVGRVRFKELR 1414
Query: 1386 KMMNV 1390
+ M +
Sbjct: 1415 RKMGL 1419
>UniRef100_Q9LPK1 F6N18.1 [Arabidopsis thaliana]
Length = 1207
Score = 916 bits (2367), Expect = 0.0
Identities = 524/1315 (39%), Positives = 746/1315 (55%), Gaps = 151/1315 (11%)
Query: 106 EKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTL 165
++++ +LQ +RR FE+L+M+ E+I +F+R++ +TN M+ GE M D +VEK+LRTL
Sbjct: 9 DRVQSAQLQRLRRSFEVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTL 68
Query: 166 TPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQTS-KKG 224
KF +VV AIEES ++ L ++ LQ SL HEQ + ++ L+A+T +
Sbjct: 69 VEKFTYVVCAIEESNNIKELTVDGLQSSLMVHEQNLSRHDV-----EERVLKAETQWRPD 123
Query: 225 GFSGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKG-GKRKFDRK 283
G G+GG S RG G Y+G G+ +R
Sbjct: 124 GGRGRGG-------------------------------SPSRGRGRGGYQGRGRGYVNRD 152
Query: 284 KIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEGESNP 343
+ CF C+K+GH+ +EC + EAN + EE + LM E+
Sbjct: 153 TVECFKCHKMGHYKAECPS---------WEKEANY-----VEMEEDLLLMAHVEQ----- 193
Query: 344 ATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRFADD 403
I DEE W+LDSGCSNHM G +EW + LD K VR DD
Sbjct: 194 ----IGDEEKQI--------------WFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDD 235
Query: 404 RFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLEVFD 463
R ++ EG G + ++ DG+ VIS+V +VPG+K NL S+GQL +K ++ EV+
Sbjct: 236 RRMAVEGKGKLRLE-VDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWH 294
Query: 464 PNERK-IMKVPLTPNRTFQVKLTAI-------DSQCLTAELEDNSWLWHQRFGHLNFKDL 515
E++ +M +T NR F V A+ +++CL + N+ +WH+RFGHLN + L
Sbjct: 295 KTEKRMVMHSTMTKNRMFVV-FAAVKKSKETEETRCLQVIGKANN-MWHKRFGHLNHQGL 352
Query: 516 SSLKSKDMVHGLSQIKLPSK--VCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPF 573
SL K+MV GL + L + VC+ CL KQ R + +ST VL ++++D+CGP
Sbjct: 353 RSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPI 412
Query: 574 ETASIGGNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEG 633
AS G +Y +FID++SRK W YLL KSE F FK FK +++SG+ + LR+D G
Sbjct: 413 NPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRG 472
Query: 634 GEYCSNEMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGE 693
GEY S E +C+E GI ++TA YTPQ NGVAER+NR+V+NM R ML S+P +F E
Sbjct: 473 GEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPE 532
Query: 694 AVMTAVYVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSE 753
AV AVY+LN P+K+++ PE WS KPSV+HLRIFG L + +P Q+R KLD+KS
Sbjct: 533 AVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSI 592
Query: 754 TMIFIGYS-STGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHD 812
+ G S + AY+LY+P T ++ SRDV F+E W+ E + + + N D +
Sbjct: 593 KCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEW-EDKSLEEELVWDNSDHEPA 651
Query: 813 DSEGIE---SAVVDVPGTSQNQNQI--QVHNPRP------IRTKTLPARFSDY------Q 855
EG E + D T + + + VH P +R + P DY
Sbjct: 652 GEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARV 711
Query: 856 LIAETEFNSDGDMIHMALLADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPA 915
LI + E D + + +PV FEEA + + WR AM+ E+ SIE N TW+LV+LP
Sbjct: 712 LITQDE----EDEVLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPE 767
Query: 916 NKTPISVKWVFKVKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVAL 975
I +KW+FK K N G + K KARLV +G+ QR G+D+ EVFAPVA+ +T+R+I+ L
Sbjct: 768 EAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGL 827
Query: 976 ASWKNWDLWQLDVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAW 1035
A+ K W ++QLDVKSAFL+G L+E+V++ QP GFE++ KV KL+KALYGLKQAPRAW
Sbjct: 828 AAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAW 887
Query: 1036 NKRIDTFLSQTGFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLN 1095
RI+ F + GF KC EH ++VK + L++ +YVDDL+ TGSS I+ K S+
Sbjct: 888 YSRIEEFFGKEGFEKCYCEHTLFVKK-ERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMM 946
Query: 1096 NEFEMTDLGKLSYFLGIEFVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLG 1155
EF MTDLGK+ YFLG+E +Q GI ++QRKY E++K++ + CN + P+ KL
Sbjct: 947 EEFAMTDLGKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKL- 1005
Query: 1156 LCEEEAEVDSTMFRQLVGCLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLK 1215
G VSR+M P + HL A KRILRY++
Sbjct: 1006 -------------------------------TKAGAVSRYMESPNEQHLLAVKRILRYVQ 1034
Query: 1216 GTPNHGVFFPKHLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKK 1275
GT + G+ + + G LV + DSD+ GD DR+ST GYVF G I+W+SKK
Sbjct: 1035 GTLDLGIQY-------ERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKK 1087
Query: 1276 QAAVALSTCEAEYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSH 1335
Q V LST EAE+++A ACQ +W++ +LEE+G + + + DN S I L+KNPV H
Sbjct: 1088 QPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLH 1147
Query: 1336 GRSKHIETKYHFLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
GRSKHI +YHFLR+ V + I+L +C T Q+AD+ TK +K + F+ L+ M V
Sbjct: 1148 GRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELRGRMGV 1202
>UniRef100_Q9M197 Copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 910 bits (2353), Expect = 0.0
Identities = 490/1126 (43%), Positives = 681/1126 (59%), Gaps = 80/1126 (7%)
Query: 105 AEKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRT 164
A+++KKV+LQT+R +FE LQM+ E ++D+F+R++++TN +K GEK+ D I+EKVLR+
Sbjct: 105 ADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRS 164
Query: 165 LTPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQ-TSKK 223
L KF+H+V IEE+K LE + IE+L GSL+A+E E+ K +Q L Q T ++
Sbjct: 165 LDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYE----EKKKKKEDIVEQVLNMQITKEE 220
Query: 224 GGFS----GKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRK 279
G S G G RG+G+ Y N + ++++ +Q +S RG G + K +
Sbjct: 221 NGQSYQRRGGGQVRGRGRG-GYGNG---RGWRPHEDNTNQRGENSSRGRGKGHPKS---R 273
Query: 280 FDRKKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEG 339
+D+ ++C+NC K GH++SECKAPS + ++AN +E EE + LM ++
Sbjct: 274 YDKSSVKCYNCGKFGHYASECKAPSNK----KFKEKANYVEEK--IQEEDMLLMASYKKD 327
Query: 340 ESNPATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVR 399
E +E H WYLDSG SNHM G K LDE+ + V
Sbjct: 328 EQ--------EENH---------------KWYLDSGASNHMCGRKSMFAELDESVRGNVA 364
Query: 400 FADDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHL 459
D+ + +G G++L++ ++G IS V Y+P MKTN++S+GQLLEK + + +K +L
Sbjct: 365 LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Query: 460 EVFDPNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLK 519
+ D I KVP++ NR F + + +QCL ++ SWLWH RFGHLNF L L
Sbjct: 425 SIRDKESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 520 SKDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIG 579
K+MV GL I P++VCE CL+ Q + F + +R+ L++I++DVCGP + S+G
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544
Query: 580 GNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSN 639
+ YF FID++SRK WVY LK KSEVF +FK FK +K+SG IK +R+D GGE+ S
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSK 604
Query: 640 EMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAV 699
E +CE+NGI ++T P +PQ NGVAER+NRT+L M RSMLK K LP EAV AV
Sbjct: 605 EFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664
Query: 700 YVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIG 759
Y+LN PTKSV + P+ WSGRKP V HLR+FG + H H+PD++R KLDDKSE IFIG
Sbjct: 665 YLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIG 724
Query: 760 Y-SSTGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVNLDLDHDDSEGIE 818
Y +++ YKLYNP T + SR++VF+E W + D E
Sbjct: 725 YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPP 784
Query: 819 SAVVDVPGTSQNQNQIQVHNPRPIRTKTLPARFSDYQLIAETEFNSDGDMIHMALLADAN 878
S P TS +QI+ + RT RF Q + E N + ++ L A+
Sbjct: 785 SEEPTTPPTSPTSSQIEESSSE--RT----PRFRSIQELYEVTENQE-NLTLFCLFAECE 837
Query: 879 PVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISVKWVFKVKLNPDGSISK 938
P+ F+EAI+ KTWR AM EE+ SI++N TW+L LP I VKWV+K K N G + +
Sbjct: 838 PMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 897
Query: 939 HKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQLDVKSAFLNGPLE 998
+KARLV +G+ QR G+DY E+FAPVARLETVR+I++LA+ W + Q+DVKSAFLNG LE
Sbjct: 898 YKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 957
Query: 999 EEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQTGFHKCSVEHGVY 1058
EEVYI QP G+ +KG E KVL+L+K LYGLKQAPRAWN RID + + F KC EH +Y
Sbjct: 958 EEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALY 1017
Query: 1059 VKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGKLSYFLGIEFVQTG 1118
+K +L+ CLYVDDL+ TG++ S + K+ + EFEMTD+G +SY+LGIE Q
Sbjct: 1018 IK-IQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQED 1076
Query: 1119 EGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAEVDSTMFRQLVGCLRFI 1178
GI + Q Y EVLK+F + NP+ LVG LR++
Sbjct: 1077 NGIFITQEGYAKEVLKKFKMDDSNPS--------------------------LVGSLRYL 1110
Query: 1179 CHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFF 1224
+R +I Y VG+VSR+M P +H AAKRILRY+KGT N G+ +
Sbjct: 1111 TCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY 1156
Score = 106 bits (265), Expect = 4e-21
Identities = 47/95 (49%), Positives = 71/95 (74%)
Query: 1296 CQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKYHFLRDQVSKE 1355
C +W++ LL+EL L +E ++ VDNKSAI LAKNPV H RSKHI+T+YH++R+ VSK+
Sbjct: 1167 CHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKK 1226
Query: 1356 KIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
++L++ T Q+AD+FTKPLK + F ++ ++ V
Sbjct: 1227 DVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1261
>UniRef100_Q9ZQE9 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1347
Score = 906 bits (2341), Expect = 0.0
Identities = 503/1305 (38%), Positives = 757/1305 (57%), Gaps = 92/1305 (7%)
Query: 107 KLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTLT 166
+++ VKLQ++RR++E L+M N++I F +++I L + GEK T+ +++K+L +L
Sbjct: 109 QVRLVKLQSLRREYENLKMYDNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLP 168
Query: 167 PKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQTSKKGGF 226
KFD +V +E+++ L+ L + EL G L+A E R+ R +++K+G F
Sbjct: 169 AKFDSIVSVLEQTRDLDALTMSELLGILKAQEARVTARE-------------ESTKEGAF 215
Query: 227 SGKGGYRGKGKSKDYKNSS*KQSQ----FQNQEDHDQPESSSRRGGGSSNYKGGKRKFDR 282
+ R G +D N+ Q + F H + E + N GK K R
Sbjct: 216 YVRSKGRESGFKQDNTNNRVNQDKKWCGFHKSSKHTEEECREK----PKNDDHGKNK--R 269
Query: 283 KKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEGESN 342
I+C+ C KIGH+++EC R + + A++ E NE+ +
Sbjct: 270 SNIKCYKCGKIGHYANEC--------RSKNKERAHVTLEEEDVNEDHMLF---------- 311
Query: 343 PATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRFAD 402
+ ++EE TL W +DSGC+NHMT + + N++++ K +R +
Sbjct: 312 ----SASEEESTTLR---------EDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRN 358
Query: 403 DRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLEVF 462
+ G GD+ V GK + I V VPG++ NL+S+ Q++ + + + + +
Sbjct: 359 GDIVMTAGKGDITVMTRHGKRI-IKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCIIQ 417
Query: 463 DPNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLKSKD 522
D N ++IM + +T +++F++KL++++ + +TA ++ WH+R GH++ K L ++ K+
Sbjct: 418 DANGKEIMNIEMT-DKSFKIKLSSVEEEAMTANVQTEE-TWHKRLGHVSNKRLQQMQDKE 475
Query: 523 MVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIGGNK 582
+V+GL + K+ + C+ C + KQ R F + T++ L+++++DVCGP + SI G++
Sbjct: 476 LVNGLPRFKVTKETCKACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSR 535
Query: 583 YFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSNEMS 642
Y+ F+D+Y+ WVY LK KSE F+ FK FK + +KQS SIK LR M
Sbjct: 536 YYVLFLDDYTHMCWVYFLKQKSETFATFKKFKALVEKQSNCSIKTLRP----------ME 585
Query: 643 NFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAVYVL 702
FCE+ GI +VT PY+PQ NG AER+NR+++ M RSML + LP + EAV T+ Y+
Sbjct: 586 VFCEDEGINRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQ 645
Query: 703 NLCPTKSVDSQV-PEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIGYS 761
N P+K+++ V P W G KP+V HLRIFG +C+ HIPDQ+RRKLD K++ I IGYS
Sbjct: 646 NRLPSKAIEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYS 705
Query: 762 S-TGAYKLYNPRTSQVEFSRDVVFEEHSAW--------KGKETMVVNDSMQ-RVNLDLDH 811
+ T Y+++ +VE SRDVVF+E W K M +ND + R +
Sbjct: 706 NQTKGYRVFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSS 765
Query: 812 DDSEGIESAVVDVPGTSQNQNQIQVHNPRPIRTKTLPARFSDYQLIAETEFNSDGDM--- 868
D I+ + G + + QV++ T P ++ + I E + D
Sbjct: 766 HDLSQIDDHANNGEGETSSHVLSQVNDQEERETSESPKKYKSMKEILEKAPRMENDEAAQ 825
Query: 869 -IHMALLADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISVKWVFK 927
I L+A+ P ++EA +K W AM EE+ IE+N+TW LVD P K ISVKW++K
Sbjct: 826 GIEACLVANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYK 885
Query: 928 VKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQLD 987
+K + G+ KHKARLV RGF Q G+DY E FAPV+R +T+R ++A A+ W L+Q+D
Sbjct: 886 IKTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMD 945
Query: 988 VKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQTG 1047
VKSAFLNG LEEEVY+TQPPGF I+G E KVL+L KALYGLKQAPRAW +RID++ Q G
Sbjct: 946 VKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNG 1005
Query: 1048 FHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGKLS 1107
F + + +Y K VL++ LYVDDL+ITG++ I K+++ +EFEMTDLG L+
Sbjct: 1006 FARSMNDAALYSKK-KGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLN 1064
Query: 1108 YFLGIEFVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPV--EGNLKLGLCEEEAEVDS 1165
YFLG+E Q GI + Q KY +++ +F + TP+ +G K +++ D
Sbjct: 1065 YFLGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADP 1124
Query: 1166 TMFRQLVGCLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFFP 1225
T +R++VG L ++C SR ++ Y +SR+MS P H AKR+LRY+KGT N GV F
Sbjct: 1125 TKYRRIVGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLF- 1183
Query: 1226 KHLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALSTCE 1285
+ KE LV Y+DSDW G D++ST GYVF G A W S KQ VA ST E
Sbjct: 1184 ----TSKE--TPRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAE 1237
Query: 1286 AEYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKY 1345
AEYIA C+A Q +W+Q L E+ GLK E + ++ DNKSAI + +NPV H R+KHIE KY
Sbjct: 1238 AEYIAVCAATNQAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKY 1297
Query: 1346 HFLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
HF+R+ K I+L++C + Q+ADV TK L RF+ L++ + V
Sbjct: 1298 HFVREAEHKGLIQLEYCKGEDQLADVLTKALSVSRFEGLRRKLGV 1342
>UniRef100_Q7Y141 Putative polyprotein [Oryza sativa]
Length = 1335
Score = 902 bits (2331), Expect = 0.0
Identities = 498/1308 (38%), Positives = 746/1308 (56%), Gaps = 98/1308 (7%)
Query: 105 AEKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRT 164
++K+ VKLQT+RRQF+ L M+ +E + D+F+R+I + N M+ GE + DQ +VEK+L +
Sbjct: 101 SQKVLAVKLQTLRRQFQNLLMKESEKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILIS 160
Query: 165 LTPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQA---LQAQTS 221
L K++++V A EESK L + SLE+HE+R ++R ++ Q+ + Q S
Sbjct: 161 LPEKYEYIVAATEESKDLS-------KDSLESHEERKLQREGSSIENAFQSKLSFRPQNS 213
Query: 222 KKGGFSGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRKFD 281
+ G K G+ + + KN +Q + QE ++ SSS
Sbjct: 214 RFRGNFQKNGFPMRDRGYFQKNGFSRQKE-DGQERREKGTSSSNLWCDICQKSSHTTDMC 272
Query: 282 RKKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEGES 341
KK+ C C + GH + C R R + AN ++E E+ E
Sbjct: 273 WKKMTCNKCKRKGHIAKYC--------RTREINRANFSQE--------------KEKSEE 310
Query: 342 NPATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRFA 401
+C+ EE W +DSGC+NHM + +D + +++
Sbjct: 311 MVFSCHTAQEEK-------------DDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHMG 357
Query: 402 DDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLEV 461
+ +EG G V V+ DG I +VL VP +K NL+S+GQLLE +++ + ++
Sbjct: 358 NGSIAQSEGKGTVAVQTADGPKF-IKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKI 416
Query: 462 FD-PNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLKS 520
D N R + K+ + NR F +++ L +E+ D S LWH+R GHLN++ L L++
Sbjct: 417 LDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSEV-DISDLWHKRMGHLNYRALKLLRT 475
Query: 521 KDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIGG 580
K MV GL I L S CE C+ KQ RA F R++A L+++++D+ G T S GG
Sbjct: 476 KGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHADIVGKVPTISEGG 535
Query: 581 NKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSNE 640
N YF +FID+Y+R +WVY LK KS +FK FK M + QS R IKVLR+D+G EY S E
Sbjct: 536 NWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGREYISKE 595
Query: 641 MSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAVY 700
+CE GI ++TA Y+ Q NGVAER+NRT+ +M SML+ K +P F EAV TAVY
Sbjct: 596 FEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAVY 655
Query: 701 VLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIGY 760
+LN PTK+V ++ P W G+KP + H+R+FGC+C+ +P Q+R K D+KS+ IF+GY
Sbjct: 656 ILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGY 715
Query: 761 S-STGAYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSM---QRVNLDLDH----- 811
+ Y+LYN ++ SRD +F+E + W K + + + L H
Sbjct: 716 ADGIKGYRLYNLEKKKIIISRDAIFDESATWNWKSPEASSTPLLPTTTITLGQPHMHGTH 775
Query: 812 ---------DDSEGIESAVVDVPGTSQNQNQIQVHNPRPIRTKTLPARFSDYQLIAETEF 862
S + S+ + ++ QI P R +++ +L+ T
Sbjct: 776 EVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSM------VELLESTSQ 829
Query: 863 NSDGDMIHMALLADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISV 922
+ + P F+EA K+ W AM++E+ IE+N TW+LVD P ++ I V
Sbjct: 830 QRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGV 889
Query: 923 KWVFKVKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWD 982
KWV+K KLNPDGS+ K+KARLV +GF Q+ G+DY E +APVARLET+R I+ALA+ K W
Sbjct: 890 KWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWK 949
Query: 983 LWQLDVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTF 1042
++QLDVKSAFLNG L+EE+Y+ QP GF ++G E+KV +L+KALYGLKQAPRAW +ID +
Sbjct: 950 IYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKY 1009
Query: 1043 LSQTGFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTD 1102
Q GF K E +YV + +L++ LYVDDL+ TG+S +Q K+ + + +EM+D
Sbjct: 1010 FIQKGFAKSISEPTLYVNKTGT-DILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSD 1068
Query: 1103 LGKLSYFLGIEFVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAE 1162
LG L YFLG+E Q+ EGI + QRKY +LK+F + +C TP+ N K + +
Sbjct: 1069 LGLLHYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADK 1128
Query: 1163 VDSTMFRQLVGCLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGV 1222
D T++R LVG L ++ +R +I + L+SR+MS P Q + AAKR+LRY+KGT ++G+
Sbjct: 1129 ADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGI 1188
Query: 1223 FFPKHLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALS 1282
++ S+ L+ YTDSDW G D +ST GY F G A
Sbjct: 1189 WYKPVKESK-------LIGYTDSDWAGCLDDMKSTSGYAFSLGSA--------------- 1226
Query: 1283 TCEAEYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIE 1342
EAEY+AA A Q +W++ ++E+LG K + + D+KSAI +++NPVSH R+KHI
Sbjct: 1227 --EAEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIA 1284
Query: 1343 TKYHFLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
KYH++R+ V ++++KL+ C TD Q+AD+FTK L ++F ++++ V
Sbjct: 1285 IKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRDRELIGV 1332
>UniRef100_Q8L4X0 Putative pol polyprotein [Oryza sativa]
Length = 1426
Score = 894 bits (2309), Expect = 0.0
Identities = 505/1320 (38%), Positives = 755/1320 (56%), Gaps = 65/1320 (4%)
Query: 106 EKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTL 165
+++++ K + RRQFE ++ + E+ +F R+ ++ ++ G M D+ + +K+LR +
Sbjct: 131 DRVREAKEKGFRRQFESMRFKERETPEEFAMRLTAVVADIRDMGGVMEDEHVNKKLLRVV 190
Query: 166 TPKFDHVVVAIEESKKLENLKIEELQGSL---EAHEQRIVERSS*KSKSTDQALQAQTSK 222
K+ V +++E+ ++ + +EEL G L +++ K T++ QA+ +
Sbjct: 191 PKKYKPVAISLEQLLDVKTMALEELVGRLSTVDSYSDDEEGSDGGKLYLTEEQWQARVKQ 250
Query: 223 KGGF-SGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRKFD 281
+ SG G +G+G Q +P S + G G D
Sbjct: 251 REQEGSGNSGNKGRGAPG-------------TQNHRGKPGGSPK---GKEAATGANSSRD 294
Query: 282 RKKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMM----VTE 337
+++CFNC++ GH++ +C+ P R + EANL + EEP LM V+
Sbjct: 295 ISRVKCFNCDEFGHYARQCRKP-----RRQRRGEANLVQAAE---EEPTLLMAHVVGVSL 346
Query: 338 EGESNPATCNITDEEHVT---LMMVTKEGGNYPGT--WYLDSGCSNHMTGNKEWLINLDE 392
GE+ E H+T +++ ++GG T W+LD+G +NHMTG + LD
Sbjct: 347 AGEATLGRTPGGQEVHLTEKKVILDHEDGGEEEVTRDWFLDTGATNHMTGVRSAFAELDT 406
Query: 393 NKKSRVRFADDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSM 452
V+F D I +G G V+ + ++ + V Y+P ++ N+IS+G+L + +
Sbjct: 407 GVVGTVKFGDGSVIEIQGRGTVVFRCKNSDHRSLDTVYYIPKLRKNIISVGRLDARGYDA 466
Query: 453 SMKKRHLEVFDPNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNF 512
+ + DP+ + KV N + +KL + C+ A D +W WH RFGHLNF
Sbjct: 467 HIWGGVCTLRDPDGLLLAKVKRDINYLYILKLHIANPVCMAASGGDMAWRWHARFGHLNF 526
Query: 513 KDLSSLKSKDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGP 572
+ L L +MV GL I ++C+ CL KQ R PF R+ L++++ D+CGP
Sbjct: 527 QSLRRLAQGNMVRGLPIIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGP 586
Query: 573 FETASIGGNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDE 632
A+ GG KYF +D+ SR MW+ LL K E + K F+ + +SGR ++ LRTD
Sbjct: 587 ITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQVGVELESGRKLRALRTDR 646
Query: 633 GGEYCSNEMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCG 692
GGE+ S E ++C ++G+ E+TAPY+PQ NGV ERRN+TV+ RSMLK +P F G
Sbjct: 647 GGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQTVVAAARSMLKAAGMPACFWG 706
Query: 693 EAVMTAVYVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKS 752
EAV+ AVYVLN PTK+++ P W GR+PSV+HLR+FGC+ + RKLDD+
Sbjct: 707 EAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRG 766
Query: 753 ETMIFIGY-SSTGAYKLYNPRTSQVEFSRDVVFEEHS--AWKGKETMVVNDSMQRVNLDL 809
M+FIGY + AY++Y+P +V SRDVVF+E + AW+ ET + V+ +
Sbjct: 767 TRMVFIGYEQGSKAYRMYDPVARRVCVSRDVVFDEAATWAWRDPETEATEEEEFTVDFFV 826
Query: 810 DHDDS---EGIESAVVDVPGTSQNQNQIQVHNPRPI---------------RTKTLPARF 851
+ DS + E A V G + + +P + T P R+
Sbjct: 827 NPVDSVVADLGEQASTPVQGGTYPASTATPPSPPEVPAGVEFCSPPNSVTPGTNEGPIRY 886
Query: 852 SDYQ-LIAETEFNSDGDMIHMALLADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDL 910
Q +++ TE D D LLA P+ EA + WR AM+EEL SIE N+TW
Sbjct: 887 RRVQDILSATEPVLDFDYSDQCLLASEEPMSLAEAEQQLCWRQAMQEELKSIEDNQTWSF 946
Query: 911 VDLPANKTPISVKWVFKVKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVR 970
+LP I +KWV+KVK +P G + KHKARLV +G++Q+ G+D+ EVFAPVAR+ETVR
Sbjct: 947 AELPVGHKAIGLKWVYKVKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVR 1006
Query: 971 MIVALASWKNWDLWQLDVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQ 1030
+++A+A+ K W++ +DVKSAFLNG LEEEVY+ QPPGF KG E +VL+L+KALYGLKQ
Sbjct: 1007 LLIAVAANKGWEIHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQ 1066
Query: 1031 APRAWNKRIDTFLSQTGFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAV 1090
APRAWN ++ L F K E VYV+ S L++ +YVDDL+I+G+ S+I
Sbjct: 1067 APRAWNAKLHNTLISLNFIKSETESAVYVRGTGSSR-LIVGVYVDDLIISGAQASEIDFF 1125
Query: 1091 KRSLNNEFEMTDLGKLSYFLGIEFVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPVEG 1150
K + +F M+DLG LSY+LG+E VQ +G+ + Q Y ++L++ + CN + P+E
Sbjct: 1126 KEEMKKKFRMSDLGLLSYYLGMEVVQKDDGVFLSQTAYAAKILEKTGMEGCNSTQVPMEA 1185
Query: 1151 NLKLGLCEEEAEVDSTMFRQLVGCLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRI 1210
LKL VDSTM+R VG LR++ ++R +++Y VG VSRFM P H AA K I
Sbjct: 1186 RLKLKRESGGEGVDSTMYRSTVGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHI 1245
Query: 1211 LRYLKGTPNHGVFFPKHLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPIS 1270
LRY+ GT + G +F ++E G L L+ ++DSD GD DR+ST G ++ G + IS
Sbjct: 1246 LRYIAGTLDVGCWF-----GRREKGELRLIGFSDSDMAGDLDDRKSTTGVLYMLGDSLIS 1300
Query: 1271 WSSKKQAAVALSTCEAEYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAK 1330
W S+KQ VALS+CEAEYIAA + ACQG+W+ LL EL + + VDNKSAI+L K
Sbjct: 1301 WQSQKQKVVALSSCEAEYIAATTGACQGIWLNRLLAELLGEDPGQTVMKVDNKSAINLCK 1360
Query: 1331 NPVSHGRSKHIETKYHFLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
NPV H RSKHI+T++HF+R+ V K++I +++ T+ Q+AD+ TKP+ RF L+K M +
Sbjct: 1361 NPVLHDRSKHIDTRFHFIRECVEKKQIAVEYVRTEDQLADILTKPVGRVRFLELRKKMGL 1420
>UniRef100_Q9SHT5 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1307
Score = 862 bits (2226), Expect = 0.0
Identities = 476/1304 (36%), Positives = 746/1304 (56%), Gaps = 100/1304 (7%)
Query: 105 AEKLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRT 164
AE++K+ KLQT+ +F+ L M+ NE+I +F RI ++ ++ GE++ + IV+K L++
Sbjct: 63 AERVKEAKLQTLMAEFDRLNMKDNETIDEFVGRISEISTKSESLGEEIEESKIVKKFLKS 122
Query: 165 LT-PKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQTSKK 223
L K+ H++ A+E+ L E++ G ++ +E R+ + +Q + +
Sbjct: 123 LPRKKYIHIIAALEQILDLNTTGFEDIVGRMKTYEDRVCDEDD---SPEEQGKLMYANSE 179
Query: 224 GGFSGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRKFDRK 283
+ +GG RG+G+ + SS RG G Y+ + D+
Sbjct: 180 SSYDTRGG-RGRGRGR-----------------------SSGRGRGGYGYQ----QRDKS 211
Query: 284 KIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPVTLMMVTEEGESNP 343
K+ C+ C+K GH++SEC + + + N +++ + +M+ E N
Sbjct: 212 KVICYRCDKTGHYASECLDRLLKLIKAQEQQQNN-------EDDDEIESLMMHEVVYLNE 264
Query: 344 ATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRFADD 403
+ + E + +WYLD+G SNHMTGN +W L+E +VRF DD
Sbjct: 265 RSVKPKEFEACS-----------DNSWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDD 313
Query: 404 RFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLEVFD 463
I +G G +++ + G +++V ++P +K+N+IS+GQ E + MK L + D
Sbjct: 314 SRIDIKGKGSIVLITKGGIRKTLTDVYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHD 373
Query: 464 PNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDNSWLWHQRFGHLNFKDLSSLKSKDM 523
+++ + NR ++V L + +CL E +++ K++
Sbjct: 374 REGCLLLRATRSRNRLYKVDLNVENVKCLQLEA-------------------ATMVRKEL 414
Query: 524 VHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIGGNKY 583
V G+S I + C +CL+ KQ R PF T R++ VL++++ D+CGP ++ +Y
Sbjct: 415 VIGISNIPKEKETCGSCLLGKQARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRY 474
Query: 584 FASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSNEMSN 643
ID+++R MW LLK KSE F F+ FKT +++SG IK RTD+GGE+ S E +
Sbjct: 475 ILVLIDDHTRYMWSMLLKEKSEAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQD 534
Query: 644 FCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAVYVLN 703
FC + GI +TAPYTPQ NGV ERRNRT+L M RS+LK +P+ GEAV + Y++N
Sbjct: 535 FCAKEGINRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIIN 594
Query: 704 LCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIGYS-S 762
T+S+ +Q P V+ RKP+V+HLR+FGC+ + I RKLDD+S+ ++++G
Sbjct: 595 RVGTRSLQNQTPYEVFKQRKPNVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPG 654
Query: 763 TGAYKLYNPRTSQV-------EFSRDV---------VFEEHSAWKGKETMVVNDSMQRVN 806
+ AY+L +P ++ +RD+ F + + + + + N
Sbjct: 655 SKAYRLLDPTNRKIIKWNNSDSETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESEN 714
Query: 807 LDLDHDDSEGIESAVVDVPGTSQNQNQIQVHNPRPIRTKTLPARFSDYQLIAETEFNSDG 866
+ ++E E +D T + R R P DY L+AE E G
Sbjct: 715 SHEEEGENEHNEQEQIDAEETQPSHATPLPTLRRSTRQVGKPNYLDDYVLMAEIE----G 770
Query: 867 DMIHMALLADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLPANKTPISVKWVF 926
+ + +A+ + P F+EA K K WR A KEE+ SIE+NKTW L+DLP + I +KWVF
Sbjct: 771 EQVLLAI--NDEPWDFKEANKLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVF 828
Query: 927 KVKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQL 986
K+K N DGSI+K+KARLV +G++QR G+DY EVFA VAR+ET+R+I+ALA+ W++ L
Sbjct: 829 KIKRNSDGSINKYKARLVAKGYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHL 888
Query: 987 DVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQT 1046
DVK+AFL+G L E+VY+TQP GF K +E KV KL KALYGLKQAPRAWN +++ L +
Sbjct: 889 DVKTAFLHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQEL 948
Query: 1047 GFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGKL 1106
F KCS E VY + + +L++ +YVDDLL+TGSS I K+ + +FEM+DLG+L
Sbjct: 949 NFVKCSKEPSVYRRQ-EEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQL 1007
Query: 1107 SYFLGIEFVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKLGLCEEEAEVDST 1166
+Y+LGIE + GI++ Q +Y +++++ + +CNP P+ L+L +EE +
Sbjct: 1008 TYYLGIEVLHRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITER 1067
Query: 1167 MFRQLVGCLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFFPK 1226
+R+++GCLR+I H+R ++SY VG++SR++ PR+SH A K++LRYLKGT +HG++ +
Sbjct: 1068 DYRRMIGCLRYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKR 1127
Query: 1227 HLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKKQAAVALSTCEA 1286
S LV Y+DS D D +ST G++F+ + PI+W S+KQ VALS+CEA
Sbjct: 1128 GFKS-------GLVGYSDSSHSADLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEA 1180
Query: 1287 EYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKYH 1346
E++AA AA Q +W+Q L E+ T E V + VDNKSAI L KN V HGRSKHI +YH
Sbjct: 1181 EFMAATEAAKQAIWLQDLFAEVCGTTSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYH 1240
Query: 1347 FLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNV 1390
F+R+ V +++ H Q AD+ TKPL +F+ +++++ V
Sbjct: 1241 FIRECVENNLVEVDHVPGVEQRADILTKPLGRIKFREMRELVGV 1284
>UniRef100_P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Contains: Protease (EC 3.4.23.-); Reverse transcriptase
(EC 2.7.7.49); Endonuclease] [Nicotiana tabacum]
Length = 1328
Score = 710 bits (1833), Expect = 0.0
Identities = 447/1341 (33%), Positives = 697/1341 (51%), Gaps = 118/1341 (8%)
Query: 85 SSELYRGMEDPEEEQ*RCSRAEKLKKVKLQT----MRRQFELLQMETNESIADFFNRIIS 140
S ++ + D + + +R E L K T +++Q L M + N
Sbjct: 68 SDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNG 127
Query: 141 LTNLMKACGEKMTDQAIVEKVLRTLTPKFDHVVVAIEESKKLENLKIEELQGSLEAHEQR 200
L + G K+ ++ +L +L +D++ I K ++++++ +L +E
Sbjct: 128 LITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKT--TIELKDVTSALLLNE-- 183
Query: 201 IVERSS*KSKSTDQALQAQTSKKGGFSGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQP 260
+ K ++ QAL + G+ + Y+ SS
Sbjct: 184 ---KMRKKPENQGQALITE----------------GRGRSYQRSS--------------- 209
Query: 261 ESSSRRGGGSSNYKGGKRKFDRKKIR-CFNCNKIGHFSSECKAPSGGDTRGRTSDEANLA 319
G S +G + + ++R C+NCN+ GHF +C P G +G TS + N
Sbjct: 210 -----NNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKG--KGETSGQKNDD 262
Query: 320 KEGSITNEEPVTLMMVTEEGESNPATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNH 379
++ ++ + EE EE + L E W +D+ S+H
Sbjct: 263 NTAAMVQNNDNVVLFINEE------------EECMHLSGPESE-------WVVDTAASHH 303
Query: 380 MTGNKEWLINLDENKKSRVRFADDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNL 439
T ++ V+ + + GIGD+ +K G +V+ +V +VP ++ NL
Sbjct: 304 ATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNL 363
Query: 440 ISMGQLLEKDFSMSMKKRHLEVFDPNERKIMKVPLTPNRTFQVKLTAIDSQCLTAELEDN 499
IS G L++D S I K + ++ + A+ E +
Sbjct: 364 IS-GIALDRDGYESYFANQKWRLTKGSLVIAK-GVARGTLYRTNAEICQGELNAAQDEIS 421
Query: 500 SWLWHQRFGHLNFKDLSSLKSKDMVHGLSQIKLPSKVCENCLVSKQPRAPFSSFTPTRST 559
LWH+R GH++ K L L K ++ + K C+ CL KQ R F + + R
Sbjct: 422 VDLWHKRMGHMSEKGLQILAKKSLISYAKGTTV--KPCDYCLFGKQHRVSFQT-SSERKL 478
Query: 560 AVLDVIYSDVCGPFETASIGGNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKK 619
+LD++YSDVCGP E S+GGNKYF +FID+ SRK+WVY+LKTK +VF VF+ F + ++
Sbjct: 479 NILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVER 538
Query: 620 QSGRSIKVLRTDEGGEYCSNEMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRS 679
++GR +K LR+D GGEY S E +C +GI HE T P TPQHNGVAER NRT++ VRS
Sbjct: 539 ETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRS 598
Query: 680 MLKGKSLPHRFCGEAVMTAVYVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKH 739
ML+ LP F GEAV TA Y++N P+ + ++PE VW+ ++ S HL++FGC H
Sbjct: 599 MLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAH 658
Query: 740 IPDQRRRKLDDKSETMIFIGYSSTG-AYKLYNPRTSQVEFSRDVVFEEHS-------AWK 791
+P ++R KLDDKS IFIGY Y+L++P +V SRDVVF E + K
Sbjct: 659 VPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEK 718
Query: 792 GKETMVVN--------DSMQRVNLDLDHDDSEGIESAVVDVPGTSQNQNQIQVHNPRPIR 843
K ++ N ++ D +G + V G ++ +V +P
Sbjct: 719 VKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGE 778
Query: 844 TKTLPARFSDYQLIAETEFNSDGDMIHMALLADANPVKFEEAI----KNKTWRLAMKEEL 899
+ P R S+ + + S ++ + D P +E + KN+ + AM+EE+
Sbjct: 779 EQHQPLRRSERPRVESRRYPSTE---YVLISDDREPESLKEVLSHPEKNQLMK-AMQEEM 834
Query: 900 ASIERNKTWDLVDLPANKTPISVKWVFKVKLNPDGSISKHKARLVVRGFMQRGGLDYSEV 959
S+++N T+ LV+LP K P+ KWVFK+K + D + ++KARLVV+GF Q+ G+D+ E+
Sbjct: 835 ESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEI 894
Query: 960 FAPVARLETVRMIVALASWKNWDLWQLDVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVL 1019
F+PV ++ ++R I++LA+ + ++ QLDVK+AFL+G LEEE+Y+ QP GFE+ G +H V
Sbjct: 895 FSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVC 954
Query: 1020 KLRKALYGLKQAPRAWNKRIDTFLSQTGFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLI 1079
KL K+LYGLKQAPR W + D+F+ + K + VY K ++L LYVDD+LI
Sbjct: 955 KLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLI 1014
Query: 1080 TGSSYSKIQAVKRSLNNEFEMTDLGKLSYFLGIEFV--QTGEGILMHQRKYILEVLKRFN 1137
G I +K L+ F+M DLG LG++ V +T + + Q KYI VL+RFN
Sbjct: 1015 VGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFN 1074
Query: 1138 LLSCNPAETPVEGNLKLG--LC----EEEAEVDSTMFRQLVGCLRF--ICHSRLEISYGV 1189
+ + P TP+ G+LKL +C EE+ + + VG L + +C +R +I++ V
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVC-TRPDIAHAV 1133
Query: 1190 GLVSRFMSCPRQSHLAAAKRILRYLKGTPNHGVFFPKHLPSQKEDGNLHLVAYTDSDWCG 1249
G+VSRF+ P + H A K ILRYL+GT + F P K YTD+D G
Sbjct: 1134 GVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILK--------GYTDADMAG 1185
Query: 1250 DQVDRRSTMGYVFFFGKAPISWSSKKQAAVALSTCEAEYIAACSAACQGLWIQALLEELG 1309
D +R+S+ GY+F F ISW SK Q VALST EAEYIAA + +W++ L+ELG
Sbjct: 1186 DIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELG 1245
Query: 1310 LKTDEAVQLMVDNKSAIDLAKNPVSHGRSKHIETKYHFLRDQVSKEKIKLQHCGTDLQIA 1369
L E V + D++SAIDL+KN + H R+KHI+ +YH++R+ V E +K+ T+ A
Sbjct: 1246 LHQKEYV-VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPA 1304
Query: 1370 DVFTKPLKADRFKTLKKMMNV 1390
D+ TK + ++F+ K+++ +
Sbjct: 1305 DMLTKVVPRNKFELCKELVGM 1325
>UniRef100_Q84VH8 Gag-pol polyprotein [Glycine max]
Length = 1576
Score = 699 bits (1803), Expect = 0.0
Identities = 438/1319 (33%), Positives = 701/1319 (52%), Gaps = 102/1319 (7%)
Query: 113 LQTMRRQFELLQMET-NESIADFFNRIISLTNLMKACGEKM-TDQAIVEKVL----RTLT 166
L+ R+ + Q +T +E +D + +LT + + + TD I L R L
Sbjct: 319 LKKHRKGLSVCQSDTESEQESDSDRDVNALTGIFETAEDSSDTDSEITFDELAASYRKLC 378
Query: 167 PKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*----KSKSTDQALQAQTSK 222
K + ++ + KK+ I +L+ EAHE+ I E SK +
Sbjct: 379 IKSEKILQQEAQLKKV----IADLEAEKEAHEEEISELKGEVGFLNSKLETMKKSIKMLN 434
Query: 223 KGGFS-------GK--GGYRGKGKSKDYKNSS*KQSQF---QNQEDHDQPESSSRRGGGS 270
KG + GK G RG G + + + ++F +N+ + SR G
Sbjct: 435 KGSDTLDEVLLLGKNAGNQRGLGFNPKFAGRT-TMTEFVPAKNRTGTTMSQHLSRHHGTQ 493
Query: 271 SNYKGGKRKFDRKKIRCFNCNKIGHFSSECKAPSGGDTRGRTSDEANLAKEGSITNEEPV 330
++K RKK RC C K GH C G G S + K + + V
Sbjct: 494 ------QKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSNSR-KKMMWVPKHKAV 546
Query: 331 TLMMVTEEGESNPATCNITDEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINL 390
+L++ H +L KE WYLDSGCS HMTG KE+L+N+
Sbjct: 547 SLVV------------------HTSLRASAKED------WYLDSGCSRHMTGVKEFLLNI 582
Query: 391 DENKKSRVRFADDRFISAEGIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDF 450
+ S V F D G+G ++ DG +++VL V G+ NLIS+ QL ++ F
Sbjct: 583 EPCSTSYVTFGDGSKGKIIGMGKLV---HDGLPS-LNKVLLVKGLTANLISISQLCDEGF 638
Query: 451 SMSMKKRHLEVFDPNERKIMKVPLTPNRTF--QVKLTAIDSQCLTAELEDNSWLWHQRFG 508
+++ K V + +MK + + + + T+ S CL+++ ED +WHQRFG
Sbjct: 639 NVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSK-EDEVRIWHQRFG 697
Query: 509 HLNFKDLSSLKSKDMVHGLSQIKLPS-KVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYS 567
HL+ + + + K V G+ +K+ ++C C + KQ + ++ VL++++
Sbjct: 698 HLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLRHQTTSRVLELLHM 757
Query: 568 DVCGPFETASIGGNKYFASFIDEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKV 627
D+ GP + S+GG +Y +D++SR WV ++ KSE F VFK +++ IK
Sbjct: 758 DLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIKR 817
Query: 628 LRTDEGGEYCSNEMSNFCEENGILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLP 687
+R+D G E+ ++ + FC GI HE +A TPQ NG+ ER+NRT+ R ML K LP
Sbjct: 818 IRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELP 877
Query: 688 HRFCGEAVMTAVYVLNLCPTKSVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRK 747
+ EA+ TA Y+ N + +W GRKPSVKH IFG C+ ++RRK
Sbjct: 878 YNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRK 937
Query: 748 LDDKSETMIFIGYSSTG-AYKLYNPRTSQVEFSRDVVFEEHSAWKGKETMVVNDSMQRVN 806
+D KS+ IF+GYS+ AY+++N RT V S +VV ++ S + K+ V + ++ +
Sbjct: 938 MDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKD---VEEDVRTLG 994
Query: 807 LDLDHDDSEGIESAVVDVPGTSQNQNQ--------IQVHNPRPI----RTKTLPARFSDY 854
++ G + D N NQ IQ +P+ + + + R +
Sbjct: 995 DNVADAAKSGENAENSDSATDESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSREV 1054
Query: 855 QLIAETEFNSDGDMIHMALLADANPVKFEEAIKNKTWRLAMKEELASIERNKTWDLVDLP 914
++++ + F ++ P +EA+ ++ W AM+EEL +RN+ W+LV P
Sbjct: 1055 EIVSNSCF-----------VSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRP 1103
Query: 915 ANKTPISVKWVFKVKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVA 974
I KW+FK K N +G I+++KARLV +G+ Q G+D+ E FAPVARLE++R+++
Sbjct: 1104 EGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLG 1163
Query: 975 LASWKNWDLWQLDVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRA 1034
+A + L+Q+DVKSAFLNG L EEVY+ QP GF V +L+KALYGLKQAPRA
Sbjct: 1164 VACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRA 1223
Query: 1035 WNKRIDTFLSQTGFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSL 1094
W +R+ FL+Q G+ K ++ ++VK D+ +++ +YVDD++ G S ++ + +
Sbjct: 1224 WYERLTEFLTQQGYRKGGIDKTLFVKQ-DAENLMIAQIYVDDIVFGGMSNEMLRHFVQQM 1282
Query: 1095 NNEFEMTDLGKLSYFLGIEFVQTGEGILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKL 1154
+EFEM+ +G+L+YFLG++ Q + I + Q +Y ++K+F + + + TP +LKL
Sbjct: 1283 QSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKL 1342
Query: 1155 GLCEEEAEVDSTMFRQLVGCLRFICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYL 1214
E VD +++R ++G L ++ SR +I+Y VG+ +R+ + P+ SHL KRIL+Y+
Sbjct: 1343 SKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYV 1402
Query: 1215 KGTPNHGVFFPKHLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSK 1274
GT ++G+ + N LV Y D+DW G DR+ST G F+ G ISW SK
Sbjct: 1403 NGTSDYGIMY-------CHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSK 1455
Query: 1275 KQAAVALSTCEAEYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVS 1334
KQ V+LST EAEYIAA S+ Q +W++ +L+E ++ D + L DN SAI+++KNPV
Sbjct: 1456 KQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQD-VMTLYCDNMSAINISKNPVQ 1514
Query: 1335 HGRSKHIETKYHFLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNVLVL 1393
H R+KHI+ ++H++RD V + I L+H T+ QIAD+FTK L A++F+ L+ + + +L
Sbjct: 1515 HSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGICLL 1573
Score = 90.5 bits (223), Expect = 3e-16
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 107 KLKKVKLQTMRRQFELLQMETNESIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTLT 166
K+K +LQ + +FE L+M+ E I DF I+ + N A GE++TD+ +V K+LR+L
Sbjct: 121 KVKMSRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLP 180
Query: 167 PKFDHVVVAIEESKKLENLKIEELQGSLEAHEQRIVERSS*KSK-----STDQALQAQ-- 219
+FD V AIEE++ + N++++EL GSL+ E + +R+ KSK S D+ + +
Sbjct: 181 KRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDEGEEDEYD 240
Query: 220 TSKKGGFSGKGGYRGKGKSKDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRK 279
G + GK +K + Q+ H Q R G + +
Sbjct: 241 LDTDEGLTNAVVLLGKQFNKVLNRMD------KRQKPHVQNIPFDIRKGSKYQKRSDVKP 294
Query: 280 FDRKKIRCFNCNKIGHFSSEC 300
K I+C C GH +EC
Sbjct: 295 SHSKGIQCHGCEGYGHIIAEC 315
>UniRef100_Q9ZRJ0 ORF [Nicotiana tabacum]
Length = 1338
Score = 697 bits (1798), Expect = 0.0
Identities = 445/1316 (33%), Positives = 686/1316 (51%), Gaps = 137/1316 (10%)
Query: 121 ELLQMETNE--SIADFFNRIISLTNLMKACGEKMTDQAIVEKVLRTLTPKFDHVVVAIEE 178
+L+Q++ E ++AD N I + + + G K D+ + VL TL ++ + V+I
Sbjct: 104 KLMQVKYVEGTTVADHLNEIQGIVDQLSGMGIKFDDEVLALMVLATLPESWETLKVSITN 163
Query: 179 SKKLENLKIEELQGSLEAHEQRIVERSS*KSKSTDQALQAQTSKKGGFSGKGGYRGKGKS 238
S + +E ++ + E R RS S S + L T RG+ ++
Sbjct: 164 SAPNGVVNMETVKSGILNEEMR--RRSQGTSSSQSEVLAVTT------------RGRSQN 209
Query: 239 KDYKNSS*KQSQFQNQEDHDQPESSSRRGGGSSNYKGGKRKFDRKKIRCFNCNKIGHFSS 298
K N + G SN KF + C C K GH
Sbjct: 210 KSQSNRD--------------------KSRGKSN------KF--ANVECHYCKKKGHIKR 241
Query: 299 ECKAPSGGDTRGR---------TSDEANLAKEGSITNEEPVTLMMVTEEGESNPATCNIT 349
C+ + + + DE N E ++ ++ + N+T
Sbjct: 242 FCRQFQNDQKKNKGKKVKPEESSDDETNSFGEFNVVYDDDII---------------NLT 286
Query: 350 DEEHVTLMMVTKEGGNYPGTWYLDSGCSNHMTGNKEWLINLDENKKSRVRFADDRFISAE 409
+E TW +DSG + H T +E + RV+ + F +
Sbjct: 287 TQEM---------------TWVIDSGATIHATPRRELFSSYTLGDFGRVKMGNANFSTVV 331
Query: 410 GIGDVLVKREDGKDVVISEVLYVPGMKTNLISMGQLLEKDFSMSMKKRHLEVFDPNERKI 469
G GDV ++ +G +++ +V +VP M+ NLIS+ +L E+ + + H + + +
Sbjct: 332 GKGDVCLETMNGMKLLLRDVRHVPDMRLNLISVDKLDEEGYCNTF---HNGQWKLTKGSL 388
Query: 470 MKVPLTPNRTFQVKLTAIDSQCLT-AELEDNSWLWHQRFGHLNFKDLSSLKSKDMVHGLS 528
M T V +I Q + AE + N LWH+R GH++ K ++ L K+ + GL+
Sbjct: 389 MVARGTKQSKLYVTQASISQQVINVAENDSNIKLWHRRLGHMSEKSMARLVKKNALPGLN 448
Query: 529 QIKLPSKVCENCLVSKQPRAPFSSFTPTRSTAVLDVIYSDVCGPFETASIGGNKYFASFI 588
QI+L K C +CL KQ R F F P+R VLD+++SDVCGPF+ S+GG +YF +FI
Sbjct: 449 QIQL--KKCADCLAGKQNRVSFKRFPPSRRQNVLDLVHSDVCGPFKK-SLGGARYFVTFI 505
Query: 589 DEYSRKMWVYLLKTKSEVFSVFKVFKTMAKKQSGRSIKVLRTDEGGEYCSNEMSNFCEEN 648
D++SRK WVY LKTK +VF VFK F T+ ++++G+ +K +RTD GGEY + +C+E+
Sbjct: 506 DDHSRKTWVYTLKTKDQVFQVFKQFLTLVERETGKKLKCIRTDNGGEY-QGQFDAYCKEH 564
Query: 649 GILHEVTAPYTPQHNGVAERRNRTVLNMVRSMLKGKSLPHRFCGEAVMTAVYVLNLCPTK 708
GI H+ T P TPQ NG+AER NRT++ R +L LP F GEA++TA YVLN P
Sbjct: 565 GIRHQFTPPKTPQLNGLAERMNRTLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHSPCV 624
Query: 709 SVDSQVPEAVWSGRKPSVKHLRIFGCLCHKHIPDQRRRKLDDKSETMIFIGYSSTG-AYK 767
+ + PE +W GR S LR+FGC + H+P R KLD K+ +FIGY YK
Sbjct: 625 PLQYKAPEKIWLGRDISYDQLRVFGCKAYVHVPKDERSKLDVKTRECVFIGYGQDMLGYK 684
Query: 768 LYNPRTSQVEFSRDVVFEEHSAWKG--KETMVVNDSMQ----------RVNLDLDHDDSE 815
Y+P ++ SRDVVF E + K +DS + +V D+ + E
Sbjct: 685 FYDPVEKKLVRSRDVVFVEDQTIEDIDKVEKSTDDSAEFELPPTVVPRQVGDDVQDNQPE 744
Query: 816 GI----ESAVVDVPGTSQN--QNQIQVHNPRPIRTKTLPARFSDYQLIAETEFNSDGDMI 869
E + D G N + + P+P P +++ ++ S + +
Sbjct: 745 APGLPNEDELADTEGNEDNGDDDADEEDQPQPPILNNPPYHTRSGRVVQQSTRYSPHEYV 804
Query: 870 HMALLADAN-PVKFEEAIKNK---TWRLAMKEELASIERNKTWDLVDLPANKTPISVKWV 925
LL D P FEEAI ++ W AM++E+ S+ NKT++LV LP K + KWV
Sbjct: 805 ---LLTDGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKNKWV 861
Query: 926 FKVKLNPDGSISKHKARLVVRGFMQRGGLDYSEVFAPVARLETVRMIVALASWKNWDLWQ 985
FK+K + S+ + KARLVV+GF QR G+D+ E+F+PV ++ ++R ++ LA+ N ++ Q
Sbjct: 862 FKMKHDEHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAASLNLEVEQ 921
Query: 986 LDVKSAFLNGPLEEEVYITQPPGFEIKGSEHKVLKLRKALYGLKQAPRAWNKRIDTFLSQ 1045
+DVK+AFL+G LEEE+Y+ QP GF+ KG E V +LRK+LYGLKQAPR W K+ ++ + Q
Sbjct: 922 MDVKTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQ 981
Query: 1046 TGFHKCSVEHGVYVKSCDSGGVLLLCLYVDDLLITGSSYSKIQAVKRSLNNEFEMTDLGK 1105
G+ K + +H V+ + ++L LYVDD+LI G + S+I ++K L+ F M DLG
Sbjct: 982 HGYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKDLGP 1041
Query: 1106 LSYFLGIEFVQTGEG--ILMHQRKYILEVLKRFNLLSCNPAETPVEGNLKL------GLC 1157
LG+ ++ E + + Q KYI +VL+RFN+ P+ + +L
Sbjct: 1042 AKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTD 1101
Query: 1158 EEEAEVDSTMFRQLVGCLRF--ICHSRLEISYGVGLVSRFMSCPRQSHLAAAKRILRYLK 1215
+E +++ + VG L + +C +R +I++ VG+VSRF+S P + H A K ILRYL+
Sbjct: 1102 DERRKMERIPYASAVGSLMYAMVC-TRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLR 1160
Query: 1216 GTPNHGVFFPKHLPSQKEDGNLHLVAYTDSDWCGDQVDRRSTMGYVFFFGKAPISWSSKK 1275
GT + F + P LV YTD+D GD R+ST GY+ F +SW SK
Sbjct: 1161 GTSKLCLCFGEDNPV--------LVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKL 1212
Query: 1276 QAAVALSTCEAEYIAACSAACQGLWIQALLEELGLKTDEAVQLMVDNKSAIDLAKNPVSH 1335
Q VALST EAE+IAA A + +W++ L ELG D QL D++SAI LAKN H
Sbjct: 1213 QKCVALSTTEAEFIAATEACKELIWMKKFLTELGFSQD-GYQLFCDSQSAIHLAKNASFH 1271
Query: 1336 GRSKHIETKYHFLRDQVSKEKIKLQHCGTDLQIADVFTKPLKADRFKTLKKMMNVL 1391
RSKHI+ +Y+++RD + K+ ++L+ TD +D+ TK L +F+ ++ ++
Sbjct: 1272 SRSKHIDVRYNWIRDVLEKKMLRLEKIHTDENGSDMLTKTLPKGKFEFCREAAGIV 1327
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.320 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,328,427,873
Number of Sequences: 2790947
Number of extensions: 99512366
Number of successful extensions: 265351
Number of sequences better than 10.0: 6643
Number of HSP's better than 10.0 without gapping: 4829
Number of HSP's successfully gapped in prelim test: 1818
Number of HSP's that attempted gapping in prelim test: 251139
Number of HSP's gapped (non-prelim): 11210
length of query: 1400
length of database: 848,049,833
effective HSP length: 140
effective length of query: 1260
effective length of database: 457,317,253
effective search space: 576219738780
effective search space used: 576219738780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)
Lotus: description of TM0399.4