BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0368c.9
         (764 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q69F85 Gag-pol polyprotein [Phaseolus vulgaris]             423  e-116
UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]                  320  1e-85
UniRef100_Q8SA85 Prpol [Zea mays]                                     312  2e-83
UniRef100_Q9ZTP2 Prpol [Zea mays]                                     308  4e-82
UniRef100_Q7X8F3 OSJNBa0093P23.5 protein [Oryza sativa]               301  6e-80
UniRef100_Q8W0X7 Putative prpol [Zea mays]                            294  8e-78
UniRef100_Q8W2U3 Putative polyprotein [Oryza sativa]                  287  9e-76
UniRef100_Q7XNT6 OSJNBb0085H11.1 protein [Oryza sativa]               286  1e-75
UniRef100_Q8S636 Putative polyprotein [Oryza sativa]                  284  8e-75
UniRef100_Q6AVL1 Putative retrotransposon protein [Oryza sativa]      282  2e-74
UniRef100_Q9ZNW4 Polyprotein [Sorghum bicolor]                        282  3e-74
UniRef100_Q7G5Z9 Putative retroelement [Oryza sativa]                 269  3e-70
UniRef100_Q6AUT8 Putative gag-pol [Oryza sativa]                      267  1e-69
UniRef100_Q7XXC3 OSJNBa0027O01.10 protein [Oryza sativa]              266  2e-69
UniRef100_Q65WY4 Putative polyprotein [Oryza sativa]                  266  2e-69
UniRef100_Q7XE08 Putative gag-pol [Oryza sativa]                      265  3e-69
UniRef100_Q65WT1 Putative polyprotein [Oryza sativa]                  265  4e-69
UniRef100_Q7XS00 OSJNBb0002N06.6 protein [Oryza sativa]               264  9e-69
UniRef100_Q7XL85 OSJNBb0014D23.4 protein [Oryza sativa]               264  9e-69
UniRef100_Q8S9T2 B1064G04.18 protein [Oryza sativa]                   264  9e-69

>UniRef100_Q69F85 Gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  423 bits (1087), Expect = e-116
 Identities = 221/510 (43%), Positives = 321/510 (62%), Gaps = 21/510 (4%)

Query: 18   PKEVGAIAGGFGGGGVTSAARKRYVRAVNAVTEVPFGFLH--PDITISSADFFGVEQHLY 75
            P+E+  IAGGF GGG +++ARK+++RA+ +V   P       P IT +  DF  ++    
Sbjct: 578  PQEINYIAGGFAGGGCSNSARKKHLRAIQSVHSTPTQRRPHIPPITFTDEDFTAIDPSQD 637

Query: 76   DPIVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWV 135
            DP+V+ + I++F + +VL+DQGSS DI+Y + F ++ + E ++ PY   +VGF+ E+V  
Sbjct: 638  DPMVITVEIDKFAIAKVLVDQGSSVDILYWETFKKMKIPEAEIQPYNEQIVGFSRERVDT 697

Query: 136  RGILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLA 195
            +G +DL TTF +    K + +RYL++ A  SYNI++GR ++NRL A++ST H A+K+   
Sbjct: 698  KGFIDLYTTFGDDYLSKTINIRYLLVNANTSYNILLGRPSINRLKAIVSTPHLAMKFPSV 757

Query: 196  SGRIGRISVDQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNR---- 251
            +G I  + +DQK AR+CY  ++     +   T            + + R  GR +R    
Sbjct: 758  NGDIATVHIDQKTARECYVASLKVEPTRRLYTTSAERTTERRGRSTERRSRGRESRRHLV 817

Query: 252  ---------PTPIEETKE------LKFGDKVLKIGTRLTESQEQRLSKLLEENLDLFAWS 296
                       P  E  E      L+  D+   +GT L     + + K L +N DLFAW+
Sbjct: 818  ALVDLDPRLDDPRMEAGEDLQPIFLRDKDRKTYMGTSLKPDDRETIGKTLTKNADLFAWT 877

Query: 297  HKDMSGIDPNFICHRLALDPGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPT 356
              DM G+  + I HRL++    + + Q +R++G+E+ K  ++E +KL+ A FI +  Y T
Sbjct: 878  AADMPGVKSDVITHRLSVYTEARPIAQKKRKLGEERRKAAREETDKLIQAGFIQKAHYTT 937

Query: 357  WLANVVMVKKANGK*PMCVDYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGY 416
            WLANVVMVKK NGK  MCVDYTDLNKACPKDSYPLP+ID+LVDGA+ +++LS +DAYSGY
Sbjct: 938  WLANVVMVKKTNGKWRMCVDYTDLNKACPKDSYPLPTIDRLVDGAAGHQILSFLDAYSGY 997

Query: 417  HQIKMHSSDKDKTAFMTARANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGD 476
            +QI+M+  D++KTAF T   N+ Y+ MPFGLKN GATYQRLMD VF D +GRN+EVYV D
Sbjct: 998  NQIQMYHRDREKTAFRTDSDNFFYEVMPFGLKNAGATYQRLMDHVFHDMIGRNVEVYVDD 1057

Query: 477  MIVKSVLEANHHEELLEAFGRLRKHNMRLN 506
            ++VKS     H  +L E F  LR++ MRLN
Sbjct: 1058 IVVKSDSCEQHVSDLKEVFQALRQYRMRLN 1087


>UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]
          Length = 2001

 Score =  320 bits (820), Expect = 1e-85
 Identities = 197/502 (39%), Positives = 290/502 (57%), Gaps = 29/502 (5%)

Query: 17   MPKEV-GAIAGGFGGGGVTSAARKRYVRAVNAV----TEVPFGFLHPDITISSADFFGVE 71
            +PK V  AI GG   G  +   RK YVR VN V       P  +    I+    D  G+ 
Sbjct: 710  VPKRVINAITGGSSLGVESKRQRKAYVRQVNHVGTSYQSNPPVYSKTVISFGPEDAEGIL 769

Query: 72   QHLYDPIVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGE 131
                DP+VV + I Q  VQRVL+D GSSAD+++ DAF ++ + E  LT     L GF G+
Sbjct: 770  FPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQ 829

Query: 132  QVWVRGILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVK 191
            QV   G + L   F +  N++  ++ + V+     YN I+GR+T+N   A+I   +  +K
Sbjct: 830  QVHAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMK 889

Query: 192  YLLASGRIGRISV--DQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEG-R 248
                 G  G I+V  +Q  ARK        Y  +   +    H V+        +GE  +
Sbjct: 890  L---PGLRGVITVRGEQLAARK--------YELQGTPSVKGVHVVD------QKQGEYIK 932

Query: 249  VNRPTPIEETKELKFGD----KVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGID 304
            + +P P  +TK+++  +    K + IG  L +  E+ + K+++EN+ +FAWS  ++ G+D
Sbjct: 933  IQKPIPEGKTKKVQLDEHNPGKFILIGENLEKHIEEEILKVVKENMAVFAWSPDELQGVD 992

Query: 305  PNFICHRLALDPGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMV 364
             + I H LA+  G K   Q  RRM  ++++  + E+ KLL A+ I E+ +P WLAN V+V
Sbjct: 993  RSLIEHNLAIKSGYKPKKQKLRRMSTDRQQAAKIELEKLLKAKVIREVMHPEWLANPVLV 1052

Query: 365  KKANGK*PMCVDYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSS 424
            KKANGK  MC+D+TDLNKACPKD +PLP ID+LVD  +  EL+S +DAYSGYHQ+ M   
Sbjct: 1053 KKANGKWRMCIDFTDLNKACPKDDFPLPRIDQLVDATAGCELMSFLDAYSGYHQVFMVKE 1112

Query: 425  DKDKTAFMTARANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLE 484
            D++KT+F+T    Y +  MPFGLKN GAT+ RL+ +V A Q+GRN+E Y+ D++VKS   
Sbjct: 1113 DEEKTSFITPFGTYCFIRMPFGLKNAGATFARLIGKVLAKQLGRNVEAYIDDIVVKSKQA 1172

Query: 485  ANHHEELLEAFGRLRKHNMRLN 506
              H ++L E F  LRK +++LN
Sbjct: 1173 FTHGKDLQETFENLRKCSVKLN 1194


>UniRef100_Q8SA85 Prpol [Zea mays]
          Length = 1317

 Score =  312 bits (800), Expect = 2e-83
 Identities = 191/500 (38%), Positives = 272/500 (54%), Gaps = 12/500 (2%)

Query: 11  RSGKNSMPKEVGAIAGGFGGGGVTSAARKRYVRAVNAV-TEVPF---GFLHPDITISSAD 66
           ++G  S PK V  I GG          +K   R V  V  + PF    + H  IT S  D
Sbjct: 7   QAGAASDPKLVLPITGGSSSEPANKKQKKEAQRRVQHVGVQGPFIKSRWSHIPITFSQED 66

Query: 67  FFGVEQHLYDPIVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLV 126
               +    D +V+   I  F V  VL+D GS+ADII+  AF Q+   E  +   T  L 
Sbjct: 67  LQLKDYPHNDAMVISCVIKGFLVHNVLVDTGSAADIIFAKAFRQMQEPEDKIHDATHPLC 126

Query: 127 GFAGEQVWVRGILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTA 186
           GF G Q+   G + +  TF    N +  +V + ++     YN IIGR TLN   A++  A
Sbjct: 127 GFGGRQIVALGKITMSVTFGFINNTRTEQVVFDIVDMEYPYNAIIGRGTLNAFEAILHPA 186

Query: 187 HTAVKYLLASGRIGRISVDQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGE 246
           +  +K     G I  I   Q+ AR+   N  D     +      C +     E   S   
Sbjct: 187 YLCMKIPSDQGPIA-IHGSQEAARRAEGNWTDSKAIHNIDGAEACEQYKFRREKAAS--- 242

Query: 247 GRVNRPTPIEETKELKFGDKVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPN 306
              ++P P+   +++   ++ + +G++L+E QE+ L + L  N D+FAWS  D+ G++ +
Sbjct: 243 --ADQPKPMLLCEDI--AEQKVLLGSQLSEEQEKTLIRFLFNNKDVFAWSANDLCGVNRD 298

Query: 307 FICHRLALDPGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKK 366
            I H L +DP  +   Q  R+M D+K +  + EV +LL+A  I E+KYP WLAN VMVKK
Sbjct: 299 VIEHSLNVDPSFRPRKQRLRKMSDDKAEGARNEVKRLLSAGVIREVKYPEWLANTVMVKK 358

Query: 367 ANGK*PMCVDYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDK 426
           ANGK  MC+D+TDLNKACPKD +PLP ID LVD A+++EL+SL+D YSGYHQI M   D+
Sbjct: 359 ANGKWRMCIDFTDLNKACPKDEFPLPRIDSLVDAAASSELMSLLDCYSGYHQIWMKKEDE 418

Query: 427 DKTAFMTARANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEAN 486
            KT+F+T    Y Y  MP GLKN G ++ R+  +V   Q+GRN+  YV D+IVKS  + N
Sbjct: 419 PKTSFITPSGTYCYLRMPEGLKNAGGSFSRMTAKVLQSQIGRNVLTYVDDIIVKSTKQEN 478

Query: 487 HHEELLEAFGRLRKHNMRLN 506
           H  +L E F   R+  ++LN
Sbjct: 479 HIADLQETFASFRQAGLKLN 498


>UniRef100_Q9ZTP2 Prpol [Zea mays]
          Length = 1317

 Score =  308 bits (789), Expect = 4e-82
 Identities = 190/500 (38%), Positives = 270/500 (54%), Gaps = 12/500 (2%)

Query: 11  RSGKNSMPKEVGAIAGGFGGGGVTSAARKRYVRAVNAV-TEVPF---GFLHPDITISSAD 66
           ++G  S PK V  I GG          +K   R V  V  + PF    + H  IT S  D
Sbjct: 7   QAGAASDPKLVLPITGGSSSEPANKKQKKEAQRRVQHVGVQGPFIKSRWSHIPITFSQED 66

Query: 67  FFGVEQHLYDPIVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLV 126
               +    D +V+   I  F V  VL+D GS+ADII+  AF Q+   E  +   T  L 
Sbjct: 67  LQLKDYPHNDAMVISCVIKGFLVHNVLVDTGSAADIIFAKAFRQMQELEDKIHDATHPLC 126

Query: 127 GFAGEQVWVRGILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTA 186
           GF G Q+   G + +  TF    N +  +V + ++     YN IIGR TLN   A++  A
Sbjct: 127 GFGGRQIVALGKITMSVTFGFINNTRTEQVVFDIVDMEYPYNAIIGRGTLNAFEAILHPA 186

Query: 187 HTAVKYLLASGRIGRISVDQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGE 246
           +  +K     G I  I   Q+ AR+   N  D     +      C       E   S   
Sbjct: 187 YLCMKMPSDQGPIA-IHGSQEAARRAEGNWTDSKAIHNIDGAEACEXYKFRREKAAS--- 242

Query: 247 GRVNRPTPIEETKELKFGDKVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPN 306
              ++P P+   +++   ++ + +G++L+E QE+ L + L  N D+FAWS  D+ G++ +
Sbjct: 243 --ADQPKPMLLCEDI--AEQKVLLGSQLSEEQEKTLIRFLFNNKDVFAWSANDLCGVNRD 298

Query: 307 FICHRLALDPGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKK 366
            I H L +DP  +   Q  R+M D+K +  + EV +LL+A  I E+KYP WLAN VMVKK
Sbjct: 299 VIEHSLNVDPSFRPRKQRLRKMSDDKAEGARNEVKRLLSAGVIREVKYPEWLANTVMVKK 358

Query: 367 ANGK*PMCVDYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDK 426
           ANGK  MC+D+TDLNKACPKD +PLP ID LVD  +++EL+SL+D YSGYHQI M   D+
Sbjct: 359 ANGKWRMCIDFTDLNKACPKDEFPLPRIDSLVDATASSELMSLLDCYSGYHQIWMKREDE 418

Query: 427 DKTAFMTARANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEAN 486
            KT+F+T    Y Y  MP GLKN G ++ R+  +V   Q+GRN+  YV D+IVKS  + N
Sbjct: 419 PKTSFITPSGTYCYLRMPEGLKNAGGSFSRMTAKVLQSQIGRNVLTYVDDIIVKSTKQEN 478

Query: 487 HHEELLEAFGRLRKHNMRLN 506
           H  +L E F   R+  ++LN
Sbjct: 479 HIADLQETFASFRQAGLKLN 498


>UniRef100_Q7X8F3 OSJNBa0093P23.5 protein [Oryza sativa]
          Length = 2074

 Score =  301 bits (770), Expect = 6e-80
 Identities = 183/481 (38%), Positives = 272/481 (56%), Gaps = 23/481 (4%)

Query: 34   TSAARKRYVRAVNAVTEVPFG---FLHPDITISSADFFGVEQHLYDPIVVLLRINQFNVQ 90
            T   RK  +R V+++T    G   +++  I+    D  GV     DP+V+   I  F V+
Sbjct: 1421 TQRRRKMQIRMVHSITSAGEGAPQYVNQLISFGPEDAEGVLFPHQDPLVISAEIAGFEVR 1480

Query: 91   RVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRGILDLDTTFCEREN 150
            R+L+D GSSAD+IY +A+ ++GL  + LTP   SL GF+GE V V G   L   F   EN
Sbjct: 1481 RILVDGGSSADVIYAEAYAKMGLPTQALTPALTSLRGFSGEAVQVLGQALLLIAFGSGEN 1540

Query: 151  IKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASGRIGRISVDQKIAR 210
             +  ++ + V+    +YN I GR TLN+L A+    +  +K    +G I    +    A 
Sbjct: 1541 RREEQILFDVVNIPYNYNAIFGRATLNKLEAISHHNYLKLKMPGPTGVIVVKGLQPSAAS 1600

Query: 211  KCYCNAIDRYGRKSALTGHRCHEVNV-PEENLDSRGEGRVNRPTPIEETKELKFGD---- 265
            KC    I+R            H V   P E           +PTP  +  +++  D    
Sbjct: 1601 KCDLAIINR----------AVHNVKTEPHER-----PKHTPKPTPHGKVTKVQINDADPT 1645

Query: 266  KVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALDPGIKLVTQTR 325
            K++ +G  + E + + + ++L++N+D+FAWS  ++ G+  + I H LA+ P IK   Q  
Sbjct: 1646 KLVSLGGDMGEEEVESILEVLKKNIDIFAWSPDEVGGVPADLIMHHLAVKPNIKPRKQKL 1705

Query: 326  RRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCVDYTDLNKACP 385
            R+M  ++++  + EV KLL A  I EI +P WLAN V+V+K+NGK  MCVD+TDLNKACP
Sbjct: 1706 RKMSADRQEATKTEVQKLLRAGVIQEIDHPEWLANPVLVRKSNGKWRMCVDFTDLNKACP 1765

Query: 386  KDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTARANYSYQTMPF 445
            K  +PLP ID+LVD  +  EL+S +DAYSGYHQI M+  D  KT+F+T    + +  MPF
Sbjct: 1766 KHDFPLPRIDQLVDLTAGCELMSFLDAYSGYHQIHMNPLDIPKTSFITPFGTFCHLRMPF 1825

Query: 446  GLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAFGRLRKHNMRL 505
            GL+N GAT+ RL+ +V   Q+GRN+E YV D++VKS    +H  +L E F  L    ++L
Sbjct: 1826 GLRNAGATFARLVYKVLGKQLGRNVEAYVDDIVVKSRKAFDHAIDLQETFDNLCVAGIKL 1885

Query: 506  N 506
            N
Sbjct: 1886 N 1886


>UniRef100_Q8W0X7 Putative prpol [Zea mays]
          Length = 969

 Score =  294 bits (752), Expect = 8e-78
 Identities = 180/460 (39%), Positives = 252/460 (54%), Gaps = 11/460 (2%)

Query: 50  EVPF---GFLHPDITISSADFFGVEQHLYDPIVVLLRINQFNVQRVLLDQGSSADIIYGD 106
           +VPF    + H  IT S  D    +    D +V+   I  F V  VL+D GS+ADII   
Sbjct: 241 QVPFIKSRWSHIPITFSQEDLQLKDYPHNDAMVISCIIKGFLVHNVLVDTGSAADIIVAK 300

Query: 107 AFDQLGLDERDLTPYTGSLVGFAGEQVWVRGILDLDTTFCERENIKMLKVRYLVLRAMGS 166
           AF Q+   E  +   T  L GF G Q+     + +  TF    N +  +V + ++     
Sbjct: 301 AFRQMQEPEDKIHDSTHPLCGFGGRQIVALDKIMMPVTFGFVNNTRTEQVVFDIVDMEYP 360

Query: 167 YNIIIGRNTLNRLCAVISTAHTAVKYLLASGRIGRISVDQKIARKCYCNAIDRYGRKSAL 226
           YN IIG  TLN   A++  A+  +K     G I  I   Q+ ARK   N  D     +  
Sbjct: 361 YNAIIGHGTLNAFEAILHPAYLYMKIPSDQGPIA-IHGSQEAARKAEGNWTDSKAIHNID 419

Query: 227 TGHRCHEVNVPEENLDSRGEGRVNRPTPIEETKELKFGDKVLKIGTRLTESQEQRLSKLL 286
               C +     E   S  + ++      E+  E K     + +G++LTE QE+ L++ L
Sbjct: 420 GAEACEQYKYRREKAASTDQPKLM--LLCEDIAEQK-----VLLGSQLTEEQEKTLTRFL 472

Query: 287 EENLDLFAWSHKDMSGIDPNFICHRLALDPGIKLVTQTRRRMGDEKEKVIQQEVNKLLAA 346
             N D+FAWS  D+ G++ +   H L +DP  +   Q  R+M D+K K  + EV +LL+A
Sbjct: 473 FNNKDVFAWSANDLCGVNRDVNEHSLNVDPSFRPRKQRLRKMSDDKAKGARNEVKRLLSA 532

Query: 347 EFI*EIKYPTWLANVVMVKKANGK*PMCVDYTDLNKACPKDSYPLPSIDKLVDGASNNEL 406
             I E+KYP WLAN VMVKKANGK  MC+D+TDLNKACPKD +PL  ID LVD A+++EL
Sbjct: 533 GVIREVKYPEWLANTVMVKKANGKWRMCIDFTDLNKACPKDEFPLSRIDSLVDAAASSEL 592

Query: 407 LSLMDAYSGYHQIKMHSSDKDKTAFMTARANYSYQTMPFGLKNTGATYQRLMDRVFADQV 466
           +SL+D YSGYHQI M   D+ KT+F+T    Y Y  MP GLKN G ++ R+  +V   Q+
Sbjct: 593 MSLLDCYSGYHQIWMKKEDEPKTSFITPSGTYCYLRMPEGLKNAGGSFSRMTAKVLHSQI 652

Query: 467 GRNMEVYVGDMIVKSVLEANHHEELLEAFGRLRKHNMRLN 506
           GRN+  YV D+IVKS+ + NH  +L E F   R+  ++LN
Sbjct: 653 GRNVLTYVDDIIVKSMKQENHIADLQETFANFRQAVLKLN 692


>UniRef100_Q8W2U3 Putative polyprotein [Oryza sativa]
          Length = 1931

 Score =  287 bits (734), Expect = 9e-76
 Identities = 171/465 (36%), Positives = 262/465 (55%), Gaps = 10/465 (2%)

Query: 55   FLHPDITISSADFFGVEQHLYDPIVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLD 114
            +L+  I+    D  GV     DP+V+   I  F V+R+L+D GSSAD+I+ +A+  +GL 
Sbjct: 767  YLNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYATMGLP 826

Query: 115  ERDLTPYTGSLVGFAGEQVWVRGILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRN 174
             + LTP   SL GF GE V V G   L   F   EN +  ++ + V+    +YN I GR 
Sbjct: 827  TQSLTPAPTSLHGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRA 886

Query: 175  TLNRLCAVISTAHTAVKYLLASGRIGRISVDQKIARKCYCNAIDRYGRKSALTGHRCHEV 234
            TLN+  A+    +  +K    +  I    +    A K     I+R     A+        
Sbjct: 887  TLNKFEAICHHNYLKLKMPGPTWVIVVKGLQPSAASKGDLAIINR-----AVYSVETEPH 941

Query: 235  NVPEENLDSRGEGRVNRPTPIEETKELKFGDKVLKIGTRLTESQEQRLSKLLEENLDLFA 294
              P+        G++ +   I++   +    K++ +G  + E + + + ++L++N+D+FA
Sbjct: 942  ERPKHMPKPTRHGKITK-MQIDDADPI----KLVSLGGDMGEEEVESILEVLKKNIDIFA 996

Query: 295  WSHKDMSGIDPNFICHRLALDPGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKY 354
            WS  ++ G+  + I H LA+ P IK   Q  R+M  ++++  + E+ KLL A  I EI +
Sbjct: 997  WSPNEVGGVPTDLIMHHLAVKPDIKPRKQKLRKMSADRQEAAKAEIQKLLRAGVIQEIDH 1056

Query: 355  PTWLANVVMVKKANGK*PMCVDYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYS 414
            P WLAN V+V+K+NGK  MCVD+TDLNKACPKD +PLP ID+LVD  +  EL+S +DAYS
Sbjct: 1057 PEWLANPVLVRKSNGKWRMCVDFTDLNKACPKDDFPLPRIDQLVDSTAGCELMSFLDAYS 1116

Query: 415  GYHQIKMHSSDKDKTAFMTARANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYV 474
            GYHQI M+  D  KT+F+T    + +  MPFGL+N GAT+ RL+ +V   Q+GRNME Y+
Sbjct: 1117 GYHQIHMNPLDIPKTSFITPFGTFCHLRMPFGLRNAGATFARLVYKVLGKQLGRNMEAYI 1176

Query: 475  GDMIVKSVLEANHHEELLEAFGRLRKHNMRLNLKSSLLVYKEESL 519
             D++VKS    +H  +L + F  LR   +RLN +  +   + + L
Sbjct: 1177 DDIVVKSRKAFDHAIDLQKTFDSLRTAGIRLNPEKCVFGVRADKL 1221


>UniRef100_Q7XNT6 OSJNBb0085H11.1 protein [Oryza sativa]
          Length = 1605

 Score =  286 bits (733), Expect = 1e-75
 Identities = 180/477 (37%), Positives = 266/477 (55%), Gaps = 23/477 (4%)

Query: 38  RKRYVRAVNAVTEVPFG---FLHPDITISSADFFGVEQHLYDPIVVLLRINQFNVQRVLL 94
           +K  +R V+ +T    G   +L+  I+  S D  GV     DP+V+      F V+R+L+
Sbjct: 456 KKMRIRTVHNITSAGKGTPQYLNQLISFGSEDAEGVMFPHQDPLVISAERAGFEVRRILV 515

Query: 95  DQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRGILDLDTTFCERENIKML 154
            +GSSAD+I+ +A+ ++GL  + LTP   SL GF GE V V G   L       EN +  
Sbjct: 516 GRGSSADVIFAEAYAKMGLPTQALTPAPASLRGFGGEAVQVLGQALLLIALGSGENRREE 575

Query: 155 KVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASGRIGRISVDQKIARKCYC 214
           +V + V+    +YN I GR TLN+  A+    +  +K    +G I    +    A K   
Sbjct: 576 QVLFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLKMPGLTGVIVVKGLQPSAASKGDL 635

Query: 215 NAIDRYGRKSALTGHRCHEV-NVPEENLDSRGEGRVNRPTPIEETKELKFGD----KVLK 269
             I+R             EV NV  E  D        +PTP  +  +++  D    K++ 
Sbjct: 636 AIINR-------------EVHNVEAEPYDR--PKHAPKPTPHSKIIKVQIDDANPTKLVS 680

Query: 270 IGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALDPGIKLVTQTRRRMG 329
           +G  + E +   + ++L++N+D+FAWS  ++ G+  + I H LA+    K   Q  R+M 
Sbjct: 681 LGDDMGEEEAGSILEVLKKNIDIFAWSPDEVGGVWTDLIMHHLAVKLDAKPRKQKLRKMS 740

Query: 330 DEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCVDYTDLNKACPKDSY 389
            ++++ ++ EV KLL A  I EI +P WLAN V+V+K+  K  MCVD+TDLNKACPKD +
Sbjct: 741 ADRQEAVKAEVQKLLRAGVIQEIDHPEWLANPVLVRKSTSKKRMCVDFTDLNKACPKDDF 800

Query: 390 PLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTARANYSYQTMPFGLKN 449
           PLP ID+LVD  +  EL+S +DAYSGYHQI M+  D  KTAF+T    + +  MPFGL+N
Sbjct: 801 PLPRIDQLVDSTAGCELMSFLDAYSGYHQIHMNPPDIPKTAFITPFGTFCHLRMPFGLRN 860

Query: 450 TGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAFGRLRKHNMRLN 506
           TGAT+ RL+ +V   Q+GRN+E YV D++VKS    +H   L E F  LR   ++LN
Sbjct: 861 TGATFARLVYKVLCKQLGRNVEAYVDDIVVKSRKAFDHVSNLQETFDNLRAAGIKLN 917


>UniRef100_Q8S636 Putative polyprotein [Oryza sativa]
          Length = 1722

 Score =  284 bits (726), Expect = 8e-75
 Identities = 178/476 (37%), Positives = 265/476 (55%), Gaps = 21/476 (4%)

Query: 38  RKRYVRAVNAVTEVPFG---FLHPDITISSADFFGVEQHLYDPIVVLLRINQFNVQRVLL 94
           +K  +R V+++T    G   +L+  I     D  GV     DP+V+   I  F V+R+L+
Sbjct: 493 KKMQIRMVHSITSAGEGAPQYLNQLIYFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILV 552

Query: 95  DQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRGILDLDTTFCERENIKML 154
           D GSSAD+I+ +A+ ++GL  + LTP   SL GF GE V V G   L   F   EN +  
Sbjct: 553 DGGSSADVIFAEAYAKMGLTSQALTPAPASLRGFGGEAVQVLGQALLLIAFGSGENRREE 612

Query: 155 KVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASGRIGRISVDQKIARKCYC 214
           +V + V+    +YN I GR TLN    +    +  +K    +G I    +    A K   
Sbjct: 613 QVLFDVVDIPYNYNTIFGRATLNMFEVISHHNYLELKMPGPTGVIVVKGLQPSAASKGDL 672

Query: 215 NAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNRPTPIEETKELKFGD----KVLKI 270
             I+R            H V V    L  R +    +PTP  +  +++  D    K++ +
Sbjct: 673 AIINR----------AVHNVEV---KLHDRPK-HAPKPTPHGKIIKVQIDDAVPTKLVSL 718

Query: 271 GTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALDPGIKLVTQTRRRMGD 330
           G  + + + + + K+ ++N+D+FAWS  ++ G+    I H LA+ P  K   Q  R+M  
Sbjct: 719 GGDMGKEEVESILKVPKKNIDIFAWSPDEVGGVSIVLIMHHLAVKPEAKPRKQKLRKMSA 778

Query: 331 EKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCVDYTDLNKACPKDSYP 390
           ++++  + EV KLL A  I EI +P WLAN V+V+K+NGK  MCVD+TDLNKACPKD +P
Sbjct: 779 DRQEAAKAEVQKLLRAGVIQEIDHPEWLANPVLVQKSNGKWRMCVDFTDLNKACPKDDFP 838

Query: 391 LPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTARANYSYQTMPFGLKNT 450
           LP ID+LVD  +  EL+S ++AYSGYHQI M+  D  KT+F+T    + +  MPFGL+N 
Sbjct: 839 LPRIDQLVDSTAGCELMSFLNAYSGYHQIHMNPLDIPKTSFITPFDTFCHLRMPFGLRNA 898

Query: 451 GATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAFGRLRKHNMRLN 506
           GAT+ RL+ +V   Q+GRN+E YV D++VK     +H  +L E F  LR   ++LN
Sbjct: 899 GATFARLVYKVLCKQLGRNVEAYVDDIVVKIRKAFDHAIDLQETFDNLRAAGIKLN 954


>UniRef100_Q6AVL1 Putative retrotransposon protein [Oryza sativa]
          Length = 1168

 Score =  282 bits (722), Expect = 2e-74
 Identities = 170/449 (37%), Positives = 253/449 (55%), Gaps = 25/449 (5%)

Query: 66  DFFGVEQHLYDPIVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSL 125
           D  GV     DP+V+   I  F V+R+L+D GSS D+I+ +A+ ++GL  + LTP   SL
Sbjct: 359 DAEGVTFPHQDPLVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPTSL 418

Query: 126 VGFAGEQVWVRGILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVIST 185
            GF GE V V G   L   F   EN +  +V + V+    +YN I GR TLN+   +   
Sbjct: 419 RGFGGEAVQVLGQAQLIVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNKFEVI--- 475

Query: 186 AHTAVKYLLASGRIGRISVDQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRG 245
           +H     L  SG  G I +                   SA +      +N    N+++  
Sbjct: 476 SHHNYLKLKMSGPAGVIVIKGL--------------HPSAASKGDLAIINKAVHNVEAEP 521

Query: 246 EGR---VNRPTPIEETKELKFGD----KVLKIGTR-LTESQEQRLSKLLEENLDLFAWSH 297
             R   V +P P  +  +++  D    K++ +G   + E + + + ++L++N+D+FAW  
Sbjct: 522 HDRAKHVPKPAPHGKIIKMQIDDADPIKLVSLGGGDMGEEEAKNILEVLKKNIDIFAWGP 581

Query: 298 KDMSGIDPNFICHRLALDPGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTW 357
            ++ G+  + I H LA+ P  K   Q   +M  ++++  + EV KLL A  I EI +P W
Sbjct: 582 DEVGGVSADLIMHHLAVKPDAKPRKQKLCKMSADRQEAAKAEVQKLLKAGVIQEIDHPEW 641

Query: 358 LANVVMVKKANGK*PMCVDYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYH 417
           LAN V+V+K+NGK  MCVD+TDLNKACPKD +PLP ID+LVD  +  EL+S +DAYSGYH
Sbjct: 642 LANSVLVRKSNGKWRMCVDFTDLNKACPKDDFPLPRIDRLVDSTAGCELMSFLDAYSGYH 701

Query: 418 QIKMHSSDKDKTAFMTARANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDM 477
           QI+M+ +D  KTAF+T    + +  MPFGL+N GAT+ RL+ +V   Q+G+N+E YV D+
Sbjct: 702 QIRMNPADIPKTAFITPFGTFCHLRMPFGLRNAGATFARLVYKVLYKQLGQNVEAYVDDI 761

Query: 478 IVKSVLEANHHEELLEAFGRLRKHNMRLN 506
           +VKS    +H  +L E F  L    M+LN
Sbjct: 762 VVKSRKAFDHASDLQETFDNLHAAGMKLN 790


>UniRef100_Q9ZNW4 Polyprotein [Sorghum bicolor]
          Length = 1877

 Score =  282 bits (721), Expect = 3e-74
 Identities = 180/498 (36%), Positives = 256/498 (51%), Gaps = 29/498 (5%)

Query: 24   IAGGFGGGGVTSAARKRYVRAVNAV-----------TEVPFGFLHPDITISSADFFGVEQ 72
            IAGG      T   +K ++R VN V           +  P  F   D+ + S        
Sbjct: 580  IAGGSSMEFQTKKQKKDHLRLVNNVAVQGPVRCTDWSRTPITFTEEDLRLESYPHT---- 635

Query: 73   HLYDPIVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQ 132
               D +V+   +  + V R+L+D GSSADII+   FDQ+ L    L P    L+GF G+Q
Sbjct: 636  ---DALVITTNVAGWGVSRILVDSGSSADIIFAGTFDQMKLSRSQLQPSESPLIGFGGKQ 692

Query: 133  VWVRGILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKY 192
            +   G + L  +F   EN +   V + V+     YN I GR  LN+  A     +  +K 
Sbjct: 693  IHALGKVALPVSFGTTENARTEYVTFDVVDLHYPYNAIFGRGFLNKFNAAAHMGYLCMKI 752

Query: 193  LLASGRIGRISVDQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNRP 252
                G I  +   QK AR     AI +  R         HE + P +       G+ N  
Sbjct: 753  PALHGVI-TVHGSQKEARNIE-KAIYKSFRNINSVDSTQHEASQPPD----MPRGKTNLA 806

Query: 253  TPIEETKELKFG----DKVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFI 308
               EETK +       DK + I   L+  +E  L  +L++N D+FAWS  D+ G+  + I
Sbjct: 807  DQ-EETKCIPLQEAVPDKKVTISATLSREEELELLDVLQKNQDIFAWSAADLQGVSRDII 865

Query: 309  CHRLALDPGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKAN 368
             H L +DP ++   Q +R+M +E+    + EV +LL A+ I E+ YP WLANVV+V K N
Sbjct: 866  EHSLDIDPRMRPKKQRQRKMSEERTLAAKAEVQRLLDAKVIREVIYPEWLANVVLVPKKN 925

Query: 369  GK*PMCVDYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDK 428
            GK  MC+D+TDLNKAC KDS+PLP ID  VD A+  +  SL+D +SGYHQI +   D+ K
Sbjct: 926  GKMRMCIDFTDLNKACVKDSFPLPRIDTSVDKAAGCQRFSLLDCFSGYHQIWLKKEDEGK 985

Query: 429  TAFMTARANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHH 488
             +F T    Y Y  MP GLKN GAT+ R+M +V   Q+ RN+  YV D++V S  + +H 
Sbjct: 986  ASFTTPFGTYCYTRMPEGLKNAGATFSRMMGKVLGSQLQRNIIAYVDDVVVMSKRKEDHI 1045

Query: 489  EELLEAFGRLRKHNMRLN 506
            ++L E F  LR   ++LN
Sbjct: 1046 KDLQETFVNLRSAGLKLN 1063


>UniRef100_Q7G5Z9 Putative retroelement [Oryza sativa]
          Length = 1111

 Score =  269 bits (687), Expect = 3e-70
 Identities = 170/481 (35%), Positives = 254/481 (52%), Gaps = 24/481 (4%)

Query: 33  VTSAARKRYVRAVNAVTEVPFG---FLHPDITISSADFFGVEQHLYDPIVVLLRINQFNV 89
           V+   +K  +RAV+ +     G   +L   I+    D  GV     D + V   +  F V
Sbjct: 524 VSKRQKKMQLRAVHNIVSAGDGVPRYLSQPISFGLEDTEGVLFPHQDMLFVSAEMAGFEV 583

Query: 90  QRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRGILDLDTTFCERE 149
           + +L+D GSSAD+++   + ++GL    L+    SL GF GE V V G   +   F  +E
Sbjct: 584 RCILIDGGSSADVMFAGTYAKMGLPTLALSQAPTSLRGFGGEAVQVLGQALIKVAFGSQE 643

Query: 150 NIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASGRIGRISVDQKIA 209
           N +  ++ + ++    +YN I  R TL +  AV   +H     L   G  G I V     
Sbjct: 644 NRREEEILFDIVDIPYNYNAIFCRGTLTKFEAV---SHHNYLKLKMPGPAGVIVVKGSQP 700

Query: 210 RKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNRPTPIEETKELKFGD---- 265
                   DR             EV+  E     + +  + +PTP  +  + +  D    
Sbjct: 701 SAVAATPFDR-------------EVHTLEVEGQEKAKS-IPKPTPHGKVIQRQIDDFDPA 746

Query: 266 KVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALDPGIKLVTQTR 325
           KV+ +G  L+E +   +  +L++N+D+FAW   D+ G+ P  I H LA+ P  K   Q  
Sbjct: 747 KVISLGGDLSEQEVDGILAVLKKNIDIFAWGLDDVGGVSPYLIMHYLAVKPEAKTKKQKL 806

Query: 326 RRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCVDYTDLNKACP 385
           R+M  ++++  + EVNKLL A  I EI +P WLAN V +KK+NGK  MCVD+TDLNK CP
Sbjct: 807 RKMSADRQEAAKVEVNKLLRAGVIQEIDHPEWLANPVPMKKSNGKWRMCVDFTDLNKMCP 866

Query: 386 KDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTARANYSYQTMPF 445
           KD +PLP ID+LVD  +  +L+S +DAYSGYHQI M+ +D   TAF+     + +  M F
Sbjct: 867 KDDFPLPRIDQLVDSTAGCKLISFLDAYSGYHQIHMNPTDIPMTAFIMPFGTFCHLRMSF 926

Query: 446 GLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAFGRLRKHNMRL 505
           GL+N G T+ RL+ +V   Q+GRN+E YV +++VKS    +H  +L E F  LR   M+L
Sbjct: 927 GLRNAGVTFTRLVYKVLGLQLGRNVEAYVDEIVVKSCKAFDHASDLQETFNNLRTAGMKL 986

Query: 506 N 506
           N
Sbjct: 987 N 987


>UniRef100_Q6AUT8 Putative gag-pol [Oryza sativa]
          Length = 1631

 Score =  267 bits (682), Expect = 1e-69
 Identities = 171/483 (35%), Positives = 259/483 (53%), Gaps = 37/483 (7%)

Query: 31  GGVTSAARKRYVRAVNAVTEVPFG---FLHPDITISSADFFGVEQHLYDPIVVLLRINQF 87
           G ++   +K  +R V+++T    G   +L+  I+    D  GV     DP+V+   I  F
Sbjct: 502 GQLSKRQKKMQIRMVHSITSAGKGAPQYLNQLISFGPEDAEGVMFPHQDPLVISAEIAGF 561

Query: 88  NVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRGILDLDTTFCE 147
            V+R+L+D GSSAD+I+ +A+ ++GL  + LTP   SL GF GE V V G   L   F  
Sbjct: 562 EVRRILVDGGSSADVIFAEAYAKMGLPTQALTPAPASLRGFGGEAVRVLGQALLLIAFGS 621

Query: 148 RENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASGRIGRISVDQK 207
            EN +  ++ + V+    +YN I GR TLN+  A+    +  +K    +G I    +   
Sbjct: 622 GENRREEQILFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLKMPGPAGVIVVKGLQSS 681

Query: 208 IARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNRPTPIEETKELKFGD-- 265
            A K     I+R         H     N P             + TP  +  +++  D  
Sbjct: 682 AASKSDLAIINRAVHCVQTEPHE-RPKNTP-------------KLTPHGKITKVQIDDAD 727

Query: 266 --KVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALDPGIKLVTQ 323
             K++ +G  + E + + + ++L++N+++FAWS  +                P IK    
Sbjct: 728 PTKLVSLGDDMGEEEVESMLEVLKKNINIFAWSPDE----------------PDIKPRKH 771

Query: 324 TRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCVDYTDLNKA 383
              +M  ++++  + EV KLL A  I EI +P WLAN V+V+K+NGK  MCVD+TDLNKA
Sbjct: 772 KLCKMSADRQEAAKAEVQKLLRAGVIQEIDHPEWLANPVLVRKSNGKWRMCVDFTDLNKA 831

Query: 384 CPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTARANYSYQTM 443
           CPKD +PLP ID+LVD  +  EL+S +DAYSGYHQI M+  D  KT+F+T    + +  M
Sbjct: 832 CPKDDFPLPRIDQLVDSTAGCELMSFLDAYSGYHQIHMNPLDIPKTSFITPFGTFCHLKM 891

Query: 444 PFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAFGRLRKHNM 503
           PFGL+N G T+ RL+ +V   Q+GRN+E YV D++VKS    +H  +L E F  LR   +
Sbjct: 892 PFGLRNAGTTFARLVYKVLGKQLGRNVEAYVDDIVVKSRKAFDHAIDLQETFDSLRAAGI 951

Query: 504 RLN 506
           +LN
Sbjct: 952 KLN 954


>UniRef100_Q7XXC3 OSJNBa0027O01.10 protein [Oryza sativa]
          Length = 2020

 Score =  266 bits (680), Expect = 2e-69
 Identities = 165/431 (38%), Positives = 226/431 (52%), Gaps = 32/431 (7%)

Query: 78   IVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRG 137
            +VV L +    + RVL+D G++ +I+   AFD +      L P +  ++G      W  G
Sbjct: 613  MVVSLTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLG 671

Query: 138  ILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASG 197
             +DL  TF    N +  +V + V      YN ++GR  L +  A +  A+  +K     G
Sbjct: 672  HIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKM---PG 728

Query: 198  RIGRISV--DQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNRPTPI 255
              G ISV  D K+A  C     D     S   G                G+ R+    P 
Sbjct: 729  PGGPISVHGDLKVALACLEQRADHLAAASKPEG----------------GDERLGASAPA 772

Query: 256  EETKELKFGDKVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALD 315
               + +  GD+V           E  L   L  N D+FAW   DM G+    I HRLA+ 
Sbjct: 773  TPRQRMITGDEV----------PEDALVSFLRANADVFAWRPADMVGVPREVIEHRLAVR 822

Query: 316  PGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCV 375
            PG + V Q  RR   E++  I++EV +LL A FI E+ +P WLAN V+V KANGK  MC+
Sbjct: 823  PGARPVRQKVRRQAPERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCI 882

Query: 376  DYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTAR 435
            DYTDLNKACPKD YPLP ID++VD  +  +LL  +DAYSGYHQI+M   D++KTAF+T  
Sbjct: 883  DYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPI 942

Query: 436  ANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAF 495
              Y Y TMPFGLKN G T+QR       +Q+GRN+E YV D++VK+  +     +L E F
Sbjct: 943  GTYCYTTMPFGLKNAGPTFQRTTRISLGNQLGRNVEAYVDDLVVKTRNQEMLLSDLAETF 1002

Query: 496  GRLRKHNMRLN 506
              LR   ++LN
Sbjct: 1003 ESLRSARIKLN 1013


>UniRef100_Q65WY4 Putative polyprotein [Oryza sativa]
          Length = 2027

 Score =  266 bits (679), Expect = 2e-69
 Identities = 165/431 (38%), Positives = 225/431 (51%), Gaps = 32/431 (7%)

Query: 78   IVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRG 137
            +VV   I    + RVL+D G++ +I+   AFD +      L P +  ++G      W  G
Sbjct: 613  MVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLG 671

Query: 138  ILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASG 197
             +DL  TF    N +  +V + V      YN ++GR  L +  A +  A+  +K     G
Sbjct: 672  HIDLPVTFGGPANFRTERVSFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKM---PG 728

Query: 198  RIGRISV--DQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNRPTPI 255
              G ISV  D K+A  C     DR    S   G                G+ R+    P 
Sbjct: 729  PGGPISVRGDLKVALACMEQRADRLAAASKPEG----------------GDERLGPSAPT 772

Query: 256  EETKELKFGDKVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALD 315
               + +  GD+V           E  L   L  N D+FAW   DM G+    I HRLA+ 
Sbjct: 773  APRQRMATGDEV----------PEDALVSFLRANADVFAWRPADMPGVPREVIEHRLAVR 822

Query: 316  PGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCV 375
            PG + V Q  RR   E++  I++EV +LL A FI E+ +P WLAN V+V KANGK  MC+
Sbjct: 823  PGARPVRQKVRRQAPERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCI 882

Query: 376  DYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTAR 435
            DYTDLNKACPKD YPLP ID++VD  +  +LL  +DAYSGYHQI+M   D++KTAF+T  
Sbjct: 883  DYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPV 942

Query: 436  ANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAF 495
              Y Y +MPFGLKN G T+QR        Q+GRN+E YV D++VK+  +     +L E F
Sbjct: 943  GTYCYTSMPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDDLVVKTRNQETLLSDLAETF 1002

Query: 496  GRLRKHNMRLN 506
              LR   ++LN
Sbjct: 1003 ENLRSARIKLN 1013


>UniRef100_Q7XE08 Putative gag-pol [Oryza sativa]
          Length = 1807

 Score =  265 bits (678), Expect = 3e-69
 Identities = 165/431 (38%), Positives = 224/431 (51%), Gaps = 32/431 (7%)

Query: 78  IVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRG 137
           +VV   +    + RVL+D G++ +I+   AFD +      L P +  ++G      W  G
Sbjct: 565 MVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMILRP-SQPIIGVTPGHTWPLG 623

Query: 138 ILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASG 197
            +DL  TF    N +  +V + V      YN ++GR  L +  A +  A+  +K     G
Sbjct: 624 HIDLPVTFGGPANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKM---PG 680

Query: 198 RIGRISV--DQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNRPTPI 255
             G ISV  D K+A  C     DR    S   G                G+ R+    P 
Sbjct: 681 PNGPISVHGDLKVALACMEQRADRLAVVSKPEG----------------GDERLGTSAPA 724

Query: 256 EETKELKFGDKVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALD 315
              + +   D+V           E  L   L  N D+FAW   DM G+    I HRLA+ 
Sbjct: 725 APRQRIVTSDEV----------PEDALGSFLRANADVFAWRPADMPGVPREVIEHRLAVR 774

Query: 316 PGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCV 375
           PG +LV Q  RR   E++  I++EV +LL A FI E+ +P WLAN V+V KANGK  MC+
Sbjct: 775 PGARLVRQKVRRQAPERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCI 834

Query: 376 DYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTAR 435
           DYTDLNKACPKD YPLP ID++VD  +  +LL  +DAYSGYHQI M   D++KTAF+T  
Sbjct: 835 DYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIHMAREDEEKTAFITPI 894

Query: 436 ANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAF 495
             Y Y TMPFGLKN G T+QR        Q+GRN+E YV D++VK+  +     +L E F
Sbjct: 895 GTYCYTTMPFGLKNAGPTFQRTTRISLGSQLGRNVEAYVDDLVVKTRNQETLLSDLAETF 954

Query: 496 GRLRKHNMRLN 506
             LR   ++LN
Sbjct: 955 ESLRSARIKLN 965


>UniRef100_Q65WT1 Putative polyprotein [Oryza sativa]
          Length = 1992

 Score =  265 bits (677), Expect = 4e-69
 Identities = 165/431 (38%), Positives = 225/431 (51%), Gaps = 32/431 (7%)

Query: 78  IVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRG 137
           +VV   I    + RVL+D G++ +I+   AFD +      L P +  ++G      W  G
Sbjct: 578 MVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLG 636

Query: 138 ILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASG 197
            +DL  TF    N +  +V + V      YN ++GR  L +  A +  A+  +K     G
Sbjct: 637 HIDLPVTFGGPANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKM---PG 693

Query: 198 RIGRISV--DQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNRPTPI 255
             G ISV  D K+A  C     DR    S   G                G+ R+    P 
Sbjct: 694 PDGPISVHGDLKVALACMEQRADRLAVVSKPEG----------------GDERLGTSAPA 737

Query: 256 EETKELKFGDKVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALD 315
              + +  GD+V           E  L   L  N D+FAW   DM G+    I HRLA+ 
Sbjct: 738 APRQRIVTGDEV----------PEDALVSFLRANADVFAWRPADMPGVPREVIEHRLAVR 787

Query: 316 PGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCV 375
           PG + V Q  RR   E++  I++EV +LL A FI E+ +P WLAN V+V KANGK  MC+
Sbjct: 788 PGARPVRQKVRRQAPERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCI 847

Query: 376 DYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTAR 435
           DYTDLNKACPKD YPLP ID++VD  +  +LL  +DAYSGYHQI+M   D++KTAF+T  
Sbjct: 848 DYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPV 907

Query: 436 ANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAF 495
             Y Y +MPFGLKN G T+QR        Q+GRN+E YV D++VK+  +     +L E F
Sbjct: 908 GTYCYTSMPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDDLVVKTRNQETLLSDLAETF 967

Query: 496 GRLRKHNMRLN 506
             LR   ++LN
Sbjct: 968 ESLRSARIKLN 978


>UniRef100_Q7XS00 OSJNBb0002N06.6 protein [Oryza sativa]
          Length = 1607

 Score =  264 bits (674), Expect = 9e-69
 Identities = 178/477 (37%), Positives = 257/477 (53%), Gaps = 34/477 (7%)

Query: 38   RKRYVRAVNAVTEVPFG---FLHPDITISSADFFGVEQHLYDPIVVLLRINQFNVQRVLL 94
            +K  +R V+ +T V  G   +L+  I+    D  GV     DP+V+   I  F V+R+L+
Sbjct: 650  KKMQIRMVHNITLVGEGAPQYLNQLISFGPEDAEGVMFLHQDPLVISAEIAGFEVRRILV 709

Query: 95   DQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRGILDLDTTFCERENIKML 154
            D GSSAD+I+ +A+ ++GL  +  T    SL GF GE V V     L   F   EN +  
Sbjct: 710  DGGSSADVIFAEAYAKMGLPTQAFTLAPASLRGFGGETVQVLSQALLLIAFGSGENRREE 769

Query: 155  KVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASGRIGRISVDQKIARKCYC 214
            ++ + V+    +YN I GR TLN+  A+   +H     L   G IG I V  K  +    
Sbjct: 770  QILFDVVDIPYNYNAIFGRATLNKFEAI---SHHNYLKLKMPGPIGVIVV--KGLQPSAA 824

Query: 215  NAIDRYGRKSALTGHRCHEVNV-PEENLDSRGEGRVNRPTPIEETKELKFGD----KVLK 269
            +  D      A+     H V   P E           +PTP  +  +++  D    K++ 
Sbjct: 825  SKGDL-----AIINRAVHSVETEPHER-----PKHTPKPTPHGKITKVQIDDADPTKLVS 874

Query: 270  IGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALDPGIKLVTQTRRRMG 329
            +G    +  E+ +  +LE        S  ++ G+  + I H LA+ P IK   Q  R+M 
Sbjct: 875  LGG---DKGEEEVESILE--------SPDEVGGVPADLIMHHLAVKPDIKPRKQKLRKMS 923

Query: 330  DEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCVDYTDLNKACPKDSY 389
             ++++ ++ EV KLL A  I EI +P WLAN V+V+K+NGK  MCVD+TDLNKACPKD +
Sbjct: 924  TDRQEAVKAEVQKLLRAGVIQEIDHPEWLANPVLVRKSNGKWRMCVDFTDLNKACPKDDF 983

Query: 390  PLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTARANYSYQTMPFGLKN 449
            PLP ID+LVD  +  EL+S +DAYS YHQI M+  D  KT F+T    + +  MPFGL+N
Sbjct: 984  PLPQIDQLVDSTAGCELMSFLDAYSSYHQIHMNLLDIPKTFFITPFGTFCHLRMPFGLRN 1043

Query: 450  TGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAFGRLRKHNMRLN 506
             GAT+ RL+ +V   Q+GRN+E YV D++VKS    N   +L E F  LR   +RLN
Sbjct: 1044 AGATFARLVYKVLGKQLGRNVEAYVDDIVVKSRKAFNQAIDLQETFDSLRTAGIRLN 1100


>UniRef100_Q7XL85 OSJNBb0014D23.4 protein [Oryza sativa]
          Length = 1684

 Score =  264 bits (674), Expect = 9e-69
 Identities = 162/429 (37%), Positives = 224/429 (51%), Gaps = 28/429 (6%)

Query: 78   IVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRG 137
            +VV   +    + RVL+D G++ +I+   AFD +      L P +  ++G      W  G
Sbjct: 613  MVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPLG 671

Query: 138  ILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASG 197
             +DL  TF    N +  +V + V      YN ++GR  L +  AV+  A+  +K     G
Sbjct: 672  HIDLPVTFGGSANFRTERVDFDVADLSLPYNAVLGRPALVKFMAVVHYAYLQMKMPGPGG 731

Query: 198  RIGRISVDQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNRPTPIEE 257
             I  +  D K+A  C     D     S   G                G+ R++   P   
Sbjct: 732  PI-TVHGDLKVALACMEQRADHLAVASKPVG----------------GDERLSTSVPAAP 774

Query: 258  TKELKFGDKVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALDPG 317
             + +   D+V           E  L   L  N D+FAW   DM G+    I HRLA+ PG
Sbjct: 775  RRRMVTCDEV----------PEDALVSFLRANADVFAWRPADMPGVPRVVIEHRLAVRPG 824

Query: 318  IKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCVDY 377
             + V Q  RR G E++  I++EV +LL A FI E+ +P WLAN V+V KANGK  MC+DY
Sbjct: 825  ARPVRQKVRRQGPERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDY 884

Query: 378  TDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTARAN 437
            TDLNKACPKD YPLP ID++VD  +  +LL  +DAYSGYHQI+M   D++KTAF+T    
Sbjct: 885  TDLNKACPKDPYPLPRIDRIVDSTAGCDLLCFLDAYSGYHQIRMARDDEEKTAFITPIGT 944

Query: 438  YSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAFGR 497
            Y Y TMPFGLKN G T+QR        Q+GRN+E YV D++VK+  +     +L E F  
Sbjct: 945  YCYTTMPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDDLVVKTRNQETLLSDLAETFES 1004

Query: 498  LRKHNMRLN 506
            LR   ++LN
Sbjct: 1005 LRSARIKLN 1013


>UniRef100_Q8S9T2 B1064G04.18 protein [Oryza sativa]
          Length = 2030

 Score =  264 bits (674), Expect = 9e-69
 Identities = 164/431 (38%), Positives = 225/431 (52%), Gaps = 29/431 (6%)

Query: 78   IVVLLRINQFNVQRVLLDQGSSADIIYGDAFDQLGLDERDLTPYTGSLVGFAGEQVWVRG 137
            +VV   I    + RVL+D G++ +I+   AFD +      L P +  ++G      W  G
Sbjct: 613  MVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQP-SQPIIGVTPGHTWPLG 671

Query: 138  ILDLDTTFCERENIKMLKVRYLVLRAMGSYNIIIGRNTLNRLCAVISTAHTAVKYLLASG 197
             +DL  TF    N +  +V + V      YN ++GR  L +  A +  A+  +K     G
Sbjct: 672  HIDLPVTFGGPANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKM---PG 728

Query: 198  RIGRISV--DQKIARKCYCNAIDRYGRKSALTGHRCHEVNVPEENLDSRGEGRVNRPTPI 255
              G ISV  D K+A  C     DR    S   G                G+ R+    P 
Sbjct: 729  PGGPISVHGDLKVALACMEQRADRLAAASKPEG----------------GDERLGPSAPT 772

Query: 256  EETKELKFGDKVLKIGTRLTESQEQRLSKLLEENLDLFAWSHKDMSGIDPNFICHRLALD 315
               + +   D+V          +E  L   L  N D+FAW   DM G+    I HRLA+ 
Sbjct: 773  APRQRMATCDEV-------PVKEEDALVSFLRANADVFAWRPADMPGVPREVIEHRLAVR 825

Query: 316  PGIKLVTQTRRRMGDEKEKVIQQEVNKLLAAEFI*EIKYPTWLANVVMVKKANGK*PMCV 375
            PG + V Q  RR   E++  I++EV +LL A FI E+ +P WLAN V+V KANGK  MC+
Sbjct: 826  PGARPVRQKVRRQAPERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCI 885

Query: 376  DYTDLNKACPKDSYPLPSIDKLVDGASNNELLSLMDAYSGYHQIKMHSSDKDKTAFMTAR 435
            DYTDLNKACPKD YPLP ID++VD  +  +LL  +DAYSGYHQI+M   D++KTAF+T  
Sbjct: 886  DYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPV 945

Query: 436  ANYSYQTMPFGLKNTGATYQRLMDRVFADQVGRNMEVYVGDMIVKSVLEANHHEELLEAF 495
              Y Y +MPFGLKN G T+QR        Q+GRN+E YV D++VK+  +     +L E F
Sbjct: 946  GTYCYTSMPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDDLVVKTRNQETLLSDLAETF 1005

Query: 496  GRLRKHNMRLN 506
              LR   ++LN
Sbjct: 1006 ENLRSARIKLN 1016


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.337    0.145    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,084,126,331
Number of Sequences: 2790947
Number of extensions: 42227470
Number of successful extensions: 165097
Number of sequences better than 10.0: 2964
Number of HSP's better than 10.0 without gapping: 1909
Number of HSP's successfully gapped in prelim test: 1055
Number of HSP's that attempted gapping in prelim test: 161176
Number of HSP's gapped (non-prelim): 3863
length of query: 764
length of database: 848,049,833
effective HSP length: 135
effective length of query: 629
effective length of database: 471,271,988
effective search space: 296430080452
effective search space used: 296430080452
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 79 (35.0 bits)