BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0348.12
         (180 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9LTI9 Arabidopsis thaliana genomic DNA, chromosome 5,...   120  1e-26
UniRef100_Q8LDH1 Hypothetical protein [Arabidopsis thaliana]          118  8e-26
UniRef100_Q94HI8 Hypothetical protein [Oryza sativa]                  106  3e-22
UniRef100_Q93V65 AT5g59400/f2o15_60 [Arabidopsis thaliana]             86  4e-16
UniRef100_Q65XV9 Hypothetical protein P0016H04.9 [Oryza sativa]        79  7e-14
UniRef100_UPI0000311342 UPI0000311342 UniRef100 entry                  35  0.68
UniRef100_UPI0000328D76 UPI0000328D76 UniRef100 entry                  35  0.89
UniRef100_Q66736 Envelope protein [Equine infectious anemia virus]     34  1.5
UniRef100_Q8FR43 Hypothetical protein [Corynebacterium efficiens]      33  3.4
UniRef100_Q9FAA8 ORF-Y [Geobacillus thermoleovorans]                   32  9.9

>UniRef100_Q9LTI9 Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15
           [Arabidopsis thaliana]
          Length = 282

 Score =  120 bits (302), Expect = 1e-26
 Identities = 67/136 (49%), Positives = 85/136 (62%), Gaps = 9/136 (6%)

Query: 49  WLGSRSDV*YPRCSIRRQSTYADAEGRRIYLWFLH*QAWALFLAFGSLACLGPLSYAVGI 108
           W GS+S V YPRCS+ RQSTYADAE     +  L    W +   FGS AC+ P  Y VG+
Sbjct: 106 WYGSKSVVKYPRCSLLRQSTYADAEDDASQVLLLA-TVWIMIFLFGSSACVLPTIYGVGL 164

Query: 109 AYQ-NAFGSGLSHGSHNPGLGFSIIV----NNIIFIVLGFVIGYPLASAPVKVIQGLWRN 163
            Y  + F SGL + S    L  S+ +    N I+  VLG   GYP+AS+ V+V++GLWRN
Sbjct: 165 VYGGDPFDSGLVYSSQ---LSSSVPILSKFNGILLSVLGPAFGYPIASSAVRVLKGLWRN 221

Query: 164 DLVALRGACPNCGEEL 179
           DL AL+G CPNCGEE+
Sbjct: 222 DLTALKGDCPNCGEEV 237


>UniRef100_Q8LDH1 Hypothetical protein [Arabidopsis thaliana]
          Length = 299

 Score =  118 bits (295), Expect = 8e-26
 Identities = 65/136 (47%), Positives = 84/136 (60%), Gaps = 9/136 (6%)

Query: 49  WLGSRSDV*YPRCSIRRQSTYADAEGRRIYLWFLH*QAWALFLAFGSLACLGPLSYAVGI 108
           W GS+S V YPRCS+ RQSTYADAE     +  L    W +   FGS AC+ P  Y VG+
Sbjct: 106 WYGSKSVVKYPRCSLLRQSTYADAEDDASQVLLLA-TVWIMIFLFGSSACVLPTIYGVGL 164

Query: 109 AYQ-NAFGSGLSHGSHNPGLGFSIIV----NNIIFIVLGFVIGYPLASAPVKVIQGLWRN 163
            Y  + F SGL + +    L  S+ +    N I+  VLG   GYP+AS+ V+ ++GLWRN
Sbjct: 165 VYGGDPFDSGLVYSNQ---LSSSVPILSKFNGILLSVLGPAFGYPIASSAVRALKGLWRN 221

Query: 164 DLVALRGACPNCGEEL 179
           DL AL+G CPNCGEE+
Sbjct: 222 DLTALKGDCPNCGEEV 237


>UniRef100_Q94HI8 Hypothetical protein [Oryza sativa]
          Length = 272

 Score =  106 bits (264), Expect = 3e-22
 Identities = 61/132 (46%), Positives = 87/132 (65%), Gaps = 8/132 (6%)

Query: 51  GSRSDV*YPRCSIRRQSTYADAEGRRIYLWFLH*QAWALFLAFGSLACLGPLSYAVGIAY 110
           GS S V YPRCS++RQSTYADAE  +     L    W L L FG+ A L P    + + +
Sbjct: 83  GSPSVVKYPRCSLKRQSTYADAEEDKSMFMALS-SIWMLLLLFGTSAFLVPSLCILSLTF 141

Query: 111 QNAFGSG-LSHGSHNPGLGFSII--VNNIIFIVLGFVIGYPLASAPVKVIQGLWRNDLVA 167
            +AFG+  L +G+ +    F +I  VN+++ I LG++IGYP++SA V  +QGL  N+LVA
Sbjct: 142 GDAFGARYLLYGAKS----FDVITRVNDMVLIGLGYLIGYPISSASVGALQGLLTNNLVA 197

Query: 168 LRGACPNCGEEL 179
           L+G+CPNCGE++
Sbjct: 198 LKGSCPNCGEQV 209


>UniRef100_Q93V65 AT5g59400/f2o15_60 [Arabidopsis thaliana]
          Length = 157

 Score = 85.9 bits (211), Expect = 4e-16
 Identities = 46/96 (47%), Positives = 61/96 (62%), Gaps = 8/96 (8%)

Query: 89  LFLAFGSLACLGPLSYAVGIAYQ-NAFGSGLSHGSHNPGLGFSIIV----NNIIFIVLGF 143
           +   FGS AC+ P  Y VG+ Y  + F SGL + S    L  S+ +    N I+  VLG 
Sbjct: 1   MIFLFGSSACVLPTIYGVGLVYGGDPFDSGLVYSSQ---LSSSVPILSKFNGILLSVLGP 57

Query: 144 VIGYPLASAPVKVIQGLWRNDLVALRGACPNCGEEL 179
             GYP+AS+ V+V++GLWRNDL AL+G CPNCGEE+
Sbjct: 58  AFGYPIASSAVRVLKGLWRNDLTALKGDCPNCGEEV 93


>UniRef100_Q65XV9 Hypothetical protein P0016H04.9 [Oryza sativa]
          Length = 163

 Score = 78.6 bits (192), Expect = 7e-14
 Identities = 42/96 (43%), Positives = 65/96 (66%), Gaps = 7/96 (7%)

Query: 87  WALFLAFGSLACLGPLSYAVGIAYQNAFGSG-LSHGSHNPGLGFSII--VNNIIFIVLGF 143
           W L L FG+ A L P    + + + +AFG+  L +G+ +    F +I  VN+++ I LG+
Sbjct: 9   WMLLLLFGTSAFLVPSLCILSLTFGDAFGARYLLYGAKS----FDVITRVNDMVLIGLGY 64

Query: 144 VIGYPLASAPVKVIQGLWRNDLVALRGACPNCGEEL 179
           +IGYP++SA V  +QGL  N+LVAL+G+CPNCGE++
Sbjct: 65  LIGYPISSASVGALQGLLTNNLVALKGSCPNCGEQV 100


>UniRef100_UPI0000311342 UPI0000311342 UniRef100 entry
          Length = 153

 Score = 35.4 bits (80), Expect = 0.68
 Identities = 36/124 (29%), Positives = 50/124 (40%), Gaps = 36/124 (29%)

Query: 59  PRCSIRRQSTYADA---EGRRIYLWFLH*QAWALFLAFGSLACLGPLSYAVGIAYQNAFG 115
           PRCS+R ++TY+D    EG          Q WAL+ ++     LG  +  V +A  + FG
Sbjct: 1   PRCSVRGEATYSDCVVDEG----------QMWALWTSY-----LGVFAIGVSLAVFD-FG 44

Query: 116 SGL--SHGSHNPGLGFSIIVNNIIFIVLGFVIGYPLASAPVKVIQGLWRNDLVALRGACP 173
             L  S G+  P LG               V G  LA      +        +A+ G CP
Sbjct: 45  GALDPSEGARAPVLG---------------VAGCALARRGWDKLAQTMEGSTLAMTGECP 89

Query: 174 NCGE 177
            C E
Sbjct: 90  ACHE 93


>UniRef100_UPI0000328D76 UPI0000328D76 UniRef100 entry
          Length = 217

 Score = 35.0 bits (79), Expect = 0.89
 Identities = 22/92 (23%), Positives = 41/92 (43%)

Query: 85  QAWALFLAFGSLACLGPLSYAVGIAYQNAFGSGLSHGSHNPGLGFSIIVNNIIFIVLGFV 144
           Q+  ++  FG     GPL   + +  +N++   ++      GL  +I+++  I+   G V
Sbjct: 16  QSSEVYGGFGGCWDYGPLGVELKLNIKNSWWRSMTFREDIVGLDSTILMHPDIWKASGHV 75

Query: 145 IGYPLASAPVKVIQGLWRNDLVALRGACPNCG 176
            G+       K  +  +R D + L   CP CG
Sbjct: 76  DGFSDPLVDCKQCKERFREDQIDLNAPCPKCG 107


>UniRef100_Q66736 Envelope protein [Equine infectious anemia virus]
          Length = 595

 Score = 34.3 bits (77), Expect = 1.5
 Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 7/51 (13%)

Query: 114 FGSGL-SH-GSHNPGLGFSIIVNNIIFIVLGFVIGYPLASAPVKVIQGLWR 162
           FG  L SH  + NPGLG SII   ++F+++     Y L ++P K+++ LW+
Sbjct: 344 FGKDLWSHIANWNPGLGASIIKYIVVFLLI-----YLLLTSPPKILRALWK 389


>UniRef100_Q8FR43 Hypothetical protein [Corynebacterium efficiens]
          Length = 149

 Score = 33.1 bits (74), Expect = 3.4
 Identities = 32/104 (30%), Positives = 46/104 (43%), Gaps = 26/104 (25%)

Query: 79  LWFLH*QAWAL--FLAFGSLACLGPLSYAVGIA-YQNA------FGSGLSHGSHNPGLGF 129
           +W L    W    ++ FG LAC+  ++   GIA ++ A      FG  +   +H  G G 
Sbjct: 20  IWLLFGGIWLALGYVLFGILACILIITIPAGIASFRMANYALWPFGRTVVRKTHG-GNGL 78

Query: 130 SIIVNNIIFIVLGF----------------VIGYPLASAPVKVI 157
           S I N I FI+ G                 +IG PLA A +K+I
Sbjct: 79  SAISNFIWFIIAGLWLAIGHITTAAAQAITIIGIPLAIANIKMI 122


>UniRef100_Q9FAA8 ORF-Y [Geobacillus thermoleovorans]
          Length = 343

 Score = 31.6 bits (70), Expect = 9.9
 Identities = 20/67 (29%), Positives = 32/67 (46%), Gaps = 1/67 (1%)

Query: 99  LGPL-SYAVGIAYQNAFGSGLSHGSHNPGLGFSIIVNNIIFIVLGFVIGYPLASAPVKVI 157
           +GPL SYA+G     A G   +   H P LG  +++   IF+++  +  +P+   P K  
Sbjct: 255 VGPLLSYALGWILPCAVGFLFAANRHRPVLGSVLVMIGAIFVLIVGISVFPMLLLPRKRA 314

Query: 158 QGLWRND 164
              W  D
Sbjct: 315 HVGWAGD 321


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.340    0.149    0.512 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 288,123,278
Number of Sequences: 2790947
Number of extensions: 10850903
Number of successful extensions: 32839
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 32824
Number of HSP's gapped (non-prelim): 10
length of query: 180
length of database: 848,049,833
effective HSP length: 119
effective length of query: 61
effective length of database: 515,927,140
effective search space: 31471555540
effective search space used: 31471555540
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 70 (31.6 bits)