BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0346.14
         (1622 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q84VH8 Gag-pol polyprotein [Glycine max]                    877  0.0
UniRef100_Q84VI4 Gag-pol polyprotein [Glycine max]                    874  0.0
UniRef100_Q84VI2 Gag-pol polyprotein [Glycine max]                    870  0.0
UniRef100_Q84VH6 Gag-pol polyprotein [Glycine max]                    867  0.0
UniRef100_O65147 Gag-pol polyprotein [Glycine max]                    860  0.0
UniRef100_Q84VI0 Gag-pol polyprotein [Glycine max]                    855  0.0
UniRef100_Q850V9 Putative polyprotein [Oryza sativa]                  855  0.0
UniRef100_Q8VY36 Opie2a pol [Zea mays]                                843  0.0
UniRef100_Q9C5V1 Gag/pol polyprotein [Arabidopsis thaliana]           842  0.0
UniRef100_Q8H851 Putative Zea mays retrotransposon Opie-2 [Oryza...   837  0.0
UniRef100_Q852C7 Putative gag-pol polyprotein [Oryza sativa]          834  0.0
UniRef100_Q8H7T1 Putative Zea mays retrotransposon Opie-2 [Oryza...   833  0.0
UniRef100_Q7XPI7 OSJNBb0004A17.2 protein [Oryza sativa]               833  0.0
UniRef100_Q60DR2 Putative polyprotein [Oryza sativa]                  832  0.0
UniRef100_Q7XP45 OSJNBa0063G07.6 protein [Oryza sativa]               823  0.0
UniRef100_Q7XET2 Hypothetical protein [Oryza sativa]                  817  0.0
UniRef100_Q7XBD2 Retrotransposon Opie-2 [Zea mays]                    754  0.0
UniRef100_Q75LG0 Putative integrase [Oryza sativa]                    749  0.0
UniRef100_Q8W0X4 Putative pol protein [Zea mays]                      749  0.0
UniRef100_Q9SXB2 T28P6.8 protein [Arabidopsis thaliana]               672  0.0

>UniRef100_Q84VH8 Gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  877 bits (2265), Expect = 0.0
 Identities = 432/880 (49%), Positives = 599/880 (67%), Gaps = 5/880 (0%)

Query: 728  CLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPF 787
            CL S  +E  + H+R GH  +R + ++     VRG+P LK     +C  CQ GK  K+  
Sbjct: 681  CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSH 740

Query: 788  KAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVF 847
            +     +TSR LELLH+DL GP++ ES+GGKRY  V+VDD+SR+TWV F+  K E+  VF
Sbjct: 741  QKLRHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSETFEVF 800

Query: 848  STFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKN 907
                 ++Q EK C I R+RSDHG EFEN +F     S GI H+FS   TPQQNG+VERKN
Sbjct: 801  KELSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKN 860

Query: 908  RTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFH 967
            RTLQE AR ML    +  + WAE +NTACYI NR+++RR    T YE+WK  KP++ +FH
Sbjct: 861  RTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFH 920

Query: 968  SFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLD 1027
             FG  CY+L  +++  K D KS   + LGYS  S+ +R +N+  +T+ ESI+V  DD   
Sbjct: 921  IFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSP 980

Query: 1028 SDQSKLVEKFADLSISVSDKGKALEEAEPEEDDPEEAGPSDSQPRKKSRIIASHPKELIL 1087
            + +  + E    L  +V+D  K+ E AE  +   +E+  +    R  +RI   HPKELI+
Sbjct: 981  ARKKDVEEDVRTLGDNVADAAKSGENAENSDSATDESNINQPDKRSSTRIQKMHPKELII 1040

Query: 1088 GNKDEPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKNDV 1147
            G+ +  V TRS     E  ++S    VS IEPK++ EAL D+ WI AM+EE+ +F +N+V
Sbjct: 1041 GDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEV 1096

Query: 1148 WSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLE 1207
            W LV +P+  +VIGTKW+F+NK NE+G + RNKARLVA+GY+Q EG+D+ ETF PVARLE
Sbjct: 1097 WELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLE 1156

Query: 1208 AIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYG 1267
            +IRLL+  +      L+QMDVKSAFLNGY++EEVYV QP GF D  +PDHV++LKK+LYG
Sbjct: 1157 SIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYG 1216

Query: 1268 LKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCK 1327
            LKQAPRAWYERL+ FL +  + +G +D TLF K   ++++I QIYVD I+FG  +  + +
Sbjct: 1217 LKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLR 1276

Query: 1328 EFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKTPM 1387
             F + MQ+EFEMS++GEL YFLG+QV Q  +  ++ QS+Y K ++KKF M  ++  +TP 
Sbjct: 1277 HFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPA 1336

Query: 1388 HPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTAVK 1447
                 L K++A   V Q LYR MIGSLLYLTASRPD  ++V +CAR+Q++P+ +HLT VK
Sbjct: 1337 PTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVK 1396

Query: 1448 RILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKR 1507
            RIL+Y+ GT++ G+MY   S   L GYCD D+AG    RKST G C +LG+NL+SW SK+
Sbjct: 1397 RILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKK 1456

Query: 1508 QSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHS 1567
            Q+ + LSTA+AEYI+A    +Q++WMK  L++Y + +  + +YCDN +AI++SKNP+ HS
Sbjct: 1457 QNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHS 1516

Query: 1568 RAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY-KAL 1606
            R KHI++++H+IRD V   V+ LK VDT+ + ADI+ KAL
Sbjct: 1517 RTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKAL 1556



 Score =  154 bits (388), Expect = 3e-35
 Identities = 127/468 (27%), Positives = 205/468 (43%), Gaps = 64/468 (13%)

Query: 12  KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERP--VDAEGKKI----PRSEMTA 65
           +PP+ DG  +EYWK R+ +F    D+  W  ++ G+E P  +D EGK      P  + T 
Sbjct: 12  RPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTK 71

Query: 66  EQKKLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLI 125
           E+ +L   + KA   L + +    ++ I     A   +E LK++HEG  KVK S+   L 
Sbjct: 72  EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKMSRLQLLA 131

Query: 126 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIE 185
            K+E+  M+  E I +       +      L +  T +  V +++RSLP+ +   VT+IE
Sbjct: 132 TKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIE 191

Query: 186 LTRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESE 245
             +D+  M ++ELI  L+  EL  S+  + + K++A  S                 +E E
Sbjct: 192 EAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSN----------------DEGE 235

Query: 246 EASEDSDEDE-----LTLISKRLNHIWK--------HKQSKYRGSGKAKGKSESSGQKKS 292
           E   D D DE     + L+ K+ N +          H Q+      K     + S  K S
Sbjct: 236 EDEYDLDTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRSDVKPS 295

Query: 293 SIKEVTCFECKESGHYKSDCPKLKKDKRPKKHFKTKKSLMVTFDESESE-DVDSDGEVQG 351
             K + C  C+  GH  ++CP        KKH   +K L V   ++ESE + DSD +V  
Sbjct: 296 HSKGIQCHGCEGYGHIIAECP-----THLKKH---RKGLSVCQSDTESEQESDSDRDVNA 347

Query: 352 LMTIVKDKEAESKEVPDSDSASEEDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLTK 411
           L  I +  E                 +SD ++E+    +  EL  +   +  K   +L +
Sbjct: 348 LTGIFETAE----------------DSSDTDSEI----TFDELAASYRKLCIKSEKILQQ 387

Query: 412 HKKLKKDFSAASKTPSEHEKIISELKNDNHALVNSNSVLKNQIANLEE 459
             +LKK  +        HE+ ISELK +   L +    +K  I  L +
Sbjct: 388 EAQLKKVIADLEAEKEAHEEEISELKGEVGFLNSKLETMKKSIKMLNK 435


>UniRef100_Q84VI4 Gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  874 bits (2258), Expect = 0.0
 Identities = 431/880 (48%), Positives = 598/880 (66%), Gaps = 5/880 (0%)

Query: 728  CLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPF 787
            CL S  +E  + H+R GH  +R + ++     VRG+P LK     +C  CQ GK  K+  
Sbjct: 679  CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSH 738

Query: 788  KAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVF 847
            +     +TSR LELLH+DL GP++ ES+GGKRY  V+VDD+SR+TWVKF+  K E+  VF
Sbjct: 739  QKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVKFIREKSETFEVF 798

Query: 848  STFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKN 907
                 ++Q EK C I R+RSDHG EFEN +      S GI H+FS   TPQQNG+VERKN
Sbjct: 799  KELSLRLQREKDCVIKRIRSDHGREFENSRLTEFCTSEGITHEFSAAITPQQNGIVERKN 858

Query: 908  RTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFH 967
            RTLQE AR ML    +  + WAE +NTACYI NR+++RR    T YE+WK  KP++ +FH
Sbjct: 859  RTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFH 918

Query: 968  SFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLD 1027
             FG  CY+L  +++  K D KS   + LGYS  S+ +R +N+  +T+ ESI+V  DD   
Sbjct: 919  IFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSP 978

Query: 1028 SDQSKLVEKFADLSISVSDKGKALEEAEPEEDDPEEAGPSDSQPRKKSRIIASHPKELIL 1087
            + +  + E       +V+D  K+ E AE  +   +E+  +    R  +RI   HPKELI+
Sbjct: 979  ARKKDVEEDVRTSGDNVADAAKSGENAENSDSATDESNINQPDKRSSTRIQKMHPKELII 1038

Query: 1088 GNKDEPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKNDV 1147
            G+ +  V TRS     E  ++S    VS IEPK++ EAL D+ WI AM+EE+ +F +N+V
Sbjct: 1039 GDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEV 1094

Query: 1148 WSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLE 1207
            W LV +P+  +VIGTKW+F+NK NE+G + RNKARLVA+GY+Q EG+D+ ETF PVARLE
Sbjct: 1095 WELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLE 1154

Query: 1208 AIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYG 1267
            +IRLL+  +      L+QMDVKSAFLNGY++EEVYV QP GF D  +PDHV++LKK+LYG
Sbjct: 1155 SIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYG 1214

Query: 1268 LKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCK 1327
            LKQAPRAWYERL+ FL +  + +G +D TLF K   ++++I QIYVD I+FG  +  + +
Sbjct: 1215 LKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLR 1274

Query: 1328 EFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKTPM 1387
             F + MQ+EFEMS++GEL YFLG+QV Q  +  ++ QS+Y K ++KKF M  ++  +TP 
Sbjct: 1275 HFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPA 1334

Query: 1388 HPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTAVK 1447
                 L K++A   V Q LYR MIGSLLYLTASRPD  ++V +CAR+Q++P+ +HLT VK
Sbjct: 1335 PTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVK 1394

Query: 1448 RILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKR 1507
            RIL+Y+ GT++ G+MY   S   L GYCD D+AG    RKST G C +LG+NL+SW SK+
Sbjct: 1395 RILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKK 1454

Query: 1508 QSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHS 1567
            Q+ + LSTA+AEYI+A    +Q++WMK  L++Y + +  + +YCDN +AI++SKNP+ HS
Sbjct: 1455 QNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHS 1514

Query: 1568 RAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY-KAL 1606
            R KHI++++H+IRD V   V+ LK VDT+ + ADI+ KAL
Sbjct: 1515 RTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKAL 1554



 Score =  151 bits (382), Expect = 1e-34
 Identities = 124/462 (26%), Positives = 206/462 (43%), Gaps = 57/462 (12%)

Query: 12  KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERP--VDAEGKKI----PRSEMTA 65
           +PP+ DG  +EYWK R+ +F    D+  W  ++ G+E P  +D EGK      P  + T 
Sbjct: 12  RPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTK 71

Query: 66  EQKKLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLI 125
           E+ +L   + KA   L + +    ++ I     A   +E LK++HEG  KVK S+   L 
Sbjct: 72  EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKISRLQLLA 131

Query: 126 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIE 185
            K+E+  M+  E I +       +      L +  T +  V +++RSLP+ +   VT+IE
Sbjct: 132 TKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIE 191

Query: 186 LTRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESE 245
             +D+  M ++ELI  L+  EL  S+  + + K++A  S  E            E +E +
Sbjct: 192 EAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDE-----------GEEDEYD 240

Query: 246 EASEDSDEDELTLISKRLNHIWK--------HKQSKYRGSGKAKGKSESSGQKKSSIKEV 297
             +++   + + L+ K+ N +          H Q+      K     + S  K S  K +
Sbjct: 241 LNTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKKSDVKPSHSKGI 300

Query: 298 TCFECKESGHYKSDCPKLKKDKRPKKHFKTKKSLMVTFDESESE-DVDSDGEVQGLMTIV 356
            C  C+  GH  ++CP        KKH   +K L V   ++ESE + DSD +V  L  I 
Sbjct: 301 QCHGCEGYGHIIAECP-----THLKKH---RKGLSVCQSDTESEQESDSDRDVNALTGIF 352

Query: 357 KDKEAESKEVPDSDSASEEDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLTKHKKLK 416
           +               + ED +  D    F   +TS  K  +     K   +L +  +LK
Sbjct: 353 E---------------TAEDSSDTDSEITFDELATSYRKLCI-----KSEKILQQEAQLK 392

Query: 417 KDFSAASKTPSEHEKIISELKNDNHALVNSNSVLKNQIANLE 458
           K  +        H++ ISELK +   L   NS L+N   +++
Sbjct: 393 KVIADLEAEKEAHKEEISELKGEVGFL---NSKLENMTKSIK 431


>UniRef100_Q84VI2 Gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  870 bits (2247), Expect = 0.0
 Identities = 429/880 (48%), Positives = 597/880 (67%), Gaps = 5/880 (0%)

Query: 728  CLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPF 787
            CL S  +E  + H+R GH  +R + ++   + VRG+P LK     +C  CQ GK  K+  
Sbjct: 681  CLSSKEDEVRIWHQRFGHLHLRGMKKILDKSAVRGIPNLKIEEGRICGECQIGKQVKMSH 740

Query: 788  KAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVF 847
            +     +TSR LELLH+DL GP++ ES+GGKRY  V+VDD+SR+TWV F+  K  +  VF
Sbjct: 741  QKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSGTFEVF 800

Query: 848  STFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKN 907
                 ++Q EK C I R+RSDHG EFEN +F     S GI H+FS   TPQQNG+VERKN
Sbjct: 801  KKLSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKN 860

Query: 908  RTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFH 967
            RTLQE AR ML    +  + WAE +NTACYI NR+++RR    T YE+WK  KP++ +FH
Sbjct: 861  RTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFH 920

Query: 968  SFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLD 1027
             FG  CY+L  +++  K D KS   + LGYS  S+ +R +N+  +T+ ESI+V  DD   
Sbjct: 921  IFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSP 980

Query: 1028 SDQSKLVEKFADLSISVSDKGKALEEAEPEEDDPEEAGPSDSQPRKKSRIIASHPKELIL 1087
            + +  + E       +V+D  K+ E AE  +   +E+  +    R  +RI   HPKELI+
Sbjct: 981  ARKKDVEEDVRTSGDNVADAAKSGENAENSDSATDESNINQPDKRSSTRIQKMHPKELII 1040

Query: 1088 GNKDEPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKNDV 1147
            G+ +  V TRS     E  ++S    VS IEPK++ EAL D+ WI AM+EE+ +F +N+V
Sbjct: 1041 GDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEV 1096

Query: 1148 WSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLE 1207
            W LV +P+  +VIGTKW+F+NK NE+G + RNKARLVA+GY+Q EG+D+ ETF PVARLE
Sbjct: 1097 WELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLE 1156

Query: 1208 AIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYG 1267
            +IRLL+  +      L+QMDVKSAFLNGY++EEVYV QP GF D  +PDHV++LKK+LYG
Sbjct: 1157 SIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYG 1216

Query: 1268 LKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCK 1327
            LKQAPRAWYERL+ FL +  + +G +D TLF K   ++++I QIYVD I+FG  +  + +
Sbjct: 1217 LKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLR 1276

Query: 1328 EFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKTPM 1387
             F + MQ+EFEMS++GEL YFLG+QV Q  +  ++ QS+Y K ++KKF M  ++  +TP 
Sbjct: 1277 HFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPA 1336

Query: 1388 HPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTAVK 1447
                 L K++A   V QK YR MIGSLLYLTASRPD  ++V +CAR+Q++P+ +HL  VK
Sbjct: 1337 PTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVK 1396

Query: 1448 RILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKR 1507
            RIL+Y+ GT++ G+MY   S   L GYCD D+AG    RKST G C +LG+NL+SW SK+
Sbjct: 1397 RILKYVNGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKK 1456

Query: 1508 QSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHS 1567
            Q+ + LSTA+AEYI+A    +Q++WMK  L++Y + +  + +YCDN +AI++SKNP+ HS
Sbjct: 1457 QNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHS 1516

Query: 1568 RAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY-KAL 1606
            R KHI++++H+IRD V   V+ LK VDT+ + ADI+ KAL
Sbjct: 1517 RTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKAL 1556



 Score =  150 bits (380), Expect = 2e-34
 Identities = 127/467 (27%), Positives = 206/467 (43%), Gaps = 67/467 (14%)

Query: 12  KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERP--VDAEGKKI----PRSEMTA 65
           +PP+ DG  +EYWK R+ +F    D+  W  ++ G+E P  +D EGK      P  + T 
Sbjct: 12  RPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTK 71

Query: 66  EQKKLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLI 125
           E+ +L   + KA   L + +    ++ I     A    E LK +HEG  KVK S+   L 
Sbjct: 72  EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDACEILKSTHEGTSKVKMSRLQLLA 131

Query: 126 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIE 185
            K+E+  M+  E I +       +      L +  T +  V +++RSLP+ +   VT+IE
Sbjct: 132 TKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIE 191

Query: 186 LTRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESE 245
             +D+  M ++ELI  L+  EL  S+  + + K++A  S                 +E E
Sbjct: 192 EAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSN----------------DEGE 235

Query: 246 EASEDSDEDE-----LTLISKRLNHIWK--------HKQSKYRGSGKAKGKSESSGQKKS 292
           E   D D DE     + L+ K+ N +          H Q+      K     + S  K S
Sbjct: 236 EDEYDLDTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRSDVKPS 295

Query: 293 SIKEVTCFECKESGHYKSDCPKLKKDKRPKKHFKTKKSLMVTFDESESE-DVDSDGEVQG 351
             K + C  C+  GH  ++CP        KKH   +K L V   ++ESE + DSD +V  
Sbjct: 296 HSKGIQCHGCEGYGHIIAECP-----THLKKH---RKGLSVCQSDTESEQESDSDRDVNA 347

Query: 352 LMTIVKDKEAESKEVPDSDSASEEDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLTK 411
           L+ I +  E                 +SD ++E+    +  EL  +   +  K   +L +
Sbjct: 348 LIGIFETAE----------------DSSDTDSEI----TFDELAASYRKLCIKSEKILQQ 387

Query: 412 HKKLKKDFSAASKTPSEHEKIISELKNDNHALVNSNSVLKNQIANLE 458
             +LKK  +        H++ ISELK +   L   NS L+N   +++
Sbjct: 388 EAQLKKVIADLEAEKEAHKEEISELKGEVGFL---NSKLENMTKSIK 431


>UniRef100_Q84VH6 Gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  867 bits (2241), Expect = 0.0
 Identities = 428/880 (48%), Positives = 593/880 (66%), Gaps = 5/880 (0%)

Query: 728  CLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPF 787
            CL S  +E  + H+R GH  +R + ++     VRG+P LK     +C  CQ GK  K+  
Sbjct: 682  CLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSH 741

Query: 788  KAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVF 847
            +     +TSR LELLH+DL GP++ ES+GGKRY  V+VDD+SR+TWV F+  K ++  VF
Sbjct: 742  QKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFEVF 801

Query: 848  STFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKN 907
                 ++Q EK C I R+RSDHG EFEN KF     S GI H+FS   TPQQNG+VERKN
Sbjct: 802  KELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKN 861

Query: 908  RTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFH 967
            RTLQE AR ML    +  + WAE +NTACYI NR+++RR    T YE+WK  KP + +FH
Sbjct: 862  RTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFH 921

Query: 968  SFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLD 1027
             FG  CY+L  +++  K D KS   + LGYS  S+ +R +N+  +T+ ESI+V  DD   
Sbjct: 922  IFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTP 981

Query: 1028 SDQSKLVEKFADLSISVSDKGKALEEAEPEEDDPEEAGPSDSQPRKKSRIIASHPKELIL 1087
            + +  + E       +V+D  K+ E AE  +   +E   +    R   RI   HPKELI+
Sbjct: 982  ARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDEPNINQPDKRPSIRIQKMHPKELII 1041

Query: 1088 GNKDEPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKNDV 1147
            G+ +  V TRS     E  ++S    VS IEPK++ EAL D+ WI AM+EE+ +F +N+V
Sbjct: 1042 GDPNRGVTTRSR----EIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEV 1097

Query: 1148 WSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLE 1207
            W LV +P+  +VIGTKW+F+NK NE+G + RNKARLVA+GY+Q EG+D+ ETF PVARLE
Sbjct: 1098 WELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLE 1157

Query: 1208 AIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYG 1267
            +IRLL+  +      L+QMDVKSAFLNGY++EE YV QP GF D  +PDHV++LKK+LYG
Sbjct: 1158 SIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYG 1217

Query: 1268 LKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCK 1327
            LKQAPRAWYERL+ FL +  + +G +D TLF K   ++++I QIYVD I+FG  +  + +
Sbjct: 1218 LKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLR 1277

Query: 1328 EFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKTPM 1387
             F + MQ+EFEMS++GEL YFLG+QV Q  +  ++ QSKY K ++KKF M  ++  +TP 
Sbjct: 1278 HFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPA 1337

Query: 1388 HPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTAVK 1447
                 L K++A   V Q LYR MIGSLLYLTASRPD  ++V +CAR+Q++P+ +HL  VK
Sbjct: 1338 PTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVK 1397

Query: 1448 RILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKR 1507
            RIL+Y+ GT++ G+MY   S   L GYCD D+AG    RKST G C +LG+NL+SW SK+
Sbjct: 1398 RILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKK 1457

Query: 1508 QSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHS 1567
            Q+ + LSTA+AEYI+A    +Q++WMK  L++Y + +  + +YCDN +AI++SKNP+ HS
Sbjct: 1458 QNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHS 1517

Query: 1568 RAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY-KAL 1606
            R KHI++++H+IR+ V   V+ L+ VDT+ + ADI+ KAL
Sbjct: 1518 RTKHIDIRHHYIRELVDDKVITLEHVDTEEQIADIFTKAL 1557



 Score =  147 bits (371), Expect = 3e-33
 Identities = 124/468 (26%), Positives = 205/468 (43%), Gaps = 68/468 (14%)

Query: 12  KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERP--VDAEGKKI----PRSEMTA 65
           +PP+ DG  +EYWK R+ +F    D+  W  ++ G+E P  +D EGK      P  + T 
Sbjct: 12  RPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTK 71

Query: 66  EQKKLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLI 125
           E+ +L   + KA   L + +    ++ I     A   +E LK +HEG  KVK S+   L 
Sbjct: 72  EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLA 131

Query: 126 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIE 185
            K+E+  M+  E I +       +      L +  T +  V +++RSLP+ +   VT+IE
Sbjct: 132 TKFENLKMKEEECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIE 191

Query: 186 LTRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESE 245
             +D+  M ++ELI  L+  EL  S+  + + K++A  S                 +E E
Sbjct: 192 EAQDICNMRVDELIGSLQTFELGLSDRTEKKSKNLAFVSN----------------DEGE 235

Query: 246 EASEDSDEDE-----LTLISKRLNHIWK--------HKQSKYRGSGKAKGKSESSGQKKS 292
           E   D D DE     +  + K+ N +          H ++      K       S +K S
Sbjct: 236 EDEYDLDTDEGLTNAVVFLGKQFNKVLNRMDRRQKPHVRNISLDIRKGSEYQRKSDEKPS 295

Query: 293 SIKEVTCFECKESGHYKSDCPKLKKDKRPKKHFKTKKSLMV-TFDESESE-DVDSDGEVQ 350
             K + C  C+  GH K++CP   K        K +K L V   D++ESE + DSD +V 
Sbjct: 296 HSKGIQCRGCEGYGHIKAECPTHLK--------KQRKGLSVCRSDDTESEQESDSDRDVN 347

Query: 351 GLMTIVKDKEAESKEVPDSDSASEEDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLT 410
            L                +      + +SD ++E+    +  EL     ++  K   +L 
Sbjct: 348 AL----------------TGRFESAEDSSDTDSEI----TFDELAIFYRELCIKSEKILQ 387

Query: 411 KHKKLKKDFSAASKTPSEHEKIISELKNDNHALVNSNSVLKNQIANLE 458
           +  +LKK  +        HE+ IS+LK +   L   NS L+N   +++
Sbjct: 388 QEAQLKKVIANLEAEKEAHEEEISKLKGEVGFL---NSKLENMTKSIK 432


>UniRef100_O65147 Gag-pol polyprotein [Glycine max]
          Length = 1550

 Score =  860 bits (2222), Expect = 0.0
 Identities = 426/880 (48%), Positives = 590/880 (66%), Gaps = 5/880 (0%)

Query: 728  CLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPF 787
            CL S  +E  + H+R GH  +R + ++     VRG+P LK     +C  CQ GK  K+  
Sbjct: 655  CLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSN 714

Query: 788  KAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVF 847
            +     +TSR LELLH+DL GP++ ES+G KRY  V+VDD+SR+TWV F+  K ++  VF
Sbjct: 715  QKLQHQTTSRVLELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFTWVNFIREKSDTFEVF 774

Query: 848  STFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKN 907
                 ++Q EK C I R+RSDHG EFEN KF     S GI H+FS   TPQQNG+VERKN
Sbjct: 775  KELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKN 834

Query: 908  RTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFH 967
            RTLQE AR ML    +  + WAE +NTACYI NR+++RR    T YE+WK  KP + +FH
Sbjct: 835  RTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFH 894

Query: 968  SFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLD 1027
              G  CY+L  +++  K D KS   + LGYS  S+ +R +N+  +T+ ESI+V  DD   
Sbjct: 895  ICGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTP 954

Query: 1028 SDQSKLVEKFADLSISVSDKGKALEEAEPEEDDPEEAGPSDSQPRKKSRIIASHPKELIL 1087
            + +  + E       +V+D  K+ E AE  +   +E   +    R   RI   HPKELI+
Sbjct: 955  ARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDEPNINQPDKRPSIRIQKMHPKELII 1014

Query: 1088 GNKDEPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKNDV 1147
            G+ +  V TRS     E  ++S    VS IEPK++ EAL D+ WI AM+EE+ +F +N+V
Sbjct: 1015 GDPNRGVTTRSR----EIEIISNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEV 1070

Query: 1148 WSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLE 1207
            W LV +P+  +VIGTKW+F+NK NE+G + RNKARLVA+GY+Q EG+D+ ETF P ARLE
Sbjct: 1071 WELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPGARLE 1130

Query: 1208 AIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYG 1267
            +IRLL+  +      L+QMDVKSAFLNGY++EE YV QP GF D  +PDHV++LKK+LYG
Sbjct: 1131 SIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYG 1190

Query: 1268 LKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCK 1327
            LKQAPRAWYERL+ FL +  + +G +D TLF K   ++++I QIYVD I+FG  +  + +
Sbjct: 1191 LKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLR 1250

Query: 1328 EFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKTPM 1387
             F + MQ+EFEMS++GEL YFLG+QV Q  +  ++ QSKY K ++KKF M  ++  +TP 
Sbjct: 1251 HFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPA 1310

Query: 1388 HPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTAVK 1447
                 L K++A   V Q LYR MIGSLLYLTASRPD  ++V  CAR+Q++P+ +HL  VK
Sbjct: 1311 PTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGGCARYQANPKISHLNQVK 1370

Query: 1448 RILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKR 1507
            RIL+Y+ GT++ G+MY   S+  L GYCD D+AG    RKSTFG C +LG+N +SW SK+
Sbjct: 1371 RILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSVDDRKSTFGGCFYLGTNFISWFSKK 1430

Query: 1508 QSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHS 1567
            Q+ + LSTA+AEYI+A    +Q++WMK  L++Y + +  + +YCDN +AI++SKNP+ HS
Sbjct: 1431 QNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNLSAINISKNPVQHS 1490

Query: 1568 RAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY-KAL 1606
            R KHI++++H+IRD V   V+ L+ VDT+ + ADI+ KAL
Sbjct: 1491 RTKHIDIRHHYIRDLVDDKVITLEHVDTEEQIADIFTKAL 1530



 Score =  129 bits (324), Expect = 7e-28
 Identities = 117/450 (26%), Positives = 193/450 (42%), Gaps = 68/450 (15%)

Query: 30  SFFLGFDADLWDIIVDGYERP--VDAEGKKI----PRSEMTAEQKKLYAQHHKARAILLS 83
           +F    D+  W  ++ G+E P  +D EGK      P  + T E+ +L   + KA   L +
Sbjct: 3   AFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTKEEDELALGNSKALNALFN 62

Query: 84  AISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKYESFIMEPNESIEEMF 143
            +    ++ I     A   +E LK +HEG  KVK S+   L  K+E+  M+  E I E  
Sbjct: 63  GVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLATKFENLKMKEEECIHEFH 122

Query: 144 SRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIELTRDVERMSLEELISILK 203
                +      L +  T +  V +++RSLP+ +   VT+IE  +D+  M ++ELI  L+
Sbjct: 123 MNILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQ 182

Query: 204 CHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESEEASEDSDEDE-----LTL 258
             EL  S+  + + K++A  S                 +E EE   D D DE     + L
Sbjct: 183 TFELGLSDRTEKKSKNLAFVSN----------------DEGEEDEYDLDTDEGLTNAVVL 226

Query: 259 ISKRLNHIWKHKQSKYR--------GSGKAKGKSESSGQKKSSIKEVTCFECKESGHYKS 310
           + K+ N +      + +           K     + S +K S  K + C  C+  GH K+
Sbjct: 227 LGKQFNKVLNRMDRRQKPHVRNIPFDIRKGSEYQKRSDEKPSHSKGIQCHGCEGYGHIKA 286

Query: 311 DCPKLKKDKRPKKHFKTKKSLMV-TFDESESE-DVDSDGEVQGLMTIVKDKEAESKEVPD 368
           +CP   K        K +K L V   D++ESE + DSD +V  L                
Sbjct: 287 ECPTHLK--------KQRKGLSVCRSDDTESEQESDSDRDVNAL---------------- 322

Query: 369 SDSASEEDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLTKHKKLKKDFSAASKTPSE 428
           +      + +SD ++E+    +  EL  +  ++  K   +L +  +LKK  +        
Sbjct: 323 TGRFESAEDSSDTDSEI----TFDELAISYRELCIKSEKILQQEAQLKKVIANLEAEKEA 378

Query: 429 HEKIISELKNDNHALVNSNSVLKNQIANLE 458
           HE  ISELK +   L   NS L+N   +++
Sbjct: 379 HEDEISELKGEIGFL---NSKLENMTKSIK 405


>UniRef100_Q84VI0 Gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  855 bits (2210), Expect = 0.0
 Identities = 426/882 (48%), Positives = 592/882 (66%), Gaps = 9/882 (1%)

Query: 728  CLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPF 787
            CL S  +E  + H+R GH  +R + ++     VRG+P LK     +C  CQ GK  K+  
Sbjct: 681  CLSSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSH 740

Query: 788  KAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVF 847
            +     +TS  LELLH+DL GP++ ES+GGKRY  V+VDD+SR+TWV F+  K ++  VF
Sbjct: 741  QKLQHQTTSMVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFEVF 800

Query: 848  STFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKN 907
                 ++Q EK C I R+RSDHG EFEN KF     S GI H+FS   TPQQNG+VERKN
Sbjct: 801  KELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKN 860

Query: 908  RTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFH 967
            RTLQE  R ML    +  + WAE +NTACYI NR+++RR    T YE+WK  KP + +FH
Sbjct: 861  RTLQEATRVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFH 920

Query: 968  SFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLD 1027
             FG  CY+L  +++  K D KS   + LGYS  S+ +R +N+  +T+ ESI+V  DD   
Sbjct: 921  IFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTP 980

Query: 1028 SDQSKLVEKFADLSISVSDKGKALEEAEPEEDDPEEAGPSDSQPRKKS--RIIASHPKEL 1085
            + +  + E       +V+D  K+ E AE  +   +E  P+ +QP K    RI    PKEL
Sbjct: 981  ARKKDVEEDVRTSEDNVADTAKSAENAEKSDSTTDE--PNINQPDKSPFIRIQKMQPKEL 1038

Query: 1086 ILGNKDEPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKN 1145
            I+G+ +  V TRS     E  ++S    VS IEPK++ EAL D+ WI AM+EE+ +F +N
Sbjct: 1039 IIGDPNRGVTTRSR----EIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRN 1094

Query: 1146 DVWSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVAR 1205
            +VW LV +P+  +VIGTKW+F+NK NE+G + RNKARLVA+GY+Q EG+D+ ETF PVAR
Sbjct: 1095 EVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVAR 1154

Query: 1206 LEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSL 1265
            LE+IRLL+  +      L+QMDVKSAFLNGY++EE YV QP GF D  + DHV++LKK+L
Sbjct: 1155 LESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHLDHVYRLKKAL 1214

Query: 1266 YGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSL 1325
            YGLKQAPRAWYERL+ FL +  + +G +D TLF K   ++++I QIYVD I+FG  +  +
Sbjct: 1215 YGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEM 1274

Query: 1326 CKEFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKT 1385
             + F   MQ+EFEMS++GEL YFLG+QV Q  +  ++ QSKY K ++KKF M  ++  +T
Sbjct: 1275 LRHFVPQMQSEFEMSLVGELHYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRT 1334

Query: 1386 PMHPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTA 1445
            P      L K++A   V Q LYR MIGSLLYLTASRPD  F+V +CAR+Q++P+ +HL  
Sbjct: 1335 PAPTHLKLSKDEAGTSVDQNLYRSMIGSLLYLTASRPDITFAVGVCARYQANPKISHLNQ 1394

Query: 1446 VKRILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWAS 1505
            VKRIL+Y+ GT++ G+MY   S+  L GYCD D+AG    RK T G C +LG+NL+SW S
Sbjct: 1395 VKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSADDRKCTSGGCFYLGTNLISWFS 1454

Query: 1506 KRQSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPIL 1565
            K+Q+ + LSTA+AEYI+A    +Q++WMK  L++Y + +  + +YCDN +AI++SKNP+ 
Sbjct: 1455 KKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQ 1514

Query: 1566 HSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY-KAL 1606
            H+R KHI++++H+IRD V   ++ L+ VDT+ + ADI+ KAL
Sbjct: 1515 HNRTKHIDIRHHYIRDLVDDKIITLEHVDTEEQVADIFTKAL 1556



 Score =  145 bits (366), Expect = 1e-32
 Identities = 127/469 (27%), Positives = 202/469 (42%), Gaps = 71/469 (15%)

Query: 12  KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERP--VDAEGKKI----PRSEMTA 65
           +PP+ DG  +EYWK R+ +F    D+  W  ++ G+E P  +D EGK      P  + T 
Sbjct: 12  RPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTK 71

Query: 66  EQKKLYAQHHKARAILLSAISYEEYQKITDLEFA-NGIFESLKMSHEGNKKVKESKTLSL 124
           E+ +L   + KA   L + +    ++ I     A +   E LK +HEG  KVK S+   L
Sbjct: 72  EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDACGEILKTTHEGTSKVKMSRLQLL 131

Query: 125 IQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSI 184
             K+E+  M+  E I +       +      L +  T +  V +++RSLP+ +   VT+I
Sbjct: 132 ATKFENLKMKEEECIHDFHMNILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAI 191

Query: 185 ELTRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEES 244
           E  +D+  M ++ELI  L+  EL  S+  + + K++A  S                 +E 
Sbjct: 192 EEAQDICNMRVDELIGSLQTFELGLSDRNEKKSKNLAFVSN----------------DEG 235

Query: 245 EEASEDSDEDE-----LTLISKRLNHIWKHKQSKYR--------GSGKAKGKSESSGQKK 291
           EE   D D DE     + L+ K+ N +      + +           K     + S +K 
Sbjct: 236 EEDEYDLDTDEGLTNAVGLLGKQFNKVLNRMDRRQKPHVRNIPFDIRKGSEYHKKSDEKP 295

Query: 292 SSIKEVTCFECKESGHYKSDCPKLKKDKRPKKHFKTKKSLMV-TFDESESE-DVDSDGEV 349
           S  K + C  C+  GH K++CP   K        K +K L V   D++ESE + DSD +V
Sbjct: 296 SHSKGIQCHGCEGYGHIKAECPTHLK--------KQRKGLSVCRSDDTESEQESDSDRDV 347

Query: 350 QGLMTIVKDKEAESKEVPDSDSASEEDPNSDDENEVFASFSTSELKHALSDIMDKYNSLL 409
             L                     E D +S D    F   + S  K  +     K   +L
Sbjct: 348 NAL-----------------TGRFESDEDSSDIEITFDELAISYRKLCI-----KSEKIL 385

Query: 410 TKHKKLKKDFSAASKTPSEHEKIISELKNDNHALVNSNSVLKNQIANLE 458
            +  +LKK  +        HE+ ISELK +   L   NS L+N   +++
Sbjct: 386 QQEAQLKKVIANLEAEKEAHEEEISELKGEVGFL---NSKLENMTKSIK 431


>UniRef100_Q850V9 Putative polyprotein [Oryza sativa]
          Length = 1128

 Score =  855 bits (2209), Expect = 0.0
 Identities = 449/938 (47%), Positives = 609/938 (64%), Gaps = 32/938 (3%)

Query: 694  QGCKSDRWLCSI*QQEEEQHL*IRLSELEAQNVKCLLSVNEEQWV*HRRLGHASMRKISQ 753
            Q    DR + +  + E ++   +   +   +NV  L++     W+ HRRL H  M ++S+
Sbjct: 170  QRMTGDRAMFTTFEVEGKEQEKVTFGDNSKRNVIGLVAKTSFGWLWHRRLAHVGMNQLSK 229

Query: 754  LSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTE 813
            LSK +LV GL  +KF  D LC ACQ  K        K+++STSRPLELLH+DLFGP   +
Sbjct: 230  LSKRDLVVGLKDVKFEKDKLCSACQASKQVACSHPTKSIMSTSRPLELLHMDLFGPTTYK 289

Query: 814  SIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVFSTFIAQVQNEKACRIVRVRSDHGGEF 873
            SIGG  + +VIVDDYS +TWV FL  K     +F  F  + QNE +C +V++RSD+G +F
Sbjct: 290  SIGGNSHCLVIVDDYSCYTWVFFLHDKCIVAELFKKFAKRAQNEFSCTLVKIRSDNGSKF 349

Query: 874  ENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQEIGMAKHFWAEVVN 933
            +N   E   D   I H+ S   +PQQNGVVERKNRTL EMARTML E G++  FWAE +N
Sbjct: 350  KNTNIEDYCDDLSIKHELSATYSPQQNGVVERKNRTLIEMARTMLDEYGVSDSFWAEAIN 409

Query: 934  TACYIQNRISVRRILNKTPYELWKNIKPNISYFHSFGCVCYVLNTKDRLHKFDAKSSKCL 993
            TAC+  NR+ + R+L KT YEL    KPN++YF  FGC CY+     RL KF+++  +  
Sbjct: 410  TACHATNRLYLHRLLKKTSYELIVGRKPNVAYFRVFGCKCYIYRKGVRLTKFESRCDEGF 469

Query: 994  LLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSK----------LVEKFADLSIS 1043
            LLGY+  SK +R YN +   +EE+  V+FD+   S +            L+    ++SI 
Sbjct: 470  LLGYASNSKAYRVYNKNKGIVEETADVQFDETNGSQEGHENLDDVGDEGLMRAMKNMSIG 529

Query: 1044 ------VSDKGKALEEAEPE----------EDDPEEAGPSDSQPRKKSRIIASHPKELIL 1087
                  V DK     + EP           E + E+A      PR  + +   HP + +L
Sbjct: 530  DVKPIEVEDKPSTSTQDEPSTSASPSQAQVEVEKEKAQDPPMPPRIYTALSKDHPIDQVL 589

Query: 1088 GNKDEPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKNDV 1147
            G+  + V+TRS       ++      VS +EPK +DEAL D DW+ A+ EE+N F++N V
Sbjct: 590  GDISKGVQTRSPVA----SICEHYSFVSCLEPKHVDEALYDPDWMNAIHEELNNFARNKV 645

Query: 1148 WSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLE 1207
            W+LV++P+  +VIGTKWVFRNK +E   VVRNKARLVA+G++Q E +D+ ETF PVARLE
Sbjct: 646  WTLVERPRDHNVIGTKWVFRNKQDENRLVVRNKARLVAQGFTQVEDLDFGETFGPVARLE 705

Query: 1208 AIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYG 1267
            AIR+L++F+   +I L QMDVKSAFLNG I+E V+V QPPGF+D K P+HV+KL K+LYG
Sbjct: 706  AIRILLAFASCFDIKLFQMDVKSAFLNGEIAELVFVEQPPGFDDPKYPNHVYKLSKALYG 765

Query: 1268 LKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCK 1327
            LKQAPRAWYERL  FLL  +F  GKVDTTLF K   DD  + QIYVD IIFGS N+  CK
Sbjct: 766  LKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDDIIFGSTNEVFCK 825

Query: 1328 EFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKTPM 1387
            EF  MM  EFEMSM+ EL +FLG+Q+ Q  +GT++ Q+KY K+LLK+F + ++   KTPM
Sbjct: 826  EFGDMMSREFEMSMIEELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKPIKTPM 885

Query: 1388 HPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTAVK 1447
                 L+ ++    V  KLYR MIGSLLYLTASRPD +FSV + ARFQ+ P+E HL AVK
Sbjct: 886  ATNWHLDLDEGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMYARFQAAPKECHLVAVK 945

Query: 1448 RILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKR 1507
            RILRYLK ++ + L Y K +++KL GY D DYAG +  RKST G+CQ LG +LVSW+SK+
Sbjct: 946  RILRYLKHSSTISLWYPKGAKFKLVGYSDSDYAGYKVDRKSTSGSCQMLGRSLVSWSSKK 1005

Query: 1508 QSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQI--LESNIPIYCDNTAAISLSKNPIL 1565
            Q+++ LSTA+AEYISA  C  Q+LWMK  L DY I   E+  P+ C+N + I ++ NP+ 
Sbjct: 1006 QNSVALSTAEAEYISAGSCCAQLLWMKQILLDYGISFTETQTPLLCNNDSTIKIANNPVQ 1065

Query: 1566 HSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY 1603
            H R KHI++++HF+ D+V K  +++  + T+ + ADI+
Sbjct: 1066 HFRTKHIDIRHHFLTDHVAKCDIVISHIRTEDQLADIF 1103


>UniRef100_Q8VY36 Opie2a pol [Zea mays]
          Length = 1048

 Score =  843 bits (2178), Expect = 0.0
 Identities = 444/916 (48%), Positives = 586/916 (63%), Gaps = 45/916 (4%)

Query: 728  CLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPF 787
            CL++     W+ HRRL H  M+ + +L K   V GL  ++F  D  C ACQ GK  +   
Sbjct: 113  CLIAKTSMGWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFKKDRPCVACQAGKQVRGSH 172

Query: 788  KAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVF 847
              KNV++TSRPLE+LH+DLFGPV   SIGG +YG+VIVDD+SR+TWV FL  K E+    
Sbjct: 173  HTKNVMTTSRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQDKSETQGTL 232

Query: 848  STFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKN 907
              ++ + QNE   ++ ++RSD+G EF+N + E      GI H+FS P TPQQNGVVERKN
Sbjct: 233  KRYLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLVEEGIKHEFSAPYTPQQNGVVERKN 292

Query: 908  RTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFH 967
            RTL +MARTML E    + FW+E VNTAC+  NR+ + R+L  T YEL    KPN+SYF 
Sbjct: 293  RTLMDMARTMLGEFKTPERFWSEAVNTACHSINRVYLHRLLKNTSYELLTGNKPNVSYFR 352

Query: 968  SFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDD--- 1024
             FG  CY+L  K R  KF  K+ +  LLGY   +K +R +N  +  +E S  V FD+   
Sbjct: 353  VFGSKCYILVKKGRTSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSDVVFDETNG 412

Query: 1025 -------KLDSDQSKLVEKFADLSISVSD--KGKALEEAEPE---------EDD------ 1060
                    LD    + V   A  ++++ D    + LE+ +P          +DD      
Sbjct: 413  SLREQVVNLDDVDEEDVPTAAMRTMAIGDVRPQEHLEQDQPSSTTMVHPPTQDDEQAPQV 472

Query: 1061 -------------PEEAGPSDSQPRKKSRIIASHPKELILGNKDEPVRTRSAFRPSEETL 1107
                          EE  P     + ++ I  +HP   ILG+  + V TRS         
Sbjct: 473  GAHDQGGAQDVQVEEEEAPQAPPTQVRATIQRNHPVNQILGDISKGVTTRSRL----VNF 528

Query: 1108 LSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKNDVWSLVKKPQSVHVIGTKWVFR 1167
                  VS IEP  ++E L D DW+LAM+EE+N F +N+VW+LV +P+  +V+GTKWVFR
Sbjct: 529  CEHYSFVSSIEPFRVEEVLLDPDWVLAMQEELNNFKRNEVWTLVPRPKQ-NVVGTKWVFR 587

Query: 1168 NKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMD 1227
            NK +E G V RNKARLVAKGY+Q  G+D+ ETF PVARL++IR+ ++++ +H+  L+QMD
Sbjct: 588  NKQDEHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLKSIRIWLAYAAHHSFRLYQMD 647

Query: 1228 VKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENE 1287
            VKSAFLNG I EEVYV QPPGFEDE+ PDHV KL K+LYGLKQAPRAWYE L  FL+ N 
Sbjct: 648  VKSAFLNGPIKEEVYVEQPPGFEDERFPDHVCKLSKALYGLKQAPRAWYECLRDFLIANA 707

Query: 1288 FVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMGELKY 1347
            F  GK D TLF KT   D+ + QIYVD IIFGS NQ+ C+EFS++M  +FEMSMMGEL Y
Sbjct: 708  FKVGKADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQNSCEEFSRVMTQKFEMSMMGELSY 767

Query: 1348 FLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKTPMHPTCILEKEDASGKVCQKLY 1407
            FLG QV Q  +GT+I Q+KYT++L+K+F M ++  AKTPM      +       V QK Y
Sbjct: 768  FLGFQVRQLKDGTFISQTKYTQDLIKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAY 827

Query: 1408 RCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTS 1467
            R  IGSLLYL ASRPD + SV +CARFQSDPRE HL AVKRILRYL  T   G+ Y K S
Sbjct: 828  RSTIGSLLYLCASRPDIMLSVCMCARFQSDPRECHLVAVKRILRYLVATPCFGIWYPKGS 887

Query: 1468 EYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICS 1527
             + L GY D DYA  +  RKST   CQFLG +LVSW SK+Q+++ LSTA+AEY++   C 
Sbjct: 888  TFDLIGYSDSDYARCKVDRKSTSRMCQFLGRSLVSWNSKKQTSVALSTAEAEYVAVGQCC 947

Query: 1528 TQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGV 1587
             Q+LWM+  L D+    S +P+ CDN +AI +++NP+ HSR KHI++++HF+RD+ QKGV
Sbjct: 948  AQLLWMRQTLRDFGYNLSEVPLLCDNESAIRIAENPVEHSRTKHIDIRHHFLRDHQQKGV 1007

Query: 1588 LLLKFVDTDHKWADIY 1603
            + +  V +++  ADI+
Sbjct: 1008 IEVFHVSSENHLADIF 1023


>UniRef100_Q9C5V1 Gag/pol polyprotein [Arabidopsis thaliana]
          Length = 1643

 Score =  842 bits (2176), Expect = 0.0
 Identities = 427/897 (47%), Positives = 591/897 (65%), Gaps = 23/897 (2%)

Query: 728  CLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPF 787
            CL +  E+  + H+RLGH + R +S+L    +VRG+P LK     +C AC +GK  +V  
Sbjct: 728  CLRAEKEDPVLWHQRLGHMNARSMSKLVNKEMVRGVPELKHIEKIVCGACNQGKQIRVQH 787

Query: 788  KAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVF 847
            K    + T++ L+L+H+DL GP++TESI GKRY  V+VDD+SR+ WV+F+  K E+ + F
Sbjct: 788  KRVEGIQTTQVLDLIHMDLMGPMQTESIAGKRYVFVLVDDFSRYAWVRFIREKSETANSF 847

Query: 848  STFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKN 907
                 Q++NEK   I ++RSD GGEF N+ F S  +S GI H +S PRTPQ NGVVERKN
Sbjct: 848  KILALQLKNEKKMGIKQIRSDRGGEFMNEAFNSFCESQGIFHQYSAPRTPQSNGVVERKN 907

Query: 908  RTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFH 967
            RTLQEMAR M+   G+ + FWAE ++TACY+ NR+ VR   +KTPYE+WK  KPN+SYF 
Sbjct: 908  RTLQEMARAMIHGNGVPEKFWAEAISTACYVINRVYVRLGSDKTPYEIWKGKKPNLSYFR 967

Query: 968  SFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLD 1027
             FGCVCY++N KD+L KFD++S +   LGY+  S  +R +N     IEES++V FDD   
Sbjct: 968  VFGCVCYIMNDKDQLGKFDSRSEEGFFLGYATNSLAYRVWNKQRGKIEESMNVVFDDGSM 1027

Query: 1028 SDQSKLVEKFADLSISVSDK-GKALEEAEPEEDDPEEAGPSDSQPRKKSRIIASHPKELI 1086
             +   +V    +   S+S+  G+   + + +  D  ++G    +    +++   H  + I
Sbjct: 1028 PELQIIVRNRNEPQTSISNNHGEERNDNQFDNGDINKSGEESDEEVPPAQVHRDHASKDI 1087

Query: 1087 LGNKD-------------------EPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQ 1127
            +G+                     +  R  ++F   EE + S    VS++EPK++ EAL+
Sbjct: 1088 IGDPSGERVTRGVKQDYRQLAGIKQKHRVMASFACFEEIMFSC--FVSIVEPKNVKEALE 1145

Query: 1128 DKDWILAMEEEVNEFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKG 1187
            D  WILAMEEE+ EFS++ VW LV +P  V+VIGTKW+F+NK +E G++ RNKARLVA+G
Sbjct: 1146 DHFWILAMEEELEEFSRHQVWDLVPRPPQVNVIGTKWIFKNKFDEVGNITRNKARLVAQG 1205

Query: 1188 YSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPP 1247
            Y+Q EG+D+ ETF PVARLE IR L+  +      LHQMDVK AFLNG I EEVYV QP 
Sbjct: 1206 YTQVEGLDFDETFAPVARLECIRFLLGTACGMGFKLHQMDVKCAFLNGIIEEEVYVEQPK 1265

Query: 1248 GFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDIL 1307
            GFE+ + P++V+KLKK+LYGLKQAPRAWYERL++FL+   + RG VD TLF K     I+
Sbjct: 1266 GFENLEFPEYVYKLKKALYGLKQAPRAWYERLTTFLIVQGYTRGSVDKTLFVKNDVHGII 1325

Query: 1308 IVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKY 1367
            I+QIYVD I+FG  +  L K F K M  EF MSM+GELKYFLG+Q++QT EG  I QS Y
Sbjct: 1326 IIQIYVDDIVFGGTSDKLVKTFVKTMTTEFRMSMVGELKYFLGLQINQTDEGITISQSTY 1385

Query: 1368 TKELLKKFNMTESTIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFS 1427
             + L+K+F M  S  A TPM  T  L K++   KV +KLYR MIGSLLYLTA+RPD   S
Sbjct: 1386 AQNLVKRFGMCSSKPAPTPMSTTTKLFKDEKGVKVDEKLYRGMIGSLLYLTATRPDLCLS 1445

Query: 1428 VHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RK 1487
            V LCAR+QS+P+ +HL AVKRI++Y+ GT N GL Y + +   L GYCD D+ G+   R+
Sbjct: 1446 VGLCARYQSNPKASHLLAVKRIIKYVSGTINYGLNYTRDTSLVLVGYCDADWGGNLDDRR 1505

Query: 1488 STFGNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLWMKHQLEDY-QILESN 1546
            ST G   FLGSNL+SW SK+Q+ + LS+ ++EYI+   C TQ+LWM+    DY       
Sbjct: 1506 STTGGVFFLGSNLISWHSKKQNCVSLSSTQSEYIALGSCCTQLLWMRQMGLDYGMTFPDP 1565

Query: 1547 IPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY 1603
            + + CDN +AI++SKNP+ HS  KHI +++HF+R+ V++  + ++ V T+ +  DI+
Sbjct: 1566 LLVKCDNESAIAISKNPVQHSVTKHIAIRHHFVRELVEEKQITVEHVPTEIQLVDIF 1622



 Score =  124 bits (312), Expect = 2e-26
 Identities = 93/396 (23%), Positives = 190/396 (47%), Gaps = 40/396 (10%)

Query: 12  KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPV--DAEGKKIPRSE---MTAE 66
           K  M +   + +WK ++ +   G   + W     G++ PV     G+ + ++E     AE
Sbjct: 12  KAIMLEKGNYGHWKVKMRALIRGLGKEAWIATSVGWKAPVVKGENGEDVLKTEDQWTDAE 71

Query: 67  QKKLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQ 126
           + K  A + +A +++ ++++  ++++I + E A   ++ L  ++EG   VK S+   L  
Sbjct: 72  EAKATA-NSRALSLIFNSVNQNQFKRIQNCESAKEAWDKLAKAYEGTSSVKRSRIDMLAS 130

Query: 127 KYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIEL 186
           ++E+  M+ +E+IEE   +   + +    L K Y  K  V +++R LP  +    T++  
Sbjct: 131 QFENLTMDESENIEEFSGKISAIASEAHNLGKKYKDKKLVKKLLRCLPSRFESKRTAMGT 190

Query: 187 TRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESEE 246
           + D + +  EE++ +L+ +EL+ +  +    K +AL             A+ +E  E +E
Sbjct: 191 SLDTDTIDFEEVVGMLQAYELEITSGKGGYSKGVAL-------------AVSSEKNEIQE 237

Query: 247 ASEDSDEDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESG 306
             +DS        S+ +  + K   ++ +GS + + +      K+S   E+ C EC+  G
Sbjct: 238 L-KDSMSMMAKNFSRAMKRVEKRGFARNQGSDRDRDRDRDRNSKRS---EIQCHECQGYG 293

Query: 307 HYKSDCPKLKK------DKRPKKHFK--------TKKSLMVTFDESESEDVDSDGEVQGL 352
           H K++CP LK+      + R   H K              +   +S+S+D DS+ +V+G 
Sbjct: 294 HIKAECPSLKRKDLKCSECRGIGHTKFDCIGSKSKPDRSYIAESDSDSDDEDSEEDVKGF 353

Query: 353 MTIVKDKEAESKEVPDSDS---ASEEDPNSDDENEV 385
           ++ V   E ++     SDS     +E+ ++DDE++V
Sbjct: 354 VSFVGIIEDDNVSSDSSDSEVGCEKEEISADDESDV 389


>UniRef100_Q8H851 Putative Zea mays retrotransposon Opie-2 [Oryza sativa]
          Length = 2011

 Score =  837 bits (2161), Expect = 0.0
 Identities = 439/908 (48%), Positives = 584/908 (63%), Gaps = 44/908 (4%)

Query: 722  EAQNVKCLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGK 781
            EA    CL++     W+ HRRL H  M ++S+LSK +LV GL  +KF  D LC ACQ GK
Sbjct: 674  EANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLCSACQAGK 733

Query: 782  FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKD 841
                    K+++STSRPLELLH++ FGP   +SIGG  + +VIVDDYSR+TW+ FL  K 
Sbjct: 734  QVACSHPTKSIMSTSRPLELLHMEFFGPTTYKSIGGNSHCLVIVDDYSRYTWMFFLHDKS 793

Query: 842  ESHSVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNG 901
                +F  F  + QNE  C +V++RSD+G +F+N   E   D  GI H+ S   +PQQNG
Sbjct: 794  IVAELFKKFAKRGQNEFNCTLVKIRSDNGSKFKNTNIEDYCDDLGIKHELSATYSPQQNG 853

Query: 902  VVERKNRTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKP 961
            VVE KNRTL EMARTML E G++  FWAE +NTAC+  NR+ + R+L KT YEL    KP
Sbjct: 854  VVEMKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRLLKKTSYELIVGRKP 913

Query: 962  NISYFHSFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVR 1021
            N++YF  FGC CY+     RL KF+++  +  LLGY+  SK +R YN +   +EE+  V+
Sbjct: 914  NVAYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGIVEETADVQ 973

Query: 1022 FDDKLDSDQSK----------LVEKFADLSIS------VSDKGKALEEAEPE-------- 1057
            FD+   S +            L+    ++SI       V DK     + EP         
Sbjct: 974  FDETNGSQEGHENLDDVGDEGLMRAMKNMSIGDVKPIEVEDKPSTSTQDEPSTSATPSQA 1033

Query: 1058 --EDDPEEAGPSDSQPRKKSRIIASHPKELILGNKDEPVRTRSAFRPSEETLLSMKGLVS 1115
              E + E+A      PR  + +   HP + +LG+  + V+TRS       ++      VS
Sbjct: 1034 QVEVEEEKAQDLPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRVA----SICEHYSFVS 1089

Query: 1116 LIEPKSIDEALQDKDWILAMEEEVNEFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGD 1175
             +EPK +DEAL D DWI AM +E+N F++N VW+LV++ +  +VIGTKWVFRNK +E G 
Sbjct: 1090 CLEPKHVDEALCDPDWINAMHKELNNFARNKVWTLVERLRDHNVIGTKWVFRNKQDENGL 1149

Query: 1176 VVRNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNG 1235
            VVRNKAR VA+G++Q EG+D+ ETF PV RLEAI +L++F+   NI L QMDVKSAFLNG
Sbjct: 1150 VVRNKARFVAQGFTQVEGLDFGETFAPVTRLEAICILLAFASCFNIKLFQMDVKSAFLNG 1209

Query: 1236 YISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDT 1295
             I+E V+V QPPGFED K P+HV+KL K+LYGLKQAPRAWYERL  FLL  +F  GKVDT
Sbjct: 1210 EIAELVFVEQPPGFEDPKYPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDT 1269

Query: 1296 TLFCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQ 1355
            TLF K   DD  + QIYVD IIFG  N+  CKEF  MM  EFEMSM+GEL +F G+Q+ Q
Sbjct: 1270 TLFTKIIGDDFFVCQIYVDDIIFGCTNEVFCKEFGDMMSREFEMSMIGELSFFHGLQIKQ 1329

Query: 1356 TPEGTYIHQSKYTKELLKKFNMTESTIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLL 1415
              +GT              F + ++   KTPM     L+ ++    V  KLYR MIGSLL
Sbjct: 1330 LKDGT--------------FGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLL 1375

Query: 1416 YLTASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYC 1475
            YLTASRPD +FSV +CARFQ+ P+E HL AVKRILRYLK ++ +GL Y K +++KL GY 
Sbjct: 1376 YLTASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYS 1435

Query: 1476 DVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLWMKH 1535
            D DYAG +  RKST G+CQ LG +LVSW+SK+Q+ + L  A+AEY+SA  C  Q+LWMK 
Sbjct: 1436 DSDYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNFVALFIAEAEYVSAGSCCAQLLWMKQ 1495

Query: 1536 QLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDT 1595
             L DY I  +  P+ C+N +AI ++ NP+ HSR KHI++++HF+RD+V K  +++  + T
Sbjct: 1496 ILLDYGISFTKTPLLCENDSAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRT 1555

Query: 1596 DHKWADIY 1603
            + + ADI+
Sbjct: 1556 EDQLADIF 1563



 Score =  141 bits (355), Expect = 2e-31
 Identities = 120/451 (26%), Positives = 214/451 (46%), Gaps = 56/451 (12%)

Query: 12  KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTAEQKKLY 71
           K PMF+G  +  WK ++ +        +W I+  G+           P +E+     KL 
Sbjct: 10  KAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFAIT------GTPLTEIDHRNLKLN 63

Query: 72  AQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKYESF 131
           AQ   A  +L +++S EE+ ++++LE A  I+  L   HE   + K++K   L  +YE+F
Sbjct: 64  AQ---AMNVLFNSLSQEEFDRVSNLETAYEIWNKLAEIHESTSEYKDAKLHFLKIQYETF 120

Query: 132 IMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIELTRDVE 191
            M P+ES+ +M+ R  ++V  ++ L  +YT  +   +++R+LPE +  LVT + +  D+ 
Sbjct: 121 SMLPHESVNDMYGRLNVIVNDLKGLGANYTNLEVAQKMLRALPEKYETLVTML-INSDMS 179

Query: 192 RMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEES-----EE 246
           RM+   L+      ++  ++M  L+KK +      E + S+K  ALQAE E+       E
Sbjct: 180 RMTPASLLG-----KINTNDMYKLKKKEME-----EASPSKKCIALQAEVEDKSKSKVNE 229

Query: 247 ASEDSDEDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESG 306
            ++D  E+E+ L+++R N +   ++ + RGS   + ++    +  S+++   CFEC +S 
Sbjct: 230 VNKDL-EEEIVLLARRFNDLLGRRKERGRGSNSNRRRNRRPNKTLSNLR---CFEC-DSN 284

Query: 307 HYKSDCPKLKKDKRPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMTIVKDKEAESKEV 366
              S     +++       K KK  +V   E+ S              +    ++ SK  
Sbjct: 285 EESSASSGSEEEGGDDASSKKKKMAVVAIKEAPSL----------FAPLCLMAKSPSKVT 334

Query: 367 PDSDSASEEDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLTKHKKLKKDFSAASKTP 426
             SDS S++D +    +E+ + F   E  HA S+        + K K LKKD ++     
Sbjct: 335 SLSDSESDDDCDDVSYDELVSMF---EELHAYSE------KEIIKFKTLKKDHASL---- 381

Query: 427 SEHEKIISELKNDNHALVNSNSVLKNQIANL 457
              E +  ELK  +  L  S+  LK    NL
Sbjct: 382 ---EVLYEELKTSHERLTISHEKLKEAHDNL 409


>UniRef100_Q852C7 Putative gag-pol polyprotein [Oryza sativa]
          Length = 1969

 Score =  834 bits (2155), Expect = 0.0
 Identities = 438/926 (47%), Positives = 592/926 (63%), Gaps = 40/926 (4%)

Query: 727  KCLL-SVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKV 785
            +CL+ S N + +  HRRLGH     +S++S ++L+RGLP LK   D +C  C+ GK T  
Sbjct: 873  RCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVQKDLVCAPCRHGKMTSS 932

Query: 786  PFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHS 845
              K   +V T  P +LLH+D  GP + +S+GGK Y +V+VDD+SR++WV FL  K+E+  
Sbjct: 933  SHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKEETFG 992

Query: 846  VFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 905
             F +    +  E    +  +RSD+G EF+N  FES  DS G+ H FS P  PQQNGVVER
Sbjct: 993  FFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNGVVER 1052

Query: 906  KNRTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISY 965
            KNRTL EMARTML E    + FW E ++ AC+I NR+ +R IL+KTPYEL    +P +S+
Sbjct: 1053 KNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRPKVSH 1112

Query: 966  FHSFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDK 1025
               FGC C+VL + + L KF+++S   + LGY+  S+ +R Y      I E+  V FD+ 
Sbjct: 1113 LRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVTFDEA 1171

Query: 1026 L---------------------DSDQSKLVEKFADLSISVSDKGKALEEAEPEEDDP--- 1061
                                  D D    +    D +  V + G       P  D P   
Sbjct: 1172 SPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSP-STTSPSGDAPTTS 1230

Query: 1062 ----EEAGPSDSQPRKKSRIIASHPKELILGNKDEPVRTRSAFRPSEETLLSMKGLVSLI 1117
                EE     S P     I   HP + ++G   E V    ++       L     V+  
Sbjct: 1231 SSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYE------LVNSAFVASF 1284

Query: 1118 EPKSIDEALQDKDWILAMEEEVNEFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGDVV 1177
            EPK++  AL D++W+ AM EE+  F +N VWSLV+ P   +VIGTKWVF+NKL E G +V
Sbjct: 1285 EPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIV 1344

Query: 1178 RNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYI 1237
            RNKARLVA+G++Q EG+D+ ETF PVARLEAIR+L++F+ +    L QMDVKSAFLNG I
Sbjct: 1345 RNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVI 1404

Query: 1238 SEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTL 1297
             EEVYV QPPGFE+ K P+HVFKL+K+LYGLKQAPRAWYERL +FLL+N F  G VD TL
Sbjct: 1405 EEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTL 1464

Query: 1298 FCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQTP 1357
            F      D L+VQIYVD IIFG ++ +L  +FS +M  EFEMSMMGEL +FLG+Q+ QT 
Sbjct: 1465 FTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTK 1524

Query: 1358 EGTYIHQSKYTKELLKKFNMTESTIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLLYL 1417
            EG ++HQ+KY+KELLKKF+M +     TPM  T  L  ++   +V Q+ YR MIGSLLYL
Sbjct: 1525 EGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYL 1584

Query: 1418 TASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDV 1477
            TASRPD  FSV LCARFQ+ PR +H  AVKRI RY+K T   G+ Y  +S   +  + D 
Sbjct: 1585 TASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRAFSDA 1644

Query: 1478 DYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLWMKHQL 1537
            D+AG +  RKST G C FLG++LVSW+S++QS++  STA+AEY++AA   +Q+LWM   L
Sbjct: 1645 DFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTL 1704

Query: 1538 EDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDH 1597
            +DY +  S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V+KG ++L+FV+++ 
Sbjct: 1705 KDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEK 1764

Query: 1598 KWADIY-KALSRG*I*FHYEKSEYGL 1622
            + ADI+ K L R    F + +SE G+
Sbjct: 1765 QLADIFTKPLDRS--RFEFLRSELGV 1788



 Score =  146 bits (368), Expect = 6e-33
 Identities = 122/462 (26%), Positives = 206/462 (44%), Gaps = 73/462 (15%)

Query: 6   KDGYNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTA 65
           ++ Y+AKP +FDG  F  WK R+E++      ++W+ +   Y  P DA+        +T 
Sbjct: 2   EEKYSAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDAD--------ITP 53

Query: 66  EQKKLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLI 125
                   +++AR  ++  IS  E+ ++   + A+ ++ +L   HEGN  ++  +     
Sbjct: 54  ANMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFH 113

Query: 126 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPES-WMPLVTSI 184
           ++Y+ F M P ESI+  F RF  +++ +R + K ++  D+   ++  L    W   VTSI
Sbjct: 114 KEYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSI 173

Query: 185 ELTRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKA-------L 237
             +  +  +++++L S LK HE+     + L K S+AL +    + S    A       L
Sbjct: 174 TESAPLSDLTMDKLYSKLKTHEMDVFHRKGL-KHSMALVADPSGSTSSNDSAFVYGGFSL 232

Query: 238 QAEAEESEEASEDSDEDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEV 297
            A    +EE  E   ED+L L +++ +  +K+ + + RG                + +  
Sbjct: 233 AALHSVTEEQLEKIPEDDLALFARKFSRAYKNVRDRKRG---------------KTNEPF 277

Query: 298 TCFECKESGHYKSDCPKLKK--DKRPKK----HFKTKKSLM--------VTFDESESEDV 343
            CFEC E  H + +CPKLKK  DK  KK      K KK LM           +E +  D+
Sbjct: 278 VCFECGEPNHKRVNCPKLKKKSDKTTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDI 337

Query: 344 DSDGEVQ--------GLMTIV---------------KDKEAESKEVPDSDSASEE----D 376
           DSD + Q        G+  +                KD  +E  EV   D  S +    D
Sbjct: 338 DSDDDDQEKGDKDFSGMCCLANNEDFINLCLMALEDKDDSSEHPEVCLDDIPSLDGSLCD 397

Query: 377 PNSDDENEVFASFSTSELKHALSDIMDKYNSLLTKHKKLKKD 418
            +  D + V    S   + H + +I DKY S   K +KLK +
Sbjct: 398 DSCSDNDSVDDELSKERMAHLMIEISDKYRSSKYKIEKLKSE 439


>UniRef100_Q8H7T1 Putative Zea mays retrotransposon Opie-2 [Oryza sativa]
          Length = 2145

 Score =  833 bits (2151), Expect = 0.0
 Identities = 437/926 (47%), Positives = 592/926 (63%), Gaps = 40/926 (4%)

Query: 727  KCLL-SVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKV 785
            +CL+ S N + +  HRRLGH     +S++S ++L+RGLP LK   D +C  C+ GK T  
Sbjct: 873  RCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGKMTSS 932

Query: 786  PFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHS 845
              K   +V T  P +LLH+D  GP + +S+GGK Y +V+VDD+SR++WV FL  K+E+  
Sbjct: 933  SHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKEETFG 992

Query: 846  VFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 905
             F +    +  E    +  +RSD+G EF+N  FES  DS G+ H FS P  PQQNGVVER
Sbjct: 993  FFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNGVVER 1052

Query: 906  KNRTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISY 965
            KNRTL EMARTML E    + FW E ++ AC+I NR+ +R IL+KTPYEL    +P +S+
Sbjct: 1053 KNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRPKVSH 1112

Query: 966  FHSFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDK 1025
               FGC C+VL + + L KF+++S   + LGY+  S+ +R Y      I E+  V FD+ 
Sbjct: 1113 LRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVTFDEA 1171

Query: 1026 L---------------------DSDQSKLVEKFADLSISVSDKGKALEEAEPEEDDP--- 1061
                                  D D    +    D +  V + G       P  D P   
Sbjct: 1172 SPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSP-STTSPSGDAPTTS 1230

Query: 1062 ----EEAGPSDSQPRKKSRIIASHPKELILGNKDEPVRTRSAFRPSEETLLSMKGLVSLI 1117
                EE     S P     I   HP + ++G   E V    ++       L     V+  
Sbjct: 1231 SSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYE------LVNSAFVASF 1284

Query: 1118 EPKSIDEALQDKDWILAMEEEVNEFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGDVV 1177
            EPK++  AL D++W+ AM EE+  F +N VWSLV+ P   +VIGTKWVF+NKL E G +V
Sbjct: 1285 EPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIV 1344

Query: 1178 RNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYI 1237
            RNKARLVA+G++Q EG+D+ ETF PVARLEAIR+L++F+ +    L QMDVKSAFLNG I
Sbjct: 1345 RNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVI 1404

Query: 1238 SEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTL 1297
             EEVYV QPPGFE+ K P+HVFKL+K+LYGLKQAPRAWYERL +FLL+N F  G VD TL
Sbjct: 1405 EEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTL 1464

Query: 1298 FCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQTP 1357
            F      D L+VQIYVD IIFG ++ +L  +FS +M  EFEMSMMGEL +FLG+Q+ QT 
Sbjct: 1465 FTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTK 1524

Query: 1358 EGTYIHQSKYTKELLKKFNMTESTIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLLYL 1417
            EG ++HQ+KY+KELLKKF+M +     TPM  T  L  ++   +V Q+ YR MIGSLLYL
Sbjct: 1525 EGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYL 1584

Query: 1418 TASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDV 1477
            TASRPD  FSV LCARFQ+ PR +H  AVKR+ RY+K T   G+ Y  +S   +  + D 
Sbjct: 1585 TASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDA 1644

Query: 1478 DYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLWMKHQL 1537
            D+AG +  RKST G C FLG++LVSW+S++QS++  STA+AEY++AA   +Q+LWM   L
Sbjct: 1645 DFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTL 1704

Query: 1538 EDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDH 1597
            +DY +  S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V+KG ++L+FV+++ 
Sbjct: 1705 KDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEK 1764

Query: 1598 KWADIY-KALSRG*I*FHYEKSEYGL 1622
            + ADI+ K L R    F + +SE G+
Sbjct: 1765 QLADIFTKPLDRS--RFEFLRSELGV 1788



 Score =  146 bits (368), Expect = 6e-33
 Identities = 122/462 (26%), Positives = 206/462 (44%), Gaps = 73/462 (15%)

Query: 6   KDGYNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTA 65
           ++ Y+AKP +FDG  F  WK R+E++      ++W+ +   Y  P DA+        +T 
Sbjct: 2   EEKYSAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDAD--------ITP 53

Query: 66  EQKKLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLI 125
                   +++AR  ++  IS  E+ ++   + A+ ++ +L   HEGN  ++  +     
Sbjct: 54  ANMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFH 113

Query: 126 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPES-WMPLVTSI 184
           ++Y+ F M P ESI+  F RF  +++ +R + K ++  D+   ++  L    W   VTSI
Sbjct: 114 KEYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSI 173

Query: 185 ELTRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKA-------L 237
             +  +  +++++L S LK HE+     + L K S+AL +    + S    A       L
Sbjct: 174 TESAPLSDLTMDKLYSKLKTHEMDVFHRKGL-KHSMALVADPSGSTSSNDSAFVYGGFSL 232

Query: 238 QAEAEESEEASEDSDEDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEV 297
            A    +EE  E   ED+L L +++ +  +K+ + + RG                + +  
Sbjct: 233 AALHSVTEEQLEKIPEDDLALFARKFSRAYKNVRDRKRG---------------KTNEPF 277

Query: 298 TCFECKESGHYKSDCPKLKK--DKRPKK----HFKTKKSLM--------VTFDESESEDV 343
            CFEC E  H + +CPKLKK  DK  KK      K KK LM           +E +  D+
Sbjct: 278 VCFECGEPNHKRVNCPKLKKKSDKTTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDI 337

Query: 344 DSDGEVQ--------GLMTIV---------------KDKEAESKEVPDSDSASEE----D 376
           DSD + Q        G+  +                KD  +E  EV   D  S +    D
Sbjct: 338 DSDDDDQEKGDKDFSGMCCLANNEDFINLCLMALEDKDDSSEHPEVCLDDIPSLDGSLCD 397

Query: 377 PNSDDENEVFASFSTSELKHALSDIMDKYNSLLTKHKKLKKD 418
            +  D + V    S   + H + +I DKY S   K +KLK +
Sbjct: 398 DSCSDNDSVDDELSKERMAHLMIEISDKYRSSKYKIEKLKSE 439


>UniRef100_Q7XPI7 OSJNBb0004A17.2 protein [Oryza sativa]
          Length = 1877

 Score =  833 bits (2151), Expect = 0.0
 Identities = 437/926 (47%), Positives = 592/926 (63%), Gaps = 40/926 (4%)

Query: 727  KCLL-SVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKV 785
            +CL+ S N + +  HRRLGH     +S++S ++L+RGLP LK   D +C  C+ GK T  
Sbjct: 955  RCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGKMTSS 1014

Query: 786  PFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHS 845
              K   +V T  P +LLH+D  GP + +S+GGK Y +V+VDD+SR++WV FL  K+E+  
Sbjct: 1015 SHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKEETFG 1074

Query: 846  VFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 905
             F +    +  E    +  +RSD+G EF+N  FES  DS G+ H FS P  PQQNGVVER
Sbjct: 1075 FFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNGVVER 1134

Query: 906  KNRTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISY 965
            KNRTL EMARTML E    + FW E ++ AC+I NR+ +R IL+KTPYEL    +P +S+
Sbjct: 1135 KNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRPKVSH 1194

Query: 966  FHSFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDK 1025
               FGC C+VL + + L KF+++S   + LGY+  S+ +R Y      I E+  V FD+ 
Sbjct: 1195 LRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVTFDEA 1253

Query: 1026 L---------------------DSDQSKLVEKFADLSISVSDKGKALEEAEPEEDDP--- 1061
                                  D D    +    D +  V + G       P  D P   
Sbjct: 1254 SPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSP-STTSPSGDAPTTS 1312

Query: 1062 ----EEAGPSDSQPRKKSRIIASHPKELILGNKDEPVRTRSAFRPSEETLLSMKGLVSLI 1117
                EE     S P     I   HP + ++G   E V    ++       L     V+  
Sbjct: 1313 SSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYE------LVNSAFVASF 1366

Query: 1118 EPKSIDEALQDKDWILAMEEEVNEFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGDVV 1177
            EPK++  AL D++W+ AM EE+  F +N VWSLV+ P   +VIGTKWVF+NKL E G +V
Sbjct: 1367 EPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIV 1426

Query: 1178 RNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYI 1237
            RNKARLVA+G++Q EG+D+ ETF PVARLEAIR+L++F+ +    L QMDVKSAFLNG I
Sbjct: 1427 RNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVI 1486

Query: 1238 SEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTL 1297
             EEVYV QPPGFE+ K P+HVFKL+K+LYGLKQAPRAWYERL +FLL+N F  G VD TL
Sbjct: 1487 EEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTL 1546

Query: 1298 FCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQTP 1357
            F      D L+VQIYVD IIFG ++ +L  +FS +M  EFEMSMMGEL +FLG+Q+ QT 
Sbjct: 1547 FTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTK 1606

Query: 1358 EGTYIHQSKYTKELLKKFNMTESTIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLLYL 1417
            EG ++HQ+KY+KELLKKF+M +     TPM  T  L  ++   +V Q+ YR MIGSLLYL
Sbjct: 1607 EGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYL 1666

Query: 1418 TASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDV 1477
            TASRPD  FSV LCARFQ+ PR +H  AVKR+ RY+K T   G+ Y  +S   +  + D 
Sbjct: 1667 TASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDA 1726

Query: 1478 DYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLWMKHQL 1537
            D+AG +  RKST G C FLG++LVSW+S++QS++  STA+AEY++AA   +Q+LWM   L
Sbjct: 1727 DFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTL 1786

Query: 1538 EDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDH 1597
            +DY +  S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V+KG ++L+FV+++ 
Sbjct: 1787 KDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEK 1846

Query: 1598 KWADIY-KALSRG*I*FHYEKSEYGL 1622
            + ADI+ K L R    F + +SE G+
Sbjct: 1847 QLADIFTKPLDRS--RFEFLRSELGV 1870



 Score =  146 bits (368), Expect = 6e-33
 Identities = 122/462 (26%), Positives = 206/462 (44%), Gaps = 73/462 (15%)

Query: 6   KDGYNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTA 65
           ++ Y+AKP +FDG  F  WK R+E++      ++W+ +   Y  P DA+        +T 
Sbjct: 2   EEKYSAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDAD--------ITP 53

Query: 66  EQKKLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLI 125
                   +++AR  ++  IS  E+ ++   + A+ ++ +L   HEGN  ++  +     
Sbjct: 54  ANMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFH 113

Query: 126 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPES-WMPLVTSI 184
           ++Y+ F M P ESI+  F RF  +++ +R + K ++  D+   ++  L    W   VTSI
Sbjct: 114 KEYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSI 173

Query: 185 ELTRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKA-------L 237
             +  +  +++++L S LK HE+     + L K S+AL +    + S    A       L
Sbjct: 174 TESAPLSDLTMDKLYSKLKTHEMDVFHRKGL-KHSMALVADPSGSTSSNDSAFVYGGFSL 232

Query: 238 QAEAEESEEASEDSDEDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEV 297
            A    +EE  E   ED+L L +++ +  +K+ + + RG                + +  
Sbjct: 233 AALHSVTEEQLEKIPEDDLALFARKFSRAYKNVRDRKRG---------------KTNEPF 277

Query: 298 TCFECKESGHYKSDCPKLKK--DKRPKK----HFKTKKSLM--------VTFDESESEDV 343
            CFEC E  H + +CPKLKK  DK  KK      K KK LM           +E +  D+
Sbjct: 278 VCFECGEPNHKRVNCPKLKKKSDKTTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDI 337

Query: 344 DSDGEVQ--------GLMTIV---------------KDKEAESKEVPDSDSASEE----D 376
           DSD + Q        G+  +                KD  +E  EV   D  S +    D
Sbjct: 338 DSDDDDQEKGDKDFSGMCCLANNEDFINLCLMALEDKDDSSEHPEVCLDDIPSLDGSLCD 397

Query: 377 PNSDDENEVFASFSTSELKHALSDIMDKYNSLLTKHKKLKKD 418
            +  D + V    S   + H + +I DKY S   K +KLK +
Sbjct: 398 DSCSDNDSVDDELSKERMAHLMIEISDKYRSSKYKIEKLKSE 439


>UniRef100_Q60DR2 Putative polyprotein [Oryza sativa]
          Length = 1577

 Score =  832 bits (2150), Expect = 0.0
 Identities = 435/908 (47%), Positives = 583/908 (63%), Gaps = 46/908 (5%)

Query: 722  EAQNVKCLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGK 781
            EA    CL++     W+ HRRL H  M ++S+ SK +LV GL  +KF  D LC ACQ GK
Sbjct: 665  EANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKFSKRDLVMGLKDVKFEKDKLCSACQAGK 724

Query: 782  FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKD 841
                    K+++STS+PLELLH+DLF P   +SIGG  + +VIVDDYSR+TWV FL  K 
Sbjct: 725  QVACSHPTKSIMSTSKPLELLHMDLFDPTTYKSIGGNSHCLVIVDDYSRYTWVFFLHDKS 784

Query: 842  ESHSVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNG 901
                +F  F  + QNE +C +V++RS+ G EF+N   E   D  GI H+     +PQQNG
Sbjct: 785  IVADLFKKFAKRAQNEFSCTLVKIRSNIGSEFKNTNIEDYCDDLGIKHELFATYSPQQNG 844

Query: 902  VVERKNRTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKP 961
            VVERKNRTL EMARTML E G++  FWAE +NTAC+  NR+ + R+L KT YE+    KP
Sbjct: 845  VVERKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRVLKKTSYEVIVGRKP 904

Query: 962  NISYFHSFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVR 1021
            NI+YF  FGC CY+     RL KF+++  +  LLGY+ +SK +R YN +   +EE+  V+
Sbjct: 905  NIAYFRVFGCKCYIHRKGVRLTKFESRCDEGFLLGYASKSKAYRVYNKNKGIVEETADVQ 964

Query: 1022 FDDKLDSDQSK----------LVEKFADLSIS------VSDKGKALEEAEPE-------- 1057
            FD+   S +            L+    ++SI       V DK     + EP         
Sbjct: 965  FDETNGSQEGHENLDDVGDEGLMRVMKNMSIGDVKPIEVEDKPSTSTQDEPSTSAMPSQA 1024

Query: 1058 --EDDPEEAGPSDSQPRKKSRIIASHPKELILGNKDEPVRTRSAFRPSEETLLSMKGLVS 1115
              E + E+A      PR  + +   HP + +LG+  + V+TRS       ++      VS
Sbjct: 1025 QVEVEEEKAQEPPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRVT----SICEHYSFVS 1080

Query: 1116 LIEPKSIDEALQDKDWILAMEEEVNEFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGD 1175
             +E K +DEAL D DW+ AM EE+  F++N VW+LV++P+  +VIGTKWVFRNK +E G 
Sbjct: 1081 CLERKHVDEALCDPDWMNAMHEELKNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENGL 1140

Query: 1176 VVRNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNG 1235
            VVRNKARLVA+G++Q EG+D+ ETF PVARLEAI +L++F+   +I L QMDVKSAFLN 
Sbjct: 1141 VVRNKARLVAQGFTQVEGLDFGETFAPVARLEAICILLAFASCFDIKLFQMDVKSAFLN- 1199

Query: 1236 YISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDT 1295
                           D K P+HV+KL K+LYGL+QAPRAWYERL  FLL  +F  GKVD 
Sbjct: 1200 ---------------DTKYPNHVYKLSKALYGLRQAPRAWYERLRDFLLSKDFKIGKVDI 1244

Query: 1296 TLFCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQ 1355
            TLF K   DD  + QIYVD IIFGS N+  CKEF  MM  EFEMSM+GEL +FLG+Q+ Q
Sbjct: 1245 TLFTKIIGDDFFVYQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQ 1304

Query: 1356 TPEGTYIHQSKYTKELLKKFNMTESTIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLL 1415
               GT++ Q+KY K+LLK+F + ++   KTPM     L+ ++    V  KLYR MIGSLL
Sbjct: 1305 LKNGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLL 1364

Query: 1416 YLTASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYC 1475
            YLT SRPD +FSV +CARFQ+ P+E HL AVKRILRYLK ++ +GL Y K +++KL GY 
Sbjct: 1365 YLTVSRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYS 1424

Query: 1476 DVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLWMKH 1535
            D DYAG +  RKST  +CQ LG +LVSW+SK+Q+++ LSTA+ EY+SA  C  Q+LWMK 
Sbjct: 1425 DPDYAGCKVDRKSTSSSCQMLGRSLVSWSSKKQNSVALSTAETEYVSAGSCCAQLLWMKQ 1484

Query: 1536 QLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDT 1595
             L DY I  +  P+ CDN  AI ++ NP+ HSR KHI++++HF+RD+V K  +++  + T
Sbjct: 1485 TLLDYGISFTKTPLLCDNDGAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRT 1544

Query: 1596 DHKWADIY 1603
            + + ADI+
Sbjct: 1545 EDQLADIF 1552



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 55/201 (27%), Positives = 106/201 (52%), Gaps = 10/201 (4%)

Query: 9   YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTAEQK 68
           +  K PMF+G  +  WK ++ +        +W I+  G+           P  E+     
Sbjct: 7   HEGKAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFAIT------GTPLMEIDHRNL 60

Query: 69  KLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKY 128
           +L AQ   A   L +++S EE+ ++++LE A  I+  L   HEG  + K++K   L  +Y
Sbjct: 61  QLNAQAMNA---LFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFLKIQY 117

Query: 129 ESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIELTR 188
           E+F M P+ES+ +M+ R  ++V  ++ L  +YT  +   +++R+LPE +  LVT + +  
Sbjct: 118 ETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLVTML-INS 176

Query: 189 DVERMSLEELISILKCHELKR 209
           D+ RM+   L+  +  +++++
Sbjct: 177 DMSRMTPASLLGKINTNDMRK 197


>UniRef100_Q7XP45 OSJNBa0063G07.6 protein [Oryza sativa]
          Length = 1539

 Score =  823 bits (2126), Expect = 0.0
 Identities = 433/908 (47%), Positives = 579/908 (63%), Gaps = 59/908 (6%)

Query: 722  EAQNVKCLLSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGK 781
            EA    CL++     W+ HRRL H  M ++S+LSK +LV GL  +KF  D LC ACQ GK
Sbjct: 640  EANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLCSACQAGK 699

Query: 782  FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKD 841
                    K+++STSRPLELLH+DLFGP   +SIGG  + +VIVDDYSR+TWV FL  K 
Sbjct: 700  QVACSHPTKSIMSTSRPLELLHMDLFGPTTYKSIGGNSHCLVIVDDYSRYTWVFFLHDKS 759

Query: 842  ESHSVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNG 901
                +F     + QNE +C +V++RSD+G EF+N   E   D  GI H+ S   +PQQNG
Sbjct: 760  IVAELFKKIAKRAQNEFSCTLVKIRSDNGSEFKNTNIEDYCDDLGIKHELSATYSPQQNG 819

Query: 902  VVERKNRTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKP 961
            VVERKNRTL EMARTML E G++  FWAE +NTAC+  NR  + R+L  T YEL    KP
Sbjct: 820  VVERKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRFYLHRLLKNTSYELIVGRKP 879

Query: 962  NISYFHSFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVR 1021
            N++YF  FGC CY+     RL KF+++  +  LLGY+  SK +R YN +  T+EE+  V+
Sbjct: 880  NVAYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGTVEETADVQ 939

Query: 1022 FDDKLDSDQSK----------LVEKFADLS------ISVSDKGKALEEAEPE-------- 1057
            FD+   S +            L+    ++S      I V DK     + EP         
Sbjct: 940  FDETNGSQEGHENLDDVGDEGLIRAMKNMSFGDVKPIEVEDKPSTSTQDEPSTFATPSQA 999

Query: 1058 --EDDPEEAGPSDSQPRKKSRIIASHPKELILGNKDEPVRTRSAFRPSEETLLSMKGLVS 1115
              E + E+A      PR  + +   HP + +LG+  + V+T S       ++      VS
Sbjct: 1000 QVEVEEEKAQDPPIPPRIHTTLSKDHPIDQVLGDISKGVQTLSRV----ASICEHYSFVS 1055

Query: 1116 LIEPKSIDEALQDKDWILAMEEEVNEFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGD 1175
             +EPK +DEAL D DW+ AM EE+N F++N VW+LV++P+  +VIGTKWVFRNK +E G 
Sbjct: 1056 CLEPKHVDEALCDPDWMNAMHEELNNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENGL 1115

Query: 1176 VVRNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNG 1235
            VVRNKARLVA+G++Q EG+D+ ETF PVARLEAI +L++F+   +I L QMDVKSAFLNG
Sbjct: 1116 VVRNKARLVAQGFTQVEGLDFGETFAPVARLEAICILLAFASWFDIKLFQMDVKSAFLNG 1175

Query: 1236 YISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDT 1295
             I+E V+V QPPGFED K P+H FK+                             GKVDT
Sbjct: 1176 EIAELVFVEQPPGFEDPKYPNHDFKI-----------------------------GKVDT 1206

Query: 1296 TLFCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQ 1355
            TLF K   DD  + QIYVD IIFGS N+  CKEF  MM  EFEMSM+GEL +FLG+Q+ Q
Sbjct: 1207 TLFTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQ 1266

Query: 1356 TPEGTYIHQSKYTKELLKKFNMTESTIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLL 1415
              +GT++ Q+KY K+LLK+F + ++   KTPM     L+ ++    V  KLYR MIGSLL
Sbjct: 1267 LKDGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLL 1326

Query: 1416 YLTASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYC 1475
            YLTASRPD +FSV +CA FQ+ P+E HL AVKRILRYLK ++ +GL Y K +++KL GY 
Sbjct: 1327 YLTASRPDIMFSVCMCAWFQAAPKECHLVAVKRILRYLKYSSTIGLWYPKGAKFKLVGYS 1386

Query: 1476 DVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLWMKH 1535
            D DYAG +  R ST G+CQ LG +LVSW+SK+Q+++ LSTA+AEY+SA  C  Q+LWMK 
Sbjct: 1387 DSDYAGCKVDRNSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQ 1446

Query: 1536 QLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDT 1595
             L DY I  +  P+ CDN +AI ++ NP+ HSR KHI++++HF+RD+V K  +++  + T
Sbjct: 1447 TLLDYGISFTKTPLLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRT 1506

Query: 1596 DHKWADIY 1603
            + + ADI+
Sbjct: 1507 EDQLADIF 1514



 Score =  159 bits (403), Expect = 5e-37
 Identities = 128/479 (26%), Positives = 222/479 (45%), Gaps = 66/479 (13%)

Query: 12  KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTAEQKKLY 71
           K PMF+G  +  WK ++ +        +W I+  G+           P +E+     +L 
Sbjct: 10  KAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGFAIT------GTPLTEIDHRNLQLN 63

Query: 72  AQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKYESF 131
           AQ   A   L +++S EE+ ++++LE A  I+  L   HEG  + K++K   L  +YE+F
Sbjct: 64  AQAMNA---LFNSLSQEEFDRVSNLETAYEIWNKLAKIHEGTSEYKDAKLHFLKIQYETF 120

Query: 132 IMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIELTRDVE 191
            M P+ES+ +M+ R  ++V  ++ L  +YT  +   +++R+LPE +  LVT + +  D+ 
Sbjct: 121 SMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAKKMLRALPEKYETLVTML-INSDMS 179

Query: 192 RMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESEEASEDS 251
           RM+   L+      ++  ++M  L+KK +      E + S+K  ALQAE E+  + ++ +
Sbjct: 180 RMTPASLLG-----KINTNDMYKLKKKEME-----EASPSKKCIALQAEVEDKGKVNDVN 229

Query: 252 D--EDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESGHYK 309
              E+E+ L+++R N     ++ + +GS   + +++   +  S+++   CFEC E GH+ 
Sbjct: 230 KNLEEEIALLARRFNDFLGRRKERGKGSNSNRRRNKRPNKTLSNLR---CFECGEKGHFA 286

Query: 310 SDCPKLKKD---------------KRPKKHFKTKKSLMVTFDESE---------SEDVDS 345
           S CP    D               K+ KK  K  ++ +  +D +E          ED D 
Sbjct: 287 SKCPSKDDDGDKSSKKKSGGYKLMKKLKKEGKKIEAFIGEWDSNEESSASSGSKEEDGDD 346

Query: 346 DGEVQGLMTIVKDKEAESKEVP-------DSDSASEEDPNSDDENEVFASFSTSELKHAL 398
               +  M +V  KEA S   P        S   S  D  SDD+ +     S  EL    
Sbjct: 347 ASSKKKKMAVVAIKEAPSLFAPLCLMAKGSSKVTSLSDSESDDDCD---DISYDELVSMF 403

Query: 399 SDIMDKYNSLLTKHKKLKKDFSAASKTPSEHEKIISELKNDNHALVNSNSVLKNQIANL 457
            ++       + K K LKKD ++        E +  ELK  +  L  S+  LK    NL
Sbjct: 404 EELHAYSEKEIVKFKALKKDHASL-------EVLYEELKTSHERLTISHEKLKEAHDNL 455


>UniRef100_Q7XET2 Hypothetical protein [Oryza sativa]
          Length = 1419

 Score =  817 bits (2111), Expect = 0.0
 Identities = 417/864 (48%), Positives = 566/864 (65%), Gaps = 31/864 (3%)

Query: 740  HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPFKAKNVVSTSRPL 799
            HRRLGH     +++LS L+LVRGL  LK   D +C  C+  K           V T  P 
Sbjct: 562  HRRLGHVGFDHLTRLSGLDLVRGLSKLKKDLDLICTPCRHAKMVSTSHAPIVSVMTDAPG 621

Query: 800  ELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVFSTFIAQVQNEKA 859
            +LLH+D  GP + +S+GGK Y +VIVDD+SR++WV F++ KDE+   F     +++ E  
Sbjct: 622  QLLHMDTVGPARVQSVGGKWYVLVIVDDFSRYSWVFFMTTKDEAFQHFRGLFLRLELEFP 681

Query: 860  CRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQ 919
              + R+RSD+GGEF+N  FE   +  G+ H+FS PR PQQN VVERKNR L EMARTML 
Sbjct: 682  GSLKRIRSDNGGEFKNASFEQFCNERGLEHEFSSPRVPQQNSVVERKNRVLVEMARTMLD 741

Query: 920  EIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFHSFGCVCYVLNTK 979
            E    + FWAE +NTACYI NR+ +R  L KT YEL    +P +S+   FGC C+VL + 
Sbjct: 742  EYKTTRKFWAEAINTACYISNRVFLRSKLGKTSYELRFGHQPKVSHLRVFGCKCFVLKSG 801

Query: 980  DRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFAD 1039
            + L KF+A+S+  L LGY   ++G+R        I E+  V FD+     +  +      
Sbjct: 802  N-LDKFEARSTDGLFLGYPAHTRGYRVLILGTNKIVETCEVSFDEASPGTRPDIA---GT 857

Query: 1040 LSISVSDKGKALEEAEPEEDDPEEAGPSDSQPRKKSRIIASHPKELILGNKDEPVRTRSA 1099
            LS    + G+  E+    +DD E     +   R K   + +H            V   SA
Sbjct: 858  LSQVQGEDGRIFEDESDYDDDDEVGSAGERTTRSK---VTTHD-----------VCANSA 903

Query: 1100 FRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKNDVWSLVKKPQSVHV 1159
            F             V+  EPK +  AL D+ WI AM EE+  F +N VW+LV+ P   +V
Sbjct: 904  F-------------VASFEPKDVSHALTDESWINAMHEELENFERNKVWTLVEPPSGHNV 950

Query: 1160 IGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNH 1219
            IGTKWVF+NK NE G +VRNKARLVA+G++Q EG+D+ ETF PVAR+EAIRLL++F+ + 
Sbjct: 951  IGTKWVFKNKQNEDGLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLLLAFAASK 1010

Query: 1220 NIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERL 1279
               L+QMDVKSAFLNG+I EEVYV QPPGFE+   P+HVFKL K+LYGLKQAPRAWY+RL
Sbjct: 1011 GFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDRL 1070

Query: 1280 SSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEM 1339
             +FLL   F  GKVD TLF   + D+ L VQIYVD IIFG +  ++  +F++ M+ EFEM
Sbjct: 1071 KNFLLAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDDIIFGCSTHAVVVDFAETMRREFEM 1130

Query: 1340 SMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKTPMHPTCILEKEDAS 1399
            SMMGEL YFLG+Q+ QTP+GT++HQ+KYTK+LL++F M       TP+  T +L+ ++  
Sbjct: 1131 SMMGELSYFLGLQIKQTPQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDG 1190

Query: 1400 GKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNL 1459
              V QK YR MIGSLLYLTASRPD  F+V LCARFQ+ PR +H  AVKRI+RYL  T   
Sbjct: 1191 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 1250

Query: 1460 GLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTAKAE 1519
            G+ Y  +S   LSGY D D+ G R  RKST G C FLG++L++W+S++QS++  STA++E
Sbjct: 1251 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 1310

Query: 1520 YISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFI 1579
            Y++AA C +Q+LW+   L+DY I    +P++CDNT+AI+++KNP+ HSR KHI++++HF+
Sbjct: 1311 YVAAASCCSQILWLLSTLKDYGITFEKVPLFCDNTSAINIAKNPVQHSRTKHIDIRFHFL 1370

Query: 1580 RDYVQKGVLLLKFVDTDHKWADIY 1603
            RD+V+KG + L+F+DT  + ADI+
Sbjct: 1371 RDHVEKGDVELQFLDTKLQIADIF 1394



 Score =  127 bits (318), Expect = 4e-27
 Identities = 103/423 (24%), Positives = 190/423 (44%), Gaps = 42/423 (9%)

Query: 9   YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTAEQK 68
           ++ KP +FDG  F +W  +++S+ +  + D+W  +   Y          IP +  T   K
Sbjct: 7   FSTKPHIFDGTDFPHWCSKMQSYIMAENYDIWRKVSHPYV---------IPEAINTDALK 57

Query: 69  KLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKY 128
             +  + KAR IL S IS  +Y ++  LE A+ I+ +LK  H+G K +KE +     ++Y
Sbjct: 58  TEFENNCKARNILSSGISRSDYDRVAHLETAHEIWNALKNFHQGTKNIKELRRDLFKKEY 117

Query: 129 ESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPES-----WMPLVTS 183
             F M+  E++++  SRF  +++ +R ++ SY        + R          W   VTS
Sbjct: 118 IKFEMKSGEALDDYLSRFNKILSDLRSVDSSYDANYPQSEISRHFLNGLDMSIWEMKVTS 177

Query: 184 IELTRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYE---KAKSEKSKALQAE 240
           I+ + ++  ++L+ L + LK  E+     +   K S  + S       A S     L A 
Sbjct: 178 IQESVNMSTLTLDSLYTKLKTREMNILSRKVDSKSSALVSSSSSLIVDASSSMPSFLAAF 237

Query: 241 AEESEEASEDSDEDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCF 300
              S++  E  +E++L L++ R+     + +++ RG                      CF
Sbjct: 238 NATSDDQLEQIEEEDLALVANRIARAMNNARNRKRGGPN------------------RCF 279

Query: 301 ECKESGHYKSDCPKLKKDKRPKKH-FKTKKSLMVTFDESESEDVDSDGEVQGLMTIVKDK 359
           EC    H +S CPKL + KR  K   KT  +    +++S+    +   +++ L    +  
Sbjct: 280 ECGSIDHLRSHCPKLGRGKREDKDGEKTNNNKPNNYNKSKGS--NQGRKMENLRKAFQQV 337

Query: 360 EAESKEVPDSDSASEEDPNSDDENEV-FASFSTSELKH---ALSDIMDKYNSLLTKHKKL 415
            A  + + D D  S +D    + ++V F +   S+ ++    +S   +  N L  K+KK+
Sbjct: 338 CAAFEPLSDVDGESGDDDKGKNVSDVCFMARGESDTEYEDNEVSAFEEAINILSAKNKKV 397

Query: 416 KKD 418
             D
Sbjct: 398 FSD 400


>UniRef100_Q7XBD2 Retrotransposon Opie-2 [Zea mays]
          Length = 1512

 Score =  754 bits (1947), Expect = 0.0
 Identities = 396/816 (48%), Positives = 525/816 (63%), Gaps = 63/816 (7%)

Query: 792  VVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVFSTFI 851
            +V    PLELLH+DLFGPV   SIGG +YG+VIVDD+SR+TWV FL  K E+      F+
Sbjct: 731  IVFLQIPLELLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQDKSETQGTLKRFL 790

Query: 852  AQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQ 911
             + QNE   ++ ++RSD+G EF+N + E   +  GI H+FS P TPQQNGVVERKNRTL 
Sbjct: 791  RRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNGVVERKNRTLI 850

Query: 912  EMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFHSFGC 971
            +MARTML E    + FW+E VNTAC+  NR+ + R+L KT YEL    KPN+SYF  FG 
Sbjct: 851  DMARTMLGEFKTPECFWSEAVNTACHAINRVYLHRLLKKTSYELLTGNKPNVSYFRVFGS 910

Query: 972  VCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQS 1031
             CY+L  K R  KF  K+ +  LLGY   +K +R +N  +  +E S  V FD+   S + 
Sbjct: 911  KCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSDVVFDETNGSPRE 970

Query: 1032 KLVE----KFADLSISVSDKGKALEEAEPEEDDPEEAGPSDSQPRKKSRIIASHPKELIL 1087
            ++V+       D+  + + +  A+ E  P+E D                           
Sbjct: 971  QVVDCDDVDEEDVP-TAAIRTMAIGEVRPQEQD--------------------------- 1002

Query: 1088 GNKDEPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKNDV 1147
              +D+P  + +   P+++            +P  ++EAL D DW+LAM+EE+N F +N+V
Sbjct: 1003 -ERDQPSSSTTVHPPTQDDE----------QPFRVEEALLDLDWVLAMQEELNNFKRNEV 1051

Query: 1148 WSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLE 1207
            WSL                    +E G V RNKARLVAKGY+Q  G+D+ ETF PVARLE
Sbjct: 1052 WSL--------------------DEHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLE 1091

Query: 1208 AIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYG 1267
            +IR+L++++ +H+  L+QMDVKSAFLNG I EEVYV QPPGFEDE+ PDHV KL K+LYG
Sbjct: 1092 SIRILLAYAAHHSFRLYQMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLAKALYG 1151

Query: 1268 LKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCK 1327
            LKQAPRAWYE L  FL+ N F  GK D TLF KT   D+ + QI+VD IIFGS NQ  C+
Sbjct: 1152 LKQAPRAWYECLRDFLIANAFKVGKADPTLFTKTCNGDLFVCQIFVDDIIFGSTNQKSCE 1211

Query: 1328 EFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKTPM 1387
            EFS++M  +FEMSMMG+L YFLG QV Q  +GT+I Q KYT++LLK+F M ++  AKTPM
Sbjct: 1212 EFSRVMTQKFEMSMMGKLNYFLGFQVKQLKDGTFISQMKYTQDLLKRFGMKDAKPAKTPM 1271

Query: 1388 HPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTAVK 1447
                  +       V QK YR MIGSLLYL ASRPD + SV +CARFQS+P+E HL AVK
Sbjct: 1272 GTDGHTDLNKGGKSVDQKAYRSMIGSLLYLCASRPDIMLSVCMCARFQSEPKECHLVAVK 1331

Query: 1448 RILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKR 1507
            RILRYL  T   GL Y K S + L GY D D AG +  RKST G CQFLG +LVSW SK+
Sbjct: 1332 RILRYLVATPCFGLWYPKGSTFDLVGYSDSDNAGCKVDRKSTSGTCQFLGRSLVSWNSKK 1391

Query: 1508 QSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHS 1567
            Q+++ LSTA+AEY++A  C  Q+LWM+  L D+    S +P+ CDN +AI +++NP+ H+
Sbjct: 1392 QTSVALSTAEAEYVAAGQCCAQLLWMRQTLRDFGYNLSKVPLLCDNESAIRMAENPVEHN 1451

Query: 1568 RAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY 1603
            R KHI++++HF+RD+ QKG + +  V T+++ ADI+
Sbjct: 1452 RTKHIDIRHHFLRDHQQKGDIEVFHVSTENQLADIF 1487



 Score =  115 bits (287), Expect = 1e-23
 Identities = 116/498 (23%), Positives = 216/498 (43%), Gaps = 69/498 (13%)

Query: 12  KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTAEQKKLY 71
           KPP FDG+ + +W  ++ +        +W+I+           G K   S+      +  
Sbjct: 100 KPPHFDGEDYGFWSHKMRTHLFSLHPSIWEIV---------ESGMKFDSSDSPVFINEQI 150

Query: 72  AQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKYESF 131
            ++ +A  +LL+++  +EY K++ L+ A  I+++LK+SHEGN     +K   +  +   F
Sbjct: 151 HKNAQATTVLLASLCRDEYHKVSGLDNAKQIWDTLKISHEGNDVTLLTKMELVEGELGRF 210

Query: 132 IMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIR-VIRSLPESWMPLVTSIELTRDV 190
            M   E   + ++R + L+  IR    +  T   V+R ++RS       LV +I      
Sbjct: 211 AMIRGEEPTQTYNRLKTLINKIRSYGSTRWTDHDVVRLMLRSFTVLDPHLVNNIRENPRY 270

Query: 191 ERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQA-EAEESEEASE 249
            +MS EE   +L      R  +++ R    AL     + +    KA ++ EA  S+ A  
Sbjct: 271 TKMSPEE---VLGKFVSGRMMIKEARYVDDALNGPINEPQPLALKATRSKEALPSKVAQF 327

Query: 250 DS---DEDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESG 306
           ++   +++E+ LI KR   + K ++ +     KAKGK              +CF+C + G
Sbjct: 328 EAAGLNDEEMALIIKRFKTVLKGRKGQ-PSKTKAKGKR-------------SCFKCGKLG 373

Query: 307 HYKSDCPKLKKD------KRPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMT------ 354
           H+ ++CP    D      +  KK++K  K       E +S+   SD + +GL        
Sbjct: 374 HFIANCPDNDSDQDQGNKREKKKNYKKAKGEAHLGKEWDSDCSSSDSDNEGLAATAFNKS 433

Query: 355 -----------IVKDKEAESKEVPDSDSASEEDPNSDDENEVFASF---------STSEL 394
                      + ++K+  +       S+SE++ + DDE +    F           +EL
Sbjct: 434 SLFPNERHTCLMAREKKVSTHNTSTYASSSEDESSDDDEIDYSCLFKGLDRTKVDKINEL 493

Query: 395 KHALSD---IMDKYNSLL-TKHKKLKKDFSAASKTPSEHEKIISELKNDNHALVNSNSVL 450
             AL+D   +++K   LL  +H K  +   + +     +E + SEL + +  +       
Sbjct: 494 IDALNDRNILLEKQEDLLYEEHDKFVEAQKSLALEIKRNEMLSSELSSCHETIAKLKGFN 553

Query: 451 KNQIANLEEIIACDASDC 468
            +  A LE  +AC ++ C
Sbjct: 554 DDLNAKLE--VACKSNSC 569


>UniRef100_Q75LG0 Putative integrase [Oryza sativa]
          Length = 1507

 Score =  749 bits (1935), Expect = 0.0
 Identities = 398/887 (44%), Positives = 556/887 (61%), Gaps = 52/887 (5%)

Query: 740  HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPFKAKNVVSTSRPL 799
            HRRLGH     +++LS L+LVRGLP LK   D  C  C   K           V T  P 
Sbjct: 625  HRRLGHVGFDHLTRLSGLDLVRGLPKLKKDLDLDCAPCHHAKMVASSHAPIVSVMTDAPR 684

Query: 800  ELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVFSTFIAQVQNEKA 859
            +LLH+D  GP + +S+GGK Y +VI+DD+SR++WV F++ KDE+   F     +++ E  
Sbjct: 685  QLLHMDTVGPARVQSVGGKWYVLVIIDDFSRYSWVFFMATKDEAFQHFRGLFLRLELEFP 744

Query: 860  CRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQ 919
              + R+RSD+G E++N  FE   +  G+ H+FS PR PQQNGVVERKN  L EM RTML 
Sbjct: 745  GSLKRIRSDNGSEYKNASFEQFCNERGLEHEFSSPRVPQQNGVVERKNHVLVEMVRTMLD 804

Query: 920  EIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFHSFGCVCYVLNTK 979
            E    + FWAE +NTA YI NR+ +R  L K+ YEL    +P +S+   FGC C+VL + 
Sbjct: 805  EYKTPRKFWAEAINTAYYISNRVFLRSKLGKSSYELRFGHQPKVSHLRVFGCKCFVLKSG 864

Query: 980  DRLHKFDAKSSKCLLLGYSDRSKGFRFYNT----DAKTIEESIHVRFDDKLDS------- 1028
            + L KF+A+S+  L LGY   ++G+R  +     D +  E+      DD++ S       
Sbjct: 865  N-LDKFEARSTDGLFLGYPAHTRGYRTLSQVQGEDGRIFEDESDDNDDDEVGSAGQTGRQ 923

Query: 1029 -DQSKLVEKFADLSISVSDKGKALEEAEPE--EDDPEEAGPS---DSQPRKKSRIIAS-- 1080
              Q+             SD+     E   +   D P E   S   D++    S ++A   
Sbjct: 924  AGQTAGTPPVRPAHEERSDRPGLSAEGSVDAVRDGPLEITTSTSTDTEHGSTSEVVAPLH 983

Query: 1081 ----HPKELILGNKDEPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAME 1136
                HP E I+GN  E   TRS  + +   + +    V+  EPK +  AL D+ WI AM 
Sbjct: 984  IQQRHPPEQIIGNIGERT-TRS--KVTTHDVCANYAFVASFEPKDVSHALTDESWINAMH 1040

Query: 1137 EEVNEFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDY 1196
            EE+  F +N VW+LV+ P   ++IGTKWVF+NK NE   +VRNKARLVA+G++Q EG+D+
Sbjct: 1041 EELENFERNKVWTLVEPPSGHNIIGTKWVFKNKQNEDDLIVRNKARLVAQGFTQVEGLDF 1100

Query: 1197 TETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPD 1256
             ETF PVAR+EAIRL ++F+ +    L+QMDVKSAFLNG+I EEVYV QPPGFE+   P+
Sbjct: 1101 DETFAPVARIEAIRLFLAFASSKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPN 1160

Query: 1257 HVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKI 1316
            +VFKL K+LYGLKQAPRAWY+RL +FLL   F  GKVD TLF                  
Sbjct: 1161 YVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLFV----------------- 1203

Query: 1317 IFGSANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFN 1376
                    L  +F++ M+ EFEMSMMGEL YFLG+Q+ QTP+GT++HQ+KYTK+LL++F 
Sbjct: 1204 --------LKHDFAETMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKYTKDLLRRFK 1255

Query: 1377 MTESTIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQS 1436
            M       TP+  T +L+ ++    V QK YR MIGSLLYLTASRP+  F+V LCARFQ+
Sbjct: 1256 MENCKPISTPIDSTAVLDPDEDGEAVDQKEYRSMIGSLLYLTASRPEIQFAVCLCARFQA 1315

Query: 1437 DPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFL 1496
             PR +H  AVKRI+RYL  T   G+ Y  +S   LSGY D ++ G R  RKST G C FL
Sbjct: 1316 SPRASHRQAVKRIMRYLNHTLEFGIWYSTSSSLCLSGYSDANFGGCRIDRKSTSGTCHFL 1375

Query: 1497 GSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAA 1556
            G++L++W+S++QS++  STA++EY++AA C +Q+LW+   L++Y +    +P++CDNT+A
Sbjct: 1376 GTSLIAWSSRKQSSVAQSTAESEYVAAASCCSQILWLLSTLKNYGLTFEKVPLFCDNTSA 1435

Query: 1557 ISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY 1603
            I+++KN + HSR KH+++++HF+RD+V+KG + L+F+DT  + ADI+
Sbjct: 1436 INIAKNLVQHSRTKHVDIRFHFLRDHVEKGDVELQFLDTKLQIADIF 1482



 Score =  102 bits (253), Expect = 1e-19
 Identities = 122/546 (22%), Positives = 223/546 (40%), Gaps = 99/546 (18%)

Query: 9   YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTAEQK 68
           ++ KP +FDG  F +W  R++S+ +  D D+W  +   Y          IP +  TA +K
Sbjct: 7   FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPYV---------IPEAINTAAEK 57

Query: 69  KLYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKY 128
             + Q+ KAR ILLS IS  +Y ++  L+ A+ I+ +L   H+G   +KE +     ++Y
Sbjct: 58  TAFEQNCKARNILLSGISRSDYDRVAHLQTAHEIWTTLSNFHQGTNNIKELRRDLFKKEY 117

Query: 129 ESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPES-----WMPLVTS 183
             F M+P E++++  SRF  +++ +R ++ SY        + R          W   VTS
Sbjct: 118 IKFEMKPGEALDDYLSRFNKILSDLRSVDSSYDANYPQSEISRHFLNGLDMSIWEMKVTS 177

Query: 184 IELTRDVERMSLEELISILK-------------------CHELKRSEMQDL---RKKSIA 221
           I+ +  +  ++L+ L + LK                   C +L R + +D    +  +  
Sbjct: 178 IQESVKMSTLTLDSLYTKLKRGGPNRCFECGSIDHLRSHCPKLGRGKREDKDGEKNNNNK 237

Query: 222 LKSKYEKAKSEK-SKALQAEAEESEEAS----EDSDEDELTLISKRLNHIWKHKQSKYRG 276
            K  Y+  K E   KA Q      E  S    E  D+D+     K ++ +          
Sbjct: 238 PKGSYQGRKMENLRKAFQQVCAAFEPLSDVDGESGDDDK----GKNVSDV---------- 283

Query: 277 SGKAKGKSESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKRPKKHFKTKKSLMVTFD 336
              A+G+S++  +      EV+ FE  E+ +  S      K+K+ +K ++ ++ ++    
Sbjct: 284 CFMARGESDTEYED----NEVSAFE--EAINILS-----AKNKKCEKMYRKQEFII---- 328

Query: 337 ESESEDVDSDGEVQGLMTIVKDKEAESKEVPDSDSASEEDPNSDDENEVFASFSTSELKH 396
           ES   ++DS   +     I  D + E+ EV  ++ +   D N+  + +   S + S   H
Sbjct: 329 ESLKSEIDSLKSL-----IPNDDDCENCEVLMNEISKIRDVNTAHDLKNRPSLTCSFALH 383

Query: 397 A--------LSDIMDKYNSLLTKHKKLKKDFSAASKTPSEHEKIISELKNDN-------- 440
                       ++ KY   +  H  L  +  +A      H+ +     N N        
Sbjct: 384 TRTLDELFLTKKMLQKYQ--IVFHASLMFNMISAKNLKKPHDVLDCSTCNLNKLKLKDAL 441

Query: 441 ------HALVNSNSVLKNQIANLEEIIACDASDCKNESKYEKSFQRFLAKSVDRSLMASM 494
                   +V +N VL        + +  D  +C N  K     +  L +  D     +M
Sbjct: 442 GRVEYMEDVVKNNEVLSCPKCRKSKCVMVDCENCANLEKEVSYLKNSLLRFSDGKKNLNM 501

Query: 495 IYGVSR 500
           I   S+
Sbjct: 502 ILDQSK 507


>UniRef100_Q8W0X4 Putative pol protein [Zea mays]
          Length = 1657

 Score =  749 bits (1935), Expect = 0.0
 Identities = 395/804 (49%), Positives = 516/804 (64%), Gaps = 45/804 (5%)

Query: 840  KDESHSVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQ 899
            K E+      F+ + QNE   ++ ++RSD+G EF+N + E   +  GI H+FS P TPQQ
Sbjct: 834  KSETQGTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQ 893

Query: 900  NGVVERKNRTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNI 959
            NGVVERKNRTL +MARTML E    + FW E VNTAC+  NR+ + R+L KT YEL  + 
Sbjct: 894  NGVVERKNRTLIDMARTMLGEFKTPECFWTEAVNTACHAINRVYLHRLLKKTSYELLTDN 953

Query: 960  KPNISYFHSFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIH 1019
            KPN+SYF  FG  CY+L  K R  KF  K+ +  LLGY   +K +R +N  +  +E S  
Sbjct: 954  KPNVSYFRVFGSKCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSD 1013

Query: 1020 VRFDDKLDSDQSKLV-------EKFADLSISVSDKGKALEEAEPEEDDP----------- 1061
            V FD+   S + ++V       E     +I     G+   + + E D P           
Sbjct: 1014 VVFDETNGSPREQVVDCDDVDEEDVPTAAIRTMAIGEVRPQEQDERDQPSSSTMVHPPTE 1073

Query: 1062 -----------EEAGPSDSQ-----------PRKKSRIIASHPKELILGNKDEPVRTRSA 1099
                       ++ G  D Q            + ++ I   HP + ILG+  + V TRS 
Sbjct: 1074 DDEQVPQVEALDQGGAQDDQVMEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSR 1133

Query: 1100 FRPSEETLLSMKGLVSLIEPKSIDEALQDKDWILAMEEEVNEFSKNDVWSLVKKPQSVHV 1159
                          VS IEP  ++EAL D DW+LAM+EE+N F +N+VW+LV +P+  +V
Sbjct: 1134 L----VNFCEHYSFVSSIEPFRVEEALLDPDWVLAMQEELNNFKRNEVWTLVPRPKQ-NV 1188

Query: 1160 IGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNH 1219
            +GTKWVFRNK +E G V RNKARLVAKGY+Q  G+D+ ETF PVARLE+IR+L++++ +H
Sbjct: 1189 VGTKWVFRNKQDEHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHH 1248

Query: 1220 NIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERL 1279
            +  L+QMDVKSAFLNG I EEVYV QPPGFEDE+ PDHV KL K+LYGLKQAPRAWYE L
Sbjct: 1249 SFRLYQMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWYECL 1308

Query: 1280 SSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEM 1339
              FLL N F  GK D TLF KT   D+ + QIYVD IIFGS NQ  C+EFS++M  +FEM
Sbjct: 1309 RDFLLANAFKVGKADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEM 1368

Query: 1340 SMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTESTIAKTPMHPTCILEKEDAS 1399
            SMMGEL YFLG QV Q  +GT+I Q+KYT++LLK+F M ++  AKTPM      +     
Sbjct: 1369 SMMGELNYFLGFQVKQLKDGTFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGG 1428

Query: 1400 GKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNL 1459
              V QK YR MIGSLLYL ASRPD + SV +CARFQSDP+E HL AVKRILRYL  T   
Sbjct: 1429 KSVDQKAYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATPCF 1488

Query: 1460 GLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTAKAE 1519
            GL Y K S + L GY D DYAG +  RKST G CQFLG +LVSW SK+Q+++ LSTA+AE
Sbjct: 1489 GLWYPKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAE 1548

Query: 1520 YISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFI 1579
            Y++A  C  Q+LWM+  L D+    S +P+ CDN + I +++NP+ HSR KHI++++HF+
Sbjct: 1549 YVAAGQCCAQLLWMRQTLRDFGYNLSKVPLLCDNESDIRMAENPVEHSRTKHIDIRHHFL 1608

Query: 1580 RDYVQKGVLLLKFVDTDHKWADIY 1603
            RD+ QKG + +  V T+++ ADI+
Sbjct: 1609 RDHQQKGDIEVFHVSTENQLADIF 1632



 Score =  114 bits (286), Expect = 2e-23
 Identities = 124/517 (23%), Positives = 219/517 (41%), Gaps = 79/517 (15%)

Query: 12  KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTAEQKKLY 71
           KPP FDG+ + +W  ++ S        +W+I+ +G          K   S+      +  
Sbjct: 99  KPPHFDGEDYGFWSHKMRSHLFSLHPSIWEIVENGM---------KFDSSDSPMLINEQI 149

Query: 72  AQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKYESF 131
            ++ +A  +LL+++  EEY K++ L+ A  I+++LK+SHEGN     +K   +  +   F
Sbjct: 150 HRNAQATTVLLASLCREEYNKVSGLDNAKQIWDTLKISHEGNDVTMLTKMELVEGELGRF 209

Query: 132 IMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIR-VIRSLPESWMPLVTSIELTRDV 190
            M   E   + ++R + LV  IR    +  T   V+R ++RS       LV +I      
Sbjct: 210 AMIRGEEPTQTYNRLKTLVNKIRSYGSTRWTDHDVVRLMLRSFTVLDPHLVNNIRENPRY 269

Query: 191 ERMSLEELISILKCHELKRSE---MQDLRKKSIALKSKYEKAKSEKSKALQAEAEESEEA 247
            +MS EE++       +   E   + D     I          S   +AL ++  + E A
Sbjct: 270 TKMSPEEILGKFVSGRMMIKEARYVDDALNGPIHEPQPIALKASRSKEALPSKVAQIEAA 329

Query: 248 SEDSDEDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESGH 307
               +++E+ LI KR        ++  RG  +   K+++ G++       +CF+C + GH
Sbjct: 330 G--LNDEEMALIIKRF-------KTALRGRKEHPNKTKTKGKR-------SCFKCGKIGH 373

Query: 308 YKSDCPKLKKDK-------RPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMTIVKDKE 360
           + ++CP    D+         KK++K  K       E +S+   SD + +GL     +K 
Sbjct: 374 FIANCPDNDSDQEKKSGKWEKKKNYKKAKGEAHIGKEWDSDCSSSDSDNEGLAATAFNKS 433

Query: 361 ------------AESKEV--PDSDSASEEDPNSDDENEV-----FASFSTSELK--HALS 399
                       A+ K+V   +S  AS  +  S DE+EV     F     S++   + L 
Sbjct: 434 TLFPNERHTCLMAKEKKVCTRNSTYASSSEDESSDEDEVDYSCLFKGLDRSKIDKINELI 493

Query: 400 DIMDKYNSLLTKHKKLKKDFSAASKTPSEHEKIISELKNDNHALVNSNSVLKNQIANLEE 459
           D +++ N LL K +              EH+K +   K+           L  +I    E
Sbjct: 494 DALNEKNILLEKQE---------DSLYEEHDKFVEAQKS-----------LALEIKR-NE 532

Query: 460 IIACDASDCKNESKYEKSFQRFL-AKSVDRSLMASMI 495
           ++AC+ S C +     KS    L AK V+ +   S +
Sbjct: 533 MLACEVSTCHDSISNLKSINDDLNAKLVEANKSNSCV 569


>UniRef100_Q9SXB2 T28P6.8 protein [Arabidopsis thaliana]
          Length = 1352

 Score =  672 bits (1735), Expect = 0.0
 Identities = 364/890 (40%), Positives = 512/890 (56%), Gaps = 23/890 (2%)

Query: 727  KCL-LSVNEEQWV*HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKV 785
            +CL +   EE W+ H R GH +   +  LS+  +VRGLP +   +  +CE C  GK  K+
Sbjct: 455  QCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKM 513

Query: 786  PFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHS 845
             F  ++     +PLEL+H D+ GP+K +S+G   Y ++ +DD+SR TWV FL  K E   
Sbjct: 514  SFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFE 573

Query: 846  VFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVER 905
            +F  F A V+ E    I  +RSD GGEF + +F    +  GI    + PR+PQQNGVVER
Sbjct: 574  IFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVER 633

Query: 906  KNRTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISY 965
            KNRT+ EMAR+ML+   + K  WAE V  A Y+ NR   + +  KTP E W   KP +S+
Sbjct: 634  KNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSH 693

Query: 966  FHSFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDK 1025
               FG + +     ++  K D KS K + +GY + SKG++ YN D K    S ++ FD++
Sbjct: 694  LRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEE 753

Query: 1026 LDSDQSKLVEKFADLSISVSDKGKALEEAEP-EEDDPEEAGPSDSQPRKKSRIIASHPKE 1084
             + D +   E +        D+ +   E  P EE       P+ SQ  + S         
Sbjct: 754  GEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESS--------- 804

Query: 1085 LILGNKDEPVRTRSAFRPSEETL----LSMKGLVSLIEPKSIDEALQDKDWILAMEEEVN 1140
                  +   R RS     E T     L++  L +  EP    +A++ K W  AM+EE+ 
Sbjct: 805  -----SERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIK 859

Query: 1141 EFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETF 1200
               KND W L   P     IG KWV++ K N KG+V R KARLVAKGYSQ+ GIDY E F
Sbjct: 860  SIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVF 919

Query: 1201 VPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFK 1260
             PVARLE +RL+IS +  +   +HQMDVKSAFLNG + EEVY+ QP G+  +   D V +
Sbjct: 920  APVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLR 979

Query: 1261 LKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGS 1320
            LKK LYGLKQAPRAW  R+  +  E +F++   +  L+ K  K+DILI  +YVD +IF  
Sbjct: 980  LKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTG 1039

Query: 1321 ANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMTES 1380
             N S+ +EF K M  EFEM+ +G + Y+LGI+V Q   G +I Q  Y KE+LKKF M +S
Sbjct: 1040 NNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDS 1099

Query: 1381 TIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHLCARFQSDPRE 1440
                TPM     L K++    V    ++ ++GSL YLT +RPD L++V + +R+   P  
Sbjct: 1100 NPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTT 1159

Query: 1441 THLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNL 1500
            TH  A KRILRY+KGT N GL Y  TS+YKL GY D D+ GD   RKST G   ++G   
Sbjct: 1160 THFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTA 1219

Query: 1501 VSWASKRQSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQI-LESNIPIYCDNTAAISL 1559
             +W SK+Q  + LST +AEY++A  C    +W+++ L++  +  E    I+ DN +AI+L
Sbjct: 1220 FTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIAL 1279

Query: 1560 SKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY-KALSR 1608
            +KNP+ H R+KHI+ +YH+IR+ V K  + L++V T  + AD + K L R
Sbjct: 1280 AKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKR 1329



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 73/336 (21%), Positives = 156/336 (45%), Gaps = 22/336 (6%)

Query: 14  PMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTAEQKKLYAQ 73
           P+     ++ W  R+++  LG   D+W+I+  G+  P +       + +   + +K   +
Sbjct: 11  PVLTKSNYDNWSLRMKAI-LGAH-DVWEIVEKGFIEPENEGSLSQTQKDGLRDSRK---R 65

Query: 74  HHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKYESFIM 133
             KA  ++   +  + ++K+ +   A   +E L+ S++G  +VK+ +  +L  ++E+  M
Sbjct: 66  DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125

Query: 134 EPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIELTRDVERM 193
           +  E + + FSR   +   ++   +       + +V+RSL   +  +VT IE T+D+E M
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185

Query: 194 SLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESEEASEDSDE 253
           ++E+L+  L+ +E K+ + +D+ ++ + +    +  K E  ++ Q               
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIVEQVLNM----QITKEENGQSYQRRGGGQVRGRGRGGY 241

Query: 254 DELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESGHYKSDC- 312
                     ++  +  ++  RG GK   KS      KSS+K   C+ C + GHY S+C 
Sbjct: 242 GNGRGWRPHEDNTNQRGENSSRGRGKGHPKSR---YDKSSVK---CYNCGKFGHYASECK 295

Query: 313 -PKLKKDKRPKKHFKTK-----KSLMVTFDESESED 342
            P  KK +    + + K       LM ++ + E ++
Sbjct: 296 APSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQKE 331


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.322    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,643,192,421
Number of Sequences: 2790947
Number of extensions: 112551079
Number of successful extensions: 477970
Number of sequences better than 10.0: 7178
Number of HSP's better than 10.0 without gapping: 2360
Number of HSP's successfully gapped in prelim test: 5098
Number of HSP's that attempted gapping in prelim test: 442358
Number of HSP's gapped (non-prelim): 24931
length of query: 1622
length of database: 848,049,833
effective HSP length: 141
effective length of query: 1481
effective length of database: 454,526,306
effective search space: 673153459186
effective search space used: 673153459186
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)