BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0344.4
         (242 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q6Z3S5 Hypothetical protein OSJNBa0025J22.29 [Oryza sa...   105  1e-21
UniRef100_Q8H6Q8 CTV.20 [Poncirus trifoliata]                          74  2e-12
UniRef100_P15631 Movement protein [Soybean chlorotic mottle virus]     49  9e-05
UniRef100_Q88438 ORF I protein [Strawberry vein banding virus]         49  1e-04
UniRef100_Q91QY3 Movement protein [Grapevine berry inner necrosi...    45  0.002
UniRef100_Q84684 Putative cell-to-cell transport protein [Peanut...    42  0.011
UniRef100_Q7TD13 Putative movement protein [Cestrum yellow leaf ...    39  0.089
UniRef100_Q9E7N8 4b protein [Lettuce necrotic yellows virus]           36  0.98
UniRef100_Q6AUA8 Hypothetical protein P0017D10.13 [Oryza sativa]       36  0.98
UniRef100_Q8IIS2 Hypothetical protein [Plasmodium falciparum]          36  0.98
UniRef100_Q8TH17 DEXX-box atpase [Pyrococcus furiosus]                 35  1.3
UniRef100_Q80836 Putative movement protein [Heracleum latent virus]    35  1.7
UniRef100_Q8I2P4 Hypothetical protein PFI1300c [Plasmodium falci...    35  1.7
UniRef100_Q5ZF41 Movement protein [Carnation etched ring virus]        35  2.2
UniRef100_Q96808 Putative movement protein [Grapevine virus B]         35  2.2
UniRef100_P05396 Movement protein [Carnation etched ring virus]        35  2.2
UniRef100_Q5ZF42 Movement protein [Carnation etched ring virus]        34  2.9
UniRef100_Q9LI56 EST AU055734(S20025) corresponds to a region of...    34  2.9
UniRef100_P27739 50.8 kDa protein [Apple chlorotic leaf spot virus]    34  2.9
UniRef100_O12659 50K protein [Apple chlorotic leaf spot virus]         34  3.7

>UniRef100_Q6Z3S5 Hypothetical protein OSJNBa0025J22.29 [Oryza sativa]
          Length = 1275

 Score =  105 bits (261), Expect = 1e-21
 Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 34/231 (14%)

Query: 11  NNSEENDSNLEQKLQNWSIPKIRTNQVYKTSIFEFNPDYEIKTVEKSFAVQGPYQRISIL 70
           N S  +  ++E+ + NW IPK+   ++Y         + EI ++                
Sbjct: 5   NASSISFEDIEKSISNWKIPKVNIKEIYHV-------EREINSIRAK------------- 44

Query: 71  DSRIVNQHVRKYRDLHIGLVQLAVKPLTRLRYCDLPILICLRDKRMLRFHESVLAVLECN 130
                     +Y  LH GL+Q+A++ LTR +  ++ +L CLRD R  RF +S+L ++E +
Sbjct: 45  ---------HQYHYLHFGLIQVAIRSLTR-KGLNVSVLACLRDCRNKRFKDSLLGMVEAS 94

Query: 131 IQNGPAYFNCFPSYPVCLRDPHVTTCVDLDIKIPNEMFIDGIPPVSIMYRFCYKVTDNLS 190
           + NGP YFN FP + V L D ++   + L+++        G   +S+ YR  YK    L+
Sbjct: 95  LSNGPVYFNTFPDFSVSLSDTNIHKVLTLNLQTSGYDLEPGSENISVTYRVYYKAMTTLA 154

Query: 191 GIKAVRDYTVNE-TEVTEINAENSSRITRKILKHDEITYPQEWLQGCSSQP 240
                + YT    T + + N  N   I  K LK DEIT P++W+   + +P
Sbjct: 155 --PCAKHYTPKGLTTLLQTNPNNRHTIP-KTLKWDEITLPEKWVLSQAVEP 202


>UniRef100_Q8H6Q8 CTV.20 [Poncirus trifoliata]
          Length = 3148

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 2/150 (1%)

Query: 94  VKPLTRLRYCDLPILICLRDKRMLRFHESVLAVLECNIQNGPAYFNCFPSYPVCLRDPHV 153
           +KPLT+    D  IL  LRD R + F +S+L+ +E ++  GP  F+C+P+  + L+D +V
Sbjct: 102 IKPLTK-EGLDTSILAVLRDGRFISFDDSLLSSIESSLCKGPIPFDCYPNITISLKDKNV 160

Query: 154 TTCVDLDIKIPNEMFIDGIPPVSIMYRFCYKVTDNLSGIKAVRDYTVNETEVTEINAENS 213
              + L IK  N   I G  PV+++++  YK   +    +       +ET + + +   +
Sbjct: 161 LKSMILQIKTHNYKMIKGSIPVALIFKISYKAMVSAFSTQHRFQSKRDETLLLQTDLSRA 220

Query: 214 SRITRKILKHDEITYPQEW-LQGCSSQPAP 242
           + +  K ++  +I  P+EW L+G +    P
Sbjct: 221 NTVIPKPIQWKDINLPEEWILEGAAPPTIP 250


>UniRef100_P15631 Movement protein [Soybean chlorotic mottle virus]
          Length = 303

 Score = 49.3 bits (116), Expect = 9e-05
 Identities = 42/152 (27%), Positives = 75/152 (48%), Gaps = 6/152 (3%)

Query: 72  SRIVNQHVRKYRDLHIGLVQLAVKPLTRLRYCDLPILICLRDKRMLRFHESVLAVLECNI 131
           S+I  +  R  R +HI  +Q+ +K  T L+  D P+ + LRD R+L   ES +AV   N+
Sbjct: 89  SKIEEKQRRLIRYVHISTLQVLIKS-TFLKGLDTPLELTLRDNRLLNLEESKIAVGHGNL 147

Query: 132 QNGPAYFNCFPSYPVCLRDPHVTTCVDLDIKIPNEMFI-DGIPPVSIMYRFCYKVTDNLS 190
           + G   F+      + L+D  +   + L+ K     F+ +G    SI YR  Y ++++  
Sbjct: 148 KYGKMKFDVNLQLGLSLKDLDLDRSIILNYKFLRRNFMKEGNHAFSISYRINYALSNSHH 207

Query: 191 GI--KAVRDYTVNE--TEVTEINAENSSRITR 218
            +  K      ++E  +EV E+     S++T+
Sbjct: 208 SVEFKQKEKIYIDELFSEVLELKHPVFSKLTK 239


>UniRef100_Q88438 ORF I protein [Strawberry vein banding virus]
          Length = 328

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)

Query: 48  DYEIKTVEKSFAVQGPYQRISILDS--RIVNQHVRKYRD-LHIGLVQLAVKPLTRLRYCD 104
           +Y I+  + +   + P+     ++S  R++    RK  D +HIG V++ +K   R    D
Sbjct: 78  EYPIEIAQANGLTEIPFFNREEIESKKRVLKPEDRKKIDFIHIGSVKIMIKSTFRTGI-D 136

Query: 105 LPILICLRDKRMLRFHESVLAVLECNIQNGPAYFNCFPSYPVCLRDPHVTTCVDL-DIKI 163
            PI + L D+RM    ++V   ++ N+  G   F   P   V LRDP +   + L     
Sbjct: 137 SPISVALLDRRMKNAKDAVFGGVKGNLSYGKLIFTYNPKISVSLRDPTINKTLTLAHFFE 196

Query: 164 PNEMFIDGIPPVSIMYRFCYKVTDN 188
             E+  +G  P +I Y+  Y ++++
Sbjct: 197 KEELMHEGNHPYTISYKIGYTLSNS 221


>UniRef100_Q91QY3 Movement protein [Grapevine berry inner necrosis virus]
          Length = 350

 Score = 44.7 bits (104), Expect = 0.002
 Identities = 34/167 (20%), Positives = 71/167 (42%), Gaps = 13/167 (7%)

Query: 33  RTNQVYKTSIFEFNPDYEIKTVEKSFAVQGPYQRISILDSRIVNQHVRKYRDLHIGLVQL 92
           R   VY+      + ++ + T+        P +++ +L+   +N        +H G + +
Sbjct: 46  RNEIVYQVEPSSISDEFRVTTIPIV-----PMEQLKLLNGSNMNY-------IHFGALSI 93

Query: 93  AVKPLTRLRYCDLPILICLRDKRMLRFHESVLAVLECNIQNGPAYFNCFPSYPVCLRDPH 152
           ++ PL + R   +     + D R     +++L     ++ +G A   C P+Y V L DP 
Sbjct: 94  SIDPLFK-RNSGVKGKAFVYDSRWNNAEQALLQAFSFDLNSGTASLICSPNYSVQLTDPR 152

Query: 153 VTTCVDLDIKIPNEMFIDGIPPVSIMYRFCYKVTDNLSGIKAVRDYT 199
           ++TC+   +   N  F +G   +S+     Y+  ++  G     D T
Sbjct: 153 LSTCLSTVLVFENLNFREGSFAISVRIGVMYRPYNSYIGDSLELDQT 199


>UniRef100_Q84684 Putative cell-to-cell transport protein [Peanut chlorotic streak
           virus]
          Length = 320

 Score = 42.4 bits (98), Expect = 0.011
 Identities = 39/178 (21%), Positives = 74/178 (40%), Gaps = 11/178 (6%)

Query: 15  ENDSNLEQKLQNWSIPKIRTNQVYKTSIFEFNPDYEIKTVEKSFAVQGPYQRISILDSR- 73
           E++  + QK+    + KI    +    I        I+     F  Q P  +IS +  R 
Sbjct: 46  ESNEGINQKI----LEKINRKNIIYNGIMCGEQSVPIEQATAKF--QAPVVKISQVQERL 99

Query: 74  --IVNQHVRKYRDLHIGLVQLAVKPLTRLRYCDLPILICLRDKRMLRFHESVLAVLECNI 131
             I     +K   +H+ +VQ+ ++   R      P++I + D R+     S+L  +E ++
Sbjct: 100 KKIKETDRKKIGFIHVNVVQIVIRSTFR-EGITTPVIIRVEDNRIQDKRYSLLGQIEGDL 158

Query: 132 QNGPAYFNCFPSYPVCLRDPHVTTCVDLDIKI-PNEMFIDGIPPVSIMYRFCYKVTDN 188
             G   FN    YP+ L       C+ +  +    ++   G  P+ + YR  Y +T++
Sbjct: 159 GYGVIKFNVTLQYPIPLITRSFNNCIGVICEFRKQDLMKQGDIPLVVCYRIAYALTNS 216


>UniRef100_Q7TD13 Putative movement protein [Cestrum yellow leaf curling virus]
          Length = 312

 Score = 39.3 bits (90), Expect = 0.089
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 72  SRIVNQHVRKYRD-LHIGLVQLAVKPLTRLRYCDLPILICLRDKRMLRFHESVLAVLECN 130
           S+I NQ  RK    +HI  +Q+ +K  T L+  D PI + + D+R+    E ++ ++  N
Sbjct: 93  SKIRNQEKRKTLSCIHISTIQIVLKS-TFLKGLDYPISLAITDERINNPKEKIIGIVHGN 151

Query: 131 IQNGPAYFNCFPSYPVCLRDPHVTTCVDLDIK-IPNEMFIDGIPPVSIMYRFCYKVTDNL 189
           +      F+    + + L +  ++  + L  K   N++  D     SI Y   Y + ++ 
Sbjct: 152 LATVTLKFSVHLGFAIPLTEEDLSRSISLTYKAYRNDLMNDQKQGFSITYAVSYALANSH 211

Query: 190 SGIK 193
             I+
Sbjct: 212 HSIQ 215


>UniRef100_Q9E7N8 4b protein [Lettuce necrotic yellows virus]
          Length = 302

 Score = 35.8 bits (81), Expect = 0.98
 Identities = 27/148 (18%), Positives = 66/148 (44%), Gaps = 7/148 (4%)

Query: 85  LHIGLVQLAVKPLTRLRYC-----DLPILICLRDKRMLRFHESVLAVLECNIQNGPAYFN 139
           LHIG + ++++PL   RY       +     + D    +  +S++++ + ++  G A + 
Sbjct: 78  LHIGCITVSIEPLLHQRYMKNFGKTIAGNCAIIDSTFRKVDQSIISLHKYDLSRGRADYV 137

Query: 140 CFPSYPVCLRDPHVTTCVDLDIKIPNEMFIDGIPPVSIMYRFCYKVTDNLSGIK--AVRD 197
            +P++ + L DP +   + + + I       G+   SI   +     + L  +    ++ 
Sbjct: 138 SYPNHCLSLTDPMIQKRLSVLLGIKGIDVEPGVELFSICIGYIVSSVNTLHPVSQLGIQG 197

Query: 198 YTVNETEVTEINAENSSRITRKILKHDE 225
             +N TE  +I+   +  I +  L +++
Sbjct: 198 VAINGTESADIDELGAEDIDQLSLSYND 225


>UniRef100_Q6AUA8 Hypothetical protein P0017D10.13 [Oryza sativa]
          Length = 950

 Score = 35.8 bits (81), Expect = 0.98
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 150 DPHVTTCVDLDIKIPNEMFIDGIPPVSIMYRFCYKVTDNLSGIKAVRDYTVNETEVTEIN 209
           D ++   + L+++  +     G   +S+ YR  YK    L+     + YT          
Sbjct: 35  DTNIHKVLTLNLQTSSYELEPGSENISVTYRVYYKAMTTLA--PCAKHYTPKGLTTLLQT 92

Query: 210 AENSSRITRKILKHDEITYPQEWLQGCSSQP 240
             N+   T K LK DEIT P++W+   + +P
Sbjct: 93  NPNNRCTTPKTLKWDEITLPEKWVLSQAVEP 123


>UniRef100_Q8IIS2 Hypothetical protein [Plasmodium falciparum]
          Length = 568

 Score = 35.8 bits (81), Expect = 0.98
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 6/58 (10%)

Query: 6   LNQHANNSEENDSNLEQKLQNWSIPKIRTNQVYKTSIFE------FNPDYEIKTVEKS 57
           L+ H + +EEN   ++  +QNW  P I  N  YK  + E       NP+Y  K +EK+
Sbjct: 427 LHSHKHETEENKKLIKNIMQNWMGPIIGINTNYKQYLKERQKRISENPEYHKKVLEKA 484


>UniRef100_Q8TH17 DEXX-box atpase [Pyrococcus furiosus]
          Length = 435

 Score = 35.4 bits (80), Expect = 1.3
 Identities = 25/81 (30%), Positives = 40/81 (48%), Gaps = 12/81 (14%)

Query: 154 TTCVDLDIKIPNEMFIDGIPPVSIMYRFCYKVTDNLSGIKAVRDYTVNETEVTEINAENS 213
           TT + L +K   ++  +GI P SI Y  C  ++D    +  + +Y     E+ EI    S
Sbjct: 58  TTLLKLIVK---KLLDEGINPRSIFYLRCDYISDYKELMNVIDEYL----EIREIEGIRS 110

Query: 214 SRITRKILKHDEITYPQEWLQ 234
           S I       DE+T+P+EW +
Sbjct: 111 SYILL-----DEVTFPREWFR 126


>UniRef100_Q80836 Putative movement protein [Heracleum latent virus]
          Length = 343

 Score = 35.0 bits (79), Expect = 1.7
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 81  KYRDLHIGLVQLAVKPLTRLRYCDLP--ILICLRDKRMLRFHESVLAVLECNIQNGPAYF 138
           K+  LHIG V ++V P  R    D+P  + I + D R     + VL+   C ++N  + F
Sbjct: 138 KFPYLHIGCVAISVIPHGR----DMPGQVSIEIVDSRYTS-GKGVLSRFGCEMKNALSAF 192

Query: 139 NCFPSYPVCLRDPHVTTCVDLDIKIPNEMFIDGIPPVSI 177
             FP Y V   D      + L +K  N    +G+ P+S+
Sbjct: 193 ARFPGYFVSAYDVIDGYTIGLKVKAKNLELHEGVRPLSL 231


>UniRef100_Q8I2P4 Hypothetical protein PFI1300c [Plasmodium falciparum]
          Length = 1922

 Score = 35.0 bits (79), Expect = 1.7
 Identities = 20/67 (29%), Positives = 34/67 (49%), Gaps = 11/67 (16%)

Query: 12   NSEENDSNLEQKLQNWSIPKIRTNQVYKTSIFEFNPDYEIKTVEKSFAVQGPYQRISILD 71
            N ++ + +L     NWS P +R N     S+F++N  Y     E+S  +   Y+ ++  D
Sbjct: 1551 NDKDTNKSLNNNYNNWSEPPLRNN----NSLFDYNNTYR----EQSNVL---YKNLNYQD 1599

Query: 72   SRIVNQH 78
            S I+N H
Sbjct: 1600 SDIINHH 1606


>UniRef100_Q5ZF41 Movement protein [Carnation etched ring virus]
          Length = 319

 Score = 34.7 bits (78), Expect = 2.2
 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 73  RIVNQHVRK-YRDLHIGLVQLAVKPLTRLRYCDLPILICLRDKRMLRFHESVLAVLECNI 131
           +I ++ VR    D+H G +++ +K   R    + PI + L D R+    +S+L     N+
Sbjct: 106 KIKDEKVRSTISDIHFGAIKVLIKARFR-EGINSPIKMALIDDRITDRQDSILGAAHGNL 164

Query: 132 QNGPAYFNCFPSYPVCLRDPHV-TTCVDLDIKIPNEMFIDGIPPVSIMYRFCYKVTDNLS 190
             G   F  +P Y   + D  +  T   +     N++   G    SI Y   Y + ++  
Sbjct: 165 VYGKFMFTVYPKYTTSILDQRLDRTLAFIHHFERNDLMRKGDKVFSITYLVAYALANSHH 224

Query: 191 GIKAVRDYTVNET-EVTEINAENSS 214
            I    DY   +  E+ ++ +E  S
Sbjct: 225 SI----DYKEKDAIEIDDVFSEIGS 245


>UniRef100_Q96808 Putative movement protein [Grapevine virus B]
          Length = 322

 Score = 34.7 bits (78), Expect = 2.2
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 65  QRISILDSRIVNQ-HVRKYRDLHIGLVQLAVKPLTRLRYCDLP--ILICLRDKRMLRFHE 121
           Q I+++D   V +     Y  LH+G V + V P  R    DL   +   LRD R L    
Sbjct: 93  QVINLMDEDFVKKIETTSYPYLHLGCVAICVIPHGR----DLKGEVEFTLRDTRFLP-RS 147

Query: 122 SVLAVLECNIQNGPAYFNCFPSYPVCLRDPHVTTCVDLDIKIPNEMFIDGIPPVSIMYRF 181
           + L    C  +   + F+ FP Y V   D      ++L ++     F +G+ P+SI    
Sbjct: 148 NPLMSFGCKAERMLSAFSAFPGYFVSTYDLIDGFTMELMVRAKGMEFEEGVRPMSIQIIP 207

Query: 182 C 182
           C
Sbjct: 208 C 208


>UniRef100_P05396 Movement protein [Carnation etched ring virus]
          Length = 319

 Score = 34.7 bits (78), Expect = 2.2
 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 73  RIVNQHVRK-YRDLHIGLVQLAVKPLTRLRYCDLPILICLRDKRMLRFHESVLAVLECNI 131
           +I ++ VR    D+H G +++ +K   R    + PI + L D R+    +S+L     N+
Sbjct: 106 KIKDEKVRSTISDIHFGAIKVLIKARFR-EGINSPIKMALIDDRITDRQDSILGAAHGNL 164

Query: 132 QNGPAYFNCFPSYPVCLRDPHV-TTCVDLDIKIPNEMFIDGIPPVSIMYRFCYKVTDNLS 190
             G   F  +P Y   + D  +  T   +     N++   G    SI Y   Y + ++  
Sbjct: 165 VYGKFMFTVYPKYTTSILDQRLDRTLAFIHHFERNDLMRKGDKVFSITYLVAYALANSHH 224

Query: 191 GIKAVRDYTVNET-EVTEINAENSS 214
            I    DY   +  E+ ++ +E  S
Sbjct: 225 SI----DYKEKDAIEIDDVFSEIGS 245


>UniRef100_Q5ZF42 Movement protein [Carnation etched ring virus]
          Length = 319

 Score = 34.3 bits (77), Expect = 2.9
 Identities = 31/133 (23%), Positives = 56/133 (41%), Gaps = 7/133 (5%)

Query: 84  DLHIGLVQLAVKPLTRLRYCDLPILICLRDKRMLRFHESVLAVLECNIQNGPAYFNCFPS 143
           D+H G +++ +K   R    + PI + L D R+    +S+L     N+  G   F  +P 
Sbjct: 118 DIHFGAIKVLIKARFR-EGINSPIKMALIDDRITDRQDSILGAAHGNLVYGKFMFTVYPK 176

Query: 144 YPVCLRDPHV-TTCVDLDIKIPNEMFIDGIPPVSIMYRFCYKVTDNLSGIKAVRDYTVNE 202
           Y   + D  +  T   +     N++   G    SI Y   Y + ++   I    DY   +
Sbjct: 177 YTTSILDQRLDRTLAFIHHFERNDLMRKGDKVFSITYLVAYALANSHHSI----DYKEKD 232

Query: 203 T-EVTEINAENSS 214
             E+ ++ +E  S
Sbjct: 233 AIEIDDVFSEIGS 245


>UniRef100_Q9LI56 EST AU055734(S20025) corresponds to a region of the predicted gene
           [Oryza sativa]
          Length = 719

 Score = 34.3 bits (77), Expect = 2.9
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 171 GIPPVSIMYRFCYKVTDNLSGIKAVRDYTVNETEVTEINAENSSRITRKILKHDEITYPQ 230
           G   +S+ YR  YK    L+     + YT            N+   T K LK DEIT P+
Sbjct: 109 GSENISVTYRVYYKAMTTLA--PCAKHYTPKGLTTLLQTNPNNRCTTPKTLKWDEITLPE 166

Query: 231 EWLQGCSSQP 240
           +W+   + +P
Sbjct: 167 KWVLSQAVEP 176


>UniRef100_P27739 50.8 kDa protein [Apple chlorotic leaf spot virus]
          Length = 460

 Score = 34.3 bits (77), Expect = 2.9
 Identities = 30/131 (22%), Positives = 57/131 (42%), Gaps = 5/131 (3%)

Query: 67  ISILDSRIVNQHVRKYRD---LHIGLVQLAVKPLTRLRYCDLPILICLRDKRMLRFHESV 123
           I ++ S  V   +RK      +H G + +++  L R +   +     + D R   F +++
Sbjct: 66  IPVIPSSEVQAVLRKRESTNYVHWGALSISIDALFR-KNAGVSGWCYVYDNRWETFEQAM 124

Query: 124 LAVLECNIQNGPAYFNCFPSYPVCLRDPHVTTCVDLDIKIPNEMFIDGIPPVSI-MYRFC 182
           L     N+ +G A     P++PV L DP ++  + + +   N  F     P+S+ +   C
Sbjct: 125 LQKFHFNLDSGSATLVTSPNFPVSLDDPGLSNSISVAVMFENLNFKFESYPISVRVGNMC 184

Query: 183 YKVTDNLSGIK 193
                 LS +K
Sbjct: 185 RFFDSFLSSVK 195


>UniRef100_O12659 50K protein [Apple chlorotic leaf spot virus]
          Length = 460

 Score = 33.9 bits (76), Expect = 3.7
 Identities = 30/131 (22%), Positives = 57/131 (42%), Gaps = 5/131 (3%)

Query: 67  ISILDSRIVNQHVRKYRD---LHIGLVQLAVKPLTRLRYCDLPILICLRDKRMLRFHESV 123
           I ++ S  V   +RK      +H G + +++  L R +   +     + D R   F +++
Sbjct: 66  IPVIPSTEVQAVLRKRESTNYVHWGALSISIDALFR-KNAGVSGWCYVYDNRWETFEQAM 124

Query: 124 LAVLECNIQNGPAYFNCFPSYPVCLRDPHVTTCVDLDIKIPNEMFIDGIPPVSI-MYRFC 182
           L     N+ +G A     P++PV L DP ++  + + +   N  F     P+S+ +   C
Sbjct: 125 LQKFHFNLDSGSATMVTSPNFPVSLDDPGLSNSISVAVMFENLNFKLESYPISVRVGNMC 184

Query: 183 YKVTDNLSGIK 193
                 LS +K
Sbjct: 185 RFFDSFLSSVK 195


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.321    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 402,808,085
Number of Sequences: 2790947
Number of extensions: 15737472
Number of successful extensions: 37945
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 37925
Number of HSP's gapped (non-prelim): 54
length of query: 242
length of database: 848,049,833
effective HSP length: 124
effective length of query: 118
effective length of database: 501,972,405
effective search space: 59232743790
effective search space used: 59232743790
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)