Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0336.2
         (88 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8L8H3 Iron-stress related protein [Citrus junos]            54  9e-07
UniRef100_Q6K1X0 Putative iron-stress related protein [Oryza sat...    44  0.001
UniRef100_Q6AWV7 At5g48335 [Arabidopsis thaliana]                      39  0.024
UniRef100_UPI00003C1DC6 UPI00003C1DC6 UniRef100 entry                  33  1.3
UniRef100_UPI0000363727 UPI0000363727 UniRef100 entry                  32  3.0
UniRef100_UPI0000363726 UPI0000363726 UniRef100 entry                  32  3.0
UniRef100_UPI0000278F9B UPI0000278F9B UniRef100 entry                  32  3.0
UniRef100_UPI00004670AA UPI00004670AA UniRef100 entry                  32  3.9
UniRef100_UPI000028E55E UPI000028E55E UniRef100 entry                  32  3.9
UniRef100_UPI0000363CCD UPI0000363CCD UniRef100 entry                  32  5.0
UniRef100_Q8FFI9 Phosphate acetyltransferase [Escherichia coli O6]     32  5.0
UniRef100_UPI0000339794 UPI0000339794 UniRef100 entry                  31  6.6
UniRef100_Q86JI7 Similar to Homo sapiens (Human). Myotubularin-r...    31  6.6
UniRef100_UPI000029951A UPI000029951A UniRef100 entry                  31  8.6
UniRef100_Q6LFF0 Hypothetical protein [Plasmodium falciparum]          31  8.6
UniRef100_Q6II10 HDC20086 [Drosophila melanogaster]                    31  8.6
UniRef100_Q95Z20 Asparagine-rich protein [Plasmodium falciparum]       31  8.6

>UniRef100_Q8L8H3 Iron-stress related protein [Citrus junos]
          Length = 166

 Score = 53.9 bits (128), Expect = 9e-07
 Identities = 38/89 (42%), Positives = 52/89 (57%), Gaps = 8/89 (8%)

Query: 2   DRLNRTNSI-GNDLEKNQVASSRNVQVQDHIDAVSSILVNENHYSRFVALDGCSCSCSCS 60
           DR +R++++ GND EKNQ+A+SRN  V DH D+ SS   N N   R V L+G       S
Sbjct: 39  DRFDRSSNLYGNDGEKNQLAASRNAAVTDHGDSGSSNFANVNSQPRLVPLEG------FS 92

Query: 61  CSAASQLLNDRWTAAIQSYNN-SKDSSEK 88
            S  +QLL DR  A    +++ S D SE+
Sbjct: 93  RSEGAQLLKDRGRAIWNLFHDPSIDLSER 121


>UniRef100_Q6K1X0 Putative iron-stress related protein [Oryza sativa]
          Length = 158

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 31/89 (34%), Positives = 46/89 (50%), Gaps = 8/89 (8%)

Query: 2   DRLNRTNSI-GNDLEKNQVASSRNVQVQDHIDAVSSILVNENHYSRFVALDGCSCSCSCS 60
           DR  + + +  ND EK+   S +N+      +   S   N+   +R + L+GC  S    
Sbjct: 29  DRAEKASYLYNNDGEKSHAPSLKNLPPIIPHETFFSNPQNDYSQTRLIPLEGCCAS---- 84

Query: 61  CSAASQLLNDRWTAAIQSYNN-SKDSSEK 88
              A+QLLNDRW AA+  YN+ S DS +K
Sbjct: 85  --EAAQLLNDRWAAAMNLYNDQSYDSPDK 111


>UniRef100_Q6AWV7 At5g48335 [Arabidopsis thaliana]
          Length = 114

 Score = 39.3 bits (90), Expect = 0.024
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 17/85 (20%)

Query: 5  NRTNSIGNDLEKNQVASSRNVQVQDHIDAVSSILVNENHYSRFVALDGCSCSCSCSCSAA 64
          NR  S G+    N+  SS++V V             EN   + ++++GCS S       A
Sbjct: 31 NRRRSRGS-FHSNEGESSQSVAVG---------FQRENSSPKIISVEGCSRS------EA 74

Query: 65 SQLLNDRWTAAIQSYNN-SKDSSEK 88
           QLL+DRWTAA+  YN+ S D SE+
Sbjct: 75 FQLLSDRWTAAMHLYNDPSVDLSER 99


>UniRef100_UPI00003C1DC6 UPI00003C1DC6 UniRef100 entry
          Length = 934

 Score = 33.5 bits (75), Expect = 1.3
 Identities = 19/58 (32%), Positives = 30/58 (50%), Gaps = 2/58 (3%)

Query: 31  IDAVSSILVNENHYSRFVALDGCSCSCSCSCSAASQLLNDRWTAAIQSYNNSKDSSEK 88
           I+A S   V+E           CSCSCSCSCS +S  +++   A+   Y+++  +  K
Sbjct: 760 INAASVDKVSEWVDQETAVSPACSCSCSCSCSCSSTAMDE--LASDSGYSSASHTEGK 815


>UniRef100_UPI0000363727 UPI0000363727 UniRef100 entry
          Length = 278

 Score = 32.3 bits (72), Expect = 3.0
 Identities = 12/16 (75%), Positives = 12/16 (75%)

Query: 53  CSCSCSCSCSAASQLL 68
           CSC CSC CS  SQLL
Sbjct: 225 CSCCCSCCCSCCSQLL 240


>UniRef100_UPI0000363726 UPI0000363726 UniRef100 entry
          Length = 325

 Score = 32.3 bits (72), Expect = 3.0
 Identities = 12/16 (75%), Positives = 12/16 (75%)

Query: 53  CSCSCSCSCSAASQLL 68
           CSC CSC CS  SQLL
Sbjct: 137 CSCCCSCCCSCCSQLL 152



 Score = 32.3 bits (72), Expect = 3.0
 Identities = 12/16 (75%), Positives = 12/16 (75%)

Query: 53  CSCSCSCSCSAASQLL 68
           CSC CSC CS  SQLL
Sbjct: 270 CSCCCSCCCSCCSQLL 285


>UniRef100_UPI0000278F9B UPI0000278F9B UniRef100 entry
          Length = 409

 Score = 32.3 bits (72), Expect = 3.0
 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 5   NRTNSIGNDLEKNQVASSRNVQVQDHI-DAVSSILVNEN 42
           N+ NSIG    KN++ S +NVQ ++ I DA+ SI V +N
Sbjct: 352 NQPNSIGGKELKNKLNSFKNVQYKEDIFDAIKSISVKKN 390


>UniRef100_UPI00004670AA UPI00004670AA UniRef100 entry
          Length = 343

 Score = 32.0 bits (71), Expect = 3.9
 Identities = 13/31 (41%), Positives = 19/31 (60%)

Query: 2  DRLNRTNSIGNDLEKNQVASSRNVQVQDHID 32
          D +N T    NDL+KNQ+  S+  Q  +H+D
Sbjct: 58 DEINNTRDYCNDLDKNQIDHSQYNQYAEHVD 88


>UniRef100_UPI000028E55E UPI000028E55E UniRef100 entry
          Length = 210

 Score = 32.0 bits (71), Expect = 3.9
 Identities = 11/17 (64%), Positives = 14/17 (81%)

Query: 48  VALDGCSCSCSCSCSAA 64
           ++L  CSCSCSCSCS +
Sbjct: 111 ISLCSCSCSCSCSCSCS 127



 Score = 31.2 bits (69), Expect = 6.6
 Identities = 11/15 (73%), Positives = 13/15 (86%)

Query: 53  CSCSCSCSCSAASQL 67
           CSCSCSCSCS ++ L
Sbjct: 148 CSCSCSCSCSCSALL 162



 Score = 30.8 bits (68), Expect = 8.6
 Identities = 11/16 (68%), Positives = 12/16 (74%)

Query: 53  CSCSCSCSCSAASQLL 68
           CSCSCSCSCS +   L
Sbjct: 146 CSCSCSCSCSCSCSAL 161


>UniRef100_UPI0000363CCD UPI0000363CCD UniRef100 entry
          Length = 172

 Score = 31.6 bits (70), Expect = 5.0
 Identities = 11/13 (84%), Positives = 12/13 (91%)

Query: 53  CSCSCSCSCSAAS 65
           CSCSCSCSCS +S
Sbjct: 148 CSCSCSCSCSCSS 160


>UniRef100_Q8FFI9 Phosphate acetyltransferase [Escherichia coli O6]
          Length = 714

 Score = 31.6 bits (70), Expect = 5.0
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 10  IGNDLEKNQVASSRNVQVQDHIDAVSSILVNENHYSRFVAL 50
           +GN  E N+VA+S+ V++   I+ V   +V EN+  R V L
Sbjct: 435 LGNPAEINRVAASQGVELGAGIEIVDPEVVRENYVGRLVEL 475


>UniRef100_UPI0000339794 UPI0000339794 UniRef100 entry
          Length = 182

 Score = 31.2 bits (69), Expect = 6.6
 Identities = 18/39 (46%), Positives = 25/39 (63%), Gaps = 1/39 (2%)

Query: 5   NRTNSIGNDLEKNQVASSRNVQVQDH-IDAVSSILVNEN 42
           N+ NSI   + KN++ S  NVQ ++  IDA+ SI V EN
Sbjct: 125 NQPNSIKGKVLKNKLNSFENVQYKESIIDAIKSIPVKEN 163


>UniRef100_Q86JI7 Similar to Homo sapiens (Human). Myotubularin-related protein 2
           [Dictyostelium discoideum]
          Length = 1693

 Score = 31.2 bits (69), Expect = 6.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 4   LNRTNSIGNDL--EKNQVASSRNVQVQDHIDAVSSILVNENHYS 45
           +N TNSI   L    +Q   + N+Q  + ++ + + +VN NHYS
Sbjct: 178 INSTNSIQKKLLLSNDQPVKTYNLQSNESLELIPNYIVNANHYS 221


>UniRef100_UPI000029951A UPI000029951A UniRef100 entry
          Length = 278

 Score = 30.8 bits (68), Expect = 8.6
 Identities = 18/39 (46%), Positives = 25/39 (63%), Gaps = 1/39 (2%)

Query: 5   NRTNSIGNDLEKNQVASSRNVQVQDH-IDAVSSILVNEN 42
           N+ NSI   + K+++ S  NVQ +D  IDA+ SI V EN
Sbjct: 221 NQPNSIKGKVLKSKLNSFENVQYRDSIIDAIKSIPVKEN 259


>UniRef100_Q6LFF0 Hypothetical protein [Plasmodium falciparum]
          Length = 3248

 Score = 30.8 bits (68), Expect = 8.6
 Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 2   DRLNRTNSIGNDLEKNQVASSRNVQVQDHIDAVSSI-----LVNENHYSRFVALDGCSCS 56
           D +N  ++I N    N V +  NV   +++D ++++     + N N+ +R   +   + +
Sbjct: 224 DNINNVDNINNVDNINNVDNINNVDNINNVDNINNMNNMYHMNNINYMNRINNMSYLNNT 283

Query: 57  CSCSCSAASQLLNDRWTAAIQSYNNSKDSSEK 88
              +C      +ND     + SYNN+ +  E+
Sbjct: 284 IPLNCINVFNHINDNLRNNLISYNNNNNDDEQ 315


>UniRef100_Q6II10 HDC20086 [Drosophila melanogaster]
          Length = 174

 Score = 30.8 bits (68), Expect = 8.6
 Identities = 9/21 (42%), Positives = 12/21 (56%)

Query: 52  GCSCSCSCSCSAASQLLNDRW 72
           GC C C C CS   ++L  +W
Sbjct: 140 GCGCGCGCGCSVEVRMLMRKW 160


>UniRef100_Q95Z20 Asparagine-rich protein [Plasmodium falciparum]
          Length = 541

 Score = 30.8 bits (68), Expect = 8.6
 Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 2   DRLNRTNSIGNDLEKNQVASSRNVQVQDHIDAVSSI-----LVNENHYSRFVALDGCSCS 56
           D +N  ++I N    N V +  NV   +++D ++++     + N N+ +R   +   + +
Sbjct: 221 DNINNVDNINNVDNINNVDNINNVDNINNVDNINNMNNMYHMNNINYMNRINNMSYLNNT 280

Query: 57  CSCSCSAASQLLNDRWTAAIQSYNNSKDSSEK 88
              +C      +ND     + SYNN+ +  E+
Sbjct: 281 IPLNCINVFNHINDNLRNNLISYNNNNNDDEQ 312


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.311    0.121    0.347 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,022,901
Number of Sequences: 2790947
Number of extensions: 3772132
Number of successful extensions: 11620
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 11373
Number of HSP's gapped (non-prelim): 186
length of query: 88
length of database: 848,049,833
effective HSP length: 64
effective length of query: 24
effective length of database: 669,429,225
effective search space: 16066301400
effective search space used: 16066301400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)


Lotus: description of TM0336.2