BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0314.9
(344 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9SAJ0 F23A5.2 [Arabidopsis thaliana] 613 e-174
UniRef100_Q6ZBS9 Putative RAE1 (RNA export 1, S.pombe) homolog [... 608 e-173
UniRef100_Q8RYM1 MRNA-associated protein mrnp41-like [Oryza sativa] 582 e-165
UniRef100_Q38942 Hypothetical rae1-like protein At1g80670 [Arabi... 367 e-100
UniRef100_UPI0000270473 UPI0000270473 UniRef100 entry 364 2e-99
UniRef100_UPI000001A791 UPI000001A791 UniRef100 entry 349 6e-95
UniRef100_UPI00003AC317 UPI00003AC317 UniRef100 entry 346 5e-94
UniRef100_Q6P037 Similar to RAE1 RNA export 1 homolog [Brachydan... 341 2e-92
UniRef100_Q7ZZY7 Rae1/Gle2 [Xenopus laevis] 340 4e-92
UniRef100_Q7ZWF0 Similar to RAE1 RNA export 1 homolog [Brachydan... 339 6e-92
UniRef100_P78406 mRNA-associated protein mrnp 41 [Homo sapiens] 338 2e-91
UniRef100_Q6V708 RNA export 1-like protein [Homo sapiens] 337 2e-91
UniRef100_Q8C570 Mus musculus 16 days neonate cerebellum cDNA, R... 337 3e-91
UniRef100_UPI00001CF3D5 UPI00001CF3D5 UniRef100 entry 337 4e-91
UniRef100_Q8CBU3 Mus musculus adult male urinary bladder cDNA, R... 328 1e-88
UniRef100_UPI0000434379 UPI0000434379 UniRef100 entry 323 6e-87
UniRef100_Q7JVX4 LD40776p [Drosophila melanogaster] 322 7e-87
UniRef100_Q7Q0B6 ENSANGP00000011676 [Anopheles gambiae str. PEST] 317 4e-85
UniRef100_Q9GRX8 RAE1 [Chironomus tentans] 316 7e-85
UniRef100_P41838 Poly(A)+ RNA export protein [Schizosaccharomyce... 314 3e-84
>UniRef100_Q9SAJ0 F23A5.2 [Arabidopsis thaliana]
Length = 349
Score = 613 bits (1582), Expect = e-174
Identities = 281/349 (80%), Positives = 319/349 (90%), Gaps = 5/349 (1%)
Query: 1 MSTF--LSNTNQNPNKSFEVNQPPSDSVSSLCFSPKANLLVATSWDNQVRCWEVARN--- 55
M+TF + N NPNKS+EV P+DS+SSL FSP+A++LVATSWDNQVRCWE++R+
Sbjct: 1 MATFGAPATANSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGAS 60
Query: 56 VATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDI 115
+A+APKASISHDQPVLCSAWKDDGTTVFSGGCDKQ KMWPLLSGGQP+TVAMH+ P+ +
Sbjct: 61 LASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAM 120
Query: 116 AWIPEMSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVY 175
AWIP M+LL TGSWD+T+KYWDTRQ NPVHTQQLP++CY +SVKHPLMVVGTADRN++V+
Sbjct: 121 AWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVF 180
Query: 176 NLQNPQVEFKRIISPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCH 235
NLQNPQ EFKRI SPLKYQTRC+ AFPDQQGFLVGSIEGRVGVHHLDDSQQ KNFTFKCH
Sbjct: 181 NLQNPQTEFKRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCH 240
Query: 236 REGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNNDG 295
R+GN+IYSVNSLNFHPVH TFATAGSDGAFNFWDKDSKQRLKAM RC+QPIPCS+FN+DG
Sbjct: 241 RDGNDIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDG 300
Query: 296 SIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPRIGATGRK 344
SI+AY+ CYDWSKGAENHNP TAK++I+LHLPQESEVK KPR+GATGRK
Sbjct: 301 SIYAYAACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVGATGRK 349
>UniRef100_Q6ZBS9 Putative RAE1 (RNA export 1, S.pombe) homolog [Oryza sativa]
Length = 342
Score = 608 bits (1567), Expect = e-173
Identities = 285/344 (82%), Positives = 311/344 (89%), Gaps = 2/344 (0%)
Query: 1 MSTFLSNTNQNPNKSFEVNQPPSDSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAP 60
M+T N NPNKSFEV P DSVSSL FSPK+NLLVATSWDNQVRCWE+ ++ P
Sbjct: 1 MATLGLAPNMNPNKSFEVLPNPGDSVSSLSFSPKSNLLVATSWDNQVRCWEIVGG-SSQP 59
Query: 61 KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPE 120
KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQ TVAMHDAPVK+IAWIP+
Sbjct: 60 KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAQTVAMHDAPVKEIAWIPQ 119
Query: 121 MSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNP 180
M+LLV+GSWD+T++YWDTRQ NPVH QQLPERCYA++V +PLM+VGTADRN++V+NLQNP
Sbjct: 120 MNLLVSGSWDKTLRYWDTRQSNPVHVQQLPERCYALTVNYPLMIVGTADRNLVVFNLQNP 179
Query: 181 QVEFKRIISPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCHREGNE 240
Q EFKRI SPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHH+DDSQQ KNFTFKCHREGN+
Sbjct: 180 QTEFKRIQSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHIDDSQQSKNFTFKCHREGND 239
Query: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNNDGSIFAY 300
I+SVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKA RC PIPCS FN+DGSIFAY
Sbjct: 240 IFSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAFSRCPLPIPCSTFNSDGSIFAY 299
Query: 301 SVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPRIGATGRK 344
+VCYDWS+GAENHNP TAKT+IYLH PQESEVKGKPRI AT RK
Sbjct: 300 AVCYDWSRGAENHNPATAKTSIYLHSPQESEVKGKPRI-ATSRK 342
>UniRef100_Q8RYM1 MRNA-associated protein mrnp41-like [Oryza sativa]
Length = 344
Score = 582 bits (1500), Expect = e-165
Identities = 262/330 (79%), Positives = 294/330 (88%)
Query: 9 NQNPNKSFEVNQPPSDSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQ 68
N NPNKS EVN P DSVSSL FSPKAN LVATSWDNQVRCWE+ KASISHDQ
Sbjct: 12 NNNPNKSLEVNPAPGDSVSSLSFSPKANHLVATSWDNQVRCWEIQPGGQCQAKASISHDQ 71
Query: 69 PVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGS 128
PVLCSAWKDDGTTVFSGGCDKQ+KMWPLLSGGQPM ++ H+APVK++AWIP+M+LLV+GS
Sbjct: 72 PVLCSAWKDDGTTVFSGGCDKQIKMWPLLSGGQPMVLSGHEAPVKELAWIPQMNLLVSGS 131
Query: 129 WDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVEFKRII 188
WD+T++YWD RQP P H QQLPERCYA+S+ +PLMVVGTADRN++V+N+QNPQ EFKRI+
Sbjct: 132 WDKTLRYWDVRQPQPAHVQQLPERCYALSLSYPLMVVGTADRNVIVFNMQNPQAEFKRIV 191
Query: 189 SPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCHREGNEIYSVNSLN 248
SPLK QTRCLAAFPDQQGFLVGSIEGRVGVHH+DD QQGKNFTFKCHR+GN+IY+VN+LN
Sbjct: 192 SPLKLQTRCLAAFPDQQGFLVGSIEGRVGVHHVDDGQQGKNFTFKCHRDGNDIYAVNALN 251
Query: 249 FHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNNDGSIFAYSVCYDWSK 308
FHPVHHTFAT+GSDG FNFWDKDSKQRLKA +C PI CS FN DGSIFAY+VCYDWSK
Sbjct: 252 FHPVHHTFATSGSDGGFNFWDKDSKQRLKAFNKCPSPITCSTFNQDGSIFAYAVCYDWSK 311
Query: 309 GAENHNPTTAKTNIYLHLPQESEVKGKPRI 338
GAE HNP+TAKTNI+LH QESEVKGKPR+
Sbjct: 312 GAEKHNPSTAKTNIFLHSVQESEVKGKPRV 341
>UniRef100_Q38942 Hypothetical rae1-like protein At1g80670 [Arabidopsis thaliana]
Length = 251
Score = 367 bits (943), Expect = e-100
Identities = 181/293 (61%), Positives = 211/293 (71%), Gaps = 47/293 (16%)
Query: 1 MSTF--LSNTNQNPNKSFEVNQPPSDSVSSLCFSPKANLLVATSWDNQVRCWEVARN--- 55
M+TF + N NPNKS+EV P+DS+SSL FSP+A++LVATSWDNQVRCWE++R+
Sbjct: 1 MATFGAPATANSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGAS 60
Query: 56 VATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDI 115
+A+APKASISHDQPVLCSAWKDDGTTVFSGGCDKQ KMWPLLSGGQP+TVAMH+ P+ +
Sbjct: 61 LASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAM 120
Query: 116 AWIPEMSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVY 175
AWIP M+LL TGSWD+T+KYWDTRQ NPVHTQQLP++CY +SVKHPLMVVGTADRN++V+
Sbjct: 121 AWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVF 180
Query: 176 NLQNPQVEFKRIISPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCH 235
NLQNPQ EFKRI SPLKYQTRC+ AFPDQQGFL C
Sbjct: 181 NLQNPQTEFKRIQSPLKYQTRCVTAFPDQQGFL----------------------ELACS 218
Query: 236 REGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPC 288
+ + DGAFNFWDKDSKQRLK C + C
Sbjct: 219 LDAYIL--------------------DGAFNFWDKDSKQRLKVFSSCIDFLFC 251
>UniRef100_UPI0000270473 UPI0000270473 UniRef100 entry
Length = 275
Score = 364 bits (935), Expect = 2e-99
Identities = 166/266 (62%), Positives = 205/266 (76%), Gaps = 3/266 (1%)
Query: 69 PVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGS 128
PVLCSAW DG+ VF+GGCD K W L + Q VA HD ++ +AWI ++ LLVTGS
Sbjct: 2 PVLCSAWSHDGSAVFAGGCDNIAKKWDLATN-QSTQVAKHDGAIRHMAWIEQVGLLVTGS 60
Query: 129 WDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVEFKRII 188
WDRT+KYWDTRQPNP QLPERCYA+ V HPL+VVG A+R I V+NL NPQ +K+++
Sbjct: 61 WDRTLKYWDTRQPNPALQVQLPERCYALDVTHPLLVVGCAERQIQVFNLNNPQTAYKQLL 120
Query: 189 SPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCHREG-NEIYSVNSL 247
SPLKYQTRC+A FPD+ G+L+GSIEGRV VHH++D+ Q KNFTFKCHR+G +IY+VNS+
Sbjct: 121 SPLKYQTRCVATFPDRSGYLIGSIEGRVAVHHVEDNMQSKNFTFKCHRDGTQDIYAVNSI 180
Query: 248 NFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNNDGSIFAYSVCYDWS 307
+FHP TF TAG+DG +NFWDKDSKQRLK M +CS PI C +FN DG+I+AY+V YDWS
Sbjct: 181 SFHPTFGTFVTAGADGNYNFWDKDSKQRLKNMTKCSAPISCGSFNRDGTIYAYAVSYDWS 240
Query: 308 KGAENHNPTTAKTNIYLHLPQESEVK 333
KG +N +T NIYLH E+EVK
Sbjct: 241 KGGDNALAST-PNNIYLHAVNETEVK 265
>UniRef100_UPI000001A791 UPI000001A791 UniRef100 entry
Length = 368
Score = 349 bits (896), Expect = 6e-95
Identities = 177/346 (51%), Positives = 227/346 (65%), Gaps = 22/346 (6%)
Query: 9 NQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNVATAPKASIS 65
+ NP K EV PP DS+S L FSP N L+ SW N VRCWEV N T PKA
Sbjct: 25 SHNPMKDIEVTSPPDDSISCLAFSPPTIPGNFLIGGSWANDVRCWEVQDNGQTVPKAQQM 84
Query: 66 HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWI--PEMSL 123
H PVL + W DDG+ VF+ CDK KMW L S Q M +A HD P+K I WI P S
Sbjct: 85 HTGPVLGACWSDDGSKVFTASCDKTAKMWDLNSN-QAMQIAQHDGPIKAIHWIKAPNYSC 143
Query: 124 LVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVE 183
++TGSWD+T+K+WDTR PNP+ + Q+PERCY V++P+ VV TADR ++VY L+N E
Sbjct: 144 IMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVEYPMAVVATADRGLIVYQLENQPSE 203
Query: 184 FKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGK-NFTFKCHREG 238
F+RI SPLK+Q RC+A F D+Q GF +GSIEGRV +H+++ K NFTFKCHR
Sbjct: 204 FRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263
Query: 239 -------NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAF 291
+IY+VN+++FHPVH T AT GSDG F+FWDKD++ +LK + QPI +F
Sbjct: 264 GTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACSF 323
Query: 292 NNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPR 337
N++G+IFAY+ YDWSKG E +NP K N Y+ L +E + KPR
Sbjct: 324 NHNGNIFAYASSYDWSKGHEYYNP--QKKN-YIFLRNAAE-ELKPR 365
>UniRef100_UPI00003AC317 UPI00003AC317 UniRef100 entry
Length = 368
Score = 346 bits (888), Expect = 5e-94
Identities = 183/355 (51%), Positives = 225/355 (62%), Gaps = 24/355 (6%)
Query: 2 STFLSNT--NQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNV 56
S F S T N NP K EV PP DS+S L FSP N L+A SW N VRCWEV N
Sbjct: 16 SMFGSTTADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAGSWANDVRCWEVQDNG 75
Query: 57 ATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIA 116
T PKA H PVL W DDG+ VF+ CDK KMW L S Q + +A HDAPVK I
Sbjct: 76 QTIPKAQQMHTGPVLDGCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIH 134
Query: 117 WI--PEMSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILV 174
WI P S ++TGSWD+T+K+WDTR P P+ T QLPERCY V HP+ V TA+R ++V
Sbjct: 135 WIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVHPMAAVATAERGLIV 194
Query: 175 YNLQNPQVEFKRIISPLKYQTRCLAAFPDQ----QGFLVGSIEGRVGVHHLDDSQQGK-N 229
Y L+N EF+RI SPLK+Q RC+A F D+ GF +GSIEGRV +H+++ K N
Sbjct: 195 YQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRVAIHYINPPNPAKDN 254
Query: 230 FTFKCHREG-------NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRC 282
FTFKCHR +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK +
Sbjct: 255 FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQL 314
Query: 283 SQPIPCSAFNNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPR 337
QPI FN++G+IFAY+ YDWSKG E +NP K N Y+ L +E + KPR
Sbjct: 315 DQPISACCFNHNGNIFAYASSYDWSKGHEFYNP--QKKN-YIFLRNAAE-ELKPR 365
>UniRef100_Q6P037 Similar to RAE1 RNA export 1 homolog [Brachydanio rerio]
Length = 368
Score = 341 bits (874), Expect = 2e-92
Identities = 173/346 (50%), Positives = 224/346 (64%), Gaps = 22/346 (6%)
Query: 9 NQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNVATAPKASIS 65
+ NP K EV PP DS+S L FSP N L+ SW N VRCWEV N T PKA
Sbjct: 25 SHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQTVPKAQQM 84
Query: 66 HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWI--PEMSL 123
H PVL W DDG+ VF+ CDK KMW L S Q + +A H+ P++ I WI P S
Sbjct: 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHEGPIRTIHWIKAPNYSC 143
Query: 124 LVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVE 183
++TGSWD+T+K+WDTR PNP+ + Q+PERCY V +P+ VV TA+R ++VY L+N E
Sbjct: 144 IMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPSE 203
Query: 184 FKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGK-NFTFKCHREG 238
F+RI SPLK+Q RC+A F D+Q GF +GSIEGRV +H+++ K NFTFKCHR
Sbjct: 204 FRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263
Query: 239 -------NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAF 291
+IY+VN+++FHPVH T AT GSDG F+FWDKD++ +LK + QPI F
Sbjct: 264 GTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACCF 323
Query: 292 NNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPR 337
N++G+IFAY+ YDWSKG E +NP K N Y+ L +E + KPR
Sbjct: 324 NHNGNIFAYASSYDWSKGHEYYNP--QKKN-YIFLRNAAE-ELKPR 365
>UniRef100_Q7ZZY7 Rae1/Gle2 [Xenopus laevis]
Length = 368
Score = 340 bits (871), Expect = 4e-92
Identities = 176/346 (50%), Positives = 222/346 (63%), Gaps = 22/346 (6%)
Query: 9 NQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNVATAPKASIS 65
N NP K EV PP DS+S L FSP+ N L+A SW N VRCWEV N T PKA
Sbjct: 25 NHNPMKDIEVASPPDDSISCLSFSPQTLPGNFLIAGSWANDVRCWEVQDNGQTIPKAQQM 84
Query: 66 HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWI--PEMSL 123
H PV W DDGT VF+ CDK KMW L S Q + +A HDAP+K + W+ P S
Sbjct: 85 HTGPVQDVCWSDDGTKVFTASCDKTAKMWDLNSN-QSIQIAQHDAPIKTVHWVKAPNYSC 143
Query: 124 LVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVE 183
++TGSWD+T+K+WDTR PNP+ + QLPER Y V +P+ VV TA+R ++VY L+N E
Sbjct: 144 IMTGSWDKTLKFWDTRSPNPLLSIQLPERGYCADVVYPMAVVATAERGLIVYQLENQPSE 203
Query: 184 FKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGK-NFTFKCHREG 238
F+RI SPLK+Q RC+ F D+Q GF +GSIEGRV +H+++ K NFTFKCHR
Sbjct: 204 FRRIDSPLKHQHRCVGIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263
Query: 239 -------NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAF 291
+IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK + QPI F
Sbjct: 264 GTNTAAPQDIYAVNDIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACCF 323
Query: 292 NNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPR 337
N++G+IFAYS YDWSKG E +NP K N Y+ L +E + KPR
Sbjct: 324 NHNGNIFAYSSSYDWSKGHEFYNP--QKKN-YIFLRNAAE-ELKPR 365
>UniRef100_Q7ZWF0 Similar to RAE1 RNA export 1 homolog [Brachydanio rerio]
Length = 368
Score = 339 bits (870), Expect = 6e-92
Identities = 172/346 (49%), Positives = 224/346 (64%), Gaps = 22/346 (6%)
Query: 9 NQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNVATAPKASIS 65
+ NP K EV PP +S+S L FSP N L+ SW N VRCWEV N T PKA
Sbjct: 25 SHNPMKDVEVTSPPDESISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQTVPKAQQM 84
Query: 66 HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWI--PEMSL 123
H PVL W DDG+ VF+ CDK KMW L S Q + +A H+ P++ I WI P S
Sbjct: 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHEGPIRTIHWIKAPNYSC 143
Query: 124 LVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVE 183
++TGSWD+T+K+WDTR PNP+ + Q+PERCY V +P+ VV TA+R ++VY L+N E
Sbjct: 144 IMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPSE 203
Query: 184 FKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGK-NFTFKCHREG 238
F+RI SPLK+Q RC+A F D+Q GF +GSIEGRV +H+++ K NFTFKCHR
Sbjct: 204 FRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263
Query: 239 -------NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAF 291
+IY+VN+++FHPVH T AT GSDG F+FWDKD++ +LK + QPI F
Sbjct: 264 GTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACCF 323
Query: 292 NNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPR 337
N++G+IFAY+ YDWSKG E +NP K N Y+ L +E + KPR
Sbjct: 324 NHNGNIFAYASSYDWSKGHEYYNP--QKKN-YIFLRNAAE-ELKPR 365
>UniRef100_P78406 mRNA-associated protein mrnp 41 [Homo sapiens]
Length = 368
Score = 338 bits (866), Expect = 2e-91
Identities = 176/346 (50%), Positives = 220/346 (62%), Gaps = 22/346 (6%)
Query: 9 NQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNVATAPKASIS 65
N NP K EV P DS+ L FSP N L+A SW N VRCWEV + T PKA
Sbjct: 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM 84
Query: 66 HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWI--PEMSL 123
H PVL W DDG+ VF+ CDK KMW L S Q + +A HDAPVK I WI P S
Sbjct: 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPNYSC 143
Query: 124 LVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVE 183
++TGSWD+T+K+WDTR NP+ QLPERCY V +P+ VV TA+R ++VY L+N E
Sbjct: 144 VMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSE 203
Query: 184 FKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGK-NFTFKCHREG 238
F+RI SPLK+Q RC+A F D+Q GF +GSIEGRV +H+++ K NFTFKCHR
Sbjct: 204 FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263
Query: 239 -------NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAF 291
+IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK + QPI F
Sbjct: 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCF 323
Query: 292 NNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPR 337
N++G+IFAY+ YDWSKG E +NP K N Y+ L +E + KPR
Sbjct: 324 NHNGNIFAYASSYDWSKGHEFYNP--QKKN-YIFLRNAAE-ELKPR 365
>UniRef100_Q6V708 RNA export 1-like protein [Homo sapiens]
Length = 368
Score = 337 bits (865), Expect = 2e-91
Identities = 176/346 (50%), Positives = 220/346 (62%), Gaps = 22/346 (6%)
Query: 9 NQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNVATAPKASIS 65
N NP K EV P DS+ L FSP N L+A SW N VRCWEV + T PKA
Sbjct: 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM 84
Query: 66 HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWI--PEMSL 123
H PVL W DDG+ VF+ CDK KMW L S Q + +A HDAPVK I WI P S
Sbjct: 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQVIQIAQHDAPVKTIHWIKAPNYSC 143
Query: 124 LVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVE 183
++TGSWD+T+K+WDTR NP+ QLPERCY V +P+ VV TA+R ++VY L+N E
Sbjct: 144 VMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSE 203
Query: 184 FKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGK-NFTFKCHREG 238
F+RI SPLK+Q RC+A F D+Q GF +GSIEGRV +H+++ K NFTFKCHR
Sbjct: 204 FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263
Query: 239 -------NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAF 291
+IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK + QPI F
Sbjct: 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCF 323
Query: 292 NNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPR 337
N++G+IFAY+ YDWSKG E +NP K N Y+ L +E + KPR
Sbjct: 324 NHNGNIFAYASSYDWSKGHEFYNP--QKKN-YIFLRNAAE-ELKPR 365
>UniRef100_Q8C570 Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
enriched library, clone:9630054N05 product:RAE1 RNA
export 1 homolog (S. pombe), full insert sequence [Mus
musculus]
Length = 368
Score = 337 bits (864), Expect = 3e-91
Identities = 180/355 (50%), Positives = 224/355 (62%), Gaps = 24/355 (6%)
Query: 2 STFLSNT--NQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNV 56
S F S T N NP K EV P DS+ L FSP N L+A SW N VRCWEV +
Sbjct: 16 SMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG 75
Query: 57 ATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIA 116
T PKA H PVL W DDG+ VF+ CDK KMW L S Q + +A HDAPVK I
Sbjct: 76 QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIH 134
Query: 117 WI--PEMSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILV 174
WI P S ++TGSWD+T+K+WDTR NP+ QLPERCY V +P+ VV TA+R ++V
Sbjct: 135 WIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIV 194
Query: 175 YNLQNPQVEFKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGK-N 229
Y L+N EF+RI SPLK+Q RC+A F D+Q GF +GSIEGRV +H+++ K N
Sbjct: 195 YQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN 254
Query: 230 FTFKCHREG-------NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRC 282
FTFKCHR +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK +
Sbjct: 255 FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQL 314
Query: 283 SQPIPCSAFNNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPR 337
QPI FN++G+IFAY+ YDWSKG E +NP K N Y+ L +E + KPR
Sbjct: 315 DQPIAACCFNHNGNIFAYASSYDWSKGHEFYNP--QKKN-YIFLRNAAE-ELKPR 365
>UniRef100_UPI00001CF3D5 UPI00001CF3D5 UniRef100 entry
Length = 368
Score = 337 bits (863), Expect = 4e-91
Identities = 179/355 (50%), Positives = 224/355 (62%), Gaps = 24/355 (6%)
Query: 2 STFLSNT--NQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNV 56
S F S T N NP K EV P DS+ L FSP N L+A SW N VRCWEV +
Sbjct: 16 SMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG 75
Query: 57 ATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIA 116
T PKA H PVL W DDG+ VF+ CDK KMW L S Q + +A HDAPVK I
Sbjct: 76 QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIH 134
Query: 117 WI--PEMSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILV 174
WI P S ++TGSWD+T+K+WDTR NP+ QLPERCY V +P+ VV TA+R ++V
Sbjct: 135 WIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIV 194
Query: 175 YNLQNPQVEFKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGK-N 229
Y L+N EF+RI SPLK+Q RC+A F D+Q GF +GSIEGRV +H+++ K N
Sbjct: 195 YQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN 254
Query: 230 FTFKCHREG-------NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRC 282
FTFKCHR +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK +
Sbjct: 255 FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQL 314
Query: 283 SQPIPCSAFNNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPR 337
QP+ FN++G+IFAY+ YDWSKG E +NP K N Y+ L +E + KPR
Sbjct: 315 DQPVAACGFNHNGNIFAYASSYDWSKGHEFYNP--QKKN-YIFLRNAAE-ELKPR 365
>UniRef100_Q8CBU3 Mus musculus adult male urinary bladder cDNA, RIKEN full-length
enriched library, clone:9530008M12 product:RAE1 RNA
export 1 homolog (S. pombe), full insert sequence [Mus
musculus]
Length = 341
Score = 328 bits (842), Expect = 1e-88
Identities = 168/326 (51%), Positives = 208/326 (63%), Gaps = 20/326 (6%)
Query: 2 STFLSNT--NQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNV 56
S F S T N NP K EV P DS+ L FSP N L+A SW N VRCWEV +
Sbjct: 16 SMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG 75
Query: 57 ATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIA 116
T PKA H PVL W DDG+ VF+ CDK KMW L S Q + +A HDAPVK I
Sbjct: 76 QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIH 134
Query: 117 WI--PEMSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILV 174
WI P S ++TGSWD+T+K+WDTR NP+ QLPERCY V +P+ VV TA+R ++V
Sbjct: 135 WIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIV 194
Query: 175 YNLQNPQVEFKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGK-N 229
Y L+N EF+RI SPLK+Q RC+A F D+Q GF +GSIEGRV +H+++ K N
Sbjct: 195 YQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN 254
Query: 230 FTFKCHREG-------NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRC 282
FTFKCHR +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK +
Sbjct: 255 FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQL 314
Query: 283 SQPIPCSAFNNDGSIFAYSVCYDWSK 308
QPI FN++G+IFAY+ YDWSK
Sbjct: 315 DQPIAACCFNHNGNIFAYASSYDWSK 340
>UniRef100_UPI0000434379 UPI0000434379 UniRef100 entry
Length = 352
Score = 323 bits (827), Expect = 6e-87
Identities = 171/345 (49%), Positives = 213/345 (61%), Gaps = 19/345 (5%)
Query: 6 SNTNQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNVATAPKA 62
+++ NP + FEV PP DSVSSL FSP + N LVA SWD VRCWEV ++ T PK+
Sbjct: 12 TSSTSNPMQDFEVVSPPDDSVSSLAFSPASIPQNFLVAGSWDCNVRCWEVEQSGKTVPKS 71
Query: 63 SISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEM- 121
S PVL W DDGT VF CDK K W L S Q + VA HDAP+K WI
Sbjct: 72 MQSMAAPVLDVCWSDDGTKVFMASCDKTAKCWDLASN-QAIQVAAHDAPIKTCHWIKAST 130
Query: 122 -SLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNP 180
S L+TGSWD+T+++WD R P P T L ERCY V +P+ VVGTA R ++VY L+
Sbjct: 131 YSCLMTGSWDKTLRFWDLRSPKPAMTINLIERCYCADVDYPMAVVGTAGRGLIVYQLEGS 190
Query: 181 QVEFKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGKNFTFKCHR 236
E+K + LKYQ RC+A F D++ GF +GS EGRV +HHL+ S + +NFTFKCHR
Sbjct: 191 PREYKTVELSLKYQYRCVAIFKDKKKVPTGFAIGSTEGRVAIHHLNLSSK-ENFTFKCHR 249
Query: 237 EGN------EIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSA 290
+IY+VN + FHPVH T AT G DG F FWDKD++ +LK+ QPI
Sbjct: 250 TNGTPNGYQDIYAVNDIAFHPVHGTVATVGGDGTFGFWDKDARTKLKSSEPMEQPITRCC 309
Query: 291 FNNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGK 335
FN++G IFAY+V YDWSKG E +NP AK N P E+K K
Sbjct: 310 FNHNGQIFAYAVSYDWSKGHEYYNP--AKKNSIFLRPCFEELKPK 352
>UniRef100_Q7JVX4 LD40776p [Drosophila melanogaster]
Length = 360
Score = 322 bits (826), Expect = 7e-87
Identities = 168/335 (50%), Positives = 213/335 (63%), Gaps = 16/335 (4%)
Query: 4 FLSNTNQNPNKSFEVNQPPSDSVSSLCFSPKA---NLLVATSWDNQVRCWEVARNVATAP 60
F + + N FEV PP DSVS+L FSP N LVA SWD+ VRCWEV +N AT P
Sbjct: 16 FGATQSTNRMNDFEVASPPDDSVSALEFSPSTVQKNFLVAGSWDSTVRCWEVEQNGATVP 75
Query: 61 KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWI-- 118
K+ + PVL W DDG+ VF CDKQVK+W L S Q M VA HD PVK +
Sbjct: 76 KSMKTMGGPVLDVCWSDDGSKVFVASCDKQVKLWDLASD-QVMQVAAHDGPVKTCHMVKG 134
Query: 119 PEMSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQ 178
P + L+TGSWD+T+K+WDTR PNP+ T LPERCY V++P+ VVGTA+R +++Y+LQ
Sbjct: 135 PTYTCLMTGSWDKTLKFWDTRSPNPMMTINLPERCYCADVEYPMAVVGTANRGLIIYSLQ 194
Query: 179 NPQVEFKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGKNFTFKC 234
N E+KR SPLKYQ R ++ F D++ G +GSIEGRV + +++ NFTFKC
Sbjct: 195 NSPTEYKRQESPLKYQHRAISIFRDKKKEPTGCALGSIEGRVAIQYVNPGNPKDNFTFKC 254
Query: 235 HREG-----NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCS 289
HR +IY+VN + FHPVH T T GSDG F+FWDKD++ +LK+ Q I
Sbjct: 255 HRTTGTSGYQDIYAVNDIAFHPVHGTLVTVGSDGTFSFWDKDARTKLKSSETMDQSITKC 314
Query: 290 AFNNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYL 324
FN +G IFAY+V YDWSKG E NP K I+L
Sbjct: 315 GFNANGQIFAYAVGYDWSKGHEYFNP-AKKPQIFL 348
>UniRef100_Q7Q0B6 ENSANGP00000011676 [Anopheles gambiae str. PEST]
Length = 361
Score = 317 bits (811), Expect = 4e-85
Identities = 163/333 (48%), Positives = 213/333 (63%), Gaps = 16/333 (4%)
Query: 6 SNTNQNPNKSFEVNQPPSDSVSSLCFSP---KANLLVATSWDNQVRCWEVARNVATAPKA 62
+ T NP K FEV PP D+VS++ FSP + N L+A SWD VRCWEV ++ T PK+
Sbjct: 18 ATTTTNPMKDFEVTSPPEDTVSAMEFSPATLQQNFLIAGSWDCSVRCWEVEQSGKTVPKS 77
Query: 63 SISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIP--E 120
+ PVL W DDG+ VF DKQVK W L S Q VA HDA +K WI
Sbjct: 78 IKTMGGPVLDVCWADDGSKVFIASTDKQVKCWDLASD-QVAQVAQHDAAIKTCHWIKGTN 136
Query: 121 MSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNP 180
+ L+TGSWD+T+K+WDTR P P+ + QLPERCY V +P+ VVGTA R++L+Y+L+N
Sbjct: 137 YTCLMTGSWDKTLKFWDTRTPQPMMSIQLPERCYCADVDYPMAVVGTAGRHVLIYSLENK 196
Query: 181 QVEFKRIISPLKYQTRCLAAFPDQQ----GFLVGSIEGRVGVHHLDDSQQGKNFTFKCHR 236
+FK+ SPLKYQ R ++ F D++ G+ +GSIEGRV + ++ NFTFKCHR
Sbjct: 197 PTQFKQQESPLKYQHRTVSVFRDKKKAPTGYALGSIEGRVAIQYVSPLNPKDNFTFKCHR 256
Query: 237 EG-----NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAF 291
+IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK+ Q I F
Sbjct: 257 SNGSSGYQDIYAVNDIAFHPVHGTLATVGSDGTFSFWDKDARTKLKSSETLDQSITKCCF 316
Query: 292 NNDGSIFAYSVCYDWSKGAENHNPTTAKTNIYL 324
N++G IFAY+V YDWSKG E +NP KT I+L
Sbjct: 317 NSNGQIFAYAVGYDWSKGHEYYNP-QKKTYIFL 348
>UniRef100_Q9GRX8 RAE1 [Chironomus tentans]
Length = 349
Score = 316 bits (809), Expect = 7e-85
Identities = 159/328 (48%), Positives = 207/328 (62%), Gaps = 17/328 (5%)
Query: 4 FLSNTNQNPNKSFEVNQPPSDSVSSLCFSPKA----NLLVATSWDNQVRCWEVARNVATA 59
F N NP K EV PP D++S++ FSP N L+A SWD VRCWEVA +T
Sbjct: 2 FPQNNQSNPMKDIEVTAPPDDTISAMKFSPATSLPKNFLLAGSWDCSVRCWEVADTGSTI 61
Query: 60 PKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWI- 118
PKA + PVL +W DDGT F G DK ++W L + Q M VA HD VK W+
Sbjct: 62 PKAMKTMTAPVLDVSWHDDGTKAFIAGADKTGRVWDL-AADQVMQVAAHDNTVKTCHWVK 120
Query: 119 -PEMSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNL 177
P S L+TGSWD+T+K+WD RQPNP+ LPERCY V++P+ VVGTA+R++++Y+L
Sbjct: 121 APNYSCLMTGSWDKTLKFWDLRQPNPILQFALPERCYTADVEYPMAVVGTANRHVIIYSL 180
Query: 178 QNPQVEFKRIISPLKYQTRCLAAFPDQQ-----GFLVGSIEGRVGVHHLDDSQQGKNFTF 232
+N E+KR SPLKYQ RC++ F D + G+ +GSIEGRV + +L+ NFTF
Sbjct: 181 ENQPQEYKRHESPLKYQHRCVSIFNDMKKKAPAGYALGSIEGRVAIQYLNPVNPKDNFTF 240
Query: 233 KCHREG-----NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIP 287
KCHR +IY+VN + FHP+H T T GSDG F+FWDKD++ +LK+ Q I
Sbjct: 241 KCHRVNGTANFQDIYAVNDIAFHPIHGTLVTVGSDGTFSFWDKDARTKLKSSETLDQSIT 300
Query: 288 CSAFNNDGSIFAYSVCYDWSKGAENHNP 315
AF+ G IFAY+V YDWSKG E +NP
Sbjct: 301 KCAFSASGHIFAYAVGYDWSKGHEYYNP 328
>UniRef100_P41838 Poly(A)+ RNA export protein [Schizosaccharomyces pombe]
Length = 352
Score = 314 bits (804), Expect = 3e-84
Identities = 162/342 (47%), Positives = 210/342 (61%), Gaps = 9/342 (2%)
Query: 5 LSNTNQNPNKSFEVNQPPSDSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASI 64
+SN + K EV QPP DS+S L FSP+A L A+SWD++VR +EV + KA
Sbjct: 12 VSNATGDLKKDVEVAQPPEDSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQSIGKALY 71
Query: 65 SHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMS-- 122
H PVL W DGT V SG DK K++ + +G Q VA HD V+ + ++ M
Sbjct: 72 EHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQTG-QNQQVAAHDDAVRCVRFVEAMGTS 130
Query: 123 -LLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQ 181
+L TGSWD+T+KYWD RQ P+ T LPER YAM HPL+ V TA+RNI V NL P
Sbjct: 131 PILATGSWDKTLKYWDLRQSTPIATVSLPERVYAMDCVHPLLTVATAERNICVINLSEPT 190
Query: 182 VEFKRIISPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCHRE--GN 239
FK +SPLK+QTR LA F G+ +GS+EGR + ++D+ +NF+F+CHR GN
Sbjct: 191 KIFKLAMSPLKFQTRSLACFIKGDGYAIGSVEGRCAIQNIDEKNASQNFSFRCHRNQAGN 250
Query: 240 --EIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNNDGSI 297
++YSVNS+ FHP + TF+TAGSDG F+FWDKDS QRLK+ I CS FN G I
Sbjct: 251 SADVYSVNSIAFHPQYGTFSTAGSDGTFSFWDKDSHQRLKSYPNVGGTISCSTFNRTGDI 310
Query: 298 FAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPRIG 339
FAY++ YDWSKG N I LH + E+K +P+ G
Sbjct: 311 FAYAISYDWSKG-YTFNNAQLPNKIMLHPVPQDEIKPRPKKG 351
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.318 0.132 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 633,295,484
Number of Sequences: 2790947
Number of extensions: 27484137
Number of successful extensions: 86321
Number of sequences better than 10.0: 4174
Number of HSP's better than 10.0 without gapping: 1829
Number of HSP's successfully gapped in prelim test: 2388
Number of HSP's that attempted gapping in prelim test: 61277
Number of HSP's gapped (non-prelim): 17071
length of query: 344
length of database: 848,049,833
effective HSP length: 128
effective length of query: 216
effective length of database: 490,808,617
effective search space: 106014661272
effective search space used: 106014661272
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0314.9