BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0304.9
(156 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q76HJ4 Probable acinetobactin biosynthesis protein [Ac... 32 3.9
UniRef100_UPI00003ABB61 UPI00003ABB61 UniRef100 entry 32 5.0
UniRef100_Q88F59 Microcin b17 processing protein mcbd, putative ... 32 6.6
UniRef100_P37092 Heat shock protein 70 homolog [Sugar beet yello... 32 6.6
UniRef100_UPI00003CC1BB UPI00003CC1BB UniRef100 entry 31 8.6
UniRef100_UPI00003CACC6 UPI00003CACC6 UniRef100 entry 31 8.6
UniRef100_UPI00003CA9FF UPI00003CA9FF UniRef100 entry 31 8.6
UniRef100_UPI00003CA0F9 UPI00003CA0F9 UniRef100 entry 31 8.6
UniRef100_Q723I5 Conserved domain protein [Listeria monocytogenes] 31 8.6
UniRef100_Q71XY8 Hypothetical protein [Listeria monocytogenes] 31 8.6
UniRef100_Q8Y9R4 Lmo0459 protein [Listeria monocytogenes] 31 8.6
UniRef100_Q9M1P3 Protein kinase-like protein [Arabidopsis thaliana] 31 8.6
>UniRef100_Q76HJ4 Probable acinetobactin biosynthesis protein [Acinetobacter
baumannii]
Length = 383
Score = 32.3 bits (72), Expect = 3.9
Identities = 29/118 (24%), Positives = 52/118 (43%), Gaps = 9/118 (7%)
Query: 20 SYFITLTNLSNHLVYSY-DGGGAEEHMFRVPVDHTFFFD-TQHSSLQLHLYNKRRILGPT 77
+YF + + + Y GG E +MF + F D T +SS H Y+ R+I
Sbjct: 72 AYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARELFPDSTLYSSKDTH-YSVRKIAKLL 130
Query: 78 QLGWCMIPALDIGFLNLRDSAAVRYLSYRLRATDGCRSDIIINLSVKLLGSPDTCQTV 135
Q+ C+I +LD G ++ D L ++++ I N+ + G+ D + +
Sbjct: 131 QMKSCVIESLDNGEIDYDD------LIHKIKTNKESHPIIFANIGTTMTGAIDDIEMI 182
>UniRef100_UPI00003ABB61 UPI00003ABB61 UniRef100 entry
Length = 115
Score = 32.0 bits (71), Expect = 5.0
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 52 HTFFFDTQHSSLQLHLYNKRRILGPTQLGWCMIPALDIGFLNLRDSAAVRYLSYRLRATD 111
HTF F HS + H KR+I LGW P L L AA + L L +
Sbjct: 26 HTFIFSLCHSVCRCHSLQKRQI--AESLGWSPPPLLLPSLAAL--LAAAQLLGLTL-SQH 80
Query: 112 GCRSDIII-NLSVKLLGSP 129
G R ++I ++S+ LL SP
Sbjct: 81 GVRCSLVITSISIYLLPSP 99
>UniRef100_Q88F59 Microcin b17 processing protein mcbd, putative [Pseudomonas putida]
Length = 400
Score = 31.6 bits (70), Expect = 6.6
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 58 TQHSSLQLHLYNKRRILGPTQLGWCMIPALDIGFLNLRDSAAVRYLSYRLRATDGCRSDI 117
++ SSLQ H +++ + T C +P + ++S + Y +R T GC + I
Sbjct: 98 SEKSSLQSHCFDRTTVYRVTDFTSCKVPTACLSISECKNSTDNGF--YPIRDTCGCSAHI 155
Query: 118 IINLSV 123
IN +V
Sbjct: 156 TINNAV 161
>UniRef100_P37092 Heat shock protein 70 homolog [Sugar beet yellow virus]
Length = 598
Score = 31.6 bits (70), Expect = 6.6
Identities = 26/102 (25%), Positives = 45/102 (43%), Gaps = 20/102 (19%)
Query: 32 LVYSYDGGGAEEHMFRVPVDHTFFFDTQHSSLQL-----------HLYNKRRILGPTQLG 80
LVY + GG + + +++TF + L HLYNK ++ P
Sbjct: 201 LVYDFGGGTFDVSVISA-LNNTFVVRASGGDMNLGGRDIDKAFVEHLYNKAQL--PVNY- 256
Query: 81 WCMIPALDIGFLNLRDSAAVRYLSYRLRATDGCRSDIIINLS 122
+DI FL S V +L++ + + G R D+++N+S
Sbjct: 257 -----KIDISFLKESLSKKVSFLNFPVVSEQGVRVDVLVNVS 293
>UniRef100_UPI00003CC1BB UPI00003CC1BB UniRef100 entry
Length = 389
Score = 31.2 bits (69), Expect = 8.6
Identities = 22/76 (28%), Positives = 42/76 (54%), Gaps = 6/76 (7%)
Query: 60 HSSLQLHLYNKRRILGPTQLGWCMIPALDIGFLNLRDSAAVRYLSYRLRATDGCRSDIII 119
H SLQ++L NK + PT+ +I D F+ + D +R + + +TDG ++++
Sbjct: 316 HVSLQVNLENKTMVAVPTK---SIIEKDDDAFVYVEDKGKLRKQNVKKGSTDGDWTEVVE 372
Query: 120 NLSV--KLLGSP-DTC 132
++V K++ +P D C
Sbjct: 373 GVTVGQKVVKNPSDXC 388
>UniRef100_UPI00003CACC6 UPI00003CACC6 UniRef100 entry
Length = 512
Score = 31.2 bits (69), Expect = 8.6
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 47 RVPVDHTFFFDTQHSSLQLHLYNKRRILGPTQLGWCMIPALDIGFLNLRDSAAVRY---L 103
+V + F+ H+S Q L N I PT + DI + + V L
Sbjct: 12 KVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNL 71
Query: 104 SYRLRATDGCRSDIIINLSVK 124
SY L+ +D C +IIN ++
Sbjct: 72 SYTLKISDNCSIQLIINAYIR 92
>UniRef100_UPI00003CA9FF UPI00003CA9FF UniRef100 entry
Length = 512
Score = 31.2 bits (69), Expect = 8.6
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 47 RVPVDHTFFFDTQHSSLQLHLYNKRRILGPTQLGWCMIPALDIGFLNLRDSAAVRY---L 103
+V + F+ H+S Q L N I PT + DI + + V L
Sbjct: 12 KVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNL 71
Query: 104 SYRLRATDGCRSDIIINLSVK 124
SY L+ +D C +IIN ++
Sbjct: 72 SYTLKISDNCSIQLIINAYIR 92
>UniRef100_UPI00003CA0F9 UPI00003CA0F9 UniRef100 entry
Length = 512
Score = 31.2 bits (69), Expect = 8.6
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 47 RVPVDHTFFFDTQHSSLQLHLYNKRRILGPTQLGWCMIPALDIGFLNLRDSAAVRY---L 103
+V + F+ H+S Q L N I PT + DI + + V L
Sbjct: 12 KVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNL 71
Query: 104 SYRLRATDGCRSDIIINLSVK 124
SY L+ +D C +IIN ++
Sbjct: 72 SYTLKISDNCSIQLIINAYIR 92
>UniRef100_Q723I5 Conserved domain protein [Listeria monocytogenes]
Length = 512
Score = 31.2 bits (69), Expect = 8.6
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 47 RVPVDHTFFFDTQHSSLQLHLYNKRRILGPTQLGWCMIPALDIGFLNLRDSAAVRY---L 103
+V + F+ H+S Q L N I PT + DI + + V L
Sbjct: 12 KVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNL 71
Query: 104 SYRLRATDGCRSDIIINLSVK 124
SY L+ +D C +IIN ++
Sbjct: 72 SYTLKISDNCSIQLIINAYIR 92
>UniRef100_Q71XY8 Hypothetical protein [Listeria monocytogenes]
Length = 512
Score = 31.2 bits (69), Expect = 8.6
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 47 RVPVDHTFFFDTQHSSLQLHLYNKRRILGPTQLGWCMIPALDIGFLNLRDSAAVRY---L 103
+V + F+ H+S Q L N I PT + DI + + V L
Sbjct: 12 KVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNL 71
Query: 104 SYRLRATDGCRSDIIINLSVK 124
SY L+ +D C +IIN ++
Sbjct: 72 SYTLKISDNCSIQLIINAYIR 92
>UniRef100_Q8Y9R4 Lmo0459 protein [Listeria monocytogenes]
Length = 512
Score = 31.2 bits (69), Expect = 8.6
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 47 RVPVDHTFFFDTQHSSLQLHLYNKRRILGPTQLGWCMIPALDIGFLNLRDSAAVRY---L 103
+V + F+ H+S Q L N I PT + DI + + V L
Sbjct: 12 KVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNL 71
Query: 104 SYRLRATDGCRSDIIINLSVK 124
SY L+ +D C +IIN ++
Sbjct: 72 SYTLKISDNCSIQLIINAYIR 92
>UniRef100_Q9M1P3 Protein kinase-like protein [Arabidopsis thaliana]
Length = 472
Score = 31.2 bits (69), Expect = 8.6
Identities = 19/62 (30%), Positives = 33/62 (52%), Gaps = 2/62 (3%)
Query: 93 NLRDSAAVRYLSYRLRATDGCRSDIIINLSVKLLGSPDTCQTVIGIPVTAVRGVDKKQLA 152
+LR S ++ L +RLR G + + L +T T + +P+ A + +DKK+LA
Sbjct: 59 SLRSSLSLSDLRFRLRLGSGDIGSVFLAEFKSLTAVTET--TAVKLPLLAAKVMDKKELA 116
Query: 153 AR 154
+R
Sbjct: 117 SR 118
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.323 0.138 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 253,392,436
Number of Sequences: 2790947
Number of extensions: 10044492
Number of successful extensions: 15599
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 15599
Number of HSP's gapped (non-prelim): 12
length of query: 156
length of database: 848,049,833
effective HSP length: 116
effective length of query: 40
effective length of database: 524,299,981
effective search space: 20971999240
effective search space used: 20971999240
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0304.9