BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0290.7
(47 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q93X90 Acetyl-CoA carboxylase [Lotus corniculatus] 79 2e-14
UniRef100_Q40326 Acetyl-CoA carboxylase [Medicago sativa] 79 2e-14
UniRef100_Q84TQ6 Acetyl-coenzyme A carboxylase [Setaria italica] 78 5e-14
UniRef100_Q84K22 Plastid acetyl-CoA carboxylase [Lolium rigidum] 78 7e-14
UniRef100_Q8LRK2 Acetyl-coenzyme A carboxylase [Alopecurus myosu... 78 7e-14
UniRef100_Q8LLS0 Acetyl-CoA carboxylase [Hordeum vulgare var. di... 77 9e-14
UniRef100_Q8LLR8 Acetyl-CoA carboxylase [Secale cereale] 77 9e-14
UniRef100_O48960 Acetyl-coenzyme A carboxylase [Triticum aestivum] 77 9e-14
UniRef100_Q84TQ5 Acetyl-coenzyme A carboxylase [Setaria italica] 77 9e-14
UniRef100_Q7XYR4 Acetyl-coenzyme A carboxylase ACC1A [Zea mays] 77 9e-14
UniRef100_Q7XYR3 Acetyl-coenzyme A carboxylase ACC1B [Zea mays] 77 9e-14
UniRef100_Q41743 Acetyl-coenzyme A carboxylase [Zea mays] 77 9e-14
UniRef100_Q947M6 Acetyl-coenzyme A carboxylase [Setaria italica] 77 9e-14
UniRef100_O48959 Acetyl-coenzyme A carboxylase [Triticum aestivum] 77 9e-14
UniRef100_Q9S987 Acetyl coa carboxylase [Brassica napus] 77 1e-13
UniRef100_Q9FEH8 Acetyl-CoA carboxylase [Brassica napus] 77 1e-13
UniRef100_Q39849 Acetyl-CoA carboxylase [Glycine max] 77 1e-13
UniRef100_O04849 Acetyl-CoA carboxylase [Brassica napus] 77 1e-13
UniRef100_Q42793 Acetyl CoA carboxylase [Glycine max] 77 1e-13
UniRef100_Q9C8G1 Acetyl-CoA carboxylase, putative, 5' partial; 1... 77 2e-13
>UniRef100_Q93X90 Acetyl-CoA carboxylase [Lotus corniculatus]
Length = 57
Score = 79.3 bits (194), Expect = 2e-14
Identities = 36/43 (83%), Positives = 38/43 (87%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 15 DPDDGFKPTGGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQ 57
>UniRef100_Q40326 Acetyl-CoA carboxylase [Medicago sativa]
Length = 2257
Score = 79.3 bits (194), Expect = 2e-14
Identities = 36/43 (83%), Positives = 38/43 (87%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 441 DPDDGFTPTGGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQ 483
>UniRef100_Q84TQ6 Acetyl-coenzyme A carboxylase [Setaria italica]
Length = 2321
Score = 78.2 bits (191), Expect = 5e-14
Identities = 34/43 (79%), Positives = 39/43 (90%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF+DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFVDSQ 576
>UniRef100_Q84K22 Plastid acetyl-CoA carboxylase [Lolium rigidum]
Length = 232
Score = 77.8 bits (190), Expect = 7e-14
Identities = 34/43 (79%), Positives = 37/43 (85%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
NPD GF PTG +V+E+ FKSKPNVW YFSVKSGGGIHEF DSQ
Sbjct: 172 NPDDGFKPTGGKVKEISFKSKPNVWGYFSVKSGGGIHEFADSQ 214
>UniRef100_Q8LRK2 Acetyl-coenzyme A carboxylase [Alopecurus myosuroides]
Length = 2320
Score = 77.8 bits (190), Expect = 7e-14
Identities = 34/43 (79%), Positives = 37/43 (85%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
NPD GF PTG +V+E+ FKSKPNVW YFSVKSGGGIHEF DSQ
Sbjct: 537 NPDDGFKPTGGKVKEISFKSKPNVWGYFSVKSGGGIHEFADSQ 579
>UniRef100_Q8LLS0 Acetyl-CoA carboxylase [Hordeum vulgare var. distichum]
Length = 232
Score = 77.4 bits (189), Expect = 9e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 172 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 214
>UniRef100_Q8LLR8 Acetyl-CoA carboxylase [Secale cereale]
Length = 232
Score = 77.4 bits (189), Expect = 9e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 172 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 214
>UniRef100_O48960 Acetyl-coenzyme A carboxylase [Triticum aestivum]
Length = 619
Score = 77.4 bits (189), Expect = 9e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>UniRef100_Q84TQ5 Acetyl-coenzyme A carboxylase [Setaria italica]
Length = 2321
Score = 77.4 bits (189), Expect = 9e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>UniRef100_Q7XYR4 Acetyl-coenzyme A carboxylase ACC1A [Zea mays]
Length = 2324
Score = 77.4 bits (189), Expect = 9e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>UniRef100_Q7XYR3 Acetyl-coenzyme A carboxylase ACC1B [Zea mays]
Length = 2325
Score = 77.4 bits (189), Expect = 9e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>UniRef100_Q41743 Acetyl-coenzyme A carboxylase [Zea mays]
Length = 2325
Score = 77.4 bits (189), Expect = 9e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>UniRef100_Q947M6 Acetyl-coenzyme A carboxylase [Setaria italica]
Length = 2321
Score = 77.4 bits (189), Expect = 9e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>UniRef100_O48959 Acetyl-coenzyme A carboxylase [Triticum aestivum]
Length = 2311
Score = 77.4 bits (189), Expect = 9e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PTG +V+E+ FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 534 DPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQ 576
>UniRef100_Q9S987 Acetyl coa carboxylase [Brassica napus]
Length = 796
Score = 77.0 bits (188), Expect = 1e-13
Identities = 35/43 (81%), Positives = 37/43 (85%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PT +VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 119 DPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQ 161
>UniRef100_Q9FEH8 Acetyl-CoA carboxylase [Brassica napus]
Length = 1798
Score = 77.0 bits (188), Expect = 1e-13
Identities = 35/43 (81%), Positives = 37/43 (85%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PT +VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 436 DPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQ 478
>UniRef100_Q39849 Acetyl-CoA carboxylase [Glycine max]
Length = 1978
Score = 77.0 bits (188), Expect = 1e-13
Identities = 35/43 (81%), Positives = 37/43 (85%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PT +VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 441 DPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQ 483
>UniRef100_O04849 Acetyl-CoA carboxylase [Brassica napus]
Length = 640
Score = 77.0 bits (188), Expect = 1e-13
Identities = 35/43 (81%), Positives = 37/43 (85%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PT +VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 436 DPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQ 478
>UniRef100_Q42793 Acetyl CoA carboxylase [Glycine max]
Length = 2261
Score = 77.0 bits (188), Expect = 1e-13
Identities = 35/43 (81%), Positives = 37/43 (85%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PT +VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 441 DPDDGFKPTSGKVQELNFKSKPNVWAYFSVKSGGGIHEFSDSQ 483
>UniRef100_Q9C8G1 Acetyl-CoA carboxylase, putative, 5' partial; 1-7710 [Arabidopsis
thaliana]
Length = 1865
Score = 76.6 bits (187), Expect = 2e-13
Identities = 35/43 (81%), Positives = 36/43 (83%)
Query: 5 NPDYGFNPTGWEVQELGFKSKPNVWAYFSVKSGGGIHEFLDSQ 47
+PD GF PT VQEL FKSKPNVWAYFSVKSGGGIHEF DSQ
Sbjct: 57 DPDDGFKPTSGRVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQ 99
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.318 0.142 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,338,436
Number of Sequences: 2790947
Number of extensions: 2871617
Number of successful extensions: 4321
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4192
Number of HSP's gapped (non-prelim): 129
length of query: 47
length of database: 848,049,833
effective HSP length: 23
effective length of query: 24
effective length of database: 783,858,052
effective search space: 18812593248
effective search space used: 18812593248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0290.7