BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0290.16
(172 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O23757 Reverse transcriptase [Beta vulgaris subsp. vul... 103 1e-21
UniRef100_Q7Y1P7 Putative reverse transcriptase [Oryza sativa] 74 2e-12
UniRef100_Q5W6F4 Hypothetical protein OSJNBb0006B22.8 [Oryza sat... 73 3e-12
UniRef100_Q9XE43 Putative non-LTR retrolelement reverse transcri... 71 1e-11
UniRef100_Q7XVG0 OSJNBb0118P14.10 protein [Oryza sativa] 70 2e-11
UniRef100_Q8LK00 Putative reverse transcriptase [Sorghum bicolor] 70 2e-11
UniRef100_Q9SA04 F28K20.4 protein [Arabidopsis thaliana] 66 3e-10
UniRef100_Q9LRU8 Non-LTR retroelement reverse transcriptase-like... 65 9e-10
UniRef100_Q7DLW4 Non-ltr retrotransposon reverse transcriptase-l... 65 9e-10
UniRef100_Q7Y1F8 Putative reverse transcriptase [Oryza sativa] 64 1e-09
UniRef100_Q8LK27 Putative AP endonuclease/reverse transcriptase ... 64 1e-09
UniRef100_Q84JX8 Putative reverse transcriptase [Oryza sativa] 64 2e-09
UniRef100_O81517 T24M8.8 protein [Arabidopsis thaliana] 64 2e-09
UniRef100_Q7XSJ7 OSJNBb0078D11.8 protein [Oryza sativa] 63 3e-09
UniRef100_Q9LVQ1 Non-LTR retroelement reverse transcriptase-like... 62 6e-09
UniRef100_Q9C6L3 Hypothetical protein F2J7.11 [Arabidopsis thali... 62 6e-09
UniRef100_O65598 Hypothetical protein M3E9.210 [Arabidopsis thal... 61 1e-08
UniRef100_Q7XUD8 OSJNBa0088A01.7 protein [Oryza sativa] 61 1e-08
UniRef100_Q75M21 Hypothetical protein P0668H12.17 [Oryza sativa] 60 2e-08
UniRef100_Q9AY65 Putative reverse transcriptase [Oryza sativa] 59 4e-08
>UniRef100_O23757 Reverse transcriptase [Beta vulgaris subsp. vulgaris]
Length = 507
Score = 103 bits (258), Expect = 1e-21
Identities = 59/171 (34%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
Query: 2 FTWHRPNNQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGPKPFR 61
FTW R Q++S+LDR+ V EW T +P+ +L R SDHCP+L + Q+WGPKPFR
Sbjct: 53 FTWFR--GQSKSKLDRLFVQPEWLTSFPSLKLNILKRSPSDHCPLLAFSSHQNWGPKPFR 110
Query: 62 VLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRSRREV 121
LNCWL + ++ W K + V +KL+ L+ LK+WN++ FG + +
Sbjct: 111 FLNCWLTHPQCMKIISEIW----TKNHNS-SVPDKLRTLKEALKQWNQKEFGIIDDNIKH 165
Query: 122 VVTQINNLDLKEEEVGLDQAEVDLRKALFNDFWAILRLHESFLCQKARSKW 172
+I+ LD L E+ R + W L+ ES+ +R++W
Sbjct: 166 CEEKIHFLDNIANSRLLCTNELQERDDAQLNLWTWLKRSESYWALNSRARW 216
>UniRef100_Q7Y1P7 Putative reverse transcriptase [Oryza sativa]
Length = 1556
Score = 73.6 bits (179), Expect = 2e-12
Identities = 46/172 (26%), Positives = 88/172 (50%), Gaps = 2/172 (1%)
Query: 2 FTW-HRPNNQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGPKP- 59
FTW + NQ +LDR+LVS E+ T +P + +L R++SDH P+L +P
Sbjct: 963 FTWANHLQNQTFEKLDRILVSTEFETKFPLSTVSILTREISDHTPLLYNSGGASAAYQPQ 1022
Query: 60 FRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRSRR 119
F+ WL +V+ W+ + ++G + K++ LR L+ W + + G + +
Sbjct: 1023 FKFELGWLRRDGFSDIVKEVWQGVSIEGTPLERWQRKIRRLRQFLRGWAKNITGAYKKEK 1082
Query: 120 EVVVTQINNLDLKEEEVGLDQAEVDLRKALFNDFWAILRLHESFLCQKARSK 171
+ ++ +++ L K E L++ E++++ L + +LR E Q+A+ K
Sbjct: 1083 KELLDKLDTLVKKAEHTILNEFELNVKHVLNDRLAELLREEEIKWYQRAKVK 1134
>UniRef100_Q5W6F4 Hypothetical protein OSJNBb0006B22.8 [Oryza sativa]
Length = 1237
Score = 72.8 bits (177), Expect = 3e-12
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 2 FTW-HRPNNQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDW--GPK 58
FTW + N +LDRVL+S EW +P S + LNRD+SDH P+ L
Sbjct: 823 FTWANNLANPTYEKLDRVLMSTEWEQKFPLSSVVALNRDISDHTPLPLNTNSSSLSNAQH 882
Query: 59 PFRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRSR 118
F+ WL +V+ W + + K++ LR L+ W++ G +
Sbjct: 883 SFKFELGWLLRDGFVEMVKEIWSSVDEGNTAMERWQAKIRRLRQHLRGWSKHSSGLYKKE 942
Query: 119 REVVVTQINNLDLKEEEVGLDQAEVDLRKALFNDFWAILRLHESFLCQKARSK 171
++ ++ +++ LD K E L E+D+R N +ILR E Q+A+SK
Sbjct: 943 KKKILDKLDLLDKKAENSLLSPEELDIRWFCRNRLSSILREEEIKWYQRAKSK 995
>UniRef100_Q9XE43 Putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 855
Score = 70.9 bits (172), Expect = 1e-11
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 1 KFTWHRPNNQAQ---SRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLR---QTFQD 54
KFTW R ++ RLDRVL + W S L SDH P+ ++ + +
Sbjct: 592 KFTWKRGRVESTFVAKRLDRVLCRPQTRLKWQEASVTHLPFFASDHAPIYIQLEPEVRSN 651
Query: 55 WGPKPFRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGD 114
+PFR WL L++ SW G V L L+S LK+WNREVFGD
Sbjct: 652 PLRRPFRFEAAWLTHSGFKDLLQASWNTE-----GETPVA--LAALKSKLKKWNREVFGD 704
Query: 115 LRSRREVVVTQINNLDLKEEEVGLDQAEVDLRK--ALFNDFWAILRLHESFLCQKARSKW 172
+ R+E + +N + + +E + ++Q + L K L +F +L E QK+R KW
Sbjct: 705 VNRRKE---SLMNEIKVVQELLEINQTDNLLSKEEELIKEFDVVLEQEEVLWFQKSREKW 761
>UniRef100_Q7XVG0 OSJNBb0118P14.10 protein [Oryza sativa]
Length = 934
Score = 70.1 bits (170), Expect = 2e-11
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 1 KFTW-HRPNNQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGPKP 59
KFTW + + +LDR+L +++W +P VL R SDH P+L+ + W
Sbjct: 636 KFTWANNKQSVTLEKLDRILFNDKWEIKFPLACGRVLERIYSDHTPLLINVEGEKWLSPL 695
Query: 60 FRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRSRR 119
F+ N WL + +VE W + G + +L+ +R LK WN G + ++
Sbjct: 696 FKFENSWLMREDINTVVEQVWNSCNINGSSIDKWQWRLQKMRKKLKGWNMNWEGMYKRKK 755
Query: 120 EVVVTQINNLDLKEEEVGL 138
++ +I ++D K E G+
Sbjct: 756 HEIMEKIEDIDKKCEAYGM 774
>UniRef100_Q8LK00 Putative reverse transcriptase [Sorghum bicolor]
Length = 1323
Score = 70.1 bits (170), Expect = 2e-11
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 1 KFTWHRPN-NQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGPKP 59
K+TW N LDR + +W +P+ + + L+ +SDHCP+ L Q
Sbjct: 378 KYTWSNGRKNPTLVHLDRAFCNLDWDEIFPSATLIALSSSLSDHCPLFLCNQQQPHRRAT 437
Query: 60 FRVLNCWLGDHRLPALVENSWKDMKVKGWGAF-MVKEKLKGLRSVLKEWNREVFGDLRSR 118
F+ + W+ +V+ +W + V+G ++ +L+ LK+W++ +F + R +
Sbjct: 438 FKFESFWVRVPGFLQIVQTAWA-LPVRGSNPLTLLHNRLRNAAEALKKWSKSLFSEARLQ 496
Query: 119 REVVVTQINNLDLKEEEVGLDQAEVDLRKAL 149
E+ I LD+ +E L AEVDL + L
Sbjct: 497 LELANEVILRLDIAQESRPLSDAEVDLHRQL 527
>UniRef100_Q9SA04 F28K20.4 protein [Arabidopsis thaliana]
Length = 1253
Score = 66.2 bits (160), Expect = 3e-10
Identities = 48/178 (26%), Positives = 81/178 (44%), Gaps = 12/178 (6%)
Query: 2 FTWHRPN--NQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDH--CPVLLRQTFQDWGP 57
FTW + +LDR+LV+ W + +P+ + D SDH C V++
Sbjct: 137 FTWWNKSATRPVAKKLDRILVNESWCSRFPSAYAVFGEPDFSDHASCGVIINPLMHR-EK 195
Query: 58 KPFRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRS 117
+PFR N L + +LV W + V G F + +KLK L++ ++ ++ E F +L
Sbjct: 196 RPFRFYNFLLQNPDFISLVGELWYSINVVGSSMFKMSKKLKALKNPIRTFSMENFSNLEK 255
Query: 118 RREVVVTQINNLDLKEEEVGLDQAEVD---LRKALFNDFWAILRLHESFLCQKARSKW 172
R V + +NL L + L + L + +++ ESF CQ++R W
Sbjct: 256 R----VKEAHNLVLYRQNKTLSDPTIPNAALEMEAQRKWLILVKAEESFFCQRSRVTW 309
>UniRef100_Q9LRU8 Non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 64.7 bits (156), Expect = 9e-10
Identities = 46/178 (25%), Positives = 79/178 (43%), Gaps = 12/178 (6%)
Query: 2 FTWHRP--NNQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDH--CPVLLRQTFQDWGP 57
+TW + ++DR+LV++ W T +P+ D SDH C V+L
Sbjct: 185 YTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLK-AK 243
Query: 58 KPFRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRS 117
+PFR N +L + L+ +W V G + V +KLK L+ + ++RE + D+
Sbjct: 244 RPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEK 303
Query: 118 RREVVVTQINNLDLKEEEVGLDQAEV---DLRKALFNDFWAILRLHESFLCQKARSKW 172
R V++ + + L + + L V L + + + ESF CQK+ W
Sbjct: 304 R----VSEAHAIVLHRQRITLTNPSVVHATLELEATRKWQILAKAEESFFCQKSSISW 357
>UniRef100_Q7DLW4 Non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 64.7 bits (156), Expect = 9e-10
Identities = 46/178 (25%), Positives = 79/178 (43%), Gaps = 12/178 (6%)
Query: 2 FTWHRP--NNQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDH--CPVLLRQTFQDWGP 57
+TW + ++DR+LV++ W T +P+ D SDH C V+L
Sbjct: 185 YTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLK-AK 243
Query: 58 KPFRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRS 117
+PFR N +L + L+ +W V G + V +KLK L+ + ++RE + D+
Sbjct: 244 RPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEK 303
Query: 118 RREVVVTQINNLDLKEEEVGLDQAEV---DLRKALFNDFWAILRLHESFLCQKARSKW 172
R V++ + + L + + L V L + + + ESF CQK+ W
Sbjct: 304 R----VSEAHAIVLHRQRITLTNPSVVHATLELEATRKWQILAKAEESFFCQKSSISW 357
>UniRef100_Q7Y1F8 Putative reverse transcriptase [Oryza sativa]
Length = 1014
Score = 64.3 bits (155), Expect = 1e-09
Identities = 43/173 (24%), Positives = 70/173 (39%), Gaps = 1/173 (0%)
Query: 1 KFTWHRPNNQAQ-SRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGPKP 59
+FTW + +LDR+ + + + N + L+ SDHCP+LL T Q
Sbjct: 119 RFTWSNERDAPTLEKLDRIFCNPDGDMLFSNHNLQALSSSNSDHCPLLLSPTHQLLRKPT 178
Query: 60 FRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRSRR 119
FR N W V+ +W + KLK L+ W+ + D R +
Sbjct: 179 FRFENFWPRPPGFLDTVQTAWSQPVSASHPVKRLSSKLKATAKALRSWSNRILSDSRIQF 238
Query: 120 EVVVTQINNLDLKEEEVGLDQAEVDLRKALFNDFWAILRLHESFLCQKARSKW 172
+V I LD+ +E L E+ LRK L + + ++ Q++ W
Sbjct: 239 HLVNELILRLDIAQENRALSPLEISLRKDLKLQILGLAAVEKARRRQRSTLTW 291
>UniRef100_Q8LK27 Putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 64.3 bits (155), Expect = 1e-09
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Query: 2 FTW--HRPNNQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGP-K 58
+TW ++ NN ++DR+LV++ W P + SDHCP + + Q G K
Sbjct: 186 YTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRNK 245
Query: 59 PFRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRSR 118
PF++ N + + +W + +G F + +K K L+ ++ +NRE + L R
Sbjct: 246 PFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEKR 305
Query: 119 REVVVTQINNLDLKEEEVGLDQAE--VDLRKALFNDFWAILRLHESFLCQKARSKW 172
VV NL + + + L K + + E FLCQK+R W
Sbjct: 306 ---VVQAAQNLKTCQNNLLAAPSSYLAGLEKEAHRSWAELALAEERFLCQKSRVLW 358
>UniRef100_Q84JX8 Putative reverse transcriptase [Oryza sativa]
Length = 1349
Score = 63.9 bits (154), Expect = 2e-09
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 3/174 (1%)
Query: 1 KFTWHRPN-NQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGPKP 59
+FTW + N Q+++DR +W + + L+ SDH P+ L Q
Sbjct: 511 RFTWAKDGANPTQTKIDRAFCKPDWDILFGSAYMAALSSSSSDHAPLFLVGCEQRELNTS 570
Query: 60 FRVLNCWLGDHRLPALVENSWKDMKVKGWGAFM-VKEKLKGLRSVLKEWNREVFGDLRSR 118
FR WL + SW + ++G F + KLK L LK W++ GD+R +
Sbjct: 571 FRFEAYWLKFPEFLEVASESW-NRPIRGSNPFAKLNLKLKRLARDLKRWSKFRIGDIRLQ 629
Query: 119 REVVVTQINNLDLKEEEVGLDQAEVDLRKALFNDFWAILRLHESFLCQKARSKW 172
+ I LD+ +EE L E+ L+ L + + L + + Q+AR W
Sbjct: 630 HAIANEVIFQLDVAQEERALTDEELLLKSTLKSRVLGLATLVKIRIRQRARLTW 683
>UniRef100_O81517 T24M8.8 protein [Arabidopsis thaliana]
Length = 1164
Score = 63.5 bits (153), Expect = 2e-09
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 2 FTWHRPNNQAQ--SRLDRVLVSNEWGTFWPNCSQLVLNRDVSDH--CPVLLRQTFQDWGP 57
FTW ++A +LDR+LV+++W T +P+ L D SDH C + L
Sbjct: 85 FTWWNKRSRAPVAKKLDRILVNDKWTTTFPSSLGLFGEPDFSDHSSCELSLMSA-SPRSK 143
Query: 58 KPFRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRS 117
KPFR N L D +L+ W V G + V KLK L+ V+++++R+ + D+
Sbjct: 144 KPFRFNNFLLKDENFLSLICLKWFSTSVTGSAMYRVSVKLKALKKVIRDFSRDNYSDIEK 203
Query: 118 R 118
R
Sbjct: 204 R 204
>UniRef100_Q7XSJ7 OSJNBb0078D11.8 protein [Oryza sativa]
Length = 1636
Score = 63.2 bits (152), Expect = 3e-09
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 1/173 (0%)
Query: 1 KFTWH-RPNNQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGPKP 59
+FTW + +++D+VLV+ EW F+ + L+ SDHCP+LL P+
Sbjct: 1020 RFTWSSEQESPTLTKIDKVLVNAEWEDFFRDAHLQALSSSASDHCPLLLACDAMVHRPRR 1079
Query: 60 FRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRSRR 119
F+ WL +V +W+ + KLK + LK W +LR +
Sbjct: 1080 FKFEAFWLHLDGFDEIVRAAWESAPAGSNAFSSLHFKLKATATALKPWGAHRICELRLQL 1139
Query: 120 EVVVTQINNLDLKEEEVGLDQAEVDLRKALFNDFWAILRLHESFLCQKARSKW 172
V I LD + L E LR L A+ L L Q+AR ++
Sbjct: 1140 AVAHEVILQLDRAMDSRQLSPEERSLRAILKGRCLALASLERIRLRQRARLRY 1192
>UniRef100_Q9LVQ1 Non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 62.0 bits (149), Expect = 6e-09
Identities = 48/180 (26%), Positives = 83/180 (45%), Gaps = 16/180 (8%)
Query: 2 FTWHRPNN--QAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDH--CPVLLRQTFQDWGP 57
FTW ++ +LDR+L ++ W +P+ L N D SDH C V+L
Sbjct: 48 FTWWNKSSIRPIAKKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGIS-AK 106
Query: 58 KPFRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRS 117
+PF+ N L + +V ++W V G + V +KLK ++ +K+++R + +
Sbjct: 107 RPFKFFNFLLKNEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIEL 166
Query: 118 R----REVVVTQINNLDLKEEEVGLDQAEVDLRKALFNDFWAILR-LHESFLCQKARSKW 172
R E+++T NL L V E++ ++ W +L ESF Q++R W
Sbjct: 167 RTKEAHELLIT-CQNLTLANPSVSNAALELEAQRK-----WVLLSCAEESFFHQRSRVSW 220
>UniRef100_Q9C6L3 Hypothetical protein F2J7.11 [Arabidopsis thaliana]
Length = 1213
Score = 62.0 bits (149), Expect = 6e-09
Identities = 51/177 (28%), Positives = 82/177 (45%), Gaps = 10/177 (5%)
Query: 2 FTWHRPNNQAQ--SRLDRVLVSNEWGTFWPNCSQLVLNRDVSDH--CPVLLRQTFQDWGP 57
FTW ++ ++DR+LV++ W +P+ + + D SDH C V+L +T
Sbjct: 188 FTWWNKSHTTPVAKKIDRILVNDSWNALFPSSLGIFGSLDFSDHVSCGVVLEETSIK-AK 246
Query: 58 KPFRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRS 117
+PF+ N L + LV ++W + V G F V +KLK L+ +K+++R + +L
Sbjct: 247 RPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRLNYSELEK 306
Query: 118 R-REVVVTQINNLDLKEEEVGLDQAEVDLRKALFNDFWAIL-RLHESFLCQKARSKW 172
R +E I D + A +L W IL ESF QK+R W
Sbjct: 307 RTKEAHDFLIGCQDRTLADPTPINASFELEA---ERKWHILTAAEESFFRQKSRISW 360
>UniRef100_O65598 Hypothetical protein M3E9.210 [Arabidopsis thaliana]
Length = 1141
Score = 61.2 bits (147), Expect = 1e-08
Identities = 50/179 (27%), Positives = 79/179 (43%), Gaps = 14/179 (7%)
Query: 2 FTWHRPNNQ--AQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDH--CPVLLRQTFQDWGP 57
FTW + ++DR+LV+ W +P+ L D SDH C V+L +
Sbjct: 180 FTWWNKSKTRPVAKKIDRILVNESWSNLFPSSFGLFGPPDFSDHASCGVVL-ELDPIKAK 238
Query: 58 KPFRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRS 117
+PF+ N L + LV + W V G F V +KLK L+ +K+++R + +L
Sbjct: 239 RPFKFFNFLLKNPEFLNLVWDVWYSTNVVGSSMFRVSKKLKALKKPIKDFSRLNYSNLEK 298
Query: 118 RRE---VVVTQINNLDLKEEEVGLDQAEVDLRKALFNDFWAIL-RLHESFLCQKARSKW 172
R E + NL L + E++ ++ W IL ESF Q++R W
Sbjct: 299 RTEEAHETLLSFQNLTLDNPSLENAAHELEAQRK-----WQILATAEESFFRQRSRVTW 352
>UniRef100_Q7XUD8 OSJNBa0088A01.7 protein [Oryza sativa]
Length = 1324
Score = 60.8 bits (146), Expect = 1e-08
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
Query: 1 KFTW-HRPNNQAQSRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGPKP 59
KFTW + + RLDR + W + + L+ SDHCP+LL P+
Sbjct: 638 KFTWTNERRHPTMVRLDRFFCNENWDLAFGHHILHTLSSGTSDHCPLLLSNPQGPQRPRT 697
Query: 60 FRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRSRR 119
F+ N W V+ +W+ + +KL LK+W R + +++ +
Sbjct: 698 FKFENFWTKLPGFRTEVQLAWERTSTHHEPLHRLADKLSHTALALKKWARGICSEVKLKF 757
Query: 120 EVVVTQINNLDLKEEEVGLDQAEVDLRKAL 149
+ + I LD+ +E L QAE LR L
Sbjct: 758 HLALDVIQRLDVAQENRDLTQAEFRLRLGL 787
>UniRef100_Q75M21 Hypothetical protein P0668H12.17 [Oryza sativa]
Length = 959
Score = 60.1 bits (144), Expect = 2e-08
Identities = 42/170 (24%), Positives = 70/170 (40%), Gaps = 1/170 (0%)
Query: 1 KFTWHRPNNQAQ-SRLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGPKP 59
++TW Q +++D+VL++ EW + + L+ SDHCP+LL P+
Sbjct: 274 RYTWSSEQEQPTLTKIDKVLINGEWEEIFQDAHLQALSSSASDHCPLLLACDNMMHRPRK 333
Query: 60 FRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRSRR 119
++ + W +V +W + KLK + L+ W +LR +
Sbjct: 334 YKFESFWTKLDGFEEVVRQAWAAAPSGSNSVSSLHLKLKSTATSLRSWGARRINELRQQL 393
Query: 120 EVVVTQINNLDLKEEEVGLDQAEVDLRKALFNDFWAILRLHESFLCQKAR 169
V I LD +++ L E LR L A+ L L Q+AR
Sbjct: 394 AVAHEIILQLDKAQDDRLLSAEERSLRATLKGRCLALASLEHIRLRQRAR 443
>UniRef100_Q9AY65 Putative reverse transcriptase [Oryza sativa]
Length = 1135
Score = 59.3 bits (142), Expect = 4e-08
Identities = 38/150 (25%), Positives = 63/150 (41%), Gaps = 1/150 (0%)
Query: 1 KFTWHRPNNQAQS-RLDRVLVSNEWGTFWPNCSQLVLNRDVSDHCPVLLRQTFQDWGPKP 59
+FTW + +LD + W + + L SDHCP++L P+P
Sbjct: 289 RFTWSNERQRPTLVKLDHCFCNENWDLAFHHHVLHALPTGPSDHCPLVLSNPAAPCKPRP 348
Query: 60 FRVLNCWLGDHRLPALVENSWKDMKVKGWGAFMVKEKLKGLRSVLKEWNREVFGDLRSRR 119
FR N W +V+ SW + KL+ S +K W + +F +++ +
Sbjct: 349 FRFENFWTRISGFKDMVKASWTQPSPHTEPMRHINHKLQRTASCIKTWAKSLFTEVKIQF 408
Query: 120 EVVVTQINNLDLKEEEVGLDQAEVDLRKAL 149
+ + I LD+ +E L E+ LR AL
Sbjct: 409 HMALDVIQRLDVAQEHRDLSGPELRLRAAL 438
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.323 0.138 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 292,088,308
Number of Sequences: 2790947
Number of extensions: 11371034
Number of successful extensions: 26050
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 25939
Number of HSP's gapped (non-prelim): 120
length of query: 172
length of database: 848,049,833
effective HSP length: 118
effective length of query: 54
effective length of database: 518,718,087
effective search space: 28010776698
effective search space used: 28010776698
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0290.16