Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0283.1
         (2478 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8H6Q8 CTV.20 [Poncirus trifoliata]                         533  e-149
UniRef100_Q8S2M4 Hypothetical protein OSJNBa0090K04.9 [Oryza sat...   400  e-109
UniRef100_Q6Z3S5 Hypothetical protein OSJNBa0025J22.29 [Oryza sa...   384  e-104
UniRef100_Q7XFZ6 Hypothetical protein [Oryza sativa]                  290  5e-76
UniRef100_Q6XKE5 Polyprotein 1 [Petunia vein clearing virus]          250  4e-64
UniRef100_Q6XKE6 Polyprotein 1 [Petunia vein clearing virus]          250  4e-64
UniRef100_Q91DM0 ORF I polyprotein [Petunia vein clearing virus]      249  1e-63
UniRef100_Q83169 Reverse transcriptase [Cauliflower mosaic virus]     223  6e-56
UniRef100_Q7XRB3 OSJNBa0006B20.7 protein [Oryza sativa]               223  6e-56
UniRef100_Q7XEP7 Putative rice tungro bacilliform virus; reverse...   223  8e-56
UniRef100_P03554 Enzymatic polyprotein [Contains: Aspartic prote...   223  8e-56
UniRef100_Q02964 Enzymatic polyprotein [Contains: Aspartic prote...   223  8e-56
UniRef100_P03555 Enzymatic polyprotein [Contains: Aspartic prote...   223  8e-56
UniRef100_Q66162 ORF V [Cauliflower mosaic virus]                     222  1e-55
UniRef100_Q00962 Enzymatic polyprotein [Contains: Aspartic prote...   222  1e-55
UniRef100_Q9WI36 Reverse transcriptase [Cauliflower mosaic virus]     221  2e-55
UniRef100_P03556 Enzymatic polyprotein [Contains: Aspartic prote...   220  4e-55
UniRef100_Q7XQK4 OSJNBa0017B10.4 protein [Oryza sativa]               219  8e-55
UniRef100_Q688G8 Putative polyprotein [Oryza sativa]                  216  5e-54
UniRef100_Q7XFN9 Putative retroelement [Oryza sativa]                 211  2e-52

>UniRef100_Q8H6Q8 CTV.20 [Poncirus trifoliata]
          Length = 3148

 Score =  533 bits (1374), Expect = e-149
 Identities = 325/840 (38%), Positives = 487/840 (57%), Gaps = 56/840 (6%)

Query: 719  SSEYEYEGDED--QDINLVEYSSDSHSSSEEERECVKDSSGFCDCAGCLGQNINMLTQDQ 776
            S+  +  GD D  Q   L++  +   +SS+ E E                + IN+LT+DQ
Sbjct: 839  STSKDCNGDSDSLQIDELIDSDTSVSNSSDSESESYL-------------KKINILTKDQ 885

Query: 777  TMSLISIIDKMEDSPLRDEFLQQL--NLLVKKEETLKKDISPPIN-SMNEIFNRFRPKPT 833
              + + ++  + D  L+ E+L++L   +   K ET K  I    +  + EI ++ + K +
Sbjct: 886  E-TFLELVKHISDPNLQKEYLEKLLKTMDFNKAETSKVPIVKKNSYDLTEILDKKKTKKS 944

Query: 834  I-TLSDLQEEVKILKEEINQLKQNDLSLEFRLIELAGIKIIESQETLASASGIKQIPDKK 892
            +  + DLQ+E+K +K EI  LK+   S +   I+L   K ++      S      I  ++
Sbjct: 945  VPNIQDLQKEIKDIKSEIKDLKEKQKS-DSETIQLLLQKHLQDDSDNESTHSENHI--EQ 1001

Query: 893  NEDNNSQEPNENYLNLLNLVITHKWHSEITLVI-NDFRINIVALIDSGADINCIQEGLIP 951
            N DN    P++ +L +L  V T K+  + TL+  NDF I+ +AL D+GAD+NCI++ ++P
Sbjct: 1002 NVDNIESVPHD-FLFVLKQVTTRKYLIKATLIFSNDFAIDAIALFDTGADLNCIRQDIVP 1060

Query: 952  TQFYEKTKEGVNSANGSKMNIQYKLSNAKICKNQICFKSSFVLVKNMTEKVILGTLFICL 1011
             +F+EKTKE +++AN SK+ +  K+  A I  N   FK+SF+L  ++   VILGT FI L
Sbjct: 1061 KRFHEKTKERLSAANNSKLKVDSKVE-ASIHNNGFEFKTSFILTNDIHHAVILGTPFINL 1119

Query: 1012 LYPKVHTIALPYIDEFNEKDIPTKARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSC 1071
            + PK H + LPY + F+EK IPTKARPIQMN    ++C+EEI + + KGLI  S+SPWSC
Sbjct: 1120 ITPKQHMVDLPYENSFDEKQIPTKARPIQMNMDLERHCKEEINDLVKKGLIVKSRSPWSC 1179

Query: 1072 IGFYVLNASELERGALRLVINYKPLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSG 1131
              FYV   SE+ERG  RLVINYKPLNK LKWIRYP+PNK DL+++LH   IFSKFDMKS 
Sbjct: 1180 AAFYVNKNSEIERGTPRLVINYKPLNKALKWIRYPIPNKKDLLQKLHSAFIFSKFDMKSV 1239

Query: 1132 YYQISVREEDRYKTAFVVPFGHYEWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDD 1191
            ++QI +  ++RYKTAF VPFG YEW VMP GLKNAPSE+Q IMNDI+ PY +F IVY+DD
Sbjct: 1240 FWQIQIHPKERYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDD 1299

Query: 1192 VLVFSKGIDQHVQHLEKFIEIIKKNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSL 1251
            VL+FS  IDQH +HL+ F    +K GL +S  K+ +F+TK RFLG+ I +G ITPI+RSL
Sbjct: 1300 VLIFSNSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITPIERSL 1359

Query: 1252 EFAKKFPDELKEKTQLQRFLGCVNYVADFIPNIRIVCAPLFKRLRKN---SPPW------ 1302
             FA KFPD++ +KTQLQRFLG +NYV DF PNI  +  PL  RL+K     PP       
Sbjct: 1360 AFADKFPDKILDKTQLQRFLGSLNYVLDFCPNISRLSKPLHDRLKKKPAAMPPKRRDKGK 1419

Query: 1303 -----------SEEMSHSVREVKKLVQSLPIVTPFQIF*QENFYRVNMSEKPKSKDQY*P 1351
                       S+E   +  + K L  ++PI +  ++   E+  +  +S+   S  Q   
Sbjct: 1420 GIAKDTDSLKPSKESQSTPSKEKLLSSAMPIKSWIEMV--EDEEQKALSKSISSDQQVKE 1477

Query: 1352 PLGSSSTSKDKALAITPLKSAGSSAPATPSKSSQRLTTSQIVKTPPQNQKAPLVPLANKY 1411
             + S + S +   A   L+    S   +     ++  + +I K   Q+Q   +   ++  
Sbjct: 1478 WMESITKSPELMFA---LQGISKSKALSQIPEEEKPISKEITKLSSQSQNVVISGESSSS 1534

Query: 1412 TVLTQSSSKSPVKPESTEYFEKPEGLSSLIIEKEYFHLYPKEIATQLLPPNFQYVPGHPK 1471
             ++   S  +P K +++++F+K    + L +E  ++H  P +  ++  P ++ + P    
Sbjct: 1535 QIVL--SQPTPSK-KTSDWFDKSHFQNVLTMEHGFYHSDPFQAISKFFPQSWFFNPWDLT 1591

Query: 1472 KTRLFYEFILVDSDSIEVTH--NPDKQGEIAFSKIKIIKVLSAQDWNAPLHYFKNFSRQF 1529
            K + +Y+ IL  ++S++  H    +   E A+S   I+KVLS   W   LH +K+F   F
Sbjct: 1592 KPQSYYQSILEATESVKFKHFFLSETHSEPAYSTATILKVLSPNQWGDQLHKYKSFPPNF 1651



 Score =  372 bits (956), Expect = e-101
 Identities = 209/452 (46%), Positives = 275/452 (60%), Gaps = 24/452 (5%)

Query: 996  KNMTEKVILGTLFICLLYPKVHTIALPYIDEFNEKDIPTKARPIQMNEQYLKYCREEIGE 1055
            K + EK I   L       K H + LPY + F+EK IPTKARPIQMN    ++C+EEI +
Sbjct: 2569 KTLIEKEICADLPSAFWNRKQHMVDLPYENSFDEKQIPTKARPIQMNMDLERHCKEEIND 2628

Query: 1056 YLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYKPLNKVLKWIRYPLPNKTDLIK 1115
             + KGLI  S+SPWSC  FYV   SE+ERG  RLVINYKPLNK LKWIRYP+PNK DL++
Sbjct: 2629 LVKKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKALKWIRYPIPNKKDLLQ 2688

Query: 1116 RLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHYEWNVMPQGLKNAPSEYQNIMN 1175
            +LH   IFSKFDMKSG++QI +  +DRYKTAF VPFG YEW VMP GLKNAPSE+Q IMN
Sbjct: 2689 KLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMN 2748

Query: 1176 DIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIKKNGLVVSAKKMKIFETKTRFL 1235
            DI+ PY +F IVY+DDVL+FS  IDQH +HL+ F    +K GL +S  K+ +F+TK RFL
Sbjct: 2749 DIYNPYSDFCIVYIDDVLIFSNSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFL 2808

Query: 1236 GYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCVNYVADFIPNI------RIVCA 1289
            G+ I +G ITPI+RSL FA KFPD++ +KTQLQRFLG +NYV DF PNI      RI   
Sbjct: 2809 GHHISKGTITPIERSLAFADKFPDKILDKTQLQRFLGSLNYVLDFCPNISRFSNSRISSK 2868

Query: 1290 PLFKRLRK----------NSPPWSEEMSHSVREVKKLVQSLPIVTPFQIF*QENFYRVNM 1339
             +    R+          +S   S+E   +  + K L  ++PI +  ++   E+  +  +
Sbjct: 2869 QIMPPKRRDKGKGIAKDTDSLKPSKESQSTPSKEKLLSSAMPIKSWIEMV--EDEEQKAL 2926

Query: 1340 SEKPKSKDQY*PPLGSSSTSKDKALAITPLKSAGSSAPATPSKSSQRLTTSQIVKTPPQN 1399
            S+   S  Q    + S + S +  LA   L+    S   +     ++L + +I K   Q+
Sbjct: 2927 SKSISSDQQVKEWMESITKSPELMLA---LQGISKSKTLSQIPEEEKLISKEITKLSSQS 2983

Query: 1400 QKAPLVPLANKYTVLTQSSSKSPVKPESTEYF 1431
            Q    V ++  YT        SP     T +F
Sbjct: 2984 QN---VVISAHYTPSDSEKRFSPFLCFCTNFF 3012



 Score =  268 bits (685), Expect = 2e-69
 Identities = 179/548 (32%), Positives = 302/548 (54%), Gaps = 48/548 (8%)

Query: 491  GDPSIFRERASSQLSNLYCPTMSDYRWYKDTFFSKVTLREDGNNAFWKERFIAGLPRLMQ 550
            GDPS  R++ +  L NL C  +SD++ YK TFF+++ LR+D N+  WKE+F+A LP L+ 
Sbjct: 1963 GDPSHLRDKNAELLHNLRCRKLSDFQLYKTTFFTRLFLRDDANHTTWKEKFLACLPTLLG 2022

Query: 551  SKVLDNLSLFNQGNPINFGSLSFGQLHNTIVHTGIQVCTDFKLQNKMQKDMQISRKEVGS 610
             KV + +      N I +  L++G+L + +   G+++C D KLQ +++++++ S++E+GS
Sbjct: 2023 EKVRNFIKAL-YDNRIPYDELTYGELVSFVNKEGLKICQDLKLQKRLKQEIRQSKRELGS 2081

Query: 611  FCEQYGVEPLQAPSSK------ARRINRSKTKPQGYKK-----RKPFQKKPYEQNPSTQQ 659
            FC+Q+  +P +A +SK      + R  +   K + ++K     R+ F KKP      ++ 
Sbjct: 2082 FCKQFNYDPFKASTSKDCNGKCSSRPYKKHYKSKSHRKLFLGHRENFYKKPTRPYKKSRF 2141

Query: 660  PTNKK-NVNPK-----KKNVCWKCGKPGHYANKCKTQQKINELDLDQKLKDSLISVLINS 713
            P  K     PK     K+ +C +CG  GH A  CK  +K++EL LD  +   +  ++I S
Sbjct: 2142 PRKKDFKATPKTPFNFKEAICHRCGIKGHTAKYCKMNRKLHELGLDDDILSKIAPLMIES 2201

Query: 714  EDPHYSSEYEYEGDED--QDINLVEYSSDSHSSSEEERECVKDSSGFCDCAGCLGQNINM 771
                 +SE    GD D  Q   L++  +   +SS+ E E                + IN+
Sbjct: 2202 S----NSESSMSGDSDSLQIDELIDSDTSVSNSSDSESESYL-------------KKINV 2244

Query: 772  LTQDQTMSLISIIDKMEDSPLRDEFLQQL--NLLVKKEETLKKDISPPIN-SMNEIFNRF 828
            LT+DQ  + + ++  + D  L+ E+L++L   +   K ET K  I    +  + EI ++ 
Sbjct: 2245 LTKDQE-TFLELVKHISDPNLQKEYLEKLLKTMDFNKAETSKVPIVKKNSYDLTEILDKK 2303

Query: 829  RPKPTI-TLSDLQEEVKILKEEINQLKQNDLSLEFRLIELAGIKIIESQETLASASGIKQ 887
            + K ++  + DLQ+E+K +K EI  LK+   S +   I+L   K ++      S      
Sbjct: 2304 KTKKSVPNIQDLQKEIKDIKSEIKDLKEKQKS-DSETIQLLLQKHLQDDSDNESTHSENH 2362

Query: 888  IPDKKNEDNNSQEPNENYLNLLNLVITHKWHSEITLVI-NDFRINIVALIDSGADINCIQ 946
            I  ++N DN    P++ +L +L  V T K+  + TL+  NDF I+ +AL D+GAD+NCI+
Sbjct: 2363 I--EQNVDNIESVPHD-FLFVLKQVTTRKYLIKATLIFSNDFAIDAIALFDTGADLNCIR 2419

Query: 947  EGLIPTQFYEKTKEGVNSANGSKMNIQYKLSNAKICKNQICFKSSFVLVKNMTEKVILGT 1006
            + ++P +F+EKTKE +++AN SK+ +  K+  A I  N   FK+SF+L  ++   VILGT
Sbjct: 2420 QDIVPKRFHEKTKERLSAANNSKLKVDSKV-EASIHNNGFEFKTSFILTNDIHHAVILGT 2478

Query: 1007 LFICLLYP 1014
             FI L+ P
Sbjct: 2479 PFINLITP 2486



 Score =  243 bits (620), Expect = 5e-62
 Identities = 195/689 (28%), Positives = 332/689 (47%), Gaps = 124/689 (17%)

Query: 11  SPKQETIMLEANLKRSLVQVPKKLTHEEVMSNVPEEWVFKNSLP-------QPKVHNTQV 63
           S + ET++L+ +L R+   +PK +  +++  N+PEEW+ + + P       +P      V
Sbjct: 205 SKRDETLLLQTDLSRANTVIPKPIQWKDI--NLPEEWILEGAAPPTIPKQLEPNTELQNV 262

Query: 64  RELFQEGANLTLRMNRSNSFS-------IRTPQQLYR-----VDLPRSSV---------- 101
            +       L  R + S+ FS       I T ++ +      ++LP  S           
Sbjct: 263 TQYSDGKVKLLFRRSMSSRFSNKESCSSIPTLERKFTKIPSVINLPYQSTKSQPRFSTSD 322

Query: 102 --SSKLKGIDTTSSPSIATPIY----------QDEESSNYSPTPSQI--NMLSRVKSSFE 147
             SS +  +D T++  +  PIY          + E S   SPT S +  N+++ ++  FE
Sbjct: 323 IPSSSIHSVDYTTN--VPHPIYTSSQHVQSQEEKEPSLPTSPTFSAVTENVINIIEKEFE 380

Query: 148 INKDFIRKYFMAEYNKDKRLWYFKNFSKLETENLRTLYYEEMEVSETNIYFFD*FENYCI 207
           ++K  +   F ++ NK+K++W+FK F   + + ++ +YYE +   + +I FFD FE Y  
Sbjct: 381 LDKTLLHNDFYSDLNKEKKIWFFKQFLN-QRKEIQQIYYEFVNFHKVHILFFDWFEIYSS 439

Query: 208 KNNLNYPFWKNVNPITKIDTI--WKTPDNN-TITSEYPPQTGVKIAIKDGQ---EIEASP 261
           +NN+ YPF K  NPIT    I  WK  D++ TI SE+PP     + I  G+   +I ASP
Sbjct: 440 ENNITYPF-KESNPITIRKKIPEWKLSDSDKTIESEHPPLR--SLTIDHGEPPIQIRASP 496

Query: 262 YKV--------EANKVHQQLNFANTMLTVMSKQLGRIEVQKPEPSTSKKSSSSF----TL 309
           YK+          + + QQ NF NT L  + KQL RIE Q  + + +  S+S        
Sbjct: 497 YKIPKPNDSDSNLSSIIQQNNFCNTNLNTIGKQLTRIENQFQKSTITVSSTSPIPSKSDY 556

Query: 310 GNPLQTPIFKIPQYTK--EEFNSFNLSGSVEKLKEKLNKL-----SINHLDKDLNINKIR 362
              L+  IFK  Q +K  ++    + S   + ++E+L+++     S N +    N  +  
Sbjct: 557 DKKLKEAIFKPFQVSKTSQKLVQESKSDFAKAIREQLDRIESASSSSNKVQIAPNTPQSS 616

Query: 363 KFG----PDNNTRAYYPRPSYSDMRFEERREFVQNTFSGTSLDEWNIDGFSEQNILDITH 418
           K G     D  + A     ++ D     R   +    +  ++   +    +  N   +  
Sbjct: 617 KIGVLEQDDQTSIASSDLEAFKDEAPTPRANKIHWELAPPTVK--SPPDLAIDNRPRVLQ 674

Query: 419 QMIMAATAYKVHNNT-DRNAALMITHGFTGQLRGWWDNIMTPEDKSTILEKKKENGEEDA 477
           QM MAA AYK  + T D   A ++  GFTGQL+                           
Sbjct: 675 QMTMAANAYKTQSGTSDMAIAEILIAGFTGQLK--------------------------- 707

Query: 478 VATLIYTIILHFIGDPSIFRERASSQLSNLYCPTMSDYRWYKDTFFSKVTLREDGNNAFW 537
                        GDPS  R++ +  L NL C  +SD++ YK TFF+++ LR+D N+  W
Sbjct: 708 -------------GDPSHLRDKNAELLHNLRCRKLSDFQLYKTTFFTRLFLRDDANHTTW 754

Query: 538 KERFIAGLPRLMQSKVLDNLSLFNQGNPINFGSLSFGQLHNTIVHTGIQVCTDFKLQNKM 597
           KE+F+AGLP L+  KV +++      N I +  L++GQL + +   G+++C D KLQ ++
Sbjct: 755 KEKFLAGLPTLLGEKVRNSIKAL-YDNRIPYDELTYGQLVSFVNKEGLKICQDLKLQKRL 813

Query: 598 QKDMQISRKEVGSFCEQYGVEPLQAPSSK 626
           +++++ S++E+GSFC+Q+  +P +A +SK
Sbjct: 814 KQELRQSKRELGSFCKQFNYDPFKASTSK 842



 Score =  123 bits (308), Expect = 8e-26
 Identities = 79/189 (41%), Positives = 108/189 (56%), Gaps = 29/189 (15%)

Query: 2290 PPDILKKTTEKLSAAEGSRLIIKYKIPSAIIKNGSLEIETPFLLVRNLSQKVIIGTPFIK 2349
            P    +KT E+LSAA  S+L +  K+ ++I  NG  E +T F+L  ++   VI+GTPFI 
Sbjct: 1060 PKRFHEKTKERLSAANNSKLKVDSKVEASIHNNG-FEFKTSFILTNDIHHAVILGTPFIN 1118

Query: 2350 KLFPYDTDVNGITVQHLGQPILFKFSEPPFDKTLNVISYKEKQINFLKEEISYKNIEVQL 2409
             + P          QH+         + P++      S+ EKQI      I   N++++ 
Sbjct: 1119 LITPK---------QHM--------VDLPYEN-----SFDEKQIPTKARPIQM-NMDLER 1155

Query: 2410 QQPSVKSRIENILGNIQSSICSCKSSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCW 2469
                 K  I +++   +  I   +S WSCAAFYVNK +EIERGTPRLVINYKPLN+AL W
Sbjct: 1156 H---CKEEINDLVK--KGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKALKW 1210

Query: 2470 IRYPIPNKK 2478
            IRYPIPNKK
Sbjct: 1211 IRYPIPNKK 1219



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 47/86 (54%), Positives = 59/86 (67%), Gaps = 1/86 (1%)

Query: 2394 NFLKEEISYKNIEVQLQQPSVKSRIENILGNIQSS-ICSCKSSWSCAAFYVNKQAEIERG 2452
            +F +++I  K   +Q+     +   E I   ++   I   +S WSCAAFYVNK +EIERG
Sbjct: 2599 SFDEKQIPTKARPIQMNMDLERHCKEEINDLVKKGLIVKSRSPWSCAAFYVNKNSEIERG 2658

Query: 2453 TPRLVINYKPLNQALCWIRYPIPNKK 2478
            TPRLVINYKPLN+AL WIRYPIPNKK
Sbjct: 2659 TPRLVINYKPLNKALKWIRYPIPNKK 2684



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 54/175 (30%), Positives = 92/175 (51%), Gaps = 19/175 (10%)

Query: 2290 PPDILKKTTEKLSAAEGSRLIIKYKIPSAIIKNGSLEIETPFLLVRNLSQKVIIGTPFIK 2349
            P    +KT E+LSAA  S+L +  K+ ++I  NG  E +T F+L  ++   VI+GTPFI 
Sbjct: 2424 PKRFHEKTKERLSAANNSKLKVDSKVEASIHNNG-FEFKTSFILTNDIHHAVILGTPFIN 2482

Query: 2350 KLFPYDTDVNGITVQHLGQPILFKFSEPPFDKTLNV--------------ISYKEKQINF 2395
             + PY  + + I+ +   + I+F F E P  + LN+              I+ K+  + F
Sbjct: 2483 LITPYTVNYDSISFKVKNKKIIFPFIEKPKTRNLNIVKACSIYQNRINNLINSKQNDLTF 2542

Query: 2396 LKEEISYKNIEVQLQQPSVKSRIENILGNIQSSICSCKSSWSCAAFYVNKQAEIE 2450
            L++++S + IE  LQ+  +K +I +    I+  IC+   S    AF+  KQ  ++
Sbjct: 2543 LQKDLSLQRIENDLQRDFIKRKIFDFKTLIEKEICADLPS----AFWNRKQHMVD 2593


>UniRef100_Q8S2M4 Hypothetical protein OSJNBa0090K04.9 [Oryza sativa]
          Length = 1634

 Score =  400 bits (1027), Expect = e-109
 Identities = 334/1181 (28%), Positives = 557/1181 (46%), Gaps = 191/1181 (16%)

Query: 11   SPKQETIMLEANLKRSLVQVPKKLTHEEVMSNVPEEWVFKNSLPQPKVHNTQVRELFQEG 70
            +PK  T +L+ N   +   +PK L  +E+   +PE+WV   ++    +  ++V  L +  
Sbjct: 12   TPKGLTTLLQTN-PNNRHTIPKTLKWDEI--TLPEKWVLSQAVEPKSMDQSEVESLIET- 67

Query: 71   ANLTLRMNRSNSFSIRTPQQLYRVDLPRSSVSSKLKGIDTTSSPSIATPIYQDEESSNYS 130
                  ++     +  + Q+ +    P  S+ S+ +    T   ++    Y+D  S   S
Sbjct: 68   ------LDGDVEITFASKQKAFLQSRPSVSLDSRPR----TKPQNVVYATYEDN-SDEPS 116

Query: 131  PTPSQINML--------SRVKSSFEINKDFIRKYFMAEYNKDKRLWYFKNFSKLETENLR 182
             +   IN++        +  +  FEI+K+ +R+      N+ K   Y +   +     +R
Sbjct: 117  ISDFDINVIELDVGFVIALEEEEFEIDKELLRREIRLPKNRAKTKRYLEEVDESFRMKIR 176

Query: 183  TLYYEEMEVSETNIYFFD*FENYCIKNNLNYPFWKNV------------NPITKIDTIWK 230
             +++ EM     NI+FFD +EN  I +   +   KN+              I K+ T W+
Sbjct: 177  EVWHNEMREQRRNIFFFDWYENSQIIHFEEFFKRKNMIKKEQKSEAEDLTVIKKVSTEWE 236

Query: 231  TPDNNTITSEYPPQTGVKIAIKDGQ-----EIEASPYKVEANKVH-----QQLNFANTML 280
            T   N + S +PP   ++++   G+      I  + Y   A   H     +Q N+AN  L
Sbjct: 237  TASGNKVDSVHPPFESIQLSHNGGKACPLKSISKNTYGETAKVEHIGHLVEQQNYANISL 296

Query: 281  TVMSKQLGRIEV--------QKPE-----PSTSKKSSSSFT--LGNPLQTPIFKI----- 320
              + +Q  RIE          +PE     PS S+ SSS     +  P   P  K      
Sbjct: 297  RSLGQQTDRIETILMEGYKTGRPEVKINIPSNSQSSSSQSVSPMFVPTIDPNIKFGKQKA 356

Query: 321  --PQYTKEEFNSFNLSGSVEKLKEKLNKLSINHLDKDLNINKIRKFGP-DNNTRAYYPRP 377
              P  ++E  N   L  +  K+ + +N++S N  +K   +NKI K     + TR YYPRP
Sbjct: 357  FGPAISEELVNELALKLNNLKVNKNINEISDN--EKYDIVNKIFKPSTLTSTTRNYYPRP 414

Query: 378  SYSDMRFEERREFVQNTF-SGTSLDEWNIDGFSEQNILDITHQMIMAATAYKVHNNTDRN 436
            +Y+D++FEE  +    T+ +G  + EWN+DGF+E  I  + HQMIM A A   + N +R 
Sbjct: 415  TYADLQFEEMPQIQNMTYYNGKEIVEWNLDGFTEYQIFTLCHQMIMYANACIANGNKERE 474

Query: 437  AALMITHGFTGQLRGWWDNIMTPEDKSTIL--EKKKENGE---------------EDAVA 479
            AA MI  GF+GQL+GWW+N +    +  IL   K+ + G                 DA+A
Sbjct: 475  AANMIVIGFSGQLKGWWNNYLNETQRQEILCAVKRDDQGRPLPDRDGNGNPTGNISDALA 534

Query: 480  TLIYTIILHFIGDPSIFRERASSQLSNLYCPTMSDYRWYKDTFFSKVTLREDGNNAFWKE 539
            TLIY II HF G+     E+   QL NL C TMSD+RWYKDTF SK+    + N  FWKE
Sbjct: 535  TLIYNIIYHFAGNYHDIYEKNREQLINLKCKTMSDFRWYKDTFLSKLYTLPEPNQDFWKE 594

Query: 540  RFIAGLPRLMQSKVLDNLSLFNQGNPINFGSLSFGQLHNTIVHTGIQVCTDFKLQNKMQK 599
            ++I+GLP L   KV ++L     G  IN+  L  G++   I   G ++C D K++++++K
Sbjct: 595  KYISGLPPLFAEKVRNSLRK-EGGGSINYHYLDIGKITQKIQLVGAELCNDLKIKDQLKK 653

Query: 600  DMQISRKEVGSFCEQYGVEPLQAPSSKARRINRSK--TKPQGYK-------KRKPFQKKP 650
               + ++E+G FC Q+G    Q P    +R   SK  TKP           KRKP  K+ 
Sbjct: 654  QRILGKREMGDFCYQFG---FQDPYVYRKRKTHSKPMTKPNDKSKMSFQATKRKP--KRI 708

Query: 651  YEQNPSTQQPTNKKNVNPKKKNVCWKCGKPGHYANKC---KTQQKINELDLDQKLKD--S 705
            Y +N  TQ           K+ +C+KCG  GH AN+C   K +++I  L LD + +D   
Sbjct: 709  YNKNIRTQD-------TESKETICYKCGLKGHIANRCFKSKVKKEIQAL-LDSESEDVKE 760

Query: 706  LISVLINSEDPHYSSEYEYEGDEDQDINLVEYSSDS---HSSSEEERECVKDSSGFCDCA 762
             +  ++N+ D   SS+ E    ++ +IN  + S  S     +SEEE +            
Sbjct: 761  KLEAILNNIDNDLSSDEE----KNAEINCCQDSGCSCCEPDNSEEESD------------ 804

Query: 763  GCLGQNINMLTQDQTMSLISIIDKMEDSPLRDEFLQQLNLLVKKE-ETLKKDI-SPPINS 820
                +NI +LT  +   ++   + ++D   +   L++    VK + + LKKDI      S
Sbjct: 805  ----ENILVLTSLEEF-VLDTFETIQDPEEKRRVLEKFLSRVKTDKDKLKKDIQKSKFLS 859

Query: 821  MNEIFNRF----RPKPTITLSDLQEEVKILKEEINQLKQNDLSLEFRLIELAGIKIIESQ 876
            ++E+F R     +      L  L E+ KI+K+++ ++++    LE +     G  + E  
Sbjct: 860  IDEVFKRLDEQKKKNEQPDLISLFEDQKIMKQDLEEIRKRLYMLESK----EGFHMEEKD 915

Query: 877  ETLASASGIKQIPDKKNEDNNSQEPNENYLNLLNLVITHKWHSEITL-VINDFRINIVAL 935
            E +                    + +++ +  +   +  KW++E+    I+      + L
Sbjct: 916  EPI--------------------QEDDHVVGTIQKYMKQKWYTEVMYRFIDGSYFQHITL 955

Query: 936  IDSGADINCIQEGLIPTQFYEKTKEGVNSANGSKMNIQYKLSNAKICKNQICFKSSFVLV 995
            IDSGAD++CI+EG+IP +++ K    +  A+G  + ++Y++    IC +++C K+SF+LV
Sbjct: 956  IDSGADVSCIREGIIPHKYFYKAAHRIRGADGRLLTVEYQIPEIYICISEVCIKTSFLLV 1015

Query: 996  KNMTEKVILGTLFICLLYPKVHT------------IALPY---IDEFNEKDIPTKARPIQ 1040
            KN+ + VILGT F+ L+ P + T            ++L +    DE  ++ I TK   + 
Sbjct: 1016 KNLKQDVILGTPFLSLIRPFLVTNEDIQFKIMDKQVSLRFSSNTDEILDQLIQTKREQV- 1074

Query: 1041 MNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASE 1081
            +N  YL         YL K +    K+ W     Y+L A++
Sbjct: 1075 VNTIYLH--DNSFPSYLPKSMDLPGKTSWE--DRYLLKATK 1111



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 32/107 (29%), Positives = 54/107 (49%)

Query: 2287 GSFPPDILKKTTEKLSAAEGSRLIIKYKIPSAIIKNGSLEIETPFLLVRNLSQKVIIGTP 2346
            G  P     K   ++  A+G  L ++Y+IP   I    + I+T FLLV+NL Q VI+GTP
Sbjct: 968  GIIPHKYFYKAAHRIRGADGRLLTVEYQIPEIYICISEVCIKTSFLLVKNLKQDVILGTP 1027

Query: 2347 FIKKLFPYDTDVNGITVQHLGQPILFKFSEPPFDKTLNVISYKEKQI 2393
            F+  + P+      I  + + + +  +FS    +    +I  K +Q+
Sbjct: 1028 FLSLIRPFLVTNEDIQFKIMDKQVSLRFSSNTDEILDQLIQTKREQV 1074


>UniRef100_Q6Z3S5 Hypothetical protein OSJNBa0025J22.29 [Oryza sativa]
          Length = 1275

 Score =  384 bits (985), Expect = e-104
 Identities = 316/1159 (27%), Positives = 522/1159 (44%), Gaps = 216/1159 (18%)

Query: 11   SPKQETIMLEANLKRSLVQVPKKLTHEEVMSNVPEEWVFKNSLPQPKVHNTQVRELFQEG 70
            +PK  T +L+ N   +   +PK L  +E+   +PE+WV   ++    +  ++V  L +  
Sbjct: 161  TPKGLTTLLQTN-PNNRHTIPKTLKWDEI--TLPEKWVLSQAVEPKSMDQSEVESLIETP 217

Query: 71   ANLTLRMNRSNSFSIRTPQQLYRVDLPRSSVSSKLKGIDTTSSPSIATPIYQDEESSNYS 130
                   +     +  + Q+ +    P  S+ S+ +    T   ++    Y+D  S   S
Sbjct: 218  -------DGDVEITFASKQKAFLQSRPSVSLDSRPR----TKPQNVVYATYEDN-SDEPS 265

Query: 131  PTPSQINMLSR--------VKSSFEINKDFIRKYFMAEYNKDKRLWYFKNFSKLETENLR 182
             +   IN++           +  FEI+KD +++    + N+ K   YF+   +     +R
Sbjct: 266  ISDFDINVIELDVGFVIAIEEDEFEIDKDLLKRELRLQKNRPKMKRYFERVDEPFRLKIR 325

Query: 183  TLYYEEMEVSETNIYFFD*FENYCIKNNLNYPFWKNV------------NPITKIDTIWK 230
             L+++EM     NI+FFD +E+  +++   +   KN+              I K+ T W+
Sbjct: 326  ELWHKEMREQRKNIFFFDWYESSQVRHFEEFFKRKNMIKKEQKSEAEDLTVIKKVSTEWE 385

Query: 231  TPDNNTITSEYPPQTGVKIAIKDGQ-----EIEASPYKVEANKVH-----QQLNFANTML 280
            T   N + S +PP   V+++   G+      I  + Y   A   H     +Q N+AN  L
Sbjct: 386  TASGNKVDSVHPPFESVQLSHNGGKACPLKSISKNTYGETAKVEHIGHLVEQQNYANISL 445

Query: 281  TVMSKQLGRIEVQKPEPSTSKKSSSSFTLGNPLQTPIFKIPQYTKEEFNSFNLSGSVEKL 340
              + +Q  RIE    E          +  G P                            
Sbjct: 446  RSLGQQTNRIETILME---------GYKTGRP---------------------------- 468

Query: 341  KEKLNKLSINHLDKDLNINKIRKFGP-DNNTRAYYPRPSYSDMRFEERREFVQNT--FSG 397
                        +K   +NKI K     + TR YYPRP+Y+D++FEE  + +QN   ++G
Sbjct: 469  ------------EKYDMVNKIFKPSTLTSTTRNYYPRPTYADLQFEEMPQ-IQNMIYYNG 515

Query: 398  TSLDEWNIDGFSEQNILDITHQMIMAATAYKVHNNTDRNAALMITHGFTGQLRGWWDNIM 457
              + EWN+DGF+E  I  + HQMIM A A   + N +R AA MI  GF+GQL+GWW+N +
Sbjct: 516  KEIVEWNLDGFTEYQIFTLCHQMIMYANACIANGNKEREAANMIVIGFSGQLKGWWNNYL 575

Query: 458  TPEDKSTIL--EKKKENGE---------------EDAVATLIYTIILHFIGDPSIFRERA 500
                +  IL   K+ + G                 DA+ATLIY II HF G+     E+ 
Sbjct: 576  NETQRQEILCAVKRDDQGRPLPDRDGNGNPTGNISDALATLIYNIIYHFAGNYHDIYEKN 635

Query: 501  SSQLSNLYCPTMSDYRWYKDTFFSKVTLREDGNNAFWKERFIAGLPRLMQSKVLDNLSLF 560
              QL NL C TMSD+RWYKDTF SK+    + N  FWKE++I+GLP L   KV ++L   
Sbjct: 636  REQLINLKCKTMSDFRWYKDTFLSKLYTLPEPNQDFWKEKYISGLPPLFAEKVRNSLRK- 694

Query: 561  NQGNPINFGSLSFGQLHNTIVHTGIQVCTDFKLQNKMQKDMQISRKEVGSFCEQYGVEPL 620
              G  IN+  L  G++   I   G ++C D K++++++K   + ++E+G FC Q+G    
Sbjct: 695  EGGGSINYHYLDIGKITQKIQLVGAELCNDLKIKDQLKKQRILGKREMGDFCYQFG---F 751

Query: 621  QAPSSKARRINRSK--TKPQGYK-------KRKPFQKKPYEQNPSTQQPTNKKNVNPKKK 671
            Q P    +R   SK  TKP           KRKP  K+ Y +N  TQ           K+
Sbjct: 752  QDPYVHRKRKTHSKPMTKPNDKSKMSFQATKRKP--KRIYNKNIRTQD-------TESKE 802

Query: 672  NVCWKCGKPGHYANKCKTQQKINELDLDQKLKDSLISVLINSEDPHYSSEYEYEGDEDQD 731
             +C+KCG  GH AN+C             K+K   I  L++SE      + E        
Sbjct: 803  TICYKCGLKGHIANRC----------FKSKVKKE-IQALLDSESEDVKEKLE------AI 845

Query: 732  INLVEYSSDSHSSSEEERECVKDSSGFCDCAGCLGQNINMLTQDQTMSLISI-------I 784
            +N ++  S S      E  C +DS     C+ C   N    + +  + L S+        
Sbjct: 846  LNNIDNDSSSDEEKNAEINCCQDSG----CSCCEPDNSEEESDENILVLTSLEEFVLDTF 901

Query: 785  DKMEDSPLRDEFLQQLNLLVKKE-ETLKKDI-SPPINSMNEIFNRF----RPKPTITLSD 838
            + ++D   +   L++    VK + + LKKDI      S++E+F R     +      L  
Sbjct: 902  ETIQDPEEKRRVLEKFLSRVKTDKDKLKKDIQKSKFLSIDEVFKRLDEQKKKNEQPDLIS 961

Query: 839  LQEEVKILKEEINQLKQNDLSLEFRLIELAGIKIIESQETLASASGIKQIPDKKNEDNNS 898
            L E+ KI+K+++ ++++    LE +     G  + E  E +                   
Sbjct: 962  LFEDQKIMKQDLEEIRKRLYMLESK----EGFHMEEKDEPI------------------- 998

Query: 899  QEPNENYLNLLNLVITHKWHSEITL-VINDFRINIVALIDSGADINCIQEGLIPTQFYEK 957
             + +++ +  +   +  KW++E+    I+      + LIDSGAD+NCI+EG+IP +++ K
Sbjct: 999  -QEDDHVVGTIQKYMKQKWYTEVMYRFIDGSYFQHITLIDSGADVNCIREGIIPHKYFYK 1057

Query: 958  TKEGVNSANGSKMNIQYKLSNAKICKNQICFKSSFVLVKNMTEKVILGTLFICLLYPKVH 1017
                +  A+G  + ++Y++    IC  ++C K+SF+LVKN+ + VILGT F+ L+ P + 
Sbjct: 1058 AAHRIRGADGGLLTVEYQIPEIYICITEVCIKTSFLLVKNLKQDVILGTPFLSLIRPFLV 1117

Query: 1018 T------------IALPY---IDEFNEKDIPTKARPIQMNEQYLKYCREEIGEYLNKGLI 1062
            T            ++L +    DE  ++ + TK   + +N  YL         YL K + 
Sbjct: 1118 TNEDIQFKIMGKQVSLRFSSNTDEILDQLVQTKREQV-VNTIYLH--DNSFPSYLPKSMD 1174

Query: 1063 RHSKSPWSCIGFYVLNASE 1081
               K+ W     Y+L A++
Sbjct: 1175 LPGKTSWE--DRYLLKATK 1191



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 32/107 (29%), Positives = 55/107 (50%)

Query: 2287 GSFPPDILKKTTEKLSAAEGSRLIIKYKIPSAIIKNGSLEIETPFLLVRNLSQKVIIGTP 2346
            G  P     K   ++  A+G  L ++Y+IP   I    + I+T FLLV+NL Q VI+GTP
Sbjct: 1048 GIIPHKYFYKAAHRIRGADGGLLTVEYQIPEIYICITEVCIKTSFLLVKNLKQDVILGTP 1107

Query: 2347 FIKKLFPYDTDVNGITVQHLGQPILFKFSEPPFDKTLNVISYKEKQI 2393
            F+  + P+      I  + +G+ +  +FS    +    ++  K +Q+
Sbjct: 1108 FLSLIRPFLVTNEDIQFKIMGKQVSLRFSSNTDEILDQLVQTKREQV 1154


>UniRef100_Q7XFZ6 Hypothetical protein [Oryza sativa]
          Length = 1204

 Score =  290 bits (741), Expect = 5e-76
 Identities = 213/688 (30%), Positives = 333/688 (47%), Gaps = 137/688 (19%)

Query: 368  NNTRAYYPRPSYSDMRFEERREFVQNTF-SGTSLDEWNIDGFSEQNILDITHQMIMAATA 426
            + TR YYPRP+Y+D++FEE  +    T+ +G  + EWN+DGF+E  I  + HQMIM A A
Sbjct: 13   STTRNYYPRPTYADLQFEEMPQIQNMTYYNGKEIVEWNLDGFTEYQIFTLCHQMIMYANA 72

Query: 427  YKVHNNTDRNAALMITHGFTGQLRGWWDNIMTPEDKSTIL--EKKKENGE---------- 474
               + N +R AA MI  GF+GQL+GWW+N +    +  IL   K+ + G           
Sbjct: 73   CIANGNKEREAANMIVIGFSGQLKGWWNNYLNETQRQEILCAVKRDDQGRPLPDRDGNGN 132

Query: 475  -----EDAVATLIYTIILHFIGDPSIFRERASSQLSNLYCPTMSDYRWYKDTFFSKVTLR 529
                  DA+ATLIY II HF G+     E+   QL NL C TMSD+RWYKDTF SK+   
Sbjct: 133  PTGNISDALATLIYNIIYHFAGNYHDIYEKNREQLINLKCKTMSDFRWYKDTFLSKLYTL 192

Query: 530  EDGNNAFWKERFIAGLPRLMQSKVLDNLSLFNQGNPINFGSLSFGQLHNTIVHTGIQVCT 589
             + N  FWKE++I+GLP L   KV ++L     G  IN+  L  G++   I   G+++C 
Sbjct: 193  PEPNQDFWKEKYISGLPPLFAEKVRNSLRK-EGGGSINYHYLDIGKITQKIQLVGVELCN 251

Query: 590  DFKLQNKMQKDMQISRKEVGSFCEQYGVEPLQAPSSKARRINRSK--TKPQGYK------ 641
            D K++++++K   + ++E+G FC Q+G    Q P    +R   SK  TKP          
Sbjct: 252  DLKIKDQLKKQRILGKREMGDFCYQFG---FQDPYVYRKRKTHSKPMTKPNDKSKMSFQA 308

Query: 642  -KRKPFQKKPYEQNPSTQQPTNKKNVNPKKKNVCWKCGKPGHYANKC---KTQQKINELD 697
             KRKP  K+ Y +N  TQ           K+ +C+KCG  GH AN+C   K +++I  L 
Sbjct: 309  TKRKP--KRIYNKNIRTQD-------TESKETICYKCGLKGHIANRCFKSKVKKEIQAL- 358

Query: 698  LDQKLKD--SLISVLINSEDPHYSSEYEYEGDED--QDINLVEYSSDSHSSSEEERECVK 753
            LD + +D    +  ++N+ D   SS+ E   + +  QD     Y  D   +SEEE +   
Sbjct: 359  LDSESEDVKEKLEAILNNIDNDSSSDEEKNAEINCCQDSGCSCYEPD---NSEEESD--- 412

Query: 754  DSSGFCDCAGCLGQNINMLTQDQTMSLISIIDKMEDSPLRDEFLQQLNLLVKKE-ETLKK 812
                         +NI +LT  +   ++   + ++D   +   L++    VK + + LKK
Sbjct: 413  -------------ENILVLTSLEEF-VLDTFETIQDPEEKRRVLEKFLSRVKTDKDKLKK 458

Query: 813  DI-SPPINSMNEIFNRF----RPKPTITLSDLQEEVKILKEEINQLKQNDLSLEFRLIEL 867
            DI      S++E+F R     +      L  L E+ +I+K+++ ++++      +RL   
Sbjct: 459  DIQKSKFLSIDEVFKRLDEQKKKNEKPDLISLFEDQRIMKQDLEEIRKR----LYRLESK 514

Query: 868  AGIKIIESQETLASASGIKQIPDKKNEDNNSQEPNENYLNLLNLVITHKWHSEITL-VIN 926
             G  + E  E +                    + ++  +  +   +  KW++E+    I+
Sbjct: 515  EGFHMEEKDEPI--------------------QEDDQVVGTIQKYMKQKWYTEVMYRFID 554

Query: 927  DFRINIVALIDSGADINCIQEGLIPTQFYEKTKEGVNSANGSKMNIQYKLSNAKICKNQI 986
                  + LIDSGAD+NCI+E                                      +
Sbjct: 555  GSYFQHITLIDSGADVNCIRE--------------------------------------V 576

Query: 987  CFKSSFVLVKNMTEKVILGTLFICLLYP 1014
            C K+SF+LVKN+ + VILGT F+ L+ P
Sbjct: 577  CIKTSFLLVKNLKQDVILGTPFLSLIRP 604



 Score = 43.9 bits (102), Expect = 0.064
 Identities = 22/67 (32%), Positives = 38/67 (55%)

Query: 2327 IETPFLLVRNLSQKVIIGTPFIKKLFPYDTDVNGITVQHLGQPILFKFSEPPFDKTLNVI 2386
            I+T FLLV+NL Q VI+GTPF+  + P+      I  + +G+ +  +FS    +    ++
Sbjct: 578  IKTSFLLVKNLKQDVILGTPFLSLIRPFLVTNEDIQFKIMGKQVSLRFSSNTDEILDQLV 637

Query: 2387 SYKEKQI 2393
              K +Q+
Sbjct: 638  QSKREQV 644


>UniRef100_Q6XKE5 Polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score =  250 bits (638), Expect = 4e-64
 Identities = 133/340 (39%), Positives = 198/340 (58%), Gaps = 11/340 (3%)

Query: 981  ICKNQICFKSSFVLVKNMTEKVILGTLFICLLYPKVHTIALPYIDEFNEKDIPTKARPIQ 1040
            + KNQ+C +S    +   +  + L   F          I LP+  + NE   PTKA    
Sbjct: 1345 VIKNQLCAESHVDFLSKCSHPLWLNQDFF---------IQLPF--KRNENINPTKASHSG 1393

Query: 1041 MNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYKPLNKVL 1100
            MN ++L+   +E  E     LI  S S W+C  FYV   SE  RG LRLVINY+PLN  L
Sbjct: 1394 MNPEHLQLALKECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFL 1453

Query: 1101 KWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHYEWNVMP 1160
            +  ++P+PNK  L   L K  +FSKFD+KSG++Q+ +   +R KT F +P  H++W VMP
Sbjct: 1454 QDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMP 1513

Query: 1161 QGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIKKNGLVV 1220
             GLK APS +Q  M  IF P +   +VY+DD+L+FS+ ++ H++ L +FI ++KK G+++
Sbjct: 1514 FGLKTAPSLFQKAMIKIFQPILFSALVYIDDILLFSETLEDHIKLLNQFISLVKKFGVML 1573

Query: 1221 SAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCVNYVADF 1280
            SAKKM + + K +FLG +   G  +P        +KFPD      Q+Q+FLG VNY+ DF
Sbjct: 1574 SAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFLGIVNYIRDF 1633

Query: 1281 IPNIRIVCAPLFKRLRKNSPPWSEEMSHSVREVKKLVQSL 1320
            IP +    +PL   L+K  P W +   ++V+++K+L Q +
Sbjct: 1634 IPEVTEHISPLSDMLKKKPPAWGKCQDNAVKQLKQLAQQV 1673



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 132/670 (19%), Positives = 256/670 (37%), Gaps = 125/670 (18%)

Query: 136  INMLSRVKSSFEINKDFIRKYFMAEYNKDKR-------LWYFKNFSKLETENLRT---LY 185
            +  + RV      N+  IR       + +KR       L++F +  K E  +L+    L 
Sbjct: 562  VTKVDRVSDQSSKNQGLIRVLEQQLQDLNKRICPPGTSLFHFFDQQKSEMASLKEQIRLL 621

Query: 186  YEEMEVSETNIYFFD*FENYCIKNNLNYPFWKNVNPITKIDTIWKTPDNN-TITSEYPPQ 244
             E+ + +ET+   +    +Y   +N + P+  +  P +       TP    ++ S+YP Q
Sbjct: 622  KEQPQKNETDTPSYQ--SSYQPFHNFSSPYMPSNPPNSPFTNFANTPQPQPSLFSQYPIQ 679

Query: 245  TGVKIAIKDGQEIEASPYKVEANKVHQQLNFANTMLTVMSKQLGRIEVQ----------K 294
                           SP   +  K+  +   A        K+L + EV+          +
Sbjct: 680  P-------------KSPNTFDLAKLVWEKKDAIAEEKRAKKKLQKDEVKQKTSLPPESKR 726

Query: 295  PEPSTSKKSSSSFTLGNPLQTPIFKI--PQYTKEEFNSFNLSGSVEKLKEKLNKLSINHL 352
            P+P +S      F + +P    ++++  P    E+ +S +   + E +++  +   ++  
Sbjct: 727  PDPQSSSHLGDQFMISDPTLPKVYELNEPSVPSEDTSSQSYISTEESVEDTDSFSVVSEE 786

Query: 353  DKDLN-INKIRKFGPDNNT----RAYYPRPSYSDMRF--------------EERREFVQN 393
               L+ ++      P+NN     + +  RP+  ++                E R E    
Sbjct: 787  STQLSQLSSSSNDSPENNENTLPQTFMVRPTEPEISEVEDEVDGMTEEPIPERRPEITPP 846

Query: 394  TFSGTSLDEWNIDGFS----EQNILDITHQMIMAATAYKVHNNTDRNAALMI---THGFT 446
               GT    +++D  S     + I D    M+            +R   L++   T   +
Sbjct: 847  KMVGTGFHTFSLDDISITKWPERIQDFHTWMLTKQLV-------EREPFLILSEFTARLS 899

Query: 447  GQLRGWWDNIMTPEDKSTILEKKKENGEEDAVATLIYTIILHFIGDPSIFRERASSQLSN 506
            G LR WW+++  P+DK+  L  +            I  +  +F GD S  +E    Q+  
Sbjct: 900  GTLREWWNSV-GPDDKNRFLTSQDFTWN-------IRILYSYFCGDQSQNKEELRRQIFE 951

Query: 507  LYCPTMSDYRWYKDTFFSKVT--LREDGNNAFWKERFIAGLPRLMQSKVLDNLSLFNQGN 564
            + C  +S  R   D  F ++       G +   K+ FI+ LP ++  ++  +  +  +G 
Sbjct: 952  MKC--LSYDRKKIDRHFQRMIKLFYHIGGDISLKQAFISSLPPILSERI--SALIKERGT 1007

Query: 565  PINFGSLSFGQLHNTIVHTGIQVCTDFKLQNKMQK---DMQ--------ISRKEVGSFCE 613
             +    +  G +  T  +    +C+  K  N+M+K   D++        I + + G  C 
Sbjct: 1008 SVT--QMHVGDIRQTAFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLIIKGDKG--CS 1063

Query: 614  QYGVEPLQAPSSKARRINRSKTKP-QGYKKRKPFQKKPYEQNPSTQQPTNKKNVNPKKKN 672
             Y   P +    K  ++   K +  + Y+KR+ F +K        Q+P +          
Sbjct: 1064 GY-CNPSRRRKYKRFKLPSFKERDGRQYRKRRRFFRKSKTSKAMRQKPRS---------- 1112

Query: 673  VCWKCGKPGHYANKCKTQ----------QKINELDLDQKLKDSLISVLINSEDPHYSSEY 722
             C+ CGK GH++  C             QK   +D++  L+         SED  +S E+
Sbjct: 1113 -CFTCGKIGHFSRNCPQNKKSIKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEF 1171

Query: 723  --EYEGDEDQ 730
              EY G++ Q
Sbjct: 1172 YEEYAGEQYQ 1181



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/44 (61%), Positives = 33/44 (74%)

Query: 2434 SSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            S W+C AFYVNK++E  RG  RLVINY+PLN  L   ++PIPNK
Sbjct: 1420 SQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNK 1463


>UniRef100_Q6XKE6 Polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score =  250 bits (638), Expect = 4e-64
 Identities = 133/340 (39%), Positives = 198/340 (58%), Gaps = 11/340 (3%)

Query: 981  ICKNQICFKSSFVLVKNMTEKVILGTLFICLLYPKVHTIALPYIDEFNEKDIPTKARPIQ 1040
            + KNQ+C +S    +   +  + L   F          I LP+  + NE   PTKA    
Sbjct: 1345 VIKNQLCAESHVDFLSKCSHPLWLNQDFF---------IQLPF--KRNENINPTKASHSG 1393

Query: 1041 MNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYKPLNKVL 1100
            MN ++L+   +E  E     LI  S S W+C  FYV   SE  RG LRLVINY+PLN  L
Sbjct: 1394 MNPEHLQLALKECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFL 1453

Query: 1101 KWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHYEWNVMP 1160
            +  ++P+PNK  L   L K  +FSKFD+KSG++Q+ +   +R KT F +P  H++W VMP
Sbjct: 1454 QDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMP 1513

Query: 1161 QGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIKKNGLVV 1220
             GLK APS +Q  M  IF P +   +VY+DD+L+FS+ ++ H++ L +FI ++KK G+++
Sbjct: 1514 FGLKTAPSLFQKAMIKIFQPILFSALVYIDDILLFSETLEDHIKLLNQFISLVKKFGVML 1573

Query: 1221 SAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCVNYVADF 1280
            SAKKM + + K +FLG +   G  +P        +KFPD      Q+Q+FLG VNY+ DF
Sbjct: 1574 SAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFLGIVNYIRDF 1633

Query: 1281 IPNIRIVCAPLFKRLRKNSPPWSEEMSHSVREVKKLVQSL 1320
            IP +    +PL   L+K  P W +   ++V+++K+L Q +
Sbjct: 1634 IPEVTEHISPLSDMLKKKPPAWGKCQDNAVKQLKQLAQQV 1673



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 130/664 (19%), Positives = 246/664 (36%), Gaps = 113/664 (17%)

Query: 136  INMLSRVKSSFEINKDFIRKYFMAEYNKDKR-------LWYFKNFSKLETENLRT---LY 185
            +  + RV      N+  IR       + +KR       L++F +  K E  +L+    L 
Sbjct: 562  VTKVDRVSDQSSKNQGLIRVLEQQLQDLNKRICPPGTSLFHFFDQQKSEMASLKEQIRLL 621

Query: 186  YEEMEVSETNIYFFD*FENYCIKNNLNYPFWKNVNPITKIDTIWKTPDNN-TITSEYPPQ 244
             E+ + +ET+   +    +Y   +N + P+  +  P +       TP    ++ S+YP Q
Sbjct: 622  KEQPQKNETDTPSYQ--SSYQPFHNFSSPYMPSNPPNSPFTNFANTPQPQPSLFSQYPIQ 679

Query: 245  TGVKIAIKDGQEIEASPYKVEANKVHQQLNFANTMLTVMSKQLGRIEVQ----------K 294
                           SP   +  K+  +   A        K+L + EV+          +
Sbjct: 680  P-------------KSPNTFDLAKLVWEKKDAIAEEKRAKKKLQKDEVKQKTSLPPESKR 726

Query: 295  PEPSTSKKSSSSFTLGNPLQTPIFKI--PQYTKEEFNSFNLSGSVEKLKEKLNKLSINHL 352
            P+P +S      F + +P    ++++  P    E+ +S +   + E +++  +   ++  
Sbjct: 727  PDPQSSSHLGDQFMISDPTLPKVYELNEPSVPSEDTSSQSYISTEESVEDTDSFSVVSEE 786

Query: 353  DKDLN-INKIRKFGPDNNT----RAYYPRPSYSDMRF--------------EERREFVQN 393
               L+ ++      P+NN     + +  RP+  ++                E R E    
Sbjct: 787  STQLSQLSSSSNDSPENNENTLPQTFMVRPTEPEISEVEDEVDGMTEEPIPERRPEITPP 846

Query: 394  TFSGTSLDEWNIDGFS----EQNILDITHQMIMAATAYKVHNNTDRNAALMI---THGFT 446
               GT    +++D  S     + I D    M+            +R   L++   T   +
Sbjct: 847  KMVGTGFHTFSLDDISITKWPERIQDFHTWMLTKQLV-------EREPFLILSEFTARLS 899

Query: 447  GQLRGWWDNIMTPEDKSTILEKKKENGEEDAVATLIYTIILHFIGDPSIFRERASSQLSN 506
            G LR WW+++  P+DK+  L  +            I  +  +F GD S  +E    Q+  
Sbjct: 900  GTLREWWNSV-GPDDKNRFLTSQDFTWN-------IRILYSYFCGDQSQNKEELRRQIFE 951

Query: 507  LYCPTMSDYRWYKDTFFSKVT--LREDGNNAFWKERFIAGLPRLMQSKVLDNLSLFNQGN 564
            + C  +S  R   D  F ++       G +   K+ FI+ LP ++  ++           
Sbjct: 952  MKC--LSYDRKKIDRHFQRMIKLFYHIGGDISLKQAFISSLPPILSERI---------SA 1000

Query: 565  PINFGSLSFGQLH-NTIVHTGIQVCTDFKLQNKMQKDMQISRKEVGSFCEQY-----GVE 618
             I     S  Q+H   I  TG  V  D   + K    M+   +++   C +      G +
Sbjct: 1001 LIKERGTSGTQMHVGDIRQTGFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLIIKGDK 1060

Query: 619  PLQAPSSKARRINRSKTKPQGYKKRKPFQKKPYEQNPSTQQPTNKKNVNPKKKNVCWKCG 678
                  + +RR    + K   +K+R   Q   Y +     + +       +K   C+ CG
Sbjct: 1061 GCSGYCNPSRRRKYKRFKLPSFKERDGRQ---YRKRRRFFRKSKTSKAMRQKPRSCFTCG 1117

Query: 679  KPGHYANKCKTQ----------QKINELDLDQKLKDSLISVLINSEDPHYSSEY--EYEG 726
            K GH++  C             QK   +D++  L+         SED  +S E+  EY G
Sbjct: 1118 KIGHFSRNCPQNKKSIKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEFYEEYAG 1177

Query: 727  DEDQ 730
            ++ Q
Sbjct: 1178 EQYQ 1181



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/44 (61%), Positives = 33/44 (74%)

Query: 2434 SSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            S W+C AFYVNK++E  RG  RLVINY+PLN  L   ++PIPNK
Sbjct: 1420 SQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNK 1463


>UniRef100_Q91DM0 ORF I polyprotein [Petunia vein clearing virus]
          Length = 2179

 Score =  249 bits (635), Expect = 1e-63
 Identities = 133/340 (39%), Positives = 197/340 (57%), Gaps = 11/340 (3%)

Query: 981  ICKNQICFKSSFVLVKNMTEKVILGTLFICLLYPKVHTIALPYIDEFNEKDIPTKARPIQ 1040
            + KNQ+C  S    +   +  + L   F          I LP+  + NE   PTKA    
Sbjct: 1344 VIKNQLCADSHVDFLSKCSHPLWLNQDFF---------IQLPF--KKNENINPTKASHSG 1392

Query: 1041 MNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYKPLNKVL 1100
            MN ++L+   +E  E     LI  S S W+C  FYV   SE  RG LRLVINY+PLN  L
Sbjct: 1393 MNPEHLQLAIKECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFL 1452

Query: 1101 KWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHYEWNVMP 1160
            +  ++P+PNK  L   L K  +FSKFD+KSG++Q+ +   +R KT F +P  H++W VMP
Sbjct: 1453 QDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMP 1512

Query: 1161 QGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIKKNGLVV 1220
             GLK APS +Q  M  IF P +   +VY+DD+L+FS+ ++ H++ L +FI ++KK G+++
Sbjct: 1513 FGLKTAPSLFQKAMIKIFQPILFSALVYIDDILLFSETLEDHIKLLNQFISLVKKFGVML 1572

Query: 1221 SAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCVNYVADF 1280
            SAKKM + + K +FLG +   G  +P        +KFPD      Q+Q+FLG VNY+ DF
Sbjct: 1573 SAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFLGIVNYIRDF 1632

Query: 1281 IPNIRIVCAPLFKRLRKNSPPWSEEMSHSVREVKKLVQSL 1320
            IP +    +PL   L+K  P W +   ++V+++K+L Q +
Sbjct: 1633 IPEVTEHISPLSDMLKKKPPAWGKCQDNAVKQLKQLAQQV 1672



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 94/483 (19%), Positives = 186/483 (38%), Gaps = 67/483 (13%)

Query: 291  EVQKPEPSTSKKSSSSFTLGNPLQTPIFKI--PQYTKEEFNSFNLSGSVEKLKEKLNKLS 348
            E ++P+P +S      F + +P    ++ +  P    E+ +S +   + E +++  +   
Sbjct: 722  ESKRPDPQSSSHLGDQFMISDPALPKVYALNEPSVPSEDTSSQSYISTEESVEDTDSFSV 781

Query: 349  INHLDKDLN-INKIRKFGPDNNT----RAYYPRPSYSDMRF--------------EERRE 389
            ++     L+ ++      P+NN     + +  RP+  ++                E R E
Sbjct: 782  VSEESTQLSQLSSSSNDSPENNENTLPQTFMVRPTEPEISEVEDEVDGMTEEPIPERRPE 841

Query: 390  FVQNTFSGTSLDEWNIDGFS----EQNILDITHQMIMAATAYKVHNNTDRNAALMI---T 442
                   GT    +++D  S     + I D    M+            +R   L++   T
Sbjct: 842  ITPPKMVGTGFHTFSLDDISITKWPERIQDFHTWMLTKQLV-------EREPFLILSEFT 894

Query: 443  HGFTGQLRGWWDNIMTPEDKSTILEKKKENGEEDAVATLIYTIILHFIGDPSIFRERASS 502
               +G LR WW+++  P+DK+  L  +            I  +  +F GD S  +E    
Sbjct: 895  ARLSGTLREWWNSV-GPDDKNRFLTSQDFTWN-------IRILYSYFCGDQSQNKEELRR 946

Query: 503  QLSNLYCPTMSDYRWYKDTFFSKVT--LREDGNNAFWKERFIAGLPRLMQSKVLDNLSLF 560
            Q+  + C  +S  R   D  F ++       G +   K+ FI+ LP ++  ++  +  + 
Sbjct: 947  QIFEMKC--LSYDRKKIDRHFQRMIKLFYHIGGDISLKQAFISSLPPILSERI--SALIK 1002

Query: 561  NQGNPINFGSLSFGQLHNTIVHTGIQVCTDFKLQNKMQK-DMQISRKEVGSFCEQYGVEP 619
             +G  +    +  G +  T  +    +C+  K  N+M+K    + +    S     G + 
Sbjct: 1003 ERGTSVT--QMHVGDIRQTAFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLIIKGDKG 1060

Query: 620  LQAPSSKARRINRSKTKPQGYKKRKPFQKKPYEQNPSTQQPTNKKNVNPKKKNVCWKCGK 679
                 + +RR    + K   +K+R   Q   Y +     + +       +K   C+ CGK
Sbjct: 1061 CSGYCNPSRRRKYKRFKLPSFKERDGRQ---YRKRRRFFRRSKTSKAMRQKPRSCFTCGK 1117

Query: 680  PGHYANKCKTQ----------QKINELDLDQKLKDSLISVLINSEDPHYSSEY--EYEGD 727
             GH++  C             QK   +D++  L+         SED  +S E+  EY G+
Sbjct: 1118 IGHFSRNCPQNKKSIKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEFYEEYAGE 1177

Query: 728  EDQ 730
            + Q
Sbjct: 1178 QYQ 1180



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/44 (61%), Positives = 33/44 (74%)

Query: 2434 SSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            S W+C AFYVNK++E  RG  RLVINY+PLN  L   ++PIPNK
Sbjct: 1419 SQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNK 1462


>UniRef100_Q83169 Reverse transcriptase [Cauliflower mosaic virus]
          Length = 680

 Score =  223 bits (568), Expect = 6e-56
 Identities = 116/288 (40%), Positives = 176/288 (60%), Gaps = 1/288 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K +P++ +    +   ++I E L+  +I+ SKSP     F V N +E  RG  R+V+NYK
Sbjct: 249  KVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYK 308

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             +NK      Y LPNK +L+  +    IFS FD KSG++Q+ + +E R  TAF  P GHY
Sbjct: 309  AMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHY 368

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EWNV+P GLK APS +Q  M++ F  +  F  VY+DD+LVFS   + H+ H+   ++   
Sbjct: 369  EWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCN 428

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            ++G+++S KK ++F+ K  FLG EI +G   P    LE   KFPD L++K QLQRFLG +
Sbjct: 429  QHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGIL 488

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSP-PWSEEMSHSVREVKKLVQSLP 1321
             Y +D+IP +  +  PL  +L++N P  W++E +  +++VKK +Q  P
Sbjct: 489  TYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFP 536



 Score = 43.5 bits (101), Expect = 0.083
 Identities = 21/45 (46%), Positives = 27/45 (59%)

Query: 2433 KSSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            KS     AF VN +AE  RG  R+V+NYK +N+A     Y +PNK
Sbjct: 280  KSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNK 324


>UniRef100_Q7XRB3 OSJNBa0006B20.7 protein [Oryza sativa]
          Length = 685

 Score =  223 bits (568), Expect = 6e-56
 Identities = 123/295 (41%), Positives = 178/295 (59%), Gaps = 2/295 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K  PI+   + ++  +  I E L  G IR S+SP     F V N +E  RG  R+VINYK
Sbjct: 182  KTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYK 241

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             LN       Y +PNK + I R+     FSKFD+K+G++Q+ + EE    TAF  P GHY
Sbjct: 242  RLNNNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHY 301

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EW VMP GLKNAP+ +Q  M +IF     F +VY+DD+LVFS+   +H+ HLE FI  ++
Sbjct: 302  EWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEHIAHLEIFIRKVE 361

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            +NGL++S KKM+I + K  FLG+EI +G+I   +   +   +FPD + +K +LQ+FLG V
Sbjct: 362  QNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLV 421

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSPPW-SEEMSHSVREVKKLVQSL-PIVTPFQ 1327
            NY  + I N+  +  PL+ +LRKN   + + E    VR +K+ V+ L P+  P +
Sbjct: 422  NYARNHINNLAKLAGPLYAKLRKNGQRYFNSEDIKLVRLIKERVKELKPLELPLE 476



 Score = 43.1 bits (100), Expect = 0.11
 Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 9/94 (9%)

Query: 2390 EKQINFLKEEISYKNIEVQLQQPSV---KSRIENIL--GNIQSSICSCKSSWSCAAFYVN 2444
            E +IN +  E   K   ++     +   K  IE +L  G I+ S    +S    AAF V 
Sbjct: 169  ECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRES----RSPHRSAAFIVR 224

Query: 2445 KQAEIERGTPRLVINYKPLNQALCWIRYPIPNKK 2478
              AE  RG  R+VINYK LN       Y IPNK+
Sbjct: 225  NHAEEVRGKSRMVINYKRLNNNTIEDAYNIPNKQ 258


>UniRef100_Q7XEP7 Putative rice tungro bacilliform virus; reverse transcriptase [Oryza
            sativa]
          Length = 2877

 Score =  223 bits (567), Expect = 8e-56
 Identities = 122/295 (41%), Positives = 176/295 (59%), Gaps = 2/295 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K  PI+   + ++  +  I E L  G IR S+SP     F V N +E  RG  R+VINYK
Sbjct: 2295 KTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYK 2354

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             LN       Y +PNK + I R+     FSKFD+K+G++Q+ + EE    TAF  P GHY
Sbjct: 2355 RLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHY 2414

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EW VMP GLKNAP+ +Q  M +IF     F +VY+DD+L+FSK    H+ HLE F   ++
Sbjct: 2415 EWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKDHIAHLELFFRKVE 2474

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            +NGL++S KKM+I + K  FLG+EI +G+I   +   +   +FPD + +K +LQ+FLG V
Sbjct: 2475 QNGLILSKKKMEICKEKVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLV 2534

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSPPW-SEEMSHSVREVKKLVQSL-PIVTPFQ 1327
            NY  + I N+  +  PL+ +LRKN   + + E    VR +K+ V+ L P+  P +
Sbjct: 2535 NYARNHINNLAKLAGPLYTKLRKNGQKYFNSEDIKLVRLIKEKVKELKPLELPLE 2589



 Score = 43.1 bits (100), Expect = 0.11
 Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 9/94 (9%)

Query: 2390 EKQINFLKEEISYKNIEVQLQQPSV---KSRIENIL--GNIQSSICSCKSSWSCAAFYVN 2444
            E +IN +  E   K   ++     +   K  IE +L  G I+ S    +S    AAF V 
Sbjct: 2282 ECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRES----RSPHRSAAFIVR 2337

Query: 2445 KQAEIERGTPRLVINYKPLNQALCWIRYPIPNKK 2478
              AE  RG  R+VINYK LN       Y IPNK+
Sbjct: 2338 NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQ 2371


>UniRef100_P03554 Enzymatic polyprotein [Contains: Aspartic protease (EC 3.4.23.-);
            Endonuclease; Reverse transcriptase (EC 2.7.7.49)]
            [Cauliflower mosaic virus]
          Length = 679

 Score =  223 bits (567), Expect = 8e-56
 Identities = 116/288 (40%), Positives = 176/288 (60%), Gaps = 1/288 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K +P++ +    +   ++I E L+  +I+ SKSP     F V N +E  RG  R+V+NYK
Sbjct: 248  KVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYK 307

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             +NK      Y LPNK +L+  +    IFS FD KSG++Q+ + +E R  TAF  P GHY
Sbjct: 308  AMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHY 367

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EWNV+P GLK APS +Q  M++ F  +  F  VY+DD+LVFS   + H+ H+   ++   
Sbjct: 368  EWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCN 427

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            ++G+++S KK ++F+ K  FLG EI +G   P    LE   KFPD L++K QLQRFLG +
Sbjct: 428  QHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGIL 487

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSP-PWSEEMSHSVREVKKLVQSLP 1321
             Y +D+IP +  +  PL  +L++N P  W++E +  +++VKK +Q  P
Sbjct: 488  TYASDYIPKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFP 535



 Score = 43.5 bits (101), Expect = 0.083
 Identities = 21/45 (46%), Positives = 27/45 (59%)

Query: 2433 KSSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            KS     AF VN +AE  RG  R+V+NYK +N+A     Y +PNK
Sbjct: 279  KSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNK 323


>UniRef100_Q02964 Enzymatic polyprotein [Contains: Aspartic protease (EC 3.4.23.-);
            Endonuclease; Reverse transcriptase (EC 2.7.7.49)]
            [Cauliflower mosaic virus]
          Length = 679

 Score =  223 bits (567), Expect = 8e-56
 Identities = 116/288 (40%), Positives = 176/288 (60%), Gaps = 1/288 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K +P++ +    +   ++I E L+  +I+ SKSP     F V N +E  RG  R+V+NYK
Sbjct: 248  KVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYK 307

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             +NK      Y LPNK +L+  +    IFS FD KSG++Q+ + +E R  TAF  P GHY
Sbjct: 308  AMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHY 367

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EWNV+P GLK APS +Q  M++ F  +  F  VY+DD+LVFS   + H+ H+   ++   
Sbjct: 368  EWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCN 427

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            ++G+++S KK ++F+ K  FLG EI +G   P    LE   KFPD L++K QLQRFLG +
Sbjct: 428  QHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGIL 487

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSP-PWSEEMSHSVREVKKLVQSLP 1321
             Y +D+IP +  +  PL  +L++N P  W++E +  +++VKK +Q  P
Sbjct: 488  TYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFP 535



 Score = 43.5 bits (101), Expect = 0.083
 Identities = 21/45 (46%), Positives = 27/45 (59%)

Query: 2433 KSSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            KS     AF VN +AE  RG  R+V+NYK +N+A     Y +PNK
Sbjct: 279  KSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNK 323


>UniRef100_P03555 Enzymatic polyprotein [Contains: Aspartic protease (EC 3.4.23.-);
            Endonuclease; Reverse transcriptase (EC 2.7.7.49)]
            [Cauliflower mosaic virus]
          Length = 679

 Score =  223 bits (567), Expect = 8e-56
 Identities = 116/288 (40%), Positives = 176/288 (60%), Gaps = 1/288 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K +P++ +    +   ++I E L+  +I+ SKSP     F V N +E  RG  R+V+NYK
Sbjct: 248  KVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYK 307

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             +NK      Y LPNK +L+  +    IFS FD KSG++Q+ + +E R  TAF  P GHY
Sbjct: 308  AMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHY 367

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EWNV+P GLK APS +Q  M++ F  +  F  VY+DD+LVFS   + H+ H+   ++   
Sbjct: 368  EWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCN 427

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            ++G+++S KK ++F+ K  FLG EI +G   P    LE   KFPD L++K QLQRFLG +
Sbjct: 428  QHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGIL 487

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSP-PWSEEMSHSVREVKKLVQSLP 1321
             Y +D+IP +  +  PL  +L++N P  W++E +  +++VKK +Q  P
Sbjct: 488  TYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFP 535



 Score = 43.5 bits (101), Expect = 0.083
 Identities = 21/45 (46%), Positives = 27/45 (59%)

Query: 2433 KSSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            KS     AF VN +AE  RG  R+V+NYK +N+A     Y +PNK
Sbjct: 279  KSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNK 323


>UniRef100_Q66162 ORF V [Cauliflower mosaic virus]
          Length = 680

 Score =  222 bits (566), Expect = 1e-55
 Identities = 116/288 (40%), Positives = 176/288 (60%), Gaps = 1/288 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K +P++ +    +   ++I E L+  +I+ SKSP     F V N +E  RG  R+V+NYK
Sbjct: 249  KVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYK 308

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             +NK      Y LPNK +L+  +    IFS FD KSG++Q+ + +E R  TAF  P GHY
Sbjct: 309  AMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHY 368

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EWNV+P GLK APS +Q  M++ F  +  F  VY+DD+LVFS   + H+ H+   ++   
Sbjct: 369  EWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCN 428

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            ++G+++S KK ++F+ K  FLG EI +G   P    LE   KFPD L++K QLQRFLG +
Sbjct: 429  QHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGIL 488

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSP-PWSEEMSHSVREVKKLVQSLP 1321
             Y +D+IP +  +  PL  +L++N P  W++E +  +++VKK +Q  P
Sbjct: 489  TYASDYIPKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFP 536



 Score = 43.5 bits (101), Expect = 0.083
 Identities = 21/45 (46%), Positives = 27/45 (59%)

Query: 2433 KSSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            KS     AF VN +AE  RG  R+V+NYK +N+A     Y +PNK
Sbjct: 280  KSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNK 324


>UniRef100_Q00962 Enzymatic polyprotein [Contains: Aspartic protease (EC 3.4.23.-);
            Endonuclease; Reverse transcriptase (EC 2.7.7.49)]
            [Cauliflower mosaic virus]
          Length = 680

 Score =  222 bits (565), Expect = 1e-55
 Identities = 116/288 (40%), Positives = 177/288 (61%), Gaps = 1/288 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K +P++ +    +   ++I E L+  +I+ SKSP     F V N +E  RG  R+V+NYK
Sbjct: 249  KVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAENGRGNKRMVVNYK 308

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             +NK      Y LPNK +L+  +    IFS FD KSG++Q+ + +E R  TAF  P GHY
Sbjct: 309  AMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHY 368

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EWNV+P GLK APS +Q  M++ F  +  F  VY+DD++VFS   + H+ H+   ++   
Sbjct: 369  EWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDIVVFSNNEEDHLLHVAMILQKCN 428

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            ++G+++S KK ++F+ K  FLG EI +G   P    LE   KFPD L++K QLQRFLG +
Sbjct: 429  QHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGIL 488

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSP-PWSEEMSHSVREVKKLVQSLP 1321
             Y +D+IPN+  +  PL  +L++N P  W++E +  +++VKK +Q  P
Sbjct: 489  TYASDYIPNLAQMRQPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFP 536



 Score = 43.1 bits (100), Expect = 0.11
 Identities = 21/45 (46%), Positives = 27/45 (59%)

Query: 2433 KSSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            KS     AF VN +AE  RG  R+V+NYK +N+A     Y +PNK
Sbjct: 280  KSPHMAPAFLVNNEAENGRGNKRMVVNYKAMNKATVGDAYNLPNK 324


>UniRef100_Q9WI36 Reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  221 bits (563), Expect = 2e-55
 Identities = 116/288 (40%), Positives = 175/288 (60%), Gaps = 1/288 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K +P++ +    +   ++I E L+  +I+ SKSP     F V N +E  RG  R+V+NYK
Sbjct: 243  KVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYK 302

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             +NK      Y LPNK +L+  +    IFS FD KSG++Q+   +E R  TAF  P GHY
Sbjct: 303  AMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLPDQESRPLTAFTCPQGHY 362

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EWNV+P GLK APS +Q  M++ F  +  F  VY+DD+LVFS   + H+ H+   ++   
Sbjct: 363  EWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNTEEDHLLHVAMILQKCN 422

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            ++G+++S KK ++F+ K  FLG EI +G   P    LE   KFPD L++K QLQRFLG +
Sbjct: 423  QHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGIL 482

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSP-PWSEEMSHSVREVKKLVQSLP 1321
             Y +D+IP +  +  PL  +L++N P  W++E +  +++VKK +Q  P
Sbjct: 483  TYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFP 530



 Score = 43.5 bits (101), Expect = 0.083
 Identities = 21/45 (46%), Positives = 27/45 (59%)

Query: 2433 KSSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            KS     AF VN +AE  RG  R+V+NYK +N+A     Y +PNK
Sbjct: 274  KSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNK 318


>UniRef100_P03556 Enzymatic polyprotein [Contains: Aspartic protease (EC 3.4.23.-);
            Endonuclease; Reverse transcriptase (EC 2.7.7.49)]
            [Cauliflower mosaic virus]
          Length = 674

 Score =  220 bits (561), Expect = 4e-55
 Identities = 115/288 (39%), Positives = 175/288 (59%), Gaps = 1/288 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K +P++ +    +   ++I E L+  +I+ SKSP     F V N +E  RG  R+V+NYK
Sbjct: 243  KVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYK 302

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             +NK      Y  PNK +L+  +    IFS FD KSG++Q+ + +E R  TAF  P GHY
Sbjct: 303  AMNKATVGDAYNPPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHY 362

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EWNV+P GLK APS +Q  M++ F  +  F  VY+DD+LVFS   + H+ H+   ++   
Sbjct: 363  EWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCN 422

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            ++G+++S KK ++F+ K  FLG EI +G   P    LE   KFPD L++K QLQRFLG +
Sbjct: 423  QHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGIL 482

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSP-PWSEEMSHSVREVKKLVQSLP 1321
             Y +D+IP +  +  PL  +L++N P  W++E +  +++VKK +Q  P
Sbjct: 483  TYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFP 530



 Score = 41.6 bits (96), Expect = 0.32
 Identities = 21/45 (46%), Positives = 26/45 (57%)

Query: 2433 KSSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRYPIPNK 2477
            KS     AF VN +AE  RG  R+V+NYK +N+A     Y  PNK
Sbjct: 274  KSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNPPNK 318


>UniRef100_Q7XQK4 OSJNBa0017B10.4 protein [Oryza sativa]
          Length = 429

 Score =  219 bits (558), Expect = 8e-55
 Identities = 119/290 (41%), Positives = 175/290 (60%), Gaps = 1/290 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K  PI+   + ++  +  I E L  G IR S+SP     F V N +E  RG  R+VINYK
Sbjct: 71   KTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYK 130

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             LN       Y +PNK + I R+     FSKFD+K+G++Q+ + EE    TAF  P GHY
Sbjct: 131  RLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHY 190

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EW VMP GLKNAP+ +Q  + +IF     F +VY+DD+LVFS+   +H+ HLE F   ++
Sbjct: 191  EWLVMPLGLKNAPAIFQRKIQNIFNENQEFILVYIDDLLVFSRTYKEHIAHLEIFFRKVE 250

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            +NGL++S KKM+I + K  FLG+EI +G+I   +   +   +FPD + +K +LQ+FLG V
Sbjct: 251  QNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLV 310

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSPPW-SEEMSHSVREVKKLVQSLPIV 1323
            NY  + I N+  +  PL+ +LRKN   + + E    VR +K+ V+ L ++
Sbjct: 311  NYARNHINNLAKLAGPLYAKLRKNGQRYFNSEDIKLVRLIKERVKELKLL 360



 Score = 43.1 bits (100), Expect = 0.11
 Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 9/94 (9%)

Query: 2390 EKQINFLKEEISYKNIEVQLQQPSV---KSRIENIL--GNIQSSICSCKSSWSCAAFYVN 2444
            E +IN +  E   K   ++     +   K  IE +L  G I+ S    +S    AAF V 
Sbjct: 58   ECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRES----RSPHRSAAFIVR 113

Query: 2445 KQAEIERGTPRLVINYKPLNQALCWIRYPIPNKK 2478
              AE  RG  R+VINYK LN       Y IPNK+
Sbjct: 114  NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQ 147


>UniRef100_Q688G8 Putative polyprotein [Oryza sativa]
          Length = 1326

 Score =  216 bits (551), Expect = 5e-54
 Identities = 117/295 (39%), Positives = 175/295 (58%), Gaps = 2/295 (0%)

Query: 1035 KARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALRLVINYK 1094
            K  PI+   + ++  +  I E L  G IR S+SP     F V N +E  RG  R+V NYK
Sbjct: 862  KTSPIEATPKDIEQFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVKNYK 921

Query: 1095 PLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFVVPFGHY 1154
             LN       Y +PNK + I R+     FSKFD+K+G++Q+ + EE    TAF  P GHY
Sbjct: 922  RLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKTGFWQVKMAEESIEWTAFTCPQGHY 981

Query: 1155 EWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEKFIEIIK 1214
            EW VMP GLKNAP+ +Q  M +IF     F +VY++D+LVFS+   +H+ HLE F   ++
Sbjct: 982  EWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYINDLLVFSRTYKEHIAHLEIFFRKVE 1041

Query: 1215 KNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQRFLGCV 1274
            +NGL++S KKM+I + K  FLG+EI +G+I   +   +   +FPD + +K QLQ+FLG V
Sbjct: 1042 QNGLILSKKKMEICKEKINFLGHEIREGKIHLQEHIAKKILQFPDAINDKKQLQQFLGLV 1101

Query: 1275 NYVADFIPNIRIVCAPLFKRLRKNSPPW--SEEMSHSVREVKKLVQSLPIVTPFQ 1327
            NY  + I N+  +  PL+ +LRKN   +  SE++   +   +++ +  P+  P +
Sbjct: 1102 NYARNHINNLAKLAGPLYAKLRKNGQRYFNSEDIKLVILIKERVKELKPLELPLE 1156



 Score = 40.4 bits (93), Expect = 0.70
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 9/94 (9%)

Query: 2390 EKQINFLKEEISYKNIEVQLQQPSV---KSRIENIL--GNIQSSICSCKSSWSCAAFYVN 2444
            E +IN +  E   K   ++     +   K  IE +L  G I+ S    +S    AAF V 
Sbjct: 849  ECKINIINPEYIIKTSPIEATPKDIEQFKMHIEELLKLGAIRES----RSPHRSAAFIVR 904

Query: 2445 KQAEIERGTPRLVINYKPLNQALCWIRYPIPNKK 2478
              AE  RG  R+V NYK LN       Y IPNK+
Sbjct: 905  NHAEEVRGKSRMVKNYKRLNDNTIEDAYNIPNKQ 938


>UniRef100_Q7XFN9 Putative retroelement [Oryza sativa]
          Length = 1183

 Score =  211 bits (537), Expect = 2e-52
 Identities = 111/270 (41%), Positives = 164/270 (60%)

Query: 1029 EKDIPTKARPIQMNEQYLKYCREEIGEYLNKGLIRHSKSPWSCIGFYVLNASELERGALR 1088
            + ++P  ++P + N + ++  +  I E L  G IR S+SP     F V N  E  RG  R
Sbjct: 701  QNNVPYISKPNRSNFEDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHVEEVRGKSR 760

Query: 1089 LVINYKPLNKVLKWIRYPLPNKTDLIKRLHKGTIFSKFDMKSGYYQISVREEDRYKTAFV 1148
            ++INYK LN       Y +PNK + I R+     FSKFD+K+G++Q+ + EE    TAF 
Sbjct: 761  MIINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFT 820

Query: 1149 VPFGHYEWNVMPQGLKNAPSEYQNIMNDIFYPYMNFTIVYLDDVLVFSKGIDQHVQHLEK 1208
             P GHYEW VMP GLKNAP+ +Q  M +IF     F +VY+DD+LVFS+   +H+ HLE 
Sbjct: 821  CPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEHIAHLEI 880

Query: 1209 FIEIIKKNGLVVSAKKMKIFETKTRFLGYEIYQGQITPIQRSLEFAKKFPDELKEKTQLQ 1268
            F   +++N L++S KKM+I + K  FLG+EI +G+I   +   +   +FPD + +K +LQ
Sbjct: 881  FFRKVEQNRLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQ 940

Query: 1269 RFLGCVNYVADFIPNIRIVCAPLFKRLRKN 1298
            +FLG VNY  + I N+  +  PL+ +L KN
Sbjct: 941  QFLGLVNYARNHINNLAKLAGPLYAKLIKN 970



 Score = 38.5 bits (88), Expect = 2.7
 Identities = 27/66 (40%), Positives = 33/66 (49%), Gaps = 6/66 (9%)

Query: 2415 KSRIENIL--GNIQSSICSCKSSWSCAAFYVNKQAEIERGTPRLVINYKPLNQALCWIRY 2472
            K  IE +L  G I+ S    +S    AAF V    E  RG  R++INYK LN       Y
Sbjct: 722  KMHIEELLKLGAIRES----RSPHRSAAFIVRNHVEEVRGKSRMIINYKRLNDNTIEDAY 777

Query: 2473 PIPNKK 2478
             IPNK+
Sbjct: 778  NIPNKQ 783


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.323    0.138    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,057,428,377
Number of Sequences: 2790947
Number of extensions: 178355803
Number of successful extensions: 594091
Number of sequences better than 10.0: 28772
Number of HSP's better than 10.0 without gapping: 1948
Number of HSP's successfully gapped in prelim test: 26837
Number of HSP's that attempted gapping in prelim test: 569064
Number of HSP's gapped (non-prelim): 37220
length of query: 2478
length of database: 848,049,833
effective HSP length: 144
effective length of query: 2334
effective length of database: 446,153,465
effective search space: 1041322187310
effective search space used: 1041322187310
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 84 (37.0 bits)


Lotus: description of TM0283.1