Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0266.9
         (111 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8RY00 Hypothetical protein At3g48820 [Arabidopsis tha...   149  1e-35
UniRef100_Q6ZH45 Sialyltransferase-like protein [Oryza sativa]        124  4e-28
UniRef100_Q9M301 Hypothetical protein T21J18_90 [Arabidopsis tha...    98  4e-20
UniRef100_Q8VZJ0 At1g08660/F22O13_14 [Arabidopsis thaliana]            60  1e-08
UniRef100_Q6C6V1 Similar to sp|P22515 Saccharomyces cerevisiae Y...    36  0.24
UniRef100_UPI0000277B98 UPI0000277B98 UniRef100 entry                  35  0.54
UniRef100_Q9FRR9 F22O13.14 [Arabidopsis thaliana]                      34  0.92
UniRef100_UPI00003266EE UPI00003266EE UniRef100 entry                  33  1.2
UniRef100_Q9CDK6 Transcription regulator [Lactococcus lactis]          33  1.2
UniRef100_UPI000042EBCA UPI000042EBCA UniRef100 entry                  32  3.5
UniRef100_UPI000029FB90 UPI000029FB90 UniRef100 entry                  32  4.5
UniRef100_UPI000026F710 UPI000026F710 UniRef100 entry                  32  4.5

>UniRef100_Q8RY00 Hypothetical protein At3g48820 [Arabidopsis thaliana]
          Length = 440

 Score =  149 bits (376), Expect = 1e-35
 Identities = 71/111 (63%), Positives = 90/111 (80%), Gaps = 2/111 (1%)

Query: 1   MRVLQLGLLLALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANG 60
           M++L L  LLAL +G +A+ IYIIG+S+  +Y +   T+ED +AL SL N FQKCVSANG
Sbjct: 1   MKLLHLIFLLALTTGISAVLIYIIGVSN--LYESNRFTNEDLEALQSLQNGFQKCVSANG 58

Query: 61  LGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWE 111
           LGL+AAM  DYC+ +INFP DT+PKWKDPK+GELE LS++F+LCEAVATWE
Sbjct: 59  LGLQAAMGRDYCKVSINFPKDTVPKWKDPKSGELEGLSYEFDLCEAVATWE 109


>UniRef100_Q6ZH45 Sialyltransferase-like protein [Oryza sativa]
          Length = 439

 Score =  124 bits (312), Expect = 4e-28
 Identities = 64/111 (57%), Positives = 75/111 (66%), Gaps = 3/111 (2%)

Query: 1   MRVLQLGLLLALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANG 60
           MRVL L L  A+ SG  AI +Y+ GLS    Y    ++D D  AL +L + F KCV ANG
Sbjct: 1   MRVLPLALAAAIFSGVTAILVYLSGLSS---YGGARVSDADLAALGALQSGFSKCVDANG 57

Query: 61  LGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWE 111
           LGLKA    DYC+  I +PSDT  KWKDPKTGE E LSF+FNLCEAVA+WE
Sbjct: 58  LGLKAIPGEDYCRVVIQYPSDTDSKWKDPKTGEPEGLSFEFNLCEAVASWE 108


>UniRef100_Q9M301 Hypothetical protein T21J18_90 [Arabidopsis thaliana]
          Length = 470

 Score = 98.2 bits (243), Expect = 4e-20
 Identities = 53/104 (50%), Positives = 63/104 (59%), Gaps = 30/104 (28%)

Query: 38  TDEDTQALLSLHNTFQKC----VSANGLGLKAAMSSDYCQTTINFPSDTIPKW------- 86
           T+ED +AL SL N FQK      SANGLGL+AAM  DYC+ +INFP DT+PKW       
Sbjct: 19  TNEDLEALQSLQNGFQKTDLMMQSANGLGLQAAMGRDYCKVSINFPKDTVPKWLVIILVL 78

Query: 87  -------------------KDPKTGELEALSFDFNLCEAVATWE 111
                              KDPK+GELE LS++F+LCEAVATWE
Sbjct: 79  VSSKYGLPYYYVLDYVQQQKDPKSGELEGLSYEFDLCEAVATWE 122


>UniRef100_Q8VZJ0 At1g08660/F22O13_14 [Arabidopsis thaliana]
          Length = 474

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 4/106 (3%)

Query: 9   LLALASGFAAISIYIIGLSDPSVYPTYHLTD---EDTQALLSLHNTFQKCVSANGLGLKA 65
           LL L    A  S+++  +            D   ED Q L    ++ Q+CV+  GLGL A
Sbjct: 12  LLQLLGCVAVFSVFVFTIQSSFFADNNRKLDLQPEDIQILSDFQSSVQQCVANRGLGLSA 71

Query: 66  AMSSDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWE 111
            +  D+C   + FP  T   W + +    EAL F +N+CEAV  WE
Sbjct: 72  HII-DHCNLILKFPEGTNSTWYNAQFKVFEALEFKYNVCEAVLLWE 116


>UniRef100_Q6C6V1 Similar to sp|P22515 Saccharomyces cerevisiae YKL210w UBA1 E1- like
           [Yarrowia lipolytica]
          Length = 1015

 Score = 35.8 bits (81), Expect = 0.24
 Identities = 21/57 (36%), Positives = 26/57 (44%), Gaps = 6/57 (10%)

Query: 51  TFQKCVSANGLGLKAAMSSDYCQTTINFPSDT-----IPKWKDPKTGELEALSFDFN 102
           TF++CV    L  +   + D  Q   NFP D       P W  PK    +AL FDFN
Sbjct: 664 TFKECVQWARLEFEKKFNGDISQLLYNFPKDATTSTGAPFWSGPKRAP-DALEFDFN 719


>UniRef100_UPI0000277B98 UPI0000277B98 UniRef100 entry
          Length = 156

 Score = 34.7 bits (78), Expect = 0.54
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 11/80 (13%)

Query: 17  AAISIYIIGLSDPSVYPTYHLTDEDTQALLS---LHNTFQKCVSANGLGLKAAMSSDYCQ 73
           ++I I +IG+        ++L   D  +LLS   L N+ ++ +  + LG+++A+ S+Y +
Sbjct: 74  SSICINLIGILYEKKQNQFNLIHSDLPSLLSKLALQNSLEQFIHLSALGIESAVDSNYAK 133

Query: 74  TTI--------NFPSDTIPK 85
           + +        NFP+ TI K
Sbjct: 134 SKLSGEEKVRKNFPNSTILK 153


>UniRef100_Q9FRR9 F22O13.14 [Arabidopsis thaliana]
          Length = 444

 Score = 33.9 bits (76), Expect = 0.92
 Identities = 22/71 (30%), Positives = 29/71 (39%), Gaps = 20/71 (28%)

Query: 60  GLGLKAAMSSDYCQTTINFPSDTIPKWK-------------------DPKTGELEALSFD 100
           GLGL A +  D+C   + FP  T   W                    + +    EAL F 
Sbjct: 15  GLGLSAHII-DHCNLILKFPEGTNSTWVCLHLSGFFLRFHWFYCDQYNAQFKVFEALEFK 73

Query: 101 FNLCEAVATWE 111
           +N+CEAV  WE
Sbjct: 74  YNVCEAVLLWE 84


>UniRef100_UPI00003266EE UPI00003266EE UniRef100 entry
          Length = 244

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 33  PTYHLTDEDTQALLSLHNTFQKCVSANGL--GLKAAMSSDYCQTTINFPSDTIPKWKDPK 90
           P   LTD   Q L +  +TF+  V+   L  GL  + +S +C+  INF       WK   
Sbjct: 61  PLSPLTDRSIQGLYAPGSTFKMIVAIAALKFGLTNSTNSVFCEGKINFGDRFFHCWKTKG 120

Query: 91  TGELEALSFDFNLCE 105
            G+++ +S     C+
Sbjct: 121 HGKMDIVSAIKESCD 135


>UniRef100_Q9CDK6 Transcription regulator [Lactococcus lactis]
          Length = 102

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 17/47 (36%), Positives = 27/47 (57%)

Query: 8  LLLALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSLHNTFQK 54
          +L+ L   F   + Y++GLSD   + T  LT+E  Q +L L N F++
Sbjct: 49 VLIQLCQTFDVSADYLLGLSDDKNFNTSTLTEEQLQIVLRLINEFEQ 95


>UniRef100_UPI000042EBCA UPI000042EBCA UniRef100 entry
          Length = 296

 Score = 32.0 bits (71), Expect = 3.5
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 15/100 (15%)

Query: 23  IIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDT 82
           ++G+     Y +  +  E TQ  +   +T    ++A  L L +   +++    +  P D 
Sbjct: 195 LMGVGGDDDYFSADIPLEPTQPYVHSLSTSFGALTAPALALFSEKDAEWI---VARPEDL 251

Query: 83  IPKWKDPKTGELE-----ALSFDFN-------LCEAVATW 110
           +PKW D   G+LE       S D N       LCE V +W
Sbjct: 252 LPKWADAANGKLEWRIIKGASHDVNEKEAQAVLCEDVLSW 291


>UniRef100_UPI000029FB90 UPI000029FB90 UniRef100 entry
          Length = 285

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 22/67 (32%), Positives = 32/67 (46%)

Query: 1  MRVLQLGLLLALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANG 60
          +R+L L LLLAL + F A    +I L    V       + D QA+  L    ++ + A  
Sbjct: 5  LRLLALLLLLALLAFFTASEFALIRLRATRVEELAEQGNTDAQAVARLQQRLRRTLLATQ 64

Query: 61 LGLKAAM 67
          LGL  A+
Sbjct: 65 LGLSLAL 71


>UniRef100_UPI000026F710 UPI000026F710 UniRef100 entry
          Length = 270

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 17/44 (38%), Positives = 24/44 (53%), Gaps = 3/44 (6%)

Query: 8   LLLALA---SGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSL 48
           LL+ LA   SGF  +    +GL DP  Y  Y + D  T+AL+ +
Sbjct: 87  LLVGLATTPSGFITVMPDYVGLGDPEKYHPYTIADPHTRALIDM 130


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.319    0.134    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 179,166,140
Number of Sequences: 2790947
Number of extensions: 6008776
Number of successful extensions: 14535
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 14523
Number of HSP's gapped (non-prelim): 12
length of query: 111
length of database: 848,049,833
effective HSP length: 87
effective length of query: 24
effective length of database: 605,237,444
effective search space: 14525698656
effective search space used: 14525698656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)


Lotus: description of TM0266.9