BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0265.11
         (1543 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9SQW9 Putative retroelement pol polyprotein [Arabidop...  1103  0.0
UniRef100_Q84ZV5 Polyprotein [Glycine max]                           1086  0.0
UniRef100_Q9LHM4 Retroelement pol polyprotein [Arabidopsis thali...  1008  0.0
UniRef100_Q947Y6 Putative retroelement [Oryza sativa]                 980  0.0
UniRef100_Q7XFZ5 Putative retroelement [Oryza sativa]                 974  0.0
UniRef100_Q9LP90 T32E20.30 [Arabidopsis thaliana]                     971  0.0
UniRef100_Q9FW76 Putative gag-pol polyprotein [Oryza sativa]          948  0.0
UniRef100_Q7XW39 OSJNBb0062H02.17 protein [Oryza sativa]              934  0.0
UniRef100_Q8SA93 Putative polyprotein [Zea mays]                      932  0.0
UniRef100_Q9C7H8 Gypsy/Ty3 element polyprotein, putative [Arabid...   931  0.0
UniRef100_Q7XSK7 OSJNBa0059D20.8 protein [Oryza sativa]               930  0.0
UniRef100_Q7XJX3 OSJNBa0004L19.16 protein [Oryza sativa]              899  0.0
UniRef100_Q8RUU3 Putative gag-pol polyprotein [Oryza sativa]          893  0.0
UniRef100_Q7XEK0 Hypothetical protein [Oryza sativa]                  888  0.0
UniRef100_Q8SA91 Putative gag-pol polyprotein [Zea mays]              881  0.0
UniRef100_Q60E20 Putative polyprotein [Oryza sativa]                  879  0.0
UniRef100_Q947Y5 Putative retroelement [Oryza sativa]                 863  0.0
UniRef100_Q8W150 Polyprotein [Oryza sativa]                           836  0.0
UniRef100_Q75LZ2 Putative gag-pol polyprotein [Oryza sativa]          782  0.0
UniRef100_Q8LLZ2 Putative retroelement [Oryza sativa]                 754  0.0

>UniRef100_Q9SQW9 Putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 1103 bits (2854), Expect = 0.0
 Identities = 567/1187 (47%), Positives = 775/1187 (64%), Gaps = 25/1187 (2%)

Query: 336  HKCPERAMRVLILGDGETMDEDGEIVMLEEEAEEIEEEE-----TVECKLMGVLGCMGEH 390
            HKC  + ++ L +    T + + E  ++EE  E + EEE         K+M +     E 
Sbjct: 453  HKCKPQKLKGLAI----TEEVEEESPLIEELNEPLTEEEGDPEPAEGFKVMTLSSLNDES 508

Query: 391  QTQTMKLAGQVANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHKVVTR 450
            Q Q+MK+ G + N ++++L+DSGA+ NFIS  +    G ++T   +  +K+G G  + + 
Sbjct: 509  QEQSMKMRGYIGNTKVVLLVDSGATCNFISEALVREKGWLVTQTRSFGVKVGGGRIIKSS 568

Query: 451  GICRGIKAKLGSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGEQVV 510
            G C  I  ++  IE   D  + +LG LDLVLG SWL+ LG+   +W+ L + +  G   V
Sbjct: 569  GKCVDIPLEVQGIEFVQDYYLFDLGDLDLVLGFSWLAGLGETRANWRDLRISWQIGRTWV 628

Query: 511  QLQG----MRGKDSYQSNLHSFLSDTHGREQMEWWGPQLQVVEATKKGHE---IPQELRA 563
             L G     RG+ S +S +   +  T     +E     L  +  +KK  E   +   ++ 
Sbjct: 629  SLYGDPDLCRGQISMRS-MERVIKYTGTAYLLE-----LASLFESKKQEEQTALQPAIQR 682

Query: 564  VLADFHEVFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAG 623
            +L  +  VF     LPPVR+R H ITL     P+N+RPYRY   QK EIE+ V E+L A 
Sbjct: 683  LLDQYQGVFQTPQLLPPVRNREHAITLQEGSSPVNIRPYRYSFAQKNEIEKLVREMLNAQ 742

Query: 624  IIRPSMSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFS 683
            IIRPS+S +SSPV+LVKKKD  WR CVDYRALN+ATIPDKYPIP+++ELLDEL GA +FS
Sbjct: 743  IIRPSVSPYSSPVLLVKKKDGGWRFCVDYRALNEATIPDKYPIPVIEELLDELKGATVFS 802

Query: 684  KIDLKSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRK 743
            K+DLKSGY QIR+   D+ KT F+TH GHYE+LVMPFGL NAP+TFQ++MND+FRPYLRK
Sbjct: 803  KLDLKSGYFQIRMKLSDVEKTAFKTHEGHYEFLVMPFGLTNAPSTFQSVMNDLFRPYLRK 862

Query: 744  FVLVFFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAG 803
            FVLVFFDDIL+YS  +  H  HL+ VL +L  + F AN  KC FG  +I YLGHIIS  G
Sbjct: 863  FVLVFFDDILVYSPDMKTHLKHLETVLQLLHLHQFYANFKKCTFGSTRISYLGHIISEQG 922

Query: 804  VSVDPEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGE 863
            V+ DPEKV+ +++WP PK+V  +RGFLG TGYYR+F+KNYG++A+PL +  KK++F W E
Sbjct: 923  VATDPEKVEAMLQWPLPKSVTELRGFLGFTGYYRRFVKNYGQIARPLRDQLKKNSFDWNE 982

Query: 864  EAKQAFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNG 923
             A  AF  LK  +++ PVL LPDF + F VE DA+G GIGAVL Q ++ IA+ S+A S+ 
Sbjct: 983  AATSAFQALKAAVSALPVLVLPDFQQEFTVETDASGMGIGAVLSQNKRLIAFLSQAFSSQ 1042

Query: 924  NLTKSVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLL 983
               +SVYE+EL+A+V  +  W+HYL  K F + TD +SL+H L+QK  S  QQ W +KL 
Sbjct: 1043 GRIRSVYERELLAIVKAVTKWKHYLSSKEFIIKTDQRSLRHLLEQKSVSTIQQRWASKLS 1102

Query: 984  GYQFEVKYKPGQENKAADALSRRGDESDFFSL-VSFPLWDDRKKLLEEIASDPYIKNLLQ 1042
            G ++ ++YKPG +NK ADALSRR        L ++ P   D   L  EI  D  +  +L+
Sbjct: 1103 GLKYRIEYKPGVDNKVADALSRRPPTEALSQLTITGPPTIDLTALKAEIQQDHELSQILK 1162

Query: 1043 DVQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLA 1102
            +  Q       F+V  G++  +G LV+   SP IP +L+++H SP GGH G L+T++RL 
Sbjct: 1163 NWAQGDHHDSDFTVADGLIYRKGCLVIPVGSPFIPKMLEKFHTSPIGGHEGALKTFKRLT 1222

Query: 1103 ESLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKS 1162
              +YW G+++ V ++++ C  CQ  KYS +SP GLL P P+P  +W D+SLDF+ GLP S
Sbjct: 1223 SEVYWRGLRKDVVNYIKGCQICQENKYSTLSPAGLLSPLPIPQQIWSDVSLDFVEGLPSS 1282

Query: 1163 KGYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSH 1222
              +  ILVVVDRLSKYSHFI LKHP+TAK++ E F+R++V+LHG PNT+ SDRD IF+S 
Sbjct: 1283 NRFNCILVVVDRLSKYSHFIPLKHPFTAKTVVEAFIRDVVKLHGFPNTLVSDRDRIFLSG 1342

Query: 1223 FWSELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFWY 1282
            FWSELFKLQGT L+ S++YHP+TDGQTEV+NRCLESYLRCFA   P +W  W+PWAE+WY
Sbjct: 1343 FWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRCLESYLRCFAGRRPTSWFQWLPWAEYWY 1402

Query: 1283 NSTFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVALELSERDEALKQLRTHLQRAQE 1342
            N+++H +   TPF+ VYGR+ P ++R+    T    V   L +RD  L +LR +L+ AQ 
Sbjct: 1403 NTSYHSATKTTPFQAVYGREPPVLLRYGDIPTNNANVEELLKDRDGMLVELRENLEIAQA 1462

Query: 1343 QMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVAY 1402
            QM   A+K RRD++F+I EWV+LKLRP+RQ SV  R N+KL+ R++GPF++  +IG VAY
Sbjct: 1463 QMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSVAHRKNEKLSQRYFGPFKVLHRIGQVAY 1522

Query: 1403 KLKLPVESRIHPVFHVSLLKRAIGNYQVQGQLPTDLGIEEATDIYPEAILGTRIIRQGDS 1462
            KL+LP  S IHPVFHVS LKRA+       +LP  L      +  PE +L  R  +   +
Sbjct: 1523 KLQLPEHSTIHPVFHVSQLKRAVPPSFTPQELPKILSPTLEWNTGPEKLLDIR--QSNTN 1580

Query: 1463 EVHQSLIKWKNRSIDDVTWEDNEVLAGQFPEFCLEDKAVSKEGGIER 1509
               + L++W   S  + TWE    L  Q+P+F LEDK     G I+R
Sbjct: 1581 SGPEVLVQWSGLSTLESTWEPLLTLVQQYPDFDLEDKVSLLRGSIDR 1627


>UniRef100_Q84ZV5 Polyprotein [Glycine max]
          Length = 1552

 Score = 1086 bits (2808), Expect = 0.0
 Identities = 563/1198 (46%), Positives = 769/1198 (63%), Gaps = 25/1198 (2%)

Query: 330  KISPTLHKCPERAMRVLILGDGETMDEDGEIVMLEEEAEEIEEEETVECKLMGVLGCMGE 389
            K SP  HKCP R + +L L + +  D+  E VM+ EEA   ++   +    M      G 
Sbjct: 333  KFSPA-HKCPNRQVMLLQLEETDE-DQTDEQVMVTEEANMDDDTHHLSLNAM-----RGS 385

Query: 390  HQTQTMKLAGQVANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHKVVT 449
            +   T++  GQV  + + IL+D G+S NFI P++   L L + P     + +G+G  +  
Sbjct: 386  NGVGTIRFTGQVGGIAVKILVDGGSSDNFIQPRVAQVLKLPVEPAPNLRVLVGNGQILSA 445

Query: 450  RGICRGIKAKLGSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGEQV 509
             GI + +   +   E+ +   +L++ G D++LG +WL+TLG  + D+  LT++F   ++ 
Sbjct: 446  EGIVQQLPLHIQGQEVKVPVYLLQISGADVILGSTWLATLGPHVADYAALTLKFFQNDKF 505

Query: 510  VQLQGMRGKDSYQSNLHSFLSDTHGREQMEWWGPQL---QVVEATKKG--HEIPQELRAV 564
            + LQG    ++ Q+ LH F    + +   E +  QL   +V E T K     I  EL  +
Sbjct: 506  ITLQGEGNSEATQAQLHHFRRLQNTKSIEECFAIQLIQKEVPEDTLKDLPTNIDPELAIL 565

Query: 565  LADFHEVFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGI 624
            L  + +VF     LPP R + H I L    GP+ VRPYRYPH QK++IE+ + E+L  GI
Sbjct: 566  LHTYAQVFAVPASLPPQREQDHAIPLKQGSGPVKVRPYRYPHTQKDQIEKMIQEMLVQGI 625

Query: 625  IRPSMSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSK 684
            I+PS S FS P++LVKKKD SWR C DYRALN  T+ D +P+P VDELLDEL+GA  FSK
Sbjct: 626  IQPSNSPFSLPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSK 685

Query: 685  IDLKSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKF 744
            +DL+SGYHQI V  ED  KT FRTH+GHYE+LVMPFGL NAPATFQ +MN IF+  LRKF
Sbjct: 686  LDLRSGYHQILVQPEDREKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKF 745

Query: 745  VLVFFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGV 804
            VLVFFDDILIYS S  +H  HL+ VL  L  +   A  SKC FG  ++DYLGH +SG GV
Sbjct: 746  VLVFFDDILIYSASWKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLGV 805

Query: 805  SVDPEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGEE 864
            S++  KVQ +++WP P NVK +RGFLGLTGYYR+FIK+Y  +A PLT+L +KD+F W  E
Sbjct: 806  SMENTKVQAVLDWPTPNNVKQLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKDSFLWNNE 865

Query: 865  AKQAFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGN 924
            A+ AF KLK  MT +PVL+LPDF + F +E DA+G G+GAVL Q   PIAYFSK L+   
Sbjct: 866  AEAAFVKLKKAMTEAPVLSLPDFSQPFILETDASGIGVGAVLGQNGHPIAYFSKKLAPRM 925

Query: 925  LTKSVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLG 984
              +S Y +EL+A+   +  +RHYLLG  F + TD +SLK  + Q + +P+QQ WL K LG
Sbjct: 926  QKQSAYTRELLAITEALSKFRHYLLGNKFIIRTDQRSLKSLMDQSLQTPEQQAWLHKFLG 985

Query: 985  YQFEVKYKPGQENKAADALSRRGDESDFFSLVSFPLWDDRKKLLEEIASDPYIKNLLQDV 1044
            Y F+++YKPG++N+AADALSR      F    S P     ++L   + SDP++K L++  
Sbjct: 986  YDFKIEYKPGKDNQAADALSRM-----FMLAWSEPHSIFLEELRARLISDPHLKQLMETY 1040

Query: 1045 QQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLAES 1104
            +Q   +   ++V +G+L ++ R+V+      +  +LQEYH SP GGH+G  RT  RL   
Sbjct: 1041 KQGADAS-HYTVREGLLYWKDRVVIPAEEEIVNKILQEYHSSPIGGHAGITRTLARLKAQ 1099

Query: 1105 LYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKSKG 1164
             YW  MQ  V+ +++ C  CQ+ K +   P GLLQP P+P  VWED+++DFI GLP S G
Sbjct: 1100 FYWPKMQEDVKAYIQKCLICQQAKSNNTLPAGLLQPLPIPQQVWEDVAMDFITGLPNSFG 1159

Query: 1165 YEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSHFW 1224
               I+VV+DRL+KY+HFI LK  Y +K +AE F+  IV+LHGIP ++ SDRD +F S FW
Sbjct: 1160 LSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFW 1219

Query: 1225 SELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFWYNS 1284
              LFKLQGT L MSS+YHP++DGQ+EV+N+CLE YLRCF  +HPK W   +PWAEFWYN+
Sbjct: 1220 QHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWAEFWYNT 1279

Query: 1285 TFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVALELSERDEALKQLRTHLQRAQEQM 1344
             +H S+G TPF  +YGR+ P + R   +      V  +L++RD  L +L+ +L RAQ+ M
Sbjct: 1280 AYHMSLGMTPFRALYGREPPTLTRQACSIDDPAEVREQLTDRDALLAKLKINLTRAQQVM 1339

Query: 1345 ASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVAYKL 1404
               A+KKR D+SF IG+ V +KL+P+RQHS V R NQKL+ R++GPF++  KIG VAYKL
Sbjct: 1340 KRQADKKRLDVSFQIGDEVLVKLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIGDVAYKL 1399

Query: 1405 KLPVESRIHPVFHVSLLKRAIGNYQVQGQLPTDLGIEEATDI-YPEAILGTRIIRQGDSE 1463
            +LP  +RIHPVFHVS LK   G  Q    LP  L + E   +  P  IL +RII +G ++
Sbjct: 1400 ELPSAARIHPVFHVSQLKPFNGTAQ-DPYLPLPLTVTEMGPVMQPVKILASRIIIRGHNQ 1458

Query: 1464 VHQSLIKWKNRSIDDVTWEDNEVLAGQFPEFCLEDKAVSKEGGIERDSNTKWGMGLGK 1521
            + Q L++W+N   D+ TWED E +   +P F LEDK V K  G     N   GM  G+
Sbjct: 1459 IEQILVQWENGLQDEATWEDIEDIKASYPTFNLEDKVVFKGEG-----NVTNGMSRGE 1511


>UniRef100_Q9LHM4 Retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 1008 bits (2607), Expect = 0.0
 Identities = 506/1152 (43%), Positives = 730/1152 (62%), Gaps = 17/1152 (1%)

Query: 354  MDEDGEIVMLEEEAEEIEEEETVECKLMGVLGCMGEHQTQTMKLAGQVANVELLILIDSG 413
            MD D E     EE    ++E   +  +  V G  G    +TM++ G      + ILIDSG
Sbjct: 352  MDVDEEFEDAREELVNDDDEHMPQISVNAVSGIAGY---KTMRVKGTYDKKIIFILIDSG 408

Query: 414  ASHNFISPKITSALGLVITPITTRSIKLGDGHKVVTRGICRGIKAKLGSIEITIDALVLE 473
            ++HNF+ P   + LG  +       + + DG K+   G       KL +     D L++ 
Sbjct: 409  STHNFLDPNTAAKLGCKVDTAGLTRVSVADGRKLRVEGKVTDFSWKLQTTTFQSDILLIP 468

Query: 474  LGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGEQVVQLQGMRGKDSYQSNLHSFLSDTH 533
            L G+D+VLGV WL TLG++  ++K L M+F +  Q V L G+      +           
Sbjct: 469  LQGIDMVLGVQWLETLGRISWEFKKLEMRFKFNNQKVLLHGLTSGSVREVKAQKLQKLQE 528

Query: 534  GREQMEWWGPQLQVVEATKKG--------HEIPQE--LRAVLADFHEVFTKKIQLPPVRS 583
             + Q+     Q +V E+T+           E+ +E  +  VL ++ ++F +   LPP R 
Sbjct: 529  DQVQLAMLCVQ-EVSESTEGELCTINALTSELGEESVVEEVLNEYPDIFIEPTALPPFRE 587

Query: 584  RV-HQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGIIRPSMSSFSSPVILVKKK 642
            +  H+I L     P+N RPYRY  HQK EI++ V +LL  G ++ S S ++SPV+LVKKK
Sbjct: 588  KHNHKIKLLEGSNPVNQRPYRYSIHQKNEIDKLVEDLLTNGTVQASSSPYASPVVLVKKK 647

Query: 643  DKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSKIDLKSGYHQIRVHEEDIP 702
            D +WR+CVDYR LN  T+ D +PIP++++L+DEL GAVIFSKIDL++GYHQ+R+  +DI 
Sbjct: 648  DGTWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQ 707

Query: 703  KTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKFVLVFFDDILIYSKSLLEH 762
            KT F+TH+GH+EYLVMPFGL NAPATFQ +MN IF+P+LRKFVLVFFDDIL+YS SL EH
Sbjct: 708  KTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEH 767

Query: 763  RDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGVSVDPEKVQCIVEWPEPKN 822
            R HLK V  V+ +N   A  SKC F   +++YLGH IS  G+  DP K++ + EWP+P  
Sbjct: 768  RQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAKIKAVKEWPQPTT 827

Query: 823  VKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGEEAKQAFHKLKTVMTSSPVL 882
            +K +RGFLGL GYYR+F++++G +A PL  LTK D F W   A+QAF  LK  +  +PVL
Sbjct: 828  LKQLRGFLGLAGYYRRFVRSFGVIAGPLHALTKTDAFEWTAVAQQAFEDLKAALCQAPVL 887

Query: 883  ALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGNLTKSVYEKELMALVLCIQ 942
            +LP FDK F VE DA G+GIGAVLMQ+  P+AY S+ L    L  S+YEKEL+A++  ++
Sbjct: 888  SLPLFDKQFVVETDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVR 947

Query: 943  HWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLGYQFEVKYKPGQENKAADA 1002
             WRHYLL   F + TD +SLK+ L+Q++++P QQ WL KLL + +E++Y+ G+EN  ADA
Sbjct: 948  KWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADA 1007

Query: 1003 LSRRGDESDFFSLVSFPLWDDRKKLLEEIASDPYIKNLLQDVQQDPQSKPGFSVLQGVLL 1062
            LSR          ++    D  K +    A+D  +++++  +Q+DP SK  FS  Q +L 
Sbjct: 1008 LSRVEGSEVLHMAMTVVECDLLKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILR 1067

Query: 1063 YQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLAESLYWVGMQRTVRDFVRACD 1122
             + ++V+         +L   HGS  GGHSG   T++R+    YW GM + ++ ++R+C 
Sbjct: 1068 RKSKIVVPANDNIKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCG 1127

Query: 1123 TCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKSKGYEAILVVVDRLSKYSHFI 1182
            TCQ+ K    +  GLLQP P+P+ +W ++S+DFI GLP S G   I+VVVDRLSK +HFI
Sbjct: 1128 TCQQCKSDPAASPGLLQPLPIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFI 1187

Query: 1183 LLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSHFWSELFKLQGTKLKMSSSYH 1242
             L HPY+A ++A  ++  + +LHG P ++ SDRD +F S FW E F LQG  LK++S+YH
Sbjct: 1188 ALSHPYSALTVAHAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYH 1247

Query: 1243 PETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFWYNSTFHCSIGQTPFEVVYGRK 1302
            P++DGQTEV+NRCLE+YLRC   D P+ WS W+  AE+WYN+ +H S   TPFE+VYG+ 
Sbjct: 1248 PQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQV 1307

Query: 1303 APPIIRFLTNETKVVAVALELSERDEALKQLRTHLQRAQEQMASYANKKRRDLSFDIGEW 1362
             P  + +L  E+KV  VA  L ER++ L  L+ HL RAQ +M  +A++ R +  F+IG++
Sbjct: 1308 PPVHLPYLPGESKVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDY 1367

Query: 1363 VFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVAYKLKLPVESRIHPVFHVSLLK 1422
            V++KL+P+RQ SVV R NQKL+ +++GP++I D+ G VAYKL LP  S++HPVFHVS LK
Sbjct: 1368 VYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLK 1427

Query: 1423 RAIGNYQVQGQLPTDLGIEEATDIYPEAILGTRIIRQGDSEVHQSLIKWKNRSIDDVTWE 1482
              +GN      LP+ +  ++  +  PE ++  +++ +    V + L+KW N  +++ TWE
Sbjct: 1428 VLVGNVSTTVHLPSVM--QDVFEKVPEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWE 1485

Query: 1483 DNEVLAGQFPEF 1494
                L   FPEF
Sbjct: 1486 FLFDLQKTFPEF 1497


>UniRef100_Q947Y6 Putative retroelement [Oryza sativa]
          Length = 1461

 Score =  980 bits (2533), Expect = 0.0
 Identities = 516/1172 (44%), Positives = 704/1172 (60%), Gaps = 53/1172 (4%)

Query: 363  LEEEAEEIEEEET-VECKLMGVLGCMGEHQTQTMKLAGQVANVELLILIDSGASHNFISP 421
            +E+E EE  E+E   E  +  +    G      + L  Q+    L+ L+D+G++HNFI  
Sbjct: 311  VEDEDEEAPEDEVDAEAPVFSLHAVAGVAVGHPILLRVQLGATTLVALVDTGSTHNFIGE 370

Query: 422  KITSALGLVITPITTRSIKLGDGHKVVTRGICRGIKAKLGSIEITIDALVLELGGLDLVL 481
               +  GL + P    +  + +G KV   G+ R     +  +   +D  V+ L G D+VL
Sbjct: 371  SAAARTGLSVQPRPRMTATVANGEKVACPGVLRHAPITIEGMPFHVDLYVMPLAGYDIVL 430

Query: 482  GVSWLSTLGKVIMDWKLLTMQFVYGEQVVQLQGMRGKDSYQSNLHSFLSDTHGREQMEWW 541
            G  W++ LG+  M W + T    +                         D  GR  + W 
Sbjct: 431  GTQWMAKLGR--MSWDVTTRALTF-------------------------DLEGRT-ICWQ 462

Query: 542  GPQLQVVEATKKGHEIPQELRAVLADFHEVFTKKIQLPPVRSRVHQITLNPEHGPINVRP 601
            G   Q   A +        L  +L  F +VFT+   LPP R R H I L     P+ VRP
Sbjct: 463  GAPNQDGPAVRAASADDSLLGGLLDSFADVFTEPTGLPPQRGRDHAIVLKQGTSPVAVRP 522

Query: 602  YRYPHHQKEEIERQVTELLEAGIIRPSMSSFSSPVILVKKKDKSWRMCVDYRALNKATIP 661
            YRYP   K+E+ERQ   ++  GI+R S S+FSSPV+LVKK D SWR CVDYRALN  T+ 
Sbjct: 523  YRYPAAHKDELERQCAAMISQGIVRRSDSAFSSPVLLVKKADSSWRFCVDYRALNALTVK 582

Query: 662  DKYPIPIVDELLDELNGAVIFSKIDLKSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFG 721
            D +PIP+VDELLDEL+GA  FSK+DL+SGYHQ+R+  EDI KT FRTH+G YE+LVMPFG
Sbjct: 583  DAFPIPVVDELLDELHGARFFSKLDLRSGYHQVRMRPEDIHKTAFRTHDGLYEFLVMPFG 642

Query: 722  LMNAPATFQAIMNDIFRPYLRKFVLVFFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVAN 781
            L NAPATFQA+MND+ R +LR+FVLVFFDDILIYS +  +H  HL+ VLTVL  +     
Sbjct: 643  LCNAPATFQALMNDVLRSFLRRFVLVFFDDILIYSDTWADHLRHLRAVLTVLREHKLFIK 702

Query: 782  QSKCKFGCAQIDYLGHIISGAGVSVDPEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIK 841
            +SKC FG   + YLGH+IS AGV++DP KVQ I EWP+P++ + VRGFLGL GYYRKF+ 
Sbjct: 703  RSKCAFGVDSVAYLGHVISAAGVAMDPAKVQAIREWPQPRSARAVRGFLGLAGYYRKFVH 762

Query: 842  NYGKMAKPLTELTKKDNFTWGEEAKQAFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRG 901
            NYG +A PLT L KK+ F W E A  AF  LK  ++S+P+LA+PDF K+F VECDA+  G
Sbjct: 763  NYGTIAAPLTALLKKEGFAWTEAATAAFDALKAAVSSAPILAMPDFTKAFTVECDASSHG 822

Query: 902  IGAVLMQQRQPIAYFSKALSNGNLTKSVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKS 961
             GAVL+Q   P+A+FS+ ++  +   + YE+EL+ LVL ++HWR YL G+ FTV TDH S
Sbjct: 823  FGAVLIQDGHPLAFFSRPVAPRHRALAAYERELIGLVLAVRHWRPYLWGRHFTVKTDHYS 882

Query: 962  LKHFLQQKISSPDQQCWLAKLLGYQFEVKYKPGQENKAADALSRRGDESDFFSLV-SFPL 1020
            LK+ L Q++S+  Q  W+ KLLG+ F V+YKPG  N  ADALSRR    D   LV S P 
Sbjct: 883  LKYLLDQRLSTIPQHHWVGKLLGFDFTVEYKPGAANTVADALSRRDTTEDASVLVLSAPR 942

Query: 1021 WDDRKKLLEEIASDPYIKNLLQDVQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLL 1080
            +D  ++L +    DP +  L  +++   ++ P +S+  G++L+ GRL L P SP +  +L
Sbjct: 943  FDFIERLRQAQDVDPALVALQAEIRSGTRAGP-WSMADGMVLFAGRLYLPPASPLLQEVL 1001

Query: 1081 QEYHGSPTGGHSGFLRTYRRLAESLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQP 1140
            +  H     GH G  RT  RL    ++  M+  V+DFVR C+ CQR K   + P GLL P
Sbjct: 1002 RAVHEE---GHEGVQRTLHRLRRDFHFPNMKSVVQDFVRTCEVCQRYKAEHLQPAGLLLP 1058

Query: 1141 FPVPNAVWEDLSLDFIIGLPKSKGYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVRE 1200
             PVP  VW D++LDF+  LP+ +G   IL VVDR SKY HFI L HPY+A+S+A+VF  E
Sbjct: 1059 LPVPQGVWTDVALDFVEALPRVRGKSVILTVVDRFSKYCHFIPLAHPYSAESVAQVFFAE 1118

Query: 1201 IVRLHGIPNTVKSDRDPIFVSHFWSELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYL 1260
            IVRLHG+P ++ SDRDP+F S FWSEL +L GTKL M++++HP++DGQ+E  NR +  YL
Sbjct: 1119 IVRLHGVPQSMVSDRDPVFTSAFWSELMRLVGTKLHMTTAFHPQSDGQSEAANRVIIMYL 1178

Query: 1261 RCFASDHPKTWSFWVPWAEFWYNSTFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVA 1320
            RC   D P+ W  W+PWAEF +N+ +  S+  TPF VVYGR  P I  +   +T+V AVA
Sbjct: 1179 RCLTGDRPRQWLRWLPWAEFVFNTAYQTSLRDTPFRVVYGRDPPSIRSYEPGDTRVAAVA 1238

Query: 1321 LELSERDEALKQLRTHLQRAQEQMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRIN 1380
              + ER E L+ +R  L++AQ     Y +K  R +SF +G+WV L+LR     S+   ++
Sbjct: 1239 KSMEERSEFLEDIRYRLEQAQAIQKKYYDKSHRAVSFQVGDWVLLRLRQRAPASLSLAVS 1298

Query: 1381 QKLAARFYGPFQIEDKIGTVAYKLKLPVESRIHPVFHVSLLKRAIGNYQVQGQLPTDLGI 1440
             KL  R++GP++I + I  VA +L LP  +R+H VFH+ LLK+  G        P     
Sbjct: 1299 GKLKPRYFGPYRIAEMINEVAARLALPAGARLHDVFHIGLLKKWHG-APPDAPPPLPNVH 1357

Query: 1441 EEATDIYPEAILGTRIIRQGDSEVHQSLIKWKNRSIDDVTWEDNEVLAGQFPEFCLEDKA 1500
              A    PE ++  R+ R     V Q L++WK  S    TWED E    ++P   LED+ 
Sbjct: 1358 HGAVACEPERVIKARLAR----GVRQVLVQWKGTSAASATWEDREPFFARYPALQLEDEL 1413

Query: 1501 VSKEGGIERDSNTKWGMGLGKPKIWKVYVRKK 1532
                GG     +  WG         + YVR++
Sbjct: 1414 PLDGGG-----DVMWG---------RTYVRRR 1431


>UniRef100_Q7XFZ5 Putative retroelement [Oryza sativa]
          Length = 1476

 Score =  974 bits (2519), Expect = 0.0
 Identities = 513/1157 (44%), Positives = 702/1157 (60%), Gaps = 31/1157 (2%)

Query: 356  EDGEIVMLEEEAEEIEEEETVECKLMGVLGCMGEHQTQTMKLAGQVANVELLILIDSGAS 415
            E G I   ++  E+  EE TVE  +  +    G    + + L   +    L+ L+D+G++
Sbjct: 300  EGGAIEEGDDTVEDDTEEATVEAPVFSLHAVAGIPLGKPILLQVTLGAASLVALVDTGST 359

Query: 416  HNFISPKITSALGLVITPITTRSIKLGDGHKVVTRGICRGIKAKLGSIEITIDALVLELG 475
            HNFI        GL + P    +  + +G KV   G+ R     +  +   +D  V+ L 
Sbjct: 360  HNFIGEDAALRTGLPVQPRPRLTATVANGEKVSCPGVLRRAPITIQGMAFDVDLYVMPLA 419

Query: 476  GLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGEQVVQLQGMRGKDSYQSNLHSFLSDTHGR 535
            G D+VLG  W++ LG  I  W + T         V  Q      S+QS         H R
Sbjct: 420  GYDMVLGTQWMAHLGTTIA-WDVTT-------GTVSFQHQGRTVSWQS------LPPHQR 465

Query: 536  EQMEWWGPQLQVVEATKKGHEIPQE------LRAVLADFHEVFTKKIQLPPVRSRVHQIT 589
              +        +V AT      P        L  +L  F +VF +   LPP R R H I 
Sbjct: 466  ADVHAVSTGTSLVAATGSSSSTPAPTTEPALLDGLLGSFDDVFAEPRGLPPPRGRDHAIH 525

Query: 590  LNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGIIRPSMSSFSSPVILVKKKDKSWRMC 649
            L P   P+ VRPYRYP   K+E+ERQ   ++E G+IR S S+FSSPV+LVKK D SWR C
Sbjct: 526  LLPGAPPVAVRPYRYPVAHKDELERQCAVMMEQGLIRRSTSAFSSPVLLVKKADGSWRFC 585

Query: 650  VDYRALNKATIPDKYPIPIVDELLDELNGAVIFSKIDLKSGYHQIRVHEEDIPKTTFRTH 709
            VDYRALN  TI D YPIP+VDELLDEL+GA  F+K+DL+SGYHQ+R+  ED+ KT FRTH
Sbjct: 586  VDYRALNAITIKDAYPIPVVDELLDELHGAKFFTKLDLRSGYHQVRMRAEDVAKTAFRTH 645

Query: 710  NGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKFVLVFFDDILIYSKSLLEHRDHLKLV 769
            +G YE+LVMPFGL NAPATFQA+MNDI R YLR+FVLVFFDDILIYS +  +H  H++ V
Sbjct: 646  DGLYEFLVMPFGLCNAPATFQALMNDILRIYLRRFVLVFFDDILIYSNTWADHLRHIRAV 705

Query: 770  LTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGVSVDPEKVQCIVEWPEPKNVKGVRGF 829
            L +L  +     +SKC FG + I YLGHII   GVS+DP KVQ +V+WP+P++ + VRGF
Sbjct: 706  LLLLRQHRLFVKRSKCAFGVSSISYLGHIIGATGVSMDPAKVQAVVDWPQPRSARTVRGF 765

Query: 830  LGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGEEAKQAFHKLKTVMTSSPVLALPDFDK 889
            LGL GYYRKF+ +YG +A PLT LTKK+ F W +E   AFH LK  +T++PVLALPDF K
Sbjct: 766  LGLAGYYRKFVHDYGTIAAPLTALTKKEGFRWSDEVATAFHALKHAVTTAPVLALPDFVK 825

Query: 890  SFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGNLTKSVYEKELMALVLCIQHWRHYLL 949
             F VECDA+  G GAVL+Q + P+A+FS+ ++  +   + YE+EL+ LVL I+HWR YL 
Sbjct: 826  PFVVECDASTHGFGAVLLQDKHPLAFFSRPVAPRHRALAAYERELIGLVLAIRHWRPYLW 885

Query: 950  GKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLGYQFEVKYKPGQENKAADALSRRGDE 1009
            G+AF V TDH SLK+ L Q++++  Q  W+ KLLG+ F V+YK G  N  ADALSRR  +
Sbjct: 886  GRAFVVRTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFTVEYKSGASNVVADALSRRDTD 945

Query: 1010 SDFFSLVSFPLWDDRKKLLEEIASDPYIKNLLQDVQQDPQSKPGFSVLQGVLLYQGRLVL 1069
                  +S P +D  ++L     ++P +  +   +Q   +S P +++  G++++  RL +
Sbjct: 946  EGAVLALSAPRFDYIERLRAAQTTEPALVAIRDAIQAGTRSAP-WALRDGMVMFDSRLYI 1004

Query: 1070 SPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLAESLYWVGMQRTVRDFVRACDTCQRQKY 1129
             P+SP +  +L   H   T GH G  RT  RL    +   M+R V++FVRACDTCQR K 
Sbjct: 1005 PPSSPLLHEILAAIH---TDGHEGVQRTLHRLRRDFHSPAMRRVVQEFVRACDTCQRNKS 1061

Query: 1130 SAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKSKGYEAILVVVDRLSKYSHFILLKHPYT 1189
              + PGGLL P PVP  VW D+ LDF+  LP+  G   IL VVDR SKY HFI L HPYT
Sbjct: 1062 EHLHPGGLLLPLPVPTTVWADIGLDFVEALPRVGGKTVILTVVDRFSKYCHFIPLAHPYT 1121

Query: 1190 AKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSHFWSELFKLQGTKLKMSSSYHPETDGQT 1249
            A+S+A+ F  +IVRLHGIP ++ SDRDP+F S FW EL +L GTK+ M+++ HP++DGQT
Sbjct: 1122 AESVAQAFYADIVRLHGIPQSMVSDRDPVFTSSFWRELMRLTGTKMHMTTAIHPQSDGQT 1181

Query: 1250 EVINRCLESYLRCFASDHPKTWSFWVPWAEFWYNSTFHCSIGQTPFEVVYGRKAPPIIRF 1309
            E  N+ +  YLRCF  D P+ W  W+PWAE+ YN+ +  S+  TPF VVYGR  P I  +
Sbjct: 1182 EAANKVIVMYLRCFTGDRPRQWVRWLPWAEYIYNTAYQTSLRDTPFRVVYGRDPPIIRSY 1241

Query: 1310 LTNETKVVAVALELSERDEALKQLRTHLQRAQEQMASYANKKRRDLSFDIGEWVFLKLRP 1369
               ET+V AVA  +++RDE L  +R  L++AQ     Y +K  R +S+++G+ V L+LR 
Sbjct: 1242 EPGETRVAAVARSMADRDEFLADVRYRLEQAQATHKKYYDKGHRAVSYEVGDLVLLRLRH 1301

Query: 1370 HRQHSVVKRINQKLAARFYGPFQIEDKIGTVAYKLKLPVESRIHPVFHVSLLKRAIGNYQ 1429
                S+ +    KL  R++GP+++ + I  VA +L+LP  +++H VFHV LLK+ +G   
Sbjct: 1302 RAPASLPQVSKGKLKPRYFGPYRVVEVINPVAVRLELPPRAKLHDVFHVGLLKKFVG--A 1359

Query: 1430 VQGQLPTDLGIEE-ATDIYPEAILGTRIIRQGDSEVHQSLIKWKNRSIDDVTWEDNEVLA 1488
                 P    +   A D  PE +  +R+ R     V Q L+ WK  S    TWED +   
Sbjct: 1360 APPSPPALPAVHHGAIDPEPERVTRSRLAR----GVRQVLVHWKGESAASATWEDLDTFK 1415

Query: 1489 GQFPEFCLEDKAVSKEG 1505
             ++P F LED+   +EG
Sbjct: 1416 ERYPAFQLEDELALEEG 1432


>UniRef100_Q9LP90 T32E20.30 [Arabidopsis thaliana]
          Length = 1397

 Score =  971 bits (2509), Expect = 0.0
 Identities = 530/1183 (44%), Positives = 727/1183 (60%), Gaps = 116/1183 (9%)

Query: 336  HKCPERAMRVLILGDGETMDEDGEIVMLEEEAEEIEEEETVECKLMGVLGCMGEHQTQTM 395
            HKCP + +RVL + +G  M+     V+     EE   +   +   +     MG     T+
Sbjct: 315  HKCPNKELRVLTVINGFEME-----VLESNSVEEEFHDSVAQFAELSFSSYMGLPSYTTI 369

Query: 396  KLAGQVANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHKVVTRGICRG 455
            K+ G +   E            F  P                 I+LG G  V   G+C  
Sbjct: 370  KMKGSICKGE-------WCHTQFYFPNF--------------HIRLGTGITVQGLGLCDK 408

Query: 456  IKAKL-----GSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGEQVV 510
            +   L       +E+T   + L+LG +D++LG++WL TLG   ++W+   + F+Y  + V
Sbjct: 409  VTMTLPVGCGQELELTTHFITLDLGPVDVILGIAWLRTLGDCKVNWERHELSFLYHGRTV 468

Query: 511  QLQGMRGKDSYQSNLHSFLSDTHGREQMEWWGPQLQVVEATKKGHEIPQELRAVLADFHE 570
             L+G    D+++ +L SF +          +  Q + +E +   H   Q L+        
Sbjct: 469  TLRGDPELDTFKMSLKSFSTK---------FRLQNKELEVSLNSH---QNLKG------- 509

Query: 571  VFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGIIRPSMS 630
                   LPP++   H I+L P    I+VRPYRYPH  KE +E  V+E+L+ GIIR S S
Sbjct: 510  -------LPPIKGNEHAISLLPGTRAISVRPYRYPHAHKEAMEGLVSEMLDNGIIRASKS 562

Query: 631  SFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSKIDLKSG 690
             FSSPV+LVKKKD+SWR CVDYRALN+ATIP+K+PIP++D+LLDEL+GA+IFSK+DL++G
Sbjct: 563  PFSSPVLLVKKKDQSWRFCVDYRALNRATIPNKFPIPMIDQLLDELHGAIIFSKLDLRAG 622

Query: 691  YHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKFVLVFFD 750
            YHQIR+  EDI KTTFRTH+GH+E+LVMPFGL NAPATFQ+ MND+ RP+LRKFVLVFFD
Sbjct: 623  YHQIRMKVEDIEKTTFRTHDGHFEFLVMPFGLSNAPATFQSSMNDMLRPFLRKFVLVFFD 682

Query: 751  DILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGVSVDPEK 810
            DILIYS++  EH +HL +VL VL  + F AN+ K            HI    GVS DP K
Sbjct: 683  DILIYSRNEQEHEEHLAMVLKVLEEHQFYANRKKPY----------HITQ--GVSTDPTK 730

Query: 811  VQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGEEAKQAFH 870
               + +W  P++VK +RGFLGLTGYYR+F+K YG +A+PLTEL KKD+F W E A++AF 
Sbjct: 731  TVAMTKWVTPQSVKELRGFLGLTGYYRRFLKGYGTLARPLTELLKKDSFVWSESAQEAFD 790

Query: 871  KLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGNLTKSVY 930
             LK  M+++PVLALPDF K                              L++    K VY
Sbjct: 791  ALKRAMSTAPVLALPDFGK---------------------------VHGLTSKEQLKPVY 823

Query: 931  EKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLGYQFEVK 990
            E+ELMA+VL IQ W+HYL+G+ F ++TD KSLK   +Q+  S D Q WL KLL Y+F++ 
Sbjct: 824  ERELMAIVLSIQKWKHYLMGRRFVLHTDQKSLKFLQEQREVSMDYQKWLTKLLHYEFDIL 883

Query: 991  YKPGQENKAADALSRRGDESDFFS---LVSF--PLWDDRKKLLEEIASDPYIKNLLQDVQ 1045
            YK G +NKAAD LSR    +  FS   L++F  P       L EEI S+ ++++L+++  
Sbjct: 884  YKLGVDNKAADGLSRMVQPTGSFSSMLLMAFTVPTVLQLHDLYEEIDSNAHLQHLVKECL 943

Query: 1046 QDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLAESL 1105
               Q    ++V +G L  + RL++   S  +P +L EYH    GGHSG L+T +R+ +S 
Sbjct: 944  SAKQGTSAYTVKEGRLWKKQRLIIPKDSKFLPLILAEYHSGLLGGHSGVLKTMKRIQQSF 1003

Query: 1106 YWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKSKGY 1165
            +W GM + ++ FV  C+ CQRQKYS +SP GLLQP P+P  VWED+SLDF+ GLP     
Sbjct: 1004 HWEGMMKDIQKFVAKCEMCQRQKYSTLSPAGLLQPLPIPTQVWEDISLDFVEGLP----- 1058

Query: 1166 EAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSHFWS 1225
                   DRLSKY HFI LKHP+ A  +A +F+ E+V+LHG P ++ SDRD  F+S FW 
Sbjct: 1059 -------DRLSKYGHFIGLKHPFNAVDVARIFIHEVVKLHGFPASIVSDRDNTFLSSFWK 1111

Query: 1226 ELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFWYNST 1285
            + FKL GTKLK S+++HP+TDGQTEV+NR LE+YLRCFAS HPKTW  ++P AE WYNS+
Sbjct: 1112 DCFKLSGTKLKYSTAFHPQTDGQTEVLNRTLETYLRCFASAHPKTWFQYLPRAELWYNSS 1171

Query: 1286 FHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVALELSERDEALKQLRTHLQRAQEQMA 1345
            FH +I  TPF+V+YGR  PPI+RF  N TK   +   L +RD  L  ++ HL  AQ+ M 
Sbjct: 1172 FHTTIKTTPFKVLYGRDPPPIMRFEANSTKNCELEGLLKQRDLMLADIKEHLVNAQQLMK 1231

Query: 1346 SYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVAYKLK 1405
            +  +K RR++ FD    VFLKLRP+RQ+SV KR+ QKLAA+++GPF+I ++IG VAY+LK
Sbjct: 1232 NNDDKHRREVEFDTRNRVFLKLRPYRQNSVTKRVCQKLAAKYFGPFEIMERIGKVAYRLK 1291

Query: 1406 LPVESRIHPVFHVSLLKRAIGNYQVQGQLPTDLGIEEATDIYPEAILGTRIIRQGDSEVH 1465
            LP  S+IH VFHVS LK+ +G++     LP  L  +    + PEA+L TR    G   + 
Sbjct: 1292 LPEGSKIHLVFHVSQLKQVLGDHHQVIPLPEVLTADNEFVVVPEAVLETRYNEDG---LL 1348

Query: 1466 QSLIKWKNRSIDDVTWEDNEVLAGQFPEFCLEDKAVSKEGGIE 1508
            ++L+ W+   + + TWE  + L  QFP   L+DK   + GG E
Sbjct: 1349 EALVHWQGLPVHEDTWEIAKDLKKQFPGLALQDKLHVEGGGGE 1391


>UniRef100_Q9FW76 Putative gag-pol polyprotein [Oryza sativa]
          Length = 1608

 Score =  948 bits (2451), Expect = 0.0
 Identities = 506/1188 (42%), Positives = 717/1188 (59%), Gaps = 19/1188 (1%)

Query: 328  WGKISPTLHKCPERAMRVLILGDGETMDEDGEIVMLEEEAEEIEEEETVECKLMGVLGCM 387
            WG+     HKC       ++      +  D E     E A E EE+  +      +    
Sbjct: 379  WGRD----HKCATTVQLHVVEELINALKTDPEENCNSEGAPESEEDSLMAISFQAL---N 431

Query: 388  GEHQTQTMKLAGQVANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHKV 447
            G   +++++L G V N ELL+L+DSG++H+FI  K+ + L  +        +++ DG ++
Sbjct: 432  GTDSSKSIRLRGWVQNTELLMLVDSGSTHSFIDAKLGAQLCGLQKLNQAIKVQVADGSQL 491

Query: 448  VTRGICRGIKAKLGSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGE 507
                              T D  +L LG  D +LG+ WL     + +DW    + F +  
Sbjct: 492  FCDSFLPNCSWWSQGHSFTSDFRLLPLGSYDAILGMDWLEQFSPMQVDWVHKWIAFQHHG 551

Query: 508  QVVQLQGMRGKDSYQSNLHSFLSDTHGREQMEWWGPQLQVVEATKKGHEIPQELRAVLAD 567
            Q VQLQG+  + S    + +       ++        L V E T     +P+ ++ +L +
Sbjct: 552  QAVQLQGIHPQLSTCFPISNDQLQGMSKKGAVMCLVHLNVAE-TLTATTVPEIVQPILNE 610

Query: 568  FHEVFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGIIRP 627
            F E+F++  +LPP R+  H I L     P+N+RPYRY    K+EIERQV E+L +G+I+P
Sbjct: 611  FQEIFSEPTELPPKRNCDHHIPLVEGAKPVNLRPYRYKPALKDEIERQVAEMLRSGVIQP 670

Query: 628  SMSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSKIDL 687
            S S FSSP +LVKKKD +WR+C+DYR LN  T+  KYP+P++DELLDEL G+  FSK+DL
Sbjct: 671  SSSPFSSPALLVKKKDGTWRLCIDYRQLNDVTVKSKYPVPVIDELLDELAGSKWFSKLDL 730

Query: 688  KSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKFVLV 747
            ++GYHQIR+ E D  KT F+TH+GHYEY VM FGL  APATF + MN+   P LRKF LV
Sbjct: 731  RAGYHQIRMAEGDEYKTAFQTHSGHYEYKVMSFGLTGAPATFLSAMNETLSPVLRKFALV 790

Query: 748  FFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGVSVD 807
            FFDDILIYS +L  H  H++ VL +L ++ +    SKC F   +I YLGH+I  AGV+ D
Sbjct: 791  FFDDILIYSPTLELHLQHVRTVLQLLSAHQWKVKLSKCSFAQQEISYLGHVIGAAGVATD 850

Query: 808  PEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKD-NFTWGEEAK 866
            P K+Q +V WP+P  +K +RGFLGL GYYRKF++++G ++KPLT+L KK   F W  E +
Sbjct: 851  PAKIQDVVSWPQPTTIKKLRGFLGLAGYYRKFVRHFGLISKPLTQLLKKGIPFKWTPEIE 910

Query: 867  QAFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGNLT 926
             AF +LK  + ++PVLALPDF K F +E DA+  GIGAVL Q++ PIAY S+AL      
Sbjct: 911  SAFQQLKQALVAAPVLALPDFSKHFTIETDASDVGIGAVLSQEKHPIAYLSRALGPKTRG 970

Query: 927  KSVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLGYQ 986
             S YEKE MA++L ++HWR YL    F + TDH SL H  +Q++ +P QQ    KLLG Q
Sbjct: 971  LSTYEKEYMAIILAVEHWRPYLQQGEFIILTDHHSLMHLTEQRLHTPWQQKAFTKLLGLQ 1030

Query: 987  FEVKYKPGQENKAADALSRRGDESDFFSLVS--FPLWDDRKKLLEEIASDPYIKNLLQDV 1044
            +++ Y+ G  N AADALSRR       + +S   P W   ++L++    D   K LL ++
Sbjct: 1031 YKICYRKGVSNAAADALSRRESPISEVAAISECIPSW--MQELMQGYQLDGQSKQLLAEL 1088

Query: 1045 QQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLAES 1104
               P S+  + + QG+L Y+G++ +   +     L+ E H +P GGHSGF  TYR++   
Sbjct: 1089 AISPNSRKDYQLCQGILKYKGKIWVGNNTALQHKLVNELHATPLGGHSGFPVTYRKVKSL 1148

Query: 1105 LYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKSKG 1164
              W GM++ +++ +++C  C + K       GLLQP PVP   W+ +SLDFI GLP+S  
Sbjct: 1149 FAWPGMKKLIKEQLQSCQVCLQAKPDRARYPGLLQPLPVPAGAWQTISLDFIEGLPRSSH 1208

Query: 1165 YEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSHFW 1224
            Y  ILVVVD+ SKYSHFI L HP+ A  +A+ F++ I +LHG+P  + SDRD IF S FW
Sbjct: 1209 YNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPRAIISDRDKIFTSQFW 1268

Query: 1225 SELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFWYNS 1284
             +LF   GT L MSS+YHP++DGQTE +N+CLE YLRCF    P  WS W+  AEFWYN+
Sbjct: 1269 DQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCFVHAAPHKWSSWLYLAEFWYNT 1328

Query: 1285 TFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVALELSERDEALKQLRTHLQRAQEQM 1344
            +FH ++ +TPFEV+YG   P       ++ ++  +    +ER    + L+ HL RAQ+QM
Sbjct: 1329 SFHSTLNKTPFEVLYG-YTPSHFGIGLDDCQIADLHEWHTERKFMQQLLQQHLNRAQQQM 1387

Query: 1345 ASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVAYKL 1404
               A+KKR    F +G+WV+LKL+P+ Q  V +R   KLA R+YGPFQ+  ++GTVAY +
Sbjct: 1388 KHQADKKRSFRQFAVGDWVYLKLQPYVQTFVAQRACHKLAFRYYGPFQVMSRVGTVAYHI 1447

Query: 1405 KLPVESRIHPVFHVSLLKRAIG-NYQVQGQLPTDLGIEEATDIYPEAILGTRIIRQGDSE 1463
            +LP  S IHPVFHVS LK A+G + +VQ +LPT LG  +     P   L  R++++G+  
Sbjct: 1448 QLPATSSIHPVFHVSQLKAAVGFSKKVQDELPTSLGALQV----PFQFLDKRLVKKGNRS 1503

Query: 1464 VHQSLIKWKNRSIDDVTWEDNEVLAGQFPEFCLEDKAVSKEGGIERDS 1511
            V Q L  W + S  + TWED E L  +FP      +A  ++ GI R S
Sbjct: 1504 VLQLLTHWYHSSPSESTWEDMEDLFARFPRALAWGQASFQDWGIVRPS 1551


>UniRef100_Q7XW39 OSJNBb0062H02.17 protein [Oryza sativa]
          Length = 1629

 Score =  934 bits (2413), Expect = 0.0
 Identities = 508/1143 (44%), Positives = 706/1143 (61%), Gaps = 14/1143 (1%)

Query: 373  EETVECKLMGVL--GCMGEHQTQTMKLAGQVANVELLILIDSGASHNFISPKITSAL-GL 429
            +  VE  LM V      G      M++ GQ+   E+LIL+DSG+S +FIS ++ S+L G+
Sbjct: 454  DHVVEQTLMAVSLQAVQGTETGGCMRMLGQIQGKEILILVDSGSSASFISKRVASSLMGV 513

Query: 430  VITPITTRSIKLGDGHKVVTRGICRGIKAKLGSIEITIDALVLELGGLDLVLGVSWLSTL 489
            +  P+  + +  G         I        G +  T +  VLEL   D++LG+ WL   
Sbjct: 514  LEQPVHVQVMVAGGAKLHCCSEILNCEWTIQGHVFFT-NLKVLELNNYDMILGMDWLMQH 572

Query: 490  GKVIMDWKLLTMQFVYGEQVVQLQGMRGKDSYQSNLHSF-LSDTHGREQMEWWGPQLQVV 548
              + +DW   ++   Y    +QL G+R      +++ S  L + + R  +     Q   V
Sbjct: 573  SPMTVDWTTKSLIIAYAGTQIQLYGVRSDTEQCAHISSKQLRELNDRTAVSNL-VQFCSV 631

Query: 549  EATKKGHEIPQELRAVLADFHEVFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQ 608
             A +   +IP+ ++ VL +F  VF +   LPP+R   H I L P  GP+NVRPYRY   Q
Sbjct: 632  FALEYQEQIPEVVQTVLTEFSSVFDEPKGLPPIRQFDHTIPLLPGAGPVNVRPYRYTPIQ 691

Query: 609  KEEIERQVTELLEAGIIRPSMSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPI 668
            K EIE QV E+L  GII+PS S FSSPV+LVKKKD SWR CVDYR LN  T+ +KYP+P+
Sbjct: 692  KNEIESQVQEMLSKGIIQPSSSPFSSPVLLVKKKDGSWRFCVDYRHLNAITVKNKYPLPV 751

Query: 669  VDELLDELNGAVIFSKIDLKSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPAT 728
            +DELLDEL GA  FSK+DL+SGYHQIR+H +D  KT F+TH+GH+E+ V+PFGL +APAT
Sbjct: 752  IDELLDELAGAQWFSKLDLRSGYHQIRMHPDDEHKTAFQTHHGHFEFRVLPFGLTSAPAT 811

Query: 729  FQAIMNDIFRPYLRKFVLVFFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFG 788
            FQ +MN +    LR+ VLVF DDILIYSKSL EH  HLK V  +LL +     ++KC F 
Sbjct: 812  FQGVMNSVLATLLRRCVLVFVDDILIYSKSLEEHVQHLKTVFQILLKHQLKVKRTKCSFA 871

Query: 789  CAQIDYLGHIISGAGVSVDPEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAK 848
              ++ YLGHII   GVS DPEK+Q I  WP P +VK +R FLGL+GYYRKF++NYG ++K
Sbjct: 872  QQELAYLGHIIQPNGVSTDPEKIQVIQHWPAPTSVKELRSFLGLSGYYRKFVRNYGILSK 931

Query: 849  PLTELTKKDN-FTWGEEAKQAFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLM 907
            PLT L +K   + W  E + AF  LK  + ++ VLA+PDF   F VE DA+ +GIGAVLM
Sbjct: 932  PLTNLLRKGQLYIWTAETEDAFQALKQALITALVLAMPDFQTPFVVETDASDKGIGAVLM 991

Query: 908  QQRQPIAYFSKALSNGNLTKSVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQ 967
            Q   P+A+ S+AL   +   S YEKE +A++L + HWR YL    F + TDH+SL    +
Sbjct: 992  QNNHPLAFLSRALGLRHPGLSTYEKESLAIMLAVDHWRPYLQHDEFFIRTDHRSLAFLTE 1051

Query: 968  QKISSPDQQCWLAKLLGYQFEVKYKPGQENKAADALSR--RGDESDFFSL-VSFPLWDDR 1024
            Q++++P Q   L KLLG ++++ +K G +N AADALSR    D  +  +L V+ P W + 
Sbjct: 1052 QRLTTPWQHKALTKLLGLRYKIIFKKGIDNSAADALSRYPGSDRVELSALSVAVPEWIN- 1110

Query: 1025 KKLLEEIASDPYIKNLLQDVQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYH 1084
              ++   +SDP   + +Q +  +  + P FS+  GVL +Q RL +         +L   H
Sbjct: 1111 -DIVAGYSSDPDACSKVQTLCINSGAVPNFSLRNGVLYFQNRLWVGHNVDVQQRILANLH 1169

Query: 1085 GSPTGGHSGFLRTYRRLAESLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVP 1144
             +  GGHSG   TY+R+ +   W  ++ TV  +V+AC  CQ+ K   +   G+LQP PVP
Sbjct: 1170 TAAVGGHSGIQVTYQRVKQLFAWPRLRATVVQYVQACSVCQQAKSEHVKYPGMLQPLPVP 1229

Query: 1145 NAVWEDLSLDFIIGLPKSKGYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRL 1204
            +  W+ +SLDF+ GLPKS  +  ILVVVD+ SKYSHF+ L HP++A  +AE +++ I RL
Sbjct: 1230 DHAWQIVSLDFVEGLPKSASFNCILVVVDKFSKYSHFVPLTHPFSALDVAEAYMQHIHRL 1289

Query: 1205 HGIPNTVKSDRDPIFVSHFWSELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFA 1264
            HG+P ++ SDRD IF S  W+ LF+L GT+L+MSSSYHP+TDGQTE +N+CLE++LRCF 
Sbjct: 1290 HGLPQSLISDRDRIFTSTLWTTLFRLAGTQLRMSSSYHPQTDGQTERVNQCLETFLRCFV 1349

Query: 1265 SDHPKTWSFWVPWAEFWYNSTFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVALELS 1324
               P  WS W+  AE+WYN++FH ++G TPFEV+YG K        +   +   +   L 
Sbjct: 1350 HACPSQWSRWLALAEYWYNTSFHSALGTTPFEVLYGHKPRYFGLSASAACRSDDLVEWLH 1409

Query: 1325 ERDEALKQLRTHLQRAQEQMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLA 1384
            ER++    +R HL RAQ +M   A++ R + SF +G+WV+LKL+P  Q SVV R N+KL+
Sbjct: 1410 EREKMQALIRDHLLRAQTRMKQQADQHRSERSFAVGDWVYLKLQPFVQQSVVTRANRKLS 1469

Query: 1385 ARFYGPFQIEDKIGTVAYKLKLPVESRIHPVFHVSLLKRAIG-NYQVQGQLPTDLGIEEA 1443
             RFYGPFQ+ DK+GTVAY+L LP  S IHPV HVS LK+A+    QV   LP  L    A
Sbjct: 1470 FRFYGPFQVLDKVGTVAYRLDLPSSSLIHPVVHVSQLKKALAPTEQVHSPLPV-LDPTNA 1528

Query: 1444 TDIYPEAILGTRIIRQGDSEVHQSLIKWKNRSIDDVTWEDNEVLAGQFPEFCLEDKAVSK 1503
            T + P  IL  R IR+G   V Q  ++W   +    TWE+ + L  +FP      +A ++
Sbjct: 1529 THVCPAQILDRRFIRKGSKLVEQIQVRWTGDAPAATTWENPQELRRRFPTAPAWGQAGTQ 1588

Query: 1504 EGG 1506
             GG
Sbjct: 1589 GGG 1591


>UniRef100_Q8SA93 Putative polyprotein [Zea mays]
          Length = 2749

 Score =  932 bits (2408), Expect = 0.0
 Identities = 502/1193 (42%), Positives = 706/1193 (59%), Gaps = 68/1193 (5%)

Query: 336  HKCPERAMRVLILGDGETMDEDGEIVMLEEEAE-EIEEEETVECKLMGVLGCMGEHQT-- 392
            H CP    R+  L + + +D++ +    EE A+ +I  E+    +   ++  +  H    
Sbjct: 699  HVCP----RLFYLENDDYIDDEPQ----EEGADLQIALEQEPPSRAAAIIPTVSLHALAG 750

Query: 393  ----QTMKLAGQVANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHKVV 448
                  M L   +    L+ L+DSG++ NF+S  + S L L  TP  T  +++ +G  + 
Sbjct: 751  VRTPNAMLLPVSINGHRLVALVDSGSTTNFMSVGLMSRLQLPSTPHPTIKVQVANGDNIP 810

Query: 449  TRGICRGIKAKLGSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGEQ 508
             +G+ R +  ++G+ + +ID + L LG  D++LG  +L  LG ++ D   L+M F  G +
Sbjct: 811  CQGMARSVDLRVGTEQFSIDCIGLTLGTFDVILGFEFLRLLGPILWDCDRLSMSFTKGGR 870

Query: 509  VVQLQGMRGKDSYQSNLHSFLSDTHGREQMEWWGPQLQVVEATKKGHEIPQELRAVLADF 568
             +   G+    +                      P   VV +T     +   LR     F
Sbjct: 871  HIIWSGLGAPGAVPPQ------------------PAACVVSSTPTQPLLDDLLR----QF 908

Query: 569  HEVFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGIIRPS 628
              VF +   LPP R   H+I L P   P+ VRPYRYP  QK+E+ERQ + +L  GIIRPS
Sbjct: 909  ELVFAEPQGLPPARPYDHRIHLLPGAAPVAVRPYRYPQLQKDELERQCSAMLAQGIIRPS 968

Query: 629  MSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSKIDLK 688
             S FS+PV+LV+K D SWR C+DYRALN  T  DK+PIP+VDELLDEL+GA  F+K+DL+
Sbjct: 969  TSPFSAPVLLVRKPDNSWRFCIDYRALNAKTSKDKFPIPVVDELLDELHGAHFFTKLDLR 1028

Query: 689  SGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKFVLVF 748
            SGYHQ+R+H  D+ KT FRTH GHYE+LVMPFGL NAPATFQA+MND+ RPYLRK+VLVF
Sbjct: 1029 SGYHQVRMHPADVEKTAFRTHEGHYEFLVMPFGLSNAPATFQALMNDVLRPYLRKYVLVF 1088

Query: 749  FDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGVSVDP 808
            FDDILIYSK+  EH  H+ +VL  L  +     +SKC FG   + YLGH+IS AGV++D 
Sbjct: 1089 FDDILIYSKTWAEHLQHISIVLHALRDHQLHLKRSKCSFGARSVAYLGHVISAAGVAMDA 1148

Query: 809  EKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGEEAKQA 868
             KV+ +  WP P + +G+RGFLGL GYYRKFI+++G +A PLT L ++D FTW ++ + A
Sbjct: 1149 AKVEAVSSWPAPHSARGLRGFLGLAGYYRKFIRDFGVIAAPLTRLLRRDAFTWDDDTQAA 1208

Query: 869  FHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGNLTKS 928
            F +LKT +T+ PVL +P+F+K+F V+CDA+G G GAVL Q   P+A+FS+     +L  +
Sbjct: 1209 FQQLKTALTTGPVLQMPNFEKTFVVDCDASGTGFGAVLHQGAGPVAFFSRPFVTRHLKLA 1268

Query: 929  VYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLGYQFE 988
             YE+EL+ LV  ++HWR YL G+ F V TDH SLK+ L Q++S+  Q  WL+KL G+ FE
Sbjct: 1269 AYERELIGLVQAVRHWRPYLWGRHFAVRTDHYSLKYLLDQRLSTVPQHQWLSKLFGFDFE 1328

Query: 989  VKYKPGQENKAADALSRRGDE-------------SDFFSLVSFPLWDDRKKLLEEIASDP 1035
            V+Y+PG+ N AADALSRR  E             +   S  SF   DD ++     A+ P
Sbjct: 1329 VEYRPGRLNVAADALSRRDAELLQPSAGELGAAAALALSGPSFAFLDDIRR---ATATSP 1385

Query: 1036 YIKNLLQDVQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFL 1095
                L Q +Q    + P + +  G+LL+  R+ +          +   H   + GH G  
Sbjct: 1386 DSSRLCQQLQDGTLTAP-WRLEDGLLLHGSRIYVPNHGDLRHQAILLAH---SAGHEGIQ 1441

Query: 1096 RTYRRLAESLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDF 1155
            +T  RL    Y  G +  V D+VR C TCQR K   + P GLLQP  VP+ VW D+S+DF
Sbjct: 1442 KTLHRLRAEFYVPGDRTLVADWVRTCTTCQRNKTETLQPAGLLQPLQVPSQVWADISMDF 1501

Query: 1156 IIGLPKSKGYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDR 1215
            I GLPK  G   IL VVDR SKY+HFI L HPYTA S+A  F   IVRLHG P+++ SDR
Sbjct: 1502 IEGLPKVGGKSVILTVVDRFSKYAHFIPLGHPYTAASVARAFFDGIVRLHGFPSSIVSDR 1561

Query: 1216 DPIFVSHFWSELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFWV 1275
            DP+F  H W +LFK  G  L+MS+++HP+TDGQ+EV+N+ +  YLRC   D P+ W  W+
Sbjct: 1562 DPVFTGHVWRDLFKCAGVSLRMSTAFHPQTDGQSEVVNKVIAMYLRCVTGDRPRAWVDWL 1621

Query: 1276 PWAEFWYNSTFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVALELSERDEALKQLRT 1335
             WAE+ YN++FH ++  TPFEVVYGR  PPI+ +     +  A    L +RD  L ++R 
Sbjct: 1622 SWAEYCYNTSFHTALRATPFEVVYGRPPPPILPYQAGSARTAAAEELLRDRDNILAEVRQ 1681

Query: 1336 HLQRAQEQMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIED 1395
             L +AQ+    Y +   RD+    G+WV+L+L      S+  R   KL  R+ GPF++ +
Sbjct: 1682 RLVQAQQLSKRYYDAGHRDMELADGDWVWLRLLHRPVQSLEPRAKGKLGPRYAGPFRVLE 1741

Query: 1396 KIGTVAYKLKLPVESRIHPVFHVSLLKRAIGN--YQVQGQLPTDLGIEEATDIYPEAILG 1453
            +IG VAY+L+LP  +R+H VFHV LLKR  G    Q  G  P   G      + P  +  
Sbjct: 1742 RIGKVAYRLELPEGARLHDVFHVGLLKRHKGEPPEQRAGLPPVQNG-----RLLPAPL-- 1794

Query: 1454 TRIIR-QGDSEVHQSLIKWKNRSIDDVTWEDNEVLAGQFPEFCLEDKAVSKEG 1505
             +++R Q        L++W+  S ++ TWE  +   G +P+F LED+  +  G
Sbjct: 1795 -KVLRAQQRRGTWHILVQWQGLSPEEATWEPLDDFRGLYPDFQLEDELFAHAG 1846


>UniRef100_Q9C7H8 Gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score =  931 bits (2405), Expect = 0.0
 Identities = 486/1142 (42%), Positives = 701/1142 (60%), Gaps = 50/1142 (4%)

Query: 354  MDEDGEIVMLEEEAEEIEEEETVECKLM---GVLGCMGEHQTQTMKLAGQVANVELLILI 410
            MD D E     E+A E+  ++  E K M    V    G    +TM + G V   +L ILI
Sbjct: 329  MDVDEEF----EDAVEVLSDDDHEQKPMPQISVNAVSGISGYKTMGVKGTVDKRDLFILI 384

Query: 411  DSGASHNFISPKITSALGLVITPITTRSIKLGDGHKVVTRGICRGIKAKLGSIEITIDAL 470
            DSG++HNFI   + + LG  +       + + DG K+   G  +G   KL S     D L
Sbjct: 385  DSGSTHNFIDSTVAAKLGCHVESAGLTKVAVADGRKLNVDGQIKGFTWKLQSTTFQSDIL 444

Query: 471  VLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGEQVVQLQGMRGKDSYQSNLHSF-- 528
            ++ L G+D+VLGV WL TLG++  ++K L MQF Y  Q V L G+          H    
Sbjct: 445  LIPLQGVDMVLGVQWLETLGRISWEFKKLEMQFFYKNQRVWLHGIITGSVRDIKAHKLQK 504

Query: 529  -------LSDTHGREQMEWWGPQLQVVEATKKGHEIPQELRAVLADFHEVFTKKIQLPPV 581
                   L+    RE +     ++  + A          ++ ++ +F +VF +   LPP 
Sbjct: 505  TQADQIQLAMVCVREVVSDEEQEIGSISALTSDVVEESVVQNIVEEFPDVFAEPTDLPPF 564

Query: 582  RSRV-HQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGIIRPSMSSFSSPVILVK 640
            R +  H+I L     P+N RPYRY  HQK+EI++ V +++++G I+ S S F+SPV+LVK
Sbjct: 565  REKHDHKIKLLEGANPVNQRPYRYVVHQKDEIDKIVQDMIKSGTIQVSSSPFASPVVLVK 624

Query: 641  KKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSKIDLKSGYHQIRVHEED 700
            KKD +WR+CVDY  LN  T+ D++ IP++++L+DEL G+V+FSKIDL++GYHQ+R+  +D
Sbjct: 625  KKDGTWRLCVDYTELNGMTVKDRFLIPLIEDLMDELGGSVVFSKIDLRAGYHQVRMDPDD 684

Query: 701  IPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKFVLVFFDDILIYSKSLL 760
            I KT F+THNGH+EYLVM FGL NAPATFQ++MN +FR +LRKFVLVFFDDILIYS S+ 
Sbjct: 685  IQKTAFKTHNGHFEYLVMLFGLTNAPATFQSLMNSVFRDFLRKFVLVFFDDILIYSSSIE 744

Query: 761  EHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGVSVDPEKVQCIVEWPEP 820
            EH++HL+LV  V+  +   A  SK        ++LGH IS   +  DP K+Q + EWP P
Sbjct: 745  EHKEHLRLVFEVMRLHKLFAKGSK--------EHLGHFISAREIETDPAKIQAVKEWPTP 796

Query: 821  KNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGEEAKQAFHKLKTVMTSSP 880
              VK VRGFLG  GYYR+F++N+G +A PL  LTK D F W  EA+ AF  LK V+ ++P
Sbjct: 797  TTVKQVRGFLGFAGYYRRFVRNFGVIAGPLHALTKTDGFCWSLEAQSAFDTLKAVLCNAP 856

Query: 881  VLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGNLTKSVYEKELMALVLC 940
            VLALP FDK F VE DA G+GI AVLMQ+  P+AY S+ L    L  S+YEKEL+A +  
Sbjct: 857  VLALPVFDKQFMVETDACGQGIRAVLMQKGHPLAYISRQLKGKQLHLSIYEKELLAFIFA 916

Query: 941  IQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLGYQFEVKYKPGQENKAA 1000
            ++ WRHYLL   F + TD +SLK+ L+Q++++P QQ WL KLL + +E++Y+ G+EN  A
Sbjct: 917  VRKWRHYLLPSHFIIKTDQRSLKYLLEQRLNTPVQQQWLPKLLEFDYEIQYRQGKENLVA 976

Query: 1001 DALSRRGDESDFFSLVSFPLWDDRKKLLEEIASDPYIKNLLQDVQQDPQSKPGFSVLQGV 1060
            DALSR          +S    D  K++     SD  +K+++  +QQ P +K  +S  Q +
Sbjct: 977  DALSRVEGSEVLHMALSIVECDFLKEIQVAYESDGVLKDIISALQQHPDAKKHYSWSQDI 1036

Query: 1061 LLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLAESLYWVGMQRTVRDFVRA 1120
            L  + ++V+         LLQ  H S  GG SG   +++R+    YW GM + ++ F+R+
Sbjct: 1037 LRRKSKIVVPNDVEITNKLLQWLHCSGMGGRSGRDASHQRVKSLFYWKGMVKDIQAFIRS 1096

Query: 1121 CDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKSKGYEAILVVVDRLSKYSH 1180
            C TCQ+ K    +  GLLQP P+P+ +W D+S+DFI GLP S G   I+VVVDRLSK +H
Sbjct: 1097 CGTCQQCKSDNAAYPGLLQPLPIPDKIWCDVSMDFIEGLPNSGGKSVIMVVVDRLSKAAH 1156

Query: 1181 FILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSHFWSELFKLQGTKLKMSSS 1240
            F+ L HPY+A ++A+ F+  + + HG P ++ SDRD +F S FW E FKLQG +L+MSS+
Sbjct: 1157 FVALAHPYSALTVAQAFLDNVYKHHGCPTSIVSDRDVLFTSDFWKEFFKLQGVELRMSSA 1216

Query: 1241 YHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFWYNSTFHCSIGQTPFEVVYG 1300
            YHP++DGQTEV+NRCLE+YLRC     P  W+ W+P AE+WYN+ +H S   TPFE+VYG
Sbjct: 1217 YHPQSDGQTEVVNRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYHSSSQMTPFELVYG 1276

Query: 1301 RKAPPIIRFLTNETKVVAVALELSERDEALKQLRTHLQRAQEQMASYANKKRRDLSFDIG 1360
            +  P  + +L  ++KV  VA  L ER+  L  L+ HL RAQ +M  +A++ R + +FDIG
Sbjct: 1277 QAPPIHLPYLPGKSKVAVVARSLQERENMLLFLKFHLMRAQHRMKQFADQHRTERTFDIG 1336

Query: 1361 EWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVAYKLKLPVESRIHPVFHVSL 1420
            ++V++KL+P+RQ SVV R+NQKL+ +++GP++I +K G V                    
Sbjct: 1337 DFVYVKLQPYRQQSVVLRVNQKLSPKYFGPYKIIEKCGEV-------------------- 1376

Query: 1421 LKRAIGNYQVQGQLPTDLGIEEATDIYPEAILGTRIIRQGDSEVHQSLIKWKNRSIDDVT 1480
                +GN     QLP+ L   +  +  PE IL  +++++        L+KW    +++ T
Sbjct: 1377 ---MVGNVTTSTQLPSVL--PDIFEKAPEYILERKLVKRQGRAATMVLVKWIGEPVEEAT 1431

Query: 1481 WE 1482
            W+
Sbjct: 1432 WK 1433


>UniRef100_Q7XSK7 OSJNBa0059D20.8 protein [Oryza sativa]
          Length = 1463

 Score =  930 bits (2403), Expect = 0.0
 Identities = 504/1177 (42%), Positives = 689/1177 (57%), Gaps = 53/1177 (4%)

Query: 341  RAMRVLILGDGETMDEDGEIVMLEEEAEEIEEEETVECKLMGVLGCMGEHQTQTMKLAGQ 400
            R  R L   DG  +D+    V +E +A     +   E  +  +    G     T++L   
Sbjct: 293  RFCRRLFFVDGVEIDD----VAIEGDAAAAAGD--TEAPVFSLHAVAGVPIADTIQLQVT 346

Query: 401  VANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHKVVTRGICRGIKAKL 460
            V +  LL L+D G++H+FI  +     GL I      +  + +G +V   G+ R     +
Sbjct: 347  VGDASLLALLDGGSTHSFIGEEAARRAGLPIQSSPRMTAIVANGERVACPGVIRDAAFTI 406

Query: 461  GSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGEQVVQLQGMRGKDS 520
                   D  V+ L G D+VLG  WL TLG ++ D+   +M F    Q    +G+     
Sbjct: 407  NGSTFHTDLFVMPLAGFDVVLGTRWLGTLGPIVWDFTSRSMAFQRDGQRFAWKGVAST-- 464

Query: 521  YQSNLHSFLSDTHGREQMEWWGPQLQVVEATKKGHEIPQELRAVLADFHEVFTKKIQLPP 580
                     S TH R      G  L                  +L  + +VF +   LPP
Sbjct: 465  ---------STTHLRTLAAASGTLLD----------------ELLVAYEDVFGEPTGLPP 499

Query: 581  VRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGIIRPSMSSFSSPVILVK 640
             R R H I L P   P+ VRPYRYP   K+E+ERQ   ++E G++R S S FSSPV+LVK
Sbjct: 500  PRGRDHAIVLKPSSAPVAVRPYRYPAAHKDELERQCAAMIEQGVVRRSDSPFSSPVLLVK 559

Query: 641  KKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSKIDLKSGYHQIRVHEED 700
            K D SWR CVDYRALN  T+ D +PIP+VDEL    +GA  F+K+DL+SGYHQ+R+  ED
Sbjct: 560  KADGSWRFCVDYRALNALTVKDAFPIPVVDEL----HGARFFTKLDLRSGYHQVRMRPED 615

Query: 701  IPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKFVLVFFDDILIYSKSLL 760
            + KT FRTH+G YE+LVMPFGL NAPATFQA+MND+ RP+LR+FVLVFFDDILIYS++  
Sbjct: 616  VHKTAFRTHDGLYEFLVMPFGLCNAPATFQALMNDVLRPFLRRFVLVFFDDILIYSETWT 675

Query: 761  EHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGVSVDPEKVQCIVEWPEP 820
            +H  HL+ VL+VL  +     +SKC FG   + YLGH+IS AGV++DP KVQ I EW  P
Sbjct: 676  DHLRHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVISEAGVAMDPAKVQAIHEWLVP 735

Query: 821  KNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGEEAKQAFHKLKTVMTSSP 880
            ++ + VR FLGL GYYRKF+ NYG +A PLT LTKKD F+W E+   AF  LK  +TS+P
Sbjct: 736  RSARAVRSFLGLAGYYRKFVHNYGTIAAPLTALTKKDGFSWTEDTAAAFDALKAAVTSAP 795

Query: 881  VLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGNLTKSVYEKELMALVLC 940
            VLA+PDF K F VE DA+  G GAVL+Q   P+A+FS+ +   +   + YE+EL+ LV  
Sbjct: 796  VLAMPDFAKPFTVEGDASTHGFGAVLVQDGHPVAFFSRPVVLRHRALAAYERELIGLVHA 855

Query: 941  IQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLGYQFEVKYKPGQENKAA 1000
            ++HWR YL G+ F V TDH SLK+ L Q++++  Q  W+ KLLG+ F V+YKPG  N  A
Sbjct: 856  VRHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFAVEYKPGAANTVA 915

Query: 1001 DALSRRGDESDFFSLVSFPLWDDRKKLLEEIASDPYIKNLLQDVQQDPQSKPGFSVLQGV 1060
            DALSRR  E      +S P +D   KL +    DP +  L  +V    ++ P ++++  +
Sbjct: 916  DALSRRDTEEGAILALSAPRFDFISKLHDAQRQDPALTALRDEVSAGTRTGP-WALVDDL 974

Query: 1061 LLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLAESLYWVGMQRTVRDFVRA 1120
            L Y   L + P SP    +++  H     GH G  RT  RL    +   M++ V+D+VR+
Sbjct: 975  LQYNSWLYIPPASPLAREIIEATH---EDGHEGVKRTMHRLRREFHIPNMKQLVQDWVRS 1031

Query: 1121 CDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKSKGYEAILVVVDRLSKYSH 1180
            C  CQR K   +SP GLL P PVP  VW D++LDFI  LP+ +G   IL VVDR SKY H
Sbjct: 1032 CAVCQRYKSEHLSPAGLLLPLPVPQGVWTDIALDFIEALPRVRGKSVILTVVDRFSKYCH 1091

Query: 1181 FILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSHFWSELFKLQGTKLKMSSS 1240
            FI L HPY+A+S+A+ F  EIV LHG+P ++ SDRDPIF S FW EL +L GTKL M+++
Sbjct: 1092 FIPLAHPYSAESVAQAFFAEIVHLHGVPQSMVSDRDPIFTSTFWRELMRLMGTKLHMTTA 1151

Query: 1241 YHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFWYNSTFHCSIGQTPFEVVYG 1300
            +HP++DGQ+E  NR +  YLRC   D P+ W  W+PWAEF +N+ +  S+  TPF VVYG
Sbjct: 1152 FHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSSLRDTPFRVVYG 1211

Query: 1301 RKAPPIIRFLTNETKVVAVALELSERDEALKQLRTHLQRAQEQMASYANKKRRDLSFDIG 1360
            R  P I  +   +T+V AVA  + ER E L  +R  L++AQ     + +K  R +++ +G
Sbjct: 1212 RDPPSIRSYEAGDTRVAAVAKSMEERAEFLFDIRYRLEQAQAVQKLHYDKHHRHVAYQVG 1271

Query: 1361 EWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVAYKLKLPVESRIHPVFHVSL 1420
            +W  L+LR     S+ +    KL  RFYGP++I + I  VA +L+LP  +R+H VFH+ L
Sbjct: 1272 DWALLRLRQRPTTSLPQSGTGKLKPRFYGPYRITELINDVAVRLELPAGARLHDVFHIGL 1331

Query: 1421 LKRAIGNYQVQGQLPTDLGIEE-ATDIYPEAILGTRIIRQGDSEVHQSLIKWKNRSIDDV 1479
            LK+  G     G  P    +   A    PE  +  R+ R     V Q+L++WK  S    
Sbjct: 1332 LKKFHG--PPPGAPPALPPLHHGAIAPEPERAVRFRLAR----GVRQALVQWKGESPASA 1385

Query: 1480 TWEDNEVLAGQFPEFCLEDKAVSKEGGIERDSNTKWG 1516
            TWED EVL  ++P   LED+   +EGG     +  WG
Sbjct: 1386 TWEDIEVLRAKYPALQLEDELSLEEGG-----DVMWG 1417


>UniRef100_Q7XJX3 OSJNBa0004L19.16 protein [Oryza sativa]
          Length = 1586

 Score =  899 bits (2322), Expect = 0.0
 Identities = 471/1173 (40%), Positives = 689/1173 (58%), Gaps = 21/1173 (1%)

Query: 336  HKCP-ERAMRVLILGDGETMDE--DGEIV------MLEEEAEEIEEEETVECKLMGVLGC 386
            H+C  ++A+  L++   E  DE  +GE+        LE+E    ++E   E   +     
Sbjct: 419  HQCKVKKALNALLMEGEEGKDEGEEGELTGNQEDCKLEKEEAPPDDENQEELMFVSHNAV 478

Query: 387  MGEHQTQTMKLAGQVANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHK 446
             G  +  T  +  Q+     + L+DSG++  F+           +     + + +  G +
Sbjct: 479  YGTTRPDTFSVIIQINGRRAVGLVDSGSTSTFMDQDYAVRNHCPLVSTDAKKVVVAGGGE 538

Query: 447  VVTRGICRGIKAKLGSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYG 506
            + +      +  ++     +    ++ L G D++LG  W+     + +D K   +    G
Sbjct: 539  LKSEVQVPELVYQIQGETFSNKFNIIPLKGYDVILGADWIYKYSPITLDLKKRELGITKG 598

Query: 507  EQVVQLQGMRGKDSYQSNLHSFLSDTHGREQMEWWGP----QLQVVEATKKGHEIPQELR 562
            E+ V +Q     D  +   H ++      + +   G     Q+  V+  +  HEIP++++
Sbjct: 599  EKTVVIQ-----DFTRPGKHLWVDSKKVDQILRKGGLGCLFQITRVKEEETSHEIPEDIK 653

Query: 563  AVLADFHEVFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEA 622
             +L +F  V      LPP R+  H ITL     P N+RPYR PH+QKE +E+ + EL+E+
Sbjct: 654  EILQEFPAVLKDPKGLPPRRNCDHVITLKSGAEPPNLRPYRVPHYQKEAMEKIIAELIES 713

Query: 623  GIIRPSMSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIF 682
              I+ S   +SSP ++V+KKD SWR+CVDYR LN  T+ +K+P+PI+++LLDELNGA +F
Sbjct: 714  KEIQVSDIPYSSPAVMVRKKDGSWRLCVDYRQLNAQTVKNKFPMPIIEDLLDELNGAKVF 773

Query: 683  SKIDLKSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLR 742
            SK+DL+SGYHQIR+  +DIPKT FRTH GHYEY VMPFGL NAP TFQ++MN +  P+LR
Sbjct: 774  SKLDLRSGYHQIRMATQDIPKTAFRTHLGHYEYQVMPFGLTNAPTTFQSLMNQVLAPFLR 833

Query: 743  KFVLVFFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGA 802
            K+VLVFFDDILIYSK   EH++H++ V+ VL  N  V    KC FG   + YLGHIIS  
Sbjct: 834  KYVLVFFDDILIYSKDWAEHKEHIRQVMKVLEENKLVVKLKKCAFGLPSVTYLGHIISQD 893

Query: 803  GVSVDPEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWG 862
            GV+ DP+KV+ I  +P PK+V  +R FLG+TGYYR+FIKNYG + +PL ++ KK+ F W 
Sbjct: 894  GVATDPKKVEKIATYPTPKSVTDLRKFLGMTGYYRRFIKNYGIVCRPLHDMLKKEGFQWE 953

Query: 863  EEAKQAFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSN 922
             E  +AF  LKT M +SPVL+LPDF K F +E DA G GIGAVLMQ  +P+AYFSK L  
Sbjct: 954  REQTEAFETLKTHMCTSPVLSLPDFTKEFVIEADACGNGIGAVLMQSGRPLAYFSKTLGP 1013

Query: 923  GNLTKSVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKL 982
                +S+YEKE MA++  ++ WRHY+LG    + TD +SLK  + Q++    Q   L KL
Sbjct: 1014 KAAAQSIYEKEAMAILEALKKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLKL 1073

Query: 983  LGYQFEVKYKPGQENKAADALSRRGDESDFFSLVS-FPLWDDRKKLLEEIASDPYIKNLL 1041
            + Y + ++YK G+EN  ADALSR        ++ +  P W   + +      D     +L
Sbjct: 1074 MEYDYSIEYKAGKENLVADALSRIPPAEQCQAITTVIPEW--VRDIQRSYEGDVQAHKIL 1131

Query: 1042 QDVQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRL 1101
              +  +  +   +S   G+L Y+GR+ +   +     L++ YH S  GGHSG   TY R+
Sbjct: 1132 SLIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRI 1191

Query: 1102 AESLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPK 1161
                YW G+++ V  F+R C  CQ  K   +   GLL P  VP+  W  +++DF+ GLPK
Sbjct: 1192 KSLFYWPGLKKAVEGFIRECPICQVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVEGLPK 1251

Query: 1162 SKGYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVS 1221
            S G + ILVVVDRL+KY+HFI + HPYT + + E+F+  I RLHG+P  + +DRD IF S
Sbjct: 1252 SNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTS 1311

Query: 1222 HFWSELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFW 1281
              + E+FK    +LK S+SYHP+TDGQTE +N+CLESYLR      P  W  W+  AE+W
Sbjct: 1312 QLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWW 1371

Query: 1282 YNSTFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVALELSERDEALKQLRTHLQRAQ 1341
            YN+T+H SI  TPF+ +YG   P I  F           + + ++D  +++L+  L  AQ
Sbjct: 1372 YNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVTIEQKDAIIQKLKYSLTEAQ 1431

Query: 1342 EQMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVA 1401
             ++  YA++ R + +  +G+ V+LKL+P+RQ +   R + KL ++FYGPF+I +K+G VA
Sbjct: 1432 RRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVA 1491

Query: 1402 YKLKLPVESRIHPVFHVSLLKRAIGNYQVQGQLPTDLGIEEATDIYPEAILGTRIIRQGD 1461
            YKL+LP  S IHPVFHVS LK+ IG+  V       +G +      P A+L  R+I +G 
Sbjct: 1492 YKLQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGG 1551

Query: 1462 SEVHQSLIKWKNRSIDDVTWEDNEVLAGQFPEF 1494
              V Q L+ W N S  + TWED  ++   FP F
Sbjct: 1552 VAVTQWLVLWHNLSPSEATWEDASMIQSMFPSF 1584


>UniRef100_Q8RUU3 Putative gag-pol polyprotein [Oryza sativa]
          Length = 1338

 Score =  893 bits (2307), Expect = 0.0
 Identities = 467/1138 (41%), Positives = 674/1138 (59%), Gaps = 74/1138 (6%)

Query: 388  GEHQTQTMKLAGQVANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHKV 447
            G   +  M +   + + +L  LIDSG  H F+S    + +G    P    ++ + +G KV
Sbjct: 255  GVRASDAMHITAHLGDTDLYTLIDSGLMHTFLSQDTAARVGRAPQPRMGLNVTVANGDKV 314

Query: 448  VTRGICRGIKAKLGSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGE 507
               G+   +  ++   E   D                        + D+ +LTM F +  
Sbjct: 315  ACPGVFPDMPLQIAGEEFATD------------------------VYDFTVLTMSFWHR- 349

Query: 508  QVVQLQGMRGKDSYQSNLHSFLSDTHGREQMEWWGPQLQVVEATKKGHEIPQELRAVLAD 567
              V L G+ G               H R +     P                 L ++L +
Sbjct: 350  --VTLHGLPG---------------HQRPRALACAPAAL--------------LDSLLEE 378

Query: 568  FHEVFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGIIRP 627
            F +VFT+   LPP R R H+I L P   P+ VRPYRYP   K+E+ERQ   + E G+I  
Sbjct: 379  FADVFTEPTGLPPARDRSHRIQLLPGTAPVAVRPYRYPVRHKDELERQCRVMEENGLIHR 438

Query: 628  SMSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSKIDL 687
            S S+FSSPV+LVKK D SWR CV+YRALN+ T+ DKYPIP+VDELLDEL+GA IFSK+DL
Sbjct: 439  STSAFSSPVLLVKKADGSWRFCVNYRALNERTVKDKYPIPVVDELLDELHGAAIFSKLDL 498

Query: 688  KSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKFVLV 747
            +SGYHQ+R+H +DI KT FRTH+G YE+LV+PFGL NA ATFQ++MND+ RP+LR+FVLV
Sbjct: 499  RSGYHQVRMHPDDIDKTAFRTHDGLYEFLVIPFGLTNALATFQSLMNDVLRPFLRRFVLV 558

Query: 748  FFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGVSVD 807
            FFDDIL+YS +   H  HL+ V T L +       +KC FG   + YLGHIIS  G ++D
Sbjct: 559  FFDDILVYSPTWTSHLQHLRTVFTALWAAQLFVKHTKCSFGDPSVAYLGHIISQHGFAMD 618

Query: 808  PEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGEEAKQ 867
              K+Q + EWP P++ K +RGFLGL  YYRKFI+++G +A PLT+L +KD+F W      
Sbjct: 619  AAKIQAVAEWPRPRSPKELRGFLGLASYYRKFIQDFGSVAAPLTQLLRKDSFAWAPATDD 678

Query: 868  AFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGNLTK 927
            AF +LK  +T++PVL+LPDF++ F VECDA+G G GAVL Q   PIAYFS+ ++  +   
Sbjct: 679  AFQRLKLALTTTPVLSLPDFNRPFVVECDASGTGFGAVLHQGEDPIAYFSRPIATRHHAL 738

Query: 928  SVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLGYQF 987
            + YE+EL++LV  ++HWR YL G+ F V TDH SLK  L Q++S+  Q  W++KLLG+ F
Sbjct: 739  AAYERELISLVQAVRHWRPYLWGRQFIVKTDHYSLKFLLDQRLSTIPQHHWVSKLLGFDF 798

Query: 988  EVKYKPGQENKAADALSRRGDESDFFSLVSFPLWDDRKKLLEEIASDPYIKNLLQDVQQD 1047
             V+YKPG++N AADALS R        ++S P +D  K +     +DP ++ L  ++   
Sbjct: 799  VVEYKPGKQNAAADALSCRAAPDSQAFVLSTPTFDLLKDIRTAGDTDPALQALRDEINSG 858

Query: 1048 PQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLAESLYW 1107
             ++ P ++V+ G++ Y+ R+ + P SP +  ++   H     GH G  +T  RL    + 
Sbjct: 859  TRTTP-WAVIDGLVTYKRRIYIPPGSPWVSVVVAAAHDD---GHEGIQKTLHRLRRDFHT 914

Query: 1108 VGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKSKGYEA 1167
               +R V D ++ C TCQR K   + P GLL P PVP+A+W D+++DF+ GLP+  G   
Sbjct: 915  PDDRRVVHDHIQGCLTCQRNKTDHLHPAGLLLPLPVPSAIWSDVAMDFVEGLPRVGGKSV 974

Query: 1168 ILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSHFWSEL 1227
            IL VVDR SKY+H I L H YTA+++A  F  +IVRLHG+P ++ SDRDP+F S FW+ L
Sbjct: 975  ILTVVDRFSKYAHLIALAHSYTAETVARAFFVDIVRLHGVPESIVSDRDPVFTSAFWTAL 1034

Query: 1228 FKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFWYNSTFH 1287
            F    TKL  S+++HP++DGQ++ +N+ +   LRC   D  + W  W+PWAE+ YN++FH
Sbjct: 1035 FTATCTKLHRSTAFHPQSDGQSKAVNKAIAMCLRCMTGDRSRQWLRWLPWAEYIYNTSFH 1094

Query: 1288 CSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVALELSERDEALKQLRTHLQRAQEQMASY 1347
             ++  TPF++VYGR  P I  +  +E +V AVA  + ERD  L  +R  L++AQ+    Y
Sbjct: 1095 AALRDTPFKLVYGRDPPSIRAYDASELRVAAVAQSIEERDAFLADVRLRLEQAQQYAKRY 1154

Query: 1348 ANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVAYKLKLP 1407
             ++K R++SF++G WV+L++R     S+ + +  KL  RFYGP+++   I  VAY+L LP
Sbjct: 1155 YDQKHREVSFEVGAWVWLRVRHRVPASLPEAVKGKLRPRFYGPYRVVAVINEVAYRLALP 1214

Query: 1408 VESRIHPVFHVSLLKRAIGNYQVQGQLPTDLGIEE--ATDIYPEAILGTRIIRQGDSEVH 1465
              +R+H VFHV LLK  +G   V    P  L   +  A    P  +L  R+ R     V 
Sbjct: 1215 PGTRLHDVFHVGLLKPFVG---VSPSAPLALPPIQHGAAQPVPRQVLRARLAR----GVR 1267

Query: 1466 QSLIKWKNRSIDDVTWEDNEVLAGQFPEFCLEDKAVSKEGGIERDSNTKWGMGLGKPK 1523
            Q L++W+       +WED +    ++P F L D+ +     IE   +  WG+   + K
Sbjct: 1268 QLLVQWEGLPASATSWEDLDDFRNRYPSFQLADELL-----IEGGRDVMWGIPFRRRK 1320


>UniRef100_Q7XEK0 Hypothetical protein [Oryza sativa]
          Length = 1611

 Score =  888 bits (2295), Expect = 0.0
 Identities = 477/1175 (40%), Positives = 709/1175 (59%), Gaps = 22/1175 (1%)

Query: 336  HKCP-ERAMRVLILGDGETMDEDGEIVMLEE-----EAEEIEEE-ETVECKLMGVL--GC 386
            H+C  ++A+  L++ + E+++ + + V  EE     + E++ E+ E V+ +LM +     
Sbjct: 441  HQCKVKQAIHALLVENEESVEVEEDSVEEEEIKGEKQGEKLPEQTENVQEELMSISQSAV 500

Query: 387  MGEHQTQTMKLAGQVANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHK 446
             G  +  T  +  +V   + + L+DSG++  F+  K        +     R + +  G +
Sbjct: 501  YGLTRPDTFSVMIKVNGKKAVGLVDSGSTTTFMDSKFAIKSQCTLENTKMRKVIVAGGGE 560

Query: 447  VVTRGICRGIKAKLGSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYG 506
            + +  I  G++ ++     T    +L L   D++LG  W+     + +D +   M+   G
Sbjct: 561  LKSELIVPGMEYEIQGESFTNSFNLLSLERYDIILGADWIFKYSPITLDLRKREMKITKG 620

Query: 507  EQVVQLQGMRGKDSYQSNLHSFLSDTHGREQMEWWGPQLQVVEATKKGHE---IPQELRA 563
             + +++Q       Y    +  +     +  +   G  +Q+   T + +    IP++++ 
Sbjct: 621  GRELEIQDFTKPGKYFQVSNKKMGKMIKKGAL---GCVIQINAITDQSNVEVGIPKDIQI 677

Query: 564  VLADFHEVFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAG 623
            VL  F +V  +   LPP RS  H I L     P N+RPYR PH QK  +E  +TEL    
Sbjct: 678  VLQSFPKVLKEPKGLPPRRSCDHVINLKVGSEPPNLRPYRVPHFQKGAMEDIITELFRTQ 737

Query: 624  IIRPSMSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFS 683
             IR S S + SP ++V+KKD SWR+CVDYR LN  TI +K+P+PI+++LLDEL+GA +FS
Sbjct: 738  EIRISDSPYVSPAVMVRKKDGSWRLCVDYRQLNAQTIKNKFPMPIIEDLLDELHGAKVFS 797

Query: 684  KIDLKSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRK 743
            K+DL+SGYHQIR+ E DIPKT FRTH GHYEY VMPFGL NAPATFQA+MN +  P+LRK
Sbjct: 798  KLDLRSGYHQIRMAEGDIPKTAFRTHLGHYEYNVMPFGLTNAPATFQALMNQVLAPFLRK 857

Query: 744  FVLVFFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAG 803
            FVLVFF DILIYSK+  EH +H+KLV+  L +N  V    KC+FG  ++ YLGHIIS  G
Sbjct: 858  FVLVFFADILIYSKTQSEHLEHIKLVMQALSANQLVVRLKKCEFGLDRVSYLGHIISSEG 917

Query: 804  VSVDPEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGE 863
            VS DP+K+  I     PKNV  VR FLG+ GYYR+FIK YG + +PL +L KKD F WG+
Sbjct: 918  VSTDPKKISDIKNRKPPKNVTEVREFLGMAGYYRRFIKGYGVICRPLHDLLKKDGFKWGD 977

Query: 864  EAKQAFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNG 923
              ++AF  LK  M +SPVLALPDF + F +E DA G GIGAVLMQ+ +P+AYFSKAL   
Sbjct: 978  TQQEAFELLKEKMCNSPVLALPDFSQPFVIETDACGIGIGAVLMQKGRPLAYFSKALGPK 1037

Query: 924  NLTKSVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLL 983
               +SVYEKE +A++  ++ WRHY+LG +  + TD +SLK  + Q++    Q   L KL+
Sbjct: 1038 AAAQSVYEKEAIAILEALKKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLKLM 1097

Query: 984  GYQFEVKYKPGQENKAADALSRR---GDESDFFSLVSFPLW-DDRKKLLEEIASDPYIKN 1039
             + + ++YK G+EN  ADALSR     +E      V  P W  D K+  EE   D +   
Sbjct: 1098 EFDYVIEYKSGKENLVADALSRSPNLKEEQCLPITVVVPEWVQDIKRSYEE---DIFAHK 1154

Query: 1040 LLQDVQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYR 1099
            +L  ++ D   +  + +  G+L Y+GR+ +  T+     LL+ YH S  GGHSG   TY 
Sbjct: 1155 ILSLIETDGDPERHYKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYH 1214

Query: 1100 RLAESLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGL 1159
            R+ +  YW G+++ V  ++R C TCQ  K   +   GLL P  VP+  W  +++DFI GL
Sbjct: 1215 RIKQLFYWPGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGL 1274

Query: 1160 PKSKGYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIF 1219
            PKS+G + ILVVVDRL+KY+HF+ L HPYT + + ++F+  I +LHG+P  + +DRD +F
Sbjct: 1275 PKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVF 1334

Query: 1220 VSHFWSELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAE 1279
             S+F+ E+FK Q  KL+ S+++HP+TDGQTE +N+CLESYLR      P+ W  W+  AE
Sbjct: 1335 TSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAE 1394

Query: 1280 FWYNSTFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVALELSERDEALKQLRTHLQR 1339
            +WYN+T+H SI  TPF+ +YG   P I  F           + L ++   L++L++ +  
Sbjct: 1395 WWYNTTYHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARVTLEDKALILQKLKSSIGE 1454

Query: 1340 AQEQMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGT 1399
            AQ ++  YA+K R + + ++G+ V+LKL+P+RQ ++  R + KL +++YGPF++ +K+G 
Sbjct: 1455 AQRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGA 1514

Query: 1400 VAYKLKLPVESRIHPVFHVSLLKRAIGNYQVQGQLPTDLGIEEATDIYPEAILGTRIIRQ 1459
            VAYKL+LP  + IHPVFHVS LK+ +G   +       +G +      P A+L  R+I +
Sbjct: 1515 VAYKLQLPDGAGIHPVFHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPR 1574

Query: 1460 GDSEVHQSLIKWKNRSIDDVTWEDNEVLAGQFPEF 1494
             +  V Q LI W+N +  + TWED   +   FP F
Sbjct: 1575 HNEPVTQWLILWENLTPAEATWEDASYIQAAFPNF 1609


>UniRef100_Q8SA91 Putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  881 bits (2276), Expect = 0.0
 Identities = 484/1133 (42%), Positives = 675/1133 (58%), Gaps = 32/1133 (2%)

Query: 388  GEHQTQTMKLAGQVANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHKV 447
            G    QT+KL G + N  LLILIDSG+SH F++ ++   L  V +  +T  +++ +G  V
Sbjct: 448  GSTGRQTLKLNGSIQNHPLLILIDSGSSHTFLNDQLRPHLQGVTSMASTLQVQVANGAMV 507

Query: 448  VTRGICRGIKAKLGSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGE 507
                     + ++ +   T D   L L   D+V+G+ WL +   + +DW    +   Y  
Sbjct: 508  TCHYKLLQAQWQIQNCSFTSDVSFLPLPYYDMVVGMDWLESFSPMRVDWAQKWLIIPYQG 567

Query: 508  QVVQLQGMRGKDSYQSNLHSFLSDTHGREQMEWWGPQLQVVEATKKGHEIPQE---LRAV 564
              V LQG         N     +DT           +L  +E+       P     ++A+
Sbjct: 568  SSVLLQG---------NTAGVPADTV---------IELLFMESASSVSSSPDSHPAIQAL 609

Query: 565  LADFHEVFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGI 624
            L  F  VF +   LPP R   H I L     P++VRPYRYP   K++IE+QV E+L  G+
Sbjct: 610  LQQFSSVFAEPQGLPPSRDCDHAIPLVEGAQPVSVRPYRYPPALKDKIEKQVQEMLHQGV 669

Query: 625  IRPSMSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSK 684
            I+ S SSF+SPV+LVKKKD +WR CVDYR LN  T+  KYP+P+ D+L+DEL  +  FSK
Sbjct: 670  IQKSNSSFASPVLLVKKKDMTWRFCVDYRYLNALTLKSKYPVPVFDQLIDELAHSKWFSK 729

Query: 685  IDLKSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKF 744
            +DL++GYHQI +   +  KT F+TH GHYE+ VM FGL  AP TF + MN+  +P LRK 
Sbjct: 730  LDLRAGYHQILLKPGEEYKTAFQTHVGHYEFRVMAFGLTGAPNTFLSAMNETLKPVLRKC 789

Query: 745  VLVFFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGV 804
             LVFFDDILIYSKS  EH  HL+ VL +LLS+++    SKC+F      YLGHIIS  GV
Sbjct: 790  ALVFFDDILIYSKSFEEHLLHLQKVLQLLLSDNWKVKLSKCEFAKTNTAYLGHIISEQGV 849

Query: 805  SVDPEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDN-FTWGE 863
            S  P K+Q I  W  P + K +R FLGL G+YRKF+K++G +++PL +L KK   F W  
Sbjct: 850  STYPSKIQAISSWAVPTSAKELRCFLGLAGFYRKFVKHFGIISRPLFDLLKKHTLFVWTV 909

Query: 864  EAKQAFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNG 923
            +  +AF  LK  + ++PVLALPDF + F +  DA+  G+GAVLMQ   P+A+ SKAL   
Sbjct: 910  DHSKAFEVLKQALVTAPVLALPDFSQPFCIHTDASYYGVGAVLMQSGHPLAFLSKALGPK 969

Query: 924  NLTKSVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLL 983
            N   S YEKE MA++L I  WR YL    F +YTDH+SL    +Q++ +  QQ    KL 
Sbjct: 970  NQGLSTYEKEYMAIILAIAQWRSYLQLAEFIIYTDHRSLAQLNEQRLHTIWQQKMYTKLA 1029

Query: 984  GYQFEVKYKPGQENKAADALSRRGDESDFFSLVSFPLWDDRKKLLEEIASDPYIKNLLQD 1043
            G Q+++ Y+ G +N AADALSR+  E      +S  +    ++++E    DP  K LL  
Sbjct: 1030 GLQYKIVYRKGVDNGAADALSRKVQEDSHCCAISHSVPTWLQEVVEGYDKDPTSKQLLAQ 1089

Query: 1044 VQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLAE 1103
            +  +   K  FS+ QG++ ++ R+ L         +LQ  H +  GGHSG   TY ++ +
Sbjct: 1090 LILNSADKAPFSLHQGIIRHKNRIWLGGNLQLQQKVLQAMHDTAVGGHSGAPATYHKVKQ 1149

Query: 1104 SLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKSK 1163
              YW GM+  V  +V++C  CQ+ K       GLLQP  VP   W  +SLDFI GLP+S 
Sbjct: 1150 MFYWPGMRADVLQYVQSCTVCQQSKPDRAKYPGLLQPLEVPPQAWHTISLDFIEGLPRSA 1209

Query: 1164 GYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSHF 1223
             Y  ILVVVD+ SKY HF+ L HP+TA  +A VF+  + +LHG+P  + SDRD IF S F
Sbjct: 1210 HYNCILVVVDKFSKYGHFLPLLHPFTAAKVARVFLDNVYKLHGLPVNIISDRDRIFTSSF 1269

Query: 1224 WSELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFWYN 1283
            W +LF++ GT L MSSSYHP++DGQTE +N+CLE++LRC+    P  WS W+  AE+WYN
Sbjct: 1270 WQQLFQITGTNLSMSSSYHPQSDGQTERLNQCLETFLRCYVHTCPSRWSAWLSVAEYWYN 1329

Query: 1284 STFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVAVALE--LSERDEALKQLRTHLQRAQ 1341
            +T H ++G+TPFEV+YG   P     L  +T V    LE  L ER+   K ++ HL RAQ
Sbjct: 1330 TTVHSTLGRTPFEVLYGH-TPRHFGILV-DTVVPQPELETWLKERELMTKVIKLHLHRAQ 1387

Query: 1342 EQMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVA 1401
            ++M   A+K+R +  F +G+WV+LKL+P+ Q SV  R N KL+ +F+GPFQI D++G+VA
Sbjct: 1388 DRMKRQADKQRSERVFSVGDWVYLKLQPYIQSSVATRSNHKLSFKFFGPFQITDRLGSVA 1447

Query: 1402 YKLKLPVESRIHPVFHVSLLKRAIGNYQ-VQGQLPTDLGIEEATDIYPEAILGTRIIRQG 1460
            Y+L LP  S IHP+FHVS LKR IG  Q    QLP D+G  +     P  IL  R I +G
Sbjct: 1448 YRLALPASSSIHPIFHVSQLKRVIGRDQRASPQLPQDVGPIQV----PTRILQRRFIDRG 1503

Query: 1461 DSEVHQSLIKWKNRSIDDVTWEDNEVLAGQFPEFCLEDKAVSK-EGGIERDSN 1512
               + Q  + W   + D  TWED E L  +FP+  + D+A ++ +G + + S+
Sbjct: 1504 GELIAQVKVVWSGMTEDLATWEDVEALRARFPKALIWDQAGARGQGNVSKASS 1556


>UniRef100_Q60E20 Putative polyprotein [Oryza sativa]
          Length = 1475

 Score =  879 bits (2271), Expect = 0.0
 Identities = 473/1165 (40%), Positives = 683/1165 (58%), Gaps = 33/1165 (2%)

Query: 350  DGETMDEDGEIVMLEEEAEEIEEEETVECK-------LMGVLGCMGEHQTQTMKLAGQVA 402
            D ET +  G+    EEE +E EE  T E +        +      G  +  T  +  ++ 
Sbjct: 322  DKETSNTGGD----EEEKKETEESATSENESPTEELMYISQTAVQGTSRPDTFSVLIKIN 377

Query: 403  NVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHKVVTRGICRGIKAKLGS 462
                + L+DSG++  F+           +    T+ + +  G ++ T  +   I  ++  
Sbjct: 378  GRTAVGLVDSGSTTTFMDQDYALRNYYPLKNTDTKKVVVAGGGELKTDVMVPDISYEIQG 437

Query: 463  IEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGEQVVQLQGMRGKDSYQ 522
               T    +L L G D++LG  W+     + +D K   +    G +V+ LQ     D  +
Sbjct: 438  ECFTNQFKLLPLKGYDIILGADWIYNYSPISLDLKQRILGITKGNKVILLQ-----DFTK 492

Query: 523  SNLHSFLSDTHGREQMEWWGP----QLQVVEAT--KKGHEIPQELRAVLADFHEVFTKKI 576
             N H  +S     + ++        Q+ V+  T  ++GH IP+++  ++  F  V  +  
Sbjct: 493  PNKHFQISGKRLEKMLKKGALGMVIQVNVMSETVEEEGHVIPEDISDIIQQFPAVLKEPK 552

Query: 577  QLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGIIRPSMSSFSSPV 636
             LPP R   H I L     P N+RPYR PH+QKE +E  + EL+E+  I+ S S +SSP 
Sbjct: 553  GLPPKRECDHVINLQSGAVPPNIRPYRVPHYQKEAMENIINELIESKEIQTSDSPYSSPA 612

Query: 637  ILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSKIDLKSGYHQIRV 696
            ++V+KKD SWRMCVDYR LN  T+ +K+P+PI+++LLDELNGA IFSK+DL+SGYHQIR+
Sbjct: 613  VMVRKKDGSWRMCVDYRQLNAQTVKNKFPMPIIEDLLDELNGARIFSKLDLRSGYHQIRM 672

Query: 697  HEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKFVLVFFDDILIYS 756
             E+D+ KT FRTH GHYEY VMPFGL N PATFQ++MN +  P+LR+FVLVFFDDILIYS
Sbjct: 673  AEKDVHKTAFRTHLGHYEYQVMPFGLTNDPATFQSLMNHVLAPFLRRFVLVFFDDILIYS 732

Query: 757  KSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGVSVDPEKVQCIVE 816
            K+  EH +H+KLV+  L  N  V    KC FG A + YLGH+IS  GV+ DP+KV  I  
Sbjct: 733  KTRAEHLEHVKLVMQALQDNHLVIKLKKCAFGLASVSYLGHVISQDGVATDPKKVGKIKN 792

Query: 817  WPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKDNFTWGEEAKQAFHKLKTVM 876
            WP PK+V  VR FLG+TGYYR+FI+ YG + +P+ ++ KK+ F WG +   AF  LK  +
Sbjct: 793  WPTPKDVTDVRKFLGMTGYYRRFIQGYGTICRPIHDMLKKNGFQWGADQTTAFETLKHKL 852

Query: 877  TSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGNLTKSVYEKELMA 936
             +SPVLALPDFD++F +E DA G GIGAVLMQ  +PIA+FSKAL      +S+YEKE MA
Sbjct: 853  RTSPVLALPDFDQAFTIEADACGVGIGAVLMQGGRPIAFFSKALGPKAAGQSIYEKEAMA 912

Query: 937  LVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLGYQFEVKYKPGQE 996
            ++  ++ WRHY+LG    + TD +SLK  + Q++    Q   L KL+ Y + ++YK G+E
Sbjct: 913  ILEALKKWRHYVLGSKLIIKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDYTIEYKSGKE 972

Query: 997  NKAADALSRRGDESDFFS-----LVSFPLW--DDRKKLLEEIASDPYIKNLLQDVQQDPQ 1049
            N  ADALSR   +           V  P W  D ++    ++ +   +   L     DP 
Sbjct: 973  NLVADALSRLPQKEAVADRCHPMTVVIPEWIVDIQRSYENDVQAHKILS--LIGTAADPD 1030

Query: 1050 SKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGFLRTYRRLAESLYWVG 1109
             +  + +  G+L Y+GR+ +   +     L+  YH S  GGHSG   T+ R+    YW G
Sbjct: 1031 RE--YKLEAGLLKYKGRIYVGEATDIRRQLITTYHSSSFGGHSGMRATHHRIKMLFYWHG 1088

Query: 1110 MQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLDFIIGLPKSKGYEAIL 1169
            M+  V  F+R C TCQ  K   +   GLL P  +P+  W  +++DFI GLPKS+G + IL
Sbjct: 1089 MRGEVERFIRECPTCQITKSEHVHIPGLLNPLEIPDMAWTHITMDFIEGLPKSQGKDVIL 1148

Query: 1170 VVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSDRDPIFVSHFWSELFK 1229
            VVVDRL+KY+HFI L HPY  + + E F+  I +LHG+P  + +DRD IF S  + E+FK
Sbjct: 1149 VVVDRLTKYAHFIALAHPYDVEQVVEAFMNNIHKLHGMPMVIITDRDRIFTSSLFQEIFK 1208

Query: 1230 LQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFWVPWAEFWYNSTFHCS 1289
                KL+ S++YHP+ DGQTE +N+CLESYLR      P  W  W+  AE+WYN+TFH +
Sbjct: 1209 AMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQEPHKWYSWLALAEWWYNTTFHTA 1268

Query: 1290 IGQTPFEVVYGRKAPPIIRFLTNETKVVAVALELSERDEALKQLRTHLQRAQEQMASYAN 1349
            I  TPF+ +YG   P I  F           + + E++  L +L+  L  AQ +M  +A+
Sbjct: 1269 IQMTPFKAMYGYSPPQINEFSVPCNISEEARVTIEEKEAILNKLKNSLADAQHRMKYFAD 1328

Query: 1350 KKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQIEDKIGTVAYKLKLPVE 1409
            K R + + ++G+ V+LKL+P+RQ +   R + KL ++FYGPF++  KIG +AYKL+LP +
Sbjct: 1329 KNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKIGQLAYKLQLPDD 1388

Query: 1410 SRIHPVFHVSLLKRAIGNYQVQGQLPTDLGIEEATDIYPEAILGTRIIRQGDSEVHQSLI 1469
            ++IHPVFHVS LK+ +G + +       +G +      P A+L  R++ +    V Q LI
Sbjct: 1389 AQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLI 1448

Query: 1470 KWKNRSIDDVTWEDNEVLAGQFPEF 1494
             W+N S  + TWED  V+   FP F
Sbjct: 1449 LWQNLSPAEATWEDASVIQAMFPSF 1473


>UniRef100_Q947Y5 Putative retroelement [Oryza sativa]
          Length = 1923

 Score =  863 bits (2231), Expect = 0.0
 Identities = 453/970 (46%), Positives = 620/970 (63%), Gaps = 21/970 (2%)

Query: 557  IPQELRAVLADFHEVFTKKIQLPPVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQV 616
            IP  ++ VL  F EVF +  ++PPVR+  H+I L     P+N+RPYR+    K+EIERQV
Sbjct: 36   IPDSIKHVLDRFQEVFQEPTEMPPVRNCDHKIPLMEGASPVNLRPYRHTPALKDEIERQV 95

Query: 617  TELLEAGIIRPSMSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDEL 676
            TE+L++G+I+ S S+FSSP +LVKKKD +WR+C+DY+ LN  TI  KYP+P++DELLDEL
Sbjct: 96   TEMLQSGVIQNSNSAFSSPALLVKKKDGTWRLCIDYKHLNAITIKGKYPLPVIDELLDEL 155

Query: 677  NGAVIFSKIDLKSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDI 736
            +GA  FSK+DL++GYHQIR+   +  KT F+TH+GHYEY VM FGL  APATFQ  MND 
Sbjct: 156  SGAKYFSKLDLRAGYHQIRLQPGEEHKTAFQTHSGHYEYRVMSFGLTGAPATFQKAMNDT 215

Query: 737  FRPYLRKFVLVFFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLG 796
                LRKF LVFFDDILIYS  L  H  HL+ VL +L +  +    SKC F   Q+ YLG
Sbjct: 216  LATVLRKFTLVFFDDILIYSPDLPSHIQHLEQVLQLLQAQQWKVKLSKCSFAQQQLAYLG 275

Query: 797  HIISGAGVSVDPEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKK 856
            HII   GV+ DP K+  ++ W  P++VK +RGFLGL GYYRKF++N+G + KPLT+L KK
Sbjct: 276  HIIGKDGVTTDPSKIADVLHWKIPQSVKQLRGFLGLAGYYRKFVRNFGTINKPLTQLLKK 335

Query: 857  D-NFTWGEEAKQAFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAY 915
               F W  +  +AF+ LK  + S+PVLALPDF K+F VE DA   GIGAVL Q R PIA+
Sbjct: 336  GVPFKWTAQMDEAFNALKQALVSAPVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAF 395

Query: 916  FSKALSNGNLTKSVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQ 975
             SKAL       S YEKE +A++L +  WR YL    F + TDH +L H   Q++ +P Q
Sbjct: 396  VSKALGPKTRGLSTYEKEYLAILLAVDQWRSYLQHDEFVILTDHHNLMHITDQRLHTPLQ 455

Query: 976  QCWLAKLLGYQFEVKYKPGQENKAADALSRRGDE-SDFFSLVS--FPLWDDRKKLLEEIA 1032
                 KL+G Q++V Y+ G  N AADALSRR +E +D    VS   PLW     +++   
Sbjct: 456  HKAFTKLMGLQYKVCYRRGTSNAAADALSRRDEETNDQLWAVSECQPLW--LTAVVKGYE 513

Query: 1033 SDPYIKNLLQDVQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHS 1092
            +D   + LL ++   P ++  F ++QGVL Y+G++ +         L+   H SP GGHS
Sbjct: 514  TDEQAQQLLTELALHPTAREHFHLVQGVLRYKGKIWIGHNLSLQQQLVTALHASPIGGHS 573

Query: 1093 GFLRTYRRLAESLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLS 1152
            GF  TY+R+     W  M++ ++ +V+ C  CQ+ K       GLLQP P+P   W+ +S
Sbjct: 574  GFPVTYQRVKALFAWPQMKKMIQQWVKNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVS 633

Query: 1153 LDFIIGLPKSKGYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVK 1212
            LDFI GLPKS+ Y  ILVVVD+ S+Y+HF+ L HP++A  +A  +++ I +LHG+P  + 
Sbjct: 634  LDFIEGLPKSERYNCILVVVDKFSRYAHFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLI 693

Query: 1213 SDRDPIFVSHFWSELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWS 1272
            SDRD IF S  W  LF   G  L +SS+YHP++DGQT+ +N+CLE +LRCF +  P  W 
Sbjct: 694  SDRDKIFTSKLWEFLFLKSGIALHLSSAYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWV 753

Query: 1273 FWVPWAEFWYNSTFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVA-VALELSERDEALK 1331
             W+  A +WYN+ FH ++ +TPFEV+YG    P+   +T ET  +  +A+ L ER    +
Sbjct: 754  TWLHLAGYWYNTCFHSALNKTPFEVLYGHN--PLQLGVTMETCAIPDLAVWLHERKLMAE 811

Query: 1332 QLRTHLQRAQEQMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPF 1391
             L+ HL R Q++M  +A+K R    F +G+WVFLKL+P+ Q SV  R   KLA +FYGPF
Sbjct: 812  LLQQHLHRVQQKMKFHADKNRSFREFAVGDWVFLKLQPYVQKSVASRACHKLAFKFYGPF 871

Query: 1392 QIEDKIGTVAYKLKLPVESRIHPVFHVSLLKRAIG-NYQVQGQLPTDLGIEEATDIYPEA 1450
            QI  ++GTVAYKL+LP +S IHPVFHVS LK A G  +QVQ +LP  L     + +YP  
Sbjct: 872  QILARVGTVAYKLQLPDDSTIHPVFHVSQLKVAHGFKHQVQSRLPKFL----KSTVYPLQ 927

Query: 1451 ILGTRIIRQGDSEVHQSLIKWKNRSIDDVTWEDNEVLAGQFPEFCLEDKAVSKEGGI--- 1507
            IL  R+IR+G+  V Q L+ W +   +D TWED E L  +FP      +A  +  G+   
Sbjct: 928  ILDQRLIRKGNRTVSQVLVYWSDSVAEDATWEDREDLQQRFPMALAWGQATFQGEGVVKI 987

Query: 1508 ----ERDSNT 1513
                E+++NT
Sbjct: 988  FPDGEQENNT 997


>UniRef100_Q8W150 Polyprotein [Oryza sativa]
          Length = 933

 Score =  836 bits (2159), Expect = 0.0
 Identities = 434/882 (49%), Positives = 577/882 (65%), Gaps = 18/882 (2%)

Query: 619  LLEAGIIRPSMSSFSSPVILVKKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNG 678
            +L+ GII+ S S FSSP +LVKKKD SWR+C+DYR LN  T    YP+PI+DELLDEL G
Sbjct: 1    MLQNGIIQHSSSPFSSPALLVKKKDGSWRVCIDYRQLNAITKKGTYPMPIIDELLDELAG 60

Query: 679  AVIFSKIDLKSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFR 738
            A IFSK+DL++GYHQIR+ E +  KT F+TH+GHYEY VM FGL  APATFQ  MND  R
Sbjct: 61   AKIFSKLDLRAGYHQIRMAEGEEFKTAFQTHSGHYEYKVMSFGLTGAPATFQGAMNDTLR 120

Query: 739  PYLRKFVLVFFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHI 798
            P LRK  LVFFDDILIYS  +  H DHLK VL +L ++ +    SKC F   QI YLGHI
Sbjct: 121  PLLRKCALVFFDDILIYSPDMNSHLDHLKQVLQLLDTHQWKVKLSKCDFAQTQISYLGHI 180

Query: 799  ISGAGVSVDPEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKKD- 857
            ISG GVS DP K+Q IV+W  P  +K +RGFLGL GYYRKF+K++G ++KPLT+L KKD 
Sbjct: 181  ISGQGVSTDPSKIQSIVDWAVPTTLKKLRGFLGLAGYYRKFVKDFGTLSKPLTQLLKKDA 240

Query: 858  NFTWGEEAKQAFHKLKTVMTSSPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFS 917
             F W  E  QAF  LK  +TS+PVLALP+F + F +E DA+  GIGAVL Q + P+A+ S
Sbjct: 241  PFVWSAEVNQAFQALKHALTSTPVLALPNFQQGFTIETDASDIGIGAVLSQNQHPVAFVS 300

Query: 918  KALSNGNLTKSVYEKELMALVLCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQC 977
            KAL       S YEKE +A+++ + HWR YL  + F + TDH SL H  +Q++ +P QQ 
Sbjct: 301  KALGPRTQGLSTYEKECLAIMMAVDHWRPYLQFQEFLIITDHHSLMHLTEQRLHTPWQQK 360

Query: 978  WLAKLLGYQFEVKYKPGQENKAADALSRRGDE--SDFFSL-VSFPLWDDRKKLLEEIASD 1034
               KL G QF++ Y+ G+ N AADALSR   E  S+F  +    P+W   + +L     D
Sbjct: 361  AFTKLSGLQFQIVYRKGKHNAAADALSRHVPEETSEFLGISTCSPVW--LQDILHGYDQD 418

Query: 1035 PYIKNLLQDVQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWLLQEYHGSPTGGHSGF 1094
            P   +LL  +  +P S P +S+ +G++ ++G++ +   S     ++   H SP GGHSGF
Sbjct: 419  PLALSLLTGLAVNPSSYPHYSLSKGLIKHKGKVWVGNNSNIQQQIISALHDSPLGGHSGF 478

Query: 1095 LRTYRRLAESLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSLD 1154
              TY+R+     W  M+ TV+  + +C  C + K       GLLQP PVP+  W+ +S+D
Sbjct: 479  PVTYKRIKSLFSWPHMKLTVQKQLASCAVCLQAKPDRSKYPGLLQPLPVPDGAWQIISMD 538

Query: 1155 FIIGLPKSKGYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVKSD 1214
            FI GLPKS   + ILVVVD+ SKY+HF+ L HP++A  +A+VF+  + +LHG+P  + SD
Sbjct: 539  FIEGLPKSYHQDCILVVVDKFSKYAHFMPLSHPFSALDVAKVFMLNVYKLHGLPQIIISD 598

Query: 1215 RDPIFVSHFWSELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWSFW 1274
            RD IF S  W +LF   GTKL +SS+YHP++DGQTE +N+CLE +LRCF    P  WS W
Sbjct: 599  RDKIFTSALWEQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCFVHATPAKWSLW 658

Query: 1275 VPWAEFWYNSTFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVA-VALELSERDEALKQL 1333
            +  AEFWYNS++H ++ +TPFEV+YG   PP    +  +  V++ +   LSER    + L
Sbjct: 659  LHLAEFWYNSSYHSALNKTPFEVLYG--YPPSHFGIRADACVISDLDSWLSERHLMTQLL 716

Query: 1334 RTHLQRAQEQMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQKLAARFYGPFQI 1393
            R HL RAQ+ M + A+KKR   SF +G+WVFLKL+P+ Q SV KR N KL+ R++GP+QI
Sbjct: 717  RQHLNRAQQVMKTQADKKRSFRSFQVGDWVFLKLQPYVQSSVAKRANHKLSFRYFGPYQI 776

Query: 1394 EDKIGTVAYKLKLPVESRIHPVFHVSLLKRAIG-NYQVQGQLPTDLGIEEATD--IYPEA 1450
              K+G+VAYKL+LP +S +HPVFHVS LK      + +Q QLP        TD   YP  
Sbjct: 777  LSKVGSVAYKLQLPADSMVHPVFHVSQLKGTQNFKHSIQSQLP------NITDHIQYPVQ 830

Query: 1451 ILGTRIIRQGDSEVHQSLIKWKNRSIDDVTWEDNEVLAGQFP 1492
            IL TRI ++G+  V Q L+ W N    + TWED E L  +FP
Sbjct: 831  ILDTRIQKKGNKVVRQILVCWSNLPAVEATWEDEEELKQRFP 872


>UniRef100_Q75LZ2 Putative gag-pol polyprotein [Oryza sativa]
          Length = 1377

 Score =  782 bits (2019), Expect = 0.0
 Identities = 436/1074 (40%), Positives = 624/1074 (57%), Gaps = 110/1074 (10%)

Query: 364  EEEAEEIEEEETVECKLMGVLGCMGEHQTQTMKLAGQVANVELLILIDSGASHNFISPKI 423
            E++A    E+       M V    G     T++L G++  + +L+L+DSG+  +FIS ++
Sbjct: 406  EDQASISSEDSDSSLLAMSVHAVQGTDSQSTIRLQGKIQGLNILMLVDSGSLASFISDQL 465

Query: 424  TSALGLVITPITTRSIKLGDGHKVVTRGICRGIKAKLGSIEITIDALVLELGGLDLVLGV 483
               L  V       S+K+ +G  +  +      +  +   +      V+ LGG D +LG+
Sbjct: 466  ADRLTGVQFLAHPLSVKVANGQVLHCQKEMPSAEWFVSGQKFLTTFKVVALGGYDAILGM 525

Query: 484  SWLSTLGKVIMDWKLLTMQFVYGEQVVQLQGMRGKDSYQSNLHSFLSDTHGREQMEWWGP 543
             WL+    + +DW                                               
Sbjct: 526  DWLTKYSPMQIDW----------------------------------------------- 538

Query: 544  QLQVVEATKKGHEIPQELRAVLADFHE---VFTKKIQLPPVRSRVHQITLNPEHGPINVR 600
            QL+ +  T  GHE+   LR V +D  +   + ++ +Q       +H I    +   +NVR
Sbjct: 539  QLKSIHLTVMGHEVL--LRGVQSDTSDCALISSQHLQ------HLHSI----DSVAVNVR 586

Query: 601  PYRYPHHQKEEIERQVTELLEAGIIRPSMSSFSSPVILVKKKDKSWRMCVDYRALNKATI 660
            PYRY   QK+EIE+QV ++L+ GII+PS S FSSPV+LVKKKD +WR CVDYR LN  T+
Sbjct: 587  PYRYTPAQKDEIEKQVKDMLQKGIIQPSASPFSSPVLLVKKKDGTWRFCVDYRHLNAITV 646

Query: 661  PDKYPIPIVDELLDELNGAVIFSKIDLKSGYHQIRVHEEDIPKTTFRTHNGHYEYLVMPF 720
             +KYP+PI+DEL+DEL GA  FSK+DL+SGYHQIR+   +  KT F+THNGH+E+ V+PF
Sbjct: 647  KNKYPLPIIDELMDELAGACWFSKLDLRSGYHQIRMAVGEEAKTAFKTHNGHFEFKVLPF 706

Query: 721  GLMNAPATFQAIMNDIFRPYLRKFVLVFFDDILIYSKSLLEHRDHLKLVLTVLLSNSFVA 780
            GL +APATFQ +MN +    LR+ VLVF DDIL+YS++L EH++HL+ V           
Sbjct: 707  GLTSAPATFQGVMNTVLADQLRQNVLVFVDDILVYSRTLEEHKNHLRQV----------- 755

Query: 781  NQSKCKFGCAQIDYLGHIISGAGVSVDPEKVQCIVEWPEPKNVKGVRGFLGLTGYYRKFI 840
                        + L HIIS  GVS DPEK+Q + +WP P +VK VR FLGL GYYRKF+
Sbjct: 756  -----------FETLRHIISADGVSTDPEKIQVVRQWPVPVSVKDVRSFLGLAGYYRKFV 804

Query: 841  KNYGKMAKPLTE-LTKKDNFTWGEEAKQAFHKLKTVMTSSPVLALPDFDKSFEVECDAAG 899
            +++G ++KPLT+ L K   F W +  ++AF  LK  + S+PVL +PDF K F VE DA+ 
Sbjct: 805  RHFGIISKPLTKLLCKGQPFIWTQHHQEAFDTLKQSLISAPVLVMPDFQKMFVVETDASD 864

Query: 900  RGIGAVLMQQRQPIAYFSKALSNGNLTKSVYEKELMALVLCIQHWRHYLLGKAFTVYTDH 959
            RGIGAVLMQ +  +A+ SKAL +     S YEKE +A++L + HWR YL    F + TDH
Sbjct: 865  RGIGAVLMQDQHSVAFLSKALGHRTQVLSTYEKESLAIILAVDHWRPYLQHDDFLIRTDH 924

Query: 960  KSLKHFLQQKISSPDQQCWLAKLLGYQFEVKYKPGQENKAADALSRR-GDESDFFSLVSF 1018
            +SL     Q +++  Q   + KLLG ++ + YK G EN AADALS R  D     S +S 
Sbjct: 925  RSLAFLDNQLLTTSWQYKAMTKLLGLRYRIVYKKGLENGAADALSHRSSDGLPILSALSV 984

Query: 1019 PLWDDRKKLLEEIASDPYIKNLLQDVQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPW 1078
             L D  + ++    SDP    LL   ++       F +  G+L ++ R+ +         
Sbjct: 985  GLPDWLQDVVSGYKSDPEALQLLHSFKEGTCHSAHFELQNGILYFKKRVWVGNNRQLQQQ 1044

Query: 1079 LLQEYHGSPTGGHSGFLRTYRRLAESLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLL 1138
            +L   H +  GGHSG                    ++DFV++C  CQ+ K   +   GLL
Sbjct: 1045 VLANLHTAALGGHSG--------------------IQDFVQSCAVCQQAKPEHVPYPGLL 1084

Query: 1139 QPFPVPNAVWEDLSLDFIIGLPKSKGYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFV 1198
            QP  +P   W+ +S+DFI GLP+S  Y +ILV+VD+ +K++HF+ L HP+TA S+A++F+
Sbjct: 1085 QPVQIPEHAWQVISMDFIEGLPRSASYNSILVIVDKFTKFAHFLPLSHPFTAVSVAQLFM 1144

Query: 1199 REIVRLHGIPNTVKSDRDPIFVSHFWSELFKLQGTKLKMSSSYHPETDGQTEVINRCLES 1258
              I  +HG+P  + SDRD +F S FW ELF+  GT+L+MSSSYHP+TDGQTE +N+CLE 
Sbjct: 1145 DRIHSIHGLPQAIISDRDRVFTSIFWKELFRRSGTQLQMSSSYHPQTDGQTERVNQCLEM 1204

Query: 1259 YLRCFASDHPKTWSFWVPWAEFWYNSTFHCSIGQTPFEVVYGRKAPPIIRFLTNETKVVA 1318
            +LRCF    P  WS W+  A+FWYN++FH ++  TPFE ++G K  P    L+ ++  V 
Sbjct: 1205 FLRCFVHACPSRWSKWLSLAQFWYNTSFHSTLMLTPFEAMFGHK--PRHFGLSVDSVGVP 1262

Query: 1319 VALE--LSERDEALKQLRTHLQRAQEQMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVV 1376
             AL+  + +R      +  HL RAQ++M S A+ KR D  F +G+WVF+KL+P+ Q SV+
Sbjct: 1263 SALDSWMQDRHNMQSLIYHHLVRAQQRMKSQADSKRTDRVFAVGDWVFMKLQPYVQQSVM 1322

Query: 1377 KRINQKLAARFYGPFQIEDKIGTVAYKLKLPVESRIHPVFHVSLLKRAIGNYQV 1430
             R NQKLA +FYGPFQI  ++G+VAYKL+LP  S IHPV HVS LK+A+   +V
Sbjct: 1323 TRANQKLAFKFYGPFQILQRVGSVAYKLQLPATSLIHPVVHVSQLKKAVAASEV 1376


>UniRef100_Q8LLZ2 Putative retroelement [Oryza sativa]
          Length = 1786

 Score =  754 bits (1948), Expect = 0.0
 Identities = 439/1129 (38%), Positives = 641/1129 (55%), Gaps = 75/1129 (6%)

Query: 401  VANVELLILIDSGASHNFISPKITSALGLVITPITTRSIKLGDGHKVVTRGICRGIKAKL 460
            V ++   IL DSGASH+FIS        L +  +    +    G  +  +     +  ++
Sbjct: 683  VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 742

Query: 461  GSIEITIDALVLELGGLDLVLGVSWLSTLGKVIMDWKLLTMQFVYGEQVVQLQGMRGKDS 520
              I    D ++L+   LD++LG++WL+    V+ D    T+    G +            
Sbjct: 743  QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV-DCARRTVTLYRGPE------------ 789

Query: 521  YQSNLHSFLSDTHGREQMEWWGPQLQVVEATKKGHEIPQELRAVLADFHEVFTKKIQ-LP 579
                           + + ++ P   V   + K H+I      ++ +F +VF +++  +P
Sbjct: 790  ---------------QPVVFFAPPTSV--RSSKLHQIELSEIPIVREFGDVFPEELPGMP 832

Query: 580  PVRSRVHQITLNPEHGPINVRPYRYPHHQKEEIERQVTELLEAGIIRPSMSSFSSPVILV 639
            P R    +I L P   P++ RPYR   ++  E+++Q+ EL E G IRPS S + +PVI V
Sbjct: 833  PKREIEFRIDLAPGTTPLHKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPWGAPVIFV 892

Query: 640  KKKDKSWRMCVDYRALNKATIPDKYPIPIVDELLDELNGAVIFSKIDLKSGYHQIRVHEE 699
            +KKDK+ RMCVDYRALN+ TI +KYP+P +D+L D+L GA +FSKIDL+SGYHQ+R+ EE
Sbjct: 893  EKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREE 952

Query: 700  DIPKTTFRTHNGHYEYLVMPFGLMNAPATFQAIMNDIFRPYLRKFVLVFFDDILIYSKSL 759
            DIPKT F T  G YE+ VM FGL NAPA F  +MN +F  YL KFV+VF DDILIYS+S 
Sbjct: 953  DIPKTAFTTRYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSQSE 1012

Query: 760  LEHRDHLKLVLTVLLSNSFVANQSKCKFGCAQIDYLGHIISGAGVSVDPEKVQCIVEWPE 819
             +H+ HL+LVL  L  +   A  SKC+F  +++ +LGH+IS  GV+VDPE V  + EW +
Sbjct: 1013 EDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTEWKQ 1072

Query: 820  PKNVKGVRGFLGLTGYYRKFIKNYGKMAKPLTELTKK-DNFTWGEEAKQAFHKLKTVMTS 878
            PK V  +R FLGL GYYR+FI+N+ K+A+P+T+L KK + F W  + ++AF  LK  + S
Sbjct: 1073 PKTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVS 1132

Query: 879  SPVLALPDFDKSFEVECDAAGRGIGAVLMQQRQPIAYFSKALSNGNLTKSVYEKELMALV 938
            SPVL LPD  K F V CDA+ +G+G VLMQ    +AY S+ L         ++ EL A+V
Sbjct: 1133 SPVLILPDTRKDFMVYCDASRQGLGCVLMQDGHVVAYASRQLRPHEGNYPTHDLELAAVV 1192

Query: 939  LCIQHWRHYLLGKAFTVYTDHKSLKHFLQQKISSPDQQCWLAKLLGYQFEVKYKPGQENK 998
              ++ WRHYL+G    +YTDHKSLK+   Q   +  Q+ WL  +  Y   + Y PG+ N 
Sbjct: 1193 HALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANV 1252

Query: 999  AADALSRRGD-----------------ESDFFSLVS---FPLWDDRKKLLEEI----ASD 1034
             ADALSR+                   E+   S+V        + +  LL++I     +D
Sbjct: 1253 VADALSRKSHCNTLNVRGIPPELNQQMEALNLSIVGRGFLAALEAKPTLLDQIREAQKND 1312

Query: 1035 PYIKNLLQDVQQDPQSKPGFSVLQGVLLYQGRLVLSPTSPSIPWL-LQEYHGSPTGGHSG 1093
            P +  LL++++Q   +  GF+  +   L+ G+ V  P S  +  L LQE H SP   H G
Sbjct: 1313 PDMHGLLKNMRQGKAA--GFTEDEHGTLWNGKRVCVPDSRELKQLILQEAHESPYSIHPG 1370

Query: 1094 FLRTYRRLAESLYWVGMQRTVRDFVRACDTCQRQKYSAMSPGGLLQPFPVPNAVWEDLSL 1153
              + Y  L E  +WV M+R + +FV  CD CQR K     P GLLQP  VP   W+++ +
Sbjct: 1371 STKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGM 1430

Query: 1154 DFIIGLPKSK-GYEAILVVVDRLSKYSHFILLKHPYTAKSIAEVFVREIVRLHGIPNTVK 1212
            DFI GLPK++ GY++I V+VDRL+K + FI +K  Y    +AE++   IV LHGIP  + 
Sbjct: 1431 DFITGLPKTQGGYDSIWVIVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGIPKKIV 1490

Query: 1213 SDRDPIFVSHFWSELFKLQGTKLKMSSSYHPETDGQTEVINRCLESYLRCFASDHPKTWS 1272
            SDR   F SHFW +L +  GT+L  S++YHP+TDGQTE +N+ LE  LR    D  KTW 
Sbjct: 1491 SDRGSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLRACVLDFGKTWD 1550

Query: 1273 FWVPWAEFWYNSTFHCSIGQTPFEVVYGRKA-PPIIRFLTNETKVVAVALELSERDEALK 1331
              +P+AEF YN+++  SI   P+E +YGRK   P++     E++V    + L E +  ++
Sbjct: 1551 KSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTPLLWDQVGESQVFGTDI-LREAEAKVR 1609

Query: 1332 QLRTHLQRAQEQMASYANKKRRDLSFDIGEWVFLKLRPHRQHSVVKRINQ--KLAARFYG 1389
             +R +L+ AQ +  SYA+ +RRDL F + ++V+L++ P R    V R     KLA R+ G
Sbjct: 1610 IIRDNLKVAQSRQKSYADNRRRDLEFAVDDFVYLRVTPLRG---VHRFQTKGKLAPRYVG 1666

Query: 1390 PFQIEDKIGTVAYKLKLPVE-SRIHPVFHVSLLKRAIGNYQVQGQLPTDLGIEEATDI-- 1446
            PF+I  + G VAY+L+LP     +H VFHVS LKR +   +V  +      IE   D+  
Sbjct: 1667 PFRIIARRGEVAYQLELPASLGNVHDVFHVSQLKRCL---RVPSEQADSEQIEVREDLTY 1723

Query: 1447 --YPEAILGTRIIRQGDSEVHQSLIKWKNRSIDDVTWEDNEVLAGQFPE 1493
               P  IL TR  R  +  +    ++W N + ++ TWE  + L    P+
Sbjct: 1724 VERPVKILDTRERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPD 1772


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.324    0.140    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,597,605,663
Number of Sequences: 2790947
Number of extensions: 112340985
Number of successful extensions: 341756
Number of sequences better than 10.0: 29731
Number of HSP's better than 10.0 without gapping: 3083
Number of HSP's successfully gapped in prelim test: 26648
Number of HSP's that attempted gapping in prelim test: 281178
Number of HSP's gapped (non-prelim): 50760
length of query: 1543
length of database: 848,049,833
effective HSP length: 141
effective length of query: 1402
effective length of database: 454,526,306
effective search space: 637245881012
effective search space used: 637245881012
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 82 (36.2 bits)